FvH4_2g04200

dnaJ homolog subfamily C member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
3286021 .. 3289449
3429 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g04200.t1

Sequence Viewer

Length: 2325 bp
ATGTCTTCCCCTTCCGTCTTCAATTTCAAGAACTTTGCACCCGGTGAGGACAGCCCCTCACAATCACATCAAGTGAGGTCGAGAACTGGATCGGGTCAGAATGGCGCAGAGGCCAACCCGTTTTCCTCGGTAAGTGATGGTTTTAGCAATATGGAAATTGATAATGATATTTGCTATGTGTTTGGTTCTAGTCGTATTGATTCTAAATCAAATTTTAATTCAGGAGGGCATCATATGGGCGAAGGCAATGTGGTTTCTAAAGTTTGCATGGAATCTGAGAAAGTAGAAACCAGTGCTTGCAATGTAGCCAAGTGTCAGGGTGATAATGTAACCGCTGTTTATAGTAGTAATAGTACTACTGCAAATAACTGTGGAAGTAGAGACCGTGACAACTTATTTGCATCAGGTTTTGAAGATATGAAGAGGAAAGCTTTTCGATTTTCTGTGGATGGTAGTTCAGTTAGGGCAAAGCCTCATCGACAACGTAGAGAGAAGAGTAGAACGAAAAATAAGAAGAAAGTTATTGGTCATCATGATGTATTGGTTATATCTCCCAATGTCACGAATGTCACTACTTATGCTAGGCATGGTAACTGTCAAGCCTGTGCGGAGTTTAGAACCAAGGGATACGAAGCTCATTGCAATAATGATTTCTTAATAGCACAACAGTATTACACACTGGGAATAGAATCTCTACGTGCAAGTGAAAGATCATGCTGCCTCAAGCGTCTTTCGCAATGCTATAGCGATCGTGCAGCAGCAAGGGTGTCTCTGGGAAGGATAAGGGAAACTTTAGCGGATGCTTTGATGGCTATTCAACTGGACCCCGGAGTTGTAATAGATTGTGTTGATGGCATAAAAAAGGCTCACAAAGTGGCTGAGTGTACAAATCGTTCCGCCTCGCTTCTGGAAAAGAGAACTGCTGATGCTGCTCTTAGTGCCTTTGGAATAATTTCTGAGGCTTTGTGTGTTAGTACATACTCGGAAAAGTTACTTGAAATGAAAGCAGACACACTGTATTTGTTAAGGAGGTATGAAGAGGCAATTCAAGTGTGTGAACAAAGTATCAATTTTGCGGAAATTAATTCTTTTCGTGTAGAAAATATGGACGGTACTTCTGGATCTGAAAATTACCTATTTGCTAGGTTGTGGAGGTTGATTTTCATTTCCAAAACTAACTTTCAGCTGGGAAGGTATAGGGAAGCTCTTTGTTTCGTGGAGCAAGTGAGATCTATGAAAGACGAGTATGGAAGTAAGAATATGGAATCATCAATGTCAGCAGCTGTCACTATAAGTGAACTGTTAAACCACAAGATTGCAGGTAATGAAGCGTTTAAAGCAGGAAGATATACAGAAGCCGCGGAGCATTATACTACTGCTTTATCAAGCAATATCGGTTCTCGCCCATTTGCGGCAATTTGTTTGTGCAACCGTGCTGCAGCACACCAAGCTTTAGGTCAAATTATGGATGCCATTGCAGATTGCAGTCTTGCAATAGCTCTTGATGAAAATTATGGTAAGGCAGTTTCTAGAAGAGCTACCTTGCATGAGATGATACGCGACTATGTACATGCTTCTAGTGATGTCCAAAGGCTTGCTCGTCGACGCTTGCCATCACTTAATGAAAAGGCTAAGAAAGGAATCCCCTTGAATTTCAACCTCATTTTGGGGATTAAACCATCTGACACAAATTCTAATATCAAGAAAGCGTACCGCATGGCAGCTCTCAAACATCATCCTGACAAGGCTGGCCAGTTCTTGGGTAGAAGTGAAAACCGAGATGAAGAGCTACTGTGGAAGGAAATCTCGGCGGAGGTTCAGAAAGATGCTGACAAGCTATTTAAAATGATTGGAGAAGCTTATGCAGTACTATCAGACCCGAGCAAGCGCTCAAAATATGATTTTGAGGAGGACATGAGAAAAGCAGCAAATGAAAGGAAGGAACAACGCAATTTTAGAGAACGTTCAGATTTTCATAGTCCATACAGCAGTTACAGACCTTCCGATTTTCAAAGTACTAAAACAACCAGCAGTTTTGGGAAGCCTTCATACTCTGGGTGTCCAAGCAGATCCAGTAGTCATAGAAGATATGGTCGTAGGTCCCCCTTTGAGAGAACATGTCCGGATGAAAGAGAAAGTTGGAAGTCATATGACCCTGAAGGAAAGGAGATTGATGATGATGATGATCCCGAGGGTCCTCAAGAGATCGAGGCCTTACAGCAGATGGGTCGACACAAAGCTTCCGGACCTCCCCAGAGACATCCTTGTCGATATCATTCTGAGATTGCCTCTGAAATCAATTTGTTCCCTCCAATGTGCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

775

Amino Acids

86.62

Weight (kDa)

8.52

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 555 - 583 2.9e-07 DnaJ domain
DnaJ PF00226 607 - 634 1e-05 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2265
Acc36I ACCTGC 1 cut(s) 1310
AccB7I CCANNNNNTGG 1 cut(s) 1759
AccI GTMKAC 2 cut(s) 1603, 2230
AccII CGCG 2 cut(s) 1361, 1560
AccIII TCCGGA 2 cut(s) 2122, 2243
AclI AACGTT 1 cut(s) 1963
AclWI GGATC 4 cut(s) 97, 1129, 2064, 2180
AcoI YGGCCR 1 cut(s) 1750
AcsI RAATTY 3 cut(s) 211, 1651, 1690
AcuI CTGAAG 1 cut(s) 2178
AdeI CACNNNGTG 2 cut(s) 44, 874
AfaI GTAC 8 cut(s) 355, 886, 976, 1114, 1569, 1712, 1869, 2017
AfeI AGCGCT 1 cut(s) 1889
AfiI CCNNNNNNNGG 3 cut(s) 1411, 1666, 1759
AflIII ACRYGT 1 cut(s) 2117
AgsI TTSAA 9 cut(s) 22, 28, 413, 818, 998, 1049, 1651, 1657, 2012
Alw26I GTCTC 3 cut(s) 375, 774, 2251
AlwI GGATC 4 cut(s) 97, 1129, 2064, 2180
AlwNI CAGNNNCTG 1 cut(s) 1283
Ama87I CYCGRG 2 cut(s) 1879, 2189
Aor13HI TCCGGA 2 cut(s) 2122, 2243
Aor51HI AGCGCT 1 cut(s) 1889
AoxI GGCC 3 cut(s) 111, 1750, 2211
ApeKI GCWGC 9 cut(s) 717, 755, 758, 929, 1280, 1436, 1439, 1721, 1925
ApoI RAATTY 3 cut(s) 211, 1651, 1690
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
AseI ATTAAT 1 cut(s) 1083
Asp700I GAANNNNTTC 1 cut(s) 952
AspLEI GCGC 2 cut(s) 107, 1890
AspS9I GGNCC 4 cut(s) 823, 2100, 2195, 2246
AsuC2I CCSGG 2 cut(s) 42, 828
AsuHPI GGTGA 2 cut(s) 56, 332
AvaI CYCGRG 2 cut(s) 1879, 2189
AvaII GGWCC 4 cut(s) 823, 2100, 2195, 2246
BalI TGGCCA 1 cut(s) 1752
BarI GAAGNNNNNNTAC 2 cut(s) 2033, 2065
BbsI GAAGAC 1 cut(s) 10
BbvI GCAGC 9 cut(s) 704, 767, 770, 916, 1292, 1423, 1451, 1733, 1937
BccI CCATC 7 cut(s) 131, 443, 802, 845, 1621, 1687, 2218
BcgI CGANNNNNNTGC 2 cut(s) 2210, 2244
BciVI GTATCC 1 cut(s) 620
BcnI CCSGG 2 cut(s) 42, 828
BcoDI GTCTC 3 cut(s) 375, 774, 2251
BfaI CTAG 5 cut(s) 189, 582, 1143, 1530, 1578
BfmI CTRYAG 2 cut(s) 742, 1437
BfoI RGCGCY 1 cut(s) 1891
BfuAI ACCTGC 1 cut(s) 1310
BfuI GTATCC 1 cut(s) 620
BglII AGATCT 1 cut(s) 1229
BmcAI AGTACT 3 cut(s) 355, 1869, 2017
Bme1390I CCNGG 2 cut(s) 42, 828
Bme18I GGWCC 4 cut(s) 823, 2100, 2195, 2246
BmeT110I CYCGRG 2 cut(s) 1879, 2189
BmgT120I GGNCC 4 cut(s) 823, 2100, 2195, 2246
BmiI GGNNCC 3 cut(s) 825, 2102, 2196
BmrFI CCNGG 2 cut(s) 42, 828
BmrI ACTGGG 1 cut(s) 689
BmsI GCATC 6 cut(s) 238, 410, 790, 916, 1459, 1816
BmuI ACTGGG 1 cut(s) 689
BpiI GAAGAC 1 cut(s) 10
BplI GAGNNNNNCTC 2 cut(s) 2273, 2305
BpuEI CTTGAG 2 cut(s) 707, 2184
BpuMI CCSGG 2 cut(s) 42, 828
BsaAI YACGTR 1 cut(s) 698
BsaBI GATNNNNATC 1 cut(s) 2184
BsaI GGTCTC 1 cut(s) 375
BsaJI CCNNGG 5 cut(s) 126, 621, 826, 1359, 2190
BsaWI WCCGGW 2 cut(s) 2122, 2243
Bsc4I CCNNNNNNNGG 3 cut(s) 1411, 1666, 1759
Bse1I ACTGG 6 cut(s) 91, 291, 684, 825, 1753, 2073
Bse3DI GCAATG 5 cut(s) 253, 307, 637, 743, 1473
Bse8I GATNNNNATC 1 cut(s) 2184
BseAI TCCGGA 2 cut(s) 2122, 2243
BseDI CCNNGG 5 cut(s) 126, 621, 826, 1359, 2190
BseGI GGATG 6 cut(s) 454, 805, 1474, 1735, 2131, 2260
BseJI GATNNNNATC 1 cut(s) 2184
BseLI CCNNNNNNNGG 3 cut(s) 1411, 1666, 1759
BseMI GCAATG 5 cut(s) 253, 307, 637, 743, 1473
BseMII CTCAG 4 cut(s) 267, 870, 948, 2271
BseNI ACTGG 6 cut(s) 91, 291, 684, 825, 1753, 2073
BseRI GAGGAG 1 cut(s) 1922
BseXI GCAGC 9 cut(s) 704, 767, 770, 916, 1292, 1423, 1451, 1733, 1937
BseYI CCCAGC 1 cut(s) 1186
BsgI GTGCAG 1 cut(s) 774
Bsh1236I CGCG 2 cut(s) 1361, 1560
Bsh1285I CGRYCG 1 cut(s) 751
BshFI GGCC 3 cut(s) 113, 1752, 2213
BsiEI CGRYCG 1 cut(s) 751
BsiHKCI CYCGRG 2 cut(s) 1879, 2189
BsiSI CCGG 4 cut(s) 42, 828, 2123, 2244
BslFI GGGAC 1 cut(s) 2086
BslI CCNNNNNNNGG 3 cut(s) 1411, 1666, 1759
BsmAI GTCTC 3 cut(s) 375, 774, 2251
BsmFI GGGAC 1 cut(s) 2086
BsnI GGCC 3 cut(s) 113, 1752, 2213
Bso31I GGTCTC 1 cut(s) 375
BsoBI CYCGRG 2 cut(s) 1879, 2189
Bsp13I TCCGGA 2 cut(s) 2122, 2243
Bsp1407I TGTACA 2 cut(s) 884, 1567
Bsp143I GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
BspANI GGCC 3 cut(s) 113, 1752, 2213
BspCNI CTCAG 4 cut(s) 268, 871, 949, 2272
BspEI TCCGGA 2 cut(s) 2122, 2243
BspFNI CGCG 2 cut(s) 1361, 1560
BspHI TCATGA 1 cut(s) 532
BspLI GGNNCC 3 cut(s) 825, 2102, 2196
BspMAI CTGCAG 1 cut(s) 1441
BspMI ACCTGC 1 cut(s) 1310
BspPI GGATC 4 cut(s) 97, 1129, 2064, 2180
BspQI GCTCTTC 2 cut(s) 1528, 1779
BspTNI GGTCTC 1 cut(s) 375
BsrDI GCAATG 5 cut(s) 253, 307, 637, 743, 1473
BsrGI TGTACA 2 cut(s) 884, 1567
BsrI ACTGG 6 cut(s) 91, 291, 684, 825, 1753, 2073
BssECI CCNNGG 5 cut(s) 126, 621, 826, 1359, 2190
BssMI GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
BssT1I CCWWGG 1 cut(s) 621
Bst4CI ACNGT 9 cut(s) 371, 386, 596, 669, 1017, 1112, 1302, 1433, 1794
Bst6I CTCTTC 5 cut(s) 416, 488, 1032, 1528, 1779
BstAUI TGTACA 2 cut(s) 884, 1567
BstBAI YACGTR 1 cut(s) 698
BstC8I GCNNGC 5 cut(s) 298, 1596, 1610, 1750, 1886
BstDEI CTNAG 6 cut(s) 276, 879, 935, 957, 1632, 2280
BstDSI CCRYGG 1 cut(s) 1359
BstF5I GGATG 6 cut(s) 454, 805, 1474, 1735, 2131, 2260
BstFNI CGCG 2 cut(s) 1361, 1560
BstH2I RGCGCY 1 cut(s) 1891
BstHHI GCGC 2 cut(s) 107, 1890
BstKTI GATC 8 cut(s) 92, 713, 751, 1124, 1232, 2072, 2188, 2208
BstMAI GTCTC 3 cut(s) 375, 774, 2251
BstMBI GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
BstMCI CGRYCG 1 cut(s) 751
BstMWI GCNNNNNNNGC 6 cut(s) 733, 809, 929, 938, 1337, 1448
BstNSI RCATGY 2 cut(s) 1574, 2121
BstSCI CCNGG 2 cut(s) 40, 826
BstSFI CTRYAG 2 cut(s) 742, 1437
BstUI CGCG 2 cut(s) 1361, 1560
BstV1I GCAGC 9 cut(s) 704, 767, 770, 916, 1292, 1423, 1451, 1733, 1937
BstV2I GAAGAC 1 cut(s) 10
BstX2I RGATCY 3 cut(s) 1121, 1229, 2069
BstYI RGATCY 3 cut(s) 1121, 1229, 2069
BsuI GTATCC 1 cut(s) 620
BsuRI GGCC 3 cut(s) 113, 1752, 2213
BtgI CCRYGG 1 cut(s) 1359
BtsCI GGATG 6 cut(s) 454, 805, 1474, 1735, 2131, 2260
BtsIMutI CAGTG 3 cut(s) 298, 677, 1013
BveI ACCTGC 1 cut(s) 1310
Cac8I GCNNGC 5 cut(s) 298, 1596, 1610, 1750, 1886
CaiI CAGNNNCTG 1 cut(s) 1283
CciI TCATGA 1 cut(s) 532
CfoI GCGC 2 cut(s) 107, 1890
Cfr13I GGNCC 4 cut(s) 823, 2100, 2195, 2246
Cfr42I CCGCGG 1 cut(s) 1362
CseI GACGC 2 cut(s) 716, 1614
Csp6I GTAC 8 cut(s) 354, 885, 975, 1113, 1568, 1711, 1868, 2016
CviAII CATG 9 cut(s) 268, 533, 587, 714, 1547, 1571, 1717, 1915, 2118
CviQI GTAC 8 cut(s) 354, 885, 975, 1113, 1568, 1711, 1868, 2016
DdeI CTNAG 6 cut(s) 276, 879, 935, 957, 1632, 2280
DpnI GATC 8 cut(s) 91, 712, 750, 1123, 1231, 2071, 2187, 2207
DpnII GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
DraI TTTAAA 2 cut(s) 1336, 1843
DraIII CACNNNGTG 2 cut(s) 44, 874
DrdI GACNNNNNNGTC 1 cut(s) 2265
DseDI GACNNNNNNGTC 1 cut(s) 2265
EaeI YGGCCR 1 cut(s) 1750
Eam1104I CTCTTC 5 cut(s) 416, 488, 1032, 1528, 1779
EarI CTCTTC 5 cut(s) 416, 488, 1032, 1528, 1779
EciI GGCGGA 2 cut(s) 886, 1826
Eco130I CCWWGG 1 cut(s) 621
Eco147I AGGCCT 1 cut(s) 2213
Eco31I GGTCTC 1 cut(s) 375
Eco32I GATATC 1 cut(s) 2273
Eco47I GGWCC 4 cut(s) 823, 2100, 2195, 2246
Eco47III AGCGCT 1 cut(s) 1889
Eco57I CTGAAG 1 cut(s) 2178
Eco88I CYCGRG 2 cut(s) 1879, 2189
EcoO109I RGGNCCY 2 cut(s) 2100, 2195
EcoRV GATATC 1 cut(s) 2273
EcoT14I CCWWGG 1 cut(s) 621
ErhI CCWWGG 1 cut(s) 621
FaeI CATG 9 cut(s) 271, 536, 590, 717, 1550, 1574, 1720, 1918, 2121
FalI AAGNNNNNCTT 2 cut(s) 775, 807
FaqI GGGAC 1 cut(s) 2086
FatI CATG 9 cut(s) 267, 532, 586, 713, 1546, 1570, 1716, 1914, 2117
FauNDI CATATG 2 cut(s) 234, 2149
FblI GTMKAC 2 cut(s) 1603, 2230
FokI GGATG 6 cut(s) 461, 812, 1481, 1722, 2138, 2247
FspBI CTAG 5 cut(s) 189, 582, 1143, 1530, 1578
GlaI GCGC 2 cut(s) 106, 1889
GsaI CCCAGC 1 cut(s) 1190
HaeII RGCGCY 1 cut(s) 1891
HaeIII GGCC 3 cut(s) 113, 1752, 2213
HapII CCGG 4 cut(s) 42, 828, 2123, 2244
HgaI GACGC 2 cut(s) 716, 1614
HhaI GCGC 2 cut(s) 107, 1890
Hin1II CATG 9 cut(s) 271, 536, 590, 717, 1550, 1574, 1720, 1918, 2121
Hin6I GCGC 2 cut(s) 105, 1888
HinP1I GCGC 2 cut(s) 105, 1888
HincII GTYRAC 2 cut(s) 1604, 2231
HindII GTYRAC 2 cut(s) 1604, 2231
HindIII AAGCTT 4 cut(s) 429, 1449, 1857, 2238
HinfI GANTC 5 cut(s) 200, 272, 689, 1265, 1641
HpaII CCGG 4 cut(s) 42, 828, 2123, 2244
HphI GGTGA 2 cut(s) 56, 332
Hpy166II GTNNAC 5 cut(s) 885, 1058, 1298, 1604, 2231
Hpy8I GTNNAC 5 cut(s) 885, 1058, 1298, 1604, 2231
Hpy99I CGWCG 2 cut(s) 1605, 1608
HpyAV CCTTC 9 cut(s) 21, 236, 771, 1185, 1792, 1933, 2010, 2055, 2153
HpyCH4III ACNGT 9 cut(s) 371, 386, 596, 669, 1017, 1112, 1302, 1433, 1794
HpyCH4IV ACGT 3 cut(s) 484, 697, 1963
HpyF10VI GCNNNNNNNGC 6 cut(s) 733, 809, 929, 938, 1337, 1448
HpyF3I CTNAG 6 cut(s) 276, 879, 935, 957, 1632, 2280
HpySE526I ACGT 3 cut(s) 484, 697, 1963
Hsp92II CATG 9 cut(s) 271, 536, 590, 717, 1550, 1574, 1720, 1918, 2121
HspAI GCGC 2 cut(s) 105, 1888
Kpn2I TCCGGA 2 cut(s) 2122, 2243
KspI CCGCGG 1 cut(s) 1362
Kzo9I GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
LguI GCTCTTC 2 cut(s) 1528, 1779
LmnI GCTCC 2 cut(s) 1219, 1363
Lsp1109I GCAGC 9 cut(s) 704, 767, 770, 916, 1292, 1423, 1451, 1733, 1937
LweI GCATC 6 cut(s) 238, 410, 790, 916, 1459, 1816
MaeI CTAG 5 cut(s) 189, 582, 1143, 1530, 1578
MaeII ACGT 3 cut(s) 484, 697, 1963
MaeIII GTNAC 8 cut(s) 328, 386, 559, 568, 590, 990, 1285, 1991
MalI GATC 8 cut(s) 91, 712, 750, 1123, 1231, 2071, 2187, 2207
MboI GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
MflI RGATCY 3 cut(s) 1121, 1229, 2069
MlsI TGGCCA 1 cut(s) 1752
MluNI TGGCCA 1 cut(s) 1752
MmeI TCCRAC 1 cut(s) 2120
Mox20I TGGCCA 1 cut(s) 1752
MroI TCCGGA 2 cut(s) 2122, 2243
MroXI GAANNNNTTC 1 cut(s) 952
MscI TGGCCA 1 cut(s) 1752
MseI TTAA 9 cut(s) 216, 656, 1025, 1083, 1304, 1335, 1620, 1674, 1842
MslI CAYNNNNRTG 1 cut(s) 534
Msp20I TGGCCA 1 cut(s) 1752
MspA1I CMGCKG 4 cut(s) 335, 1186, 1283, 1361
MspI CCGG 4 cut(s) 42, 828, 2123, 2244
MspR9I CCNGG 2 cut(s) 42, 828
MvnI CGCG 2 cut(s) 1361, 1560
MwoI GCNNNNNNNGC 6 cut(s) 733, 809, 929, 938, 1337, 1448
NciI CCSGG 2 cut(s) 42, 828
NdeI CATATG 2 cut(s) 234, 2149
NdeII GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
NlaIII CATG 9 cut(s) 271, 536, 590, 717, 1550, 1574, 1720, 1918, 2121
NlaIV GGNNCC 3 cut(s) 825, 2102, 2196
NmeAIII GCCGAG 1 cut(s) 1787
NmuCI GTSAC 4 cut(s) 386, 559, 568, 1285
NspI RCATGY 2 cut(s) 1574, 2121
PagI TCATGA 1 cut(s) 532
PceI AGGCCT 1 cut(s) 2213
PciI ACATGT 1 cut(s) 2117
PciSI GCTCTTC 2 cut(s) 1528, 1779
PdmI GAANNNNTTC 1 cut(s) 952
PfeI GAWTC 5 cut(s) 200, 272, 689, 1265, 1641
PflMI CCANNNNNTGG 1 cut(s) 1759
Ple19I CGATCG 1 cut(s) 751
Ppu21I YACGTR 1 cut(s) 698
PpuMI RGGWCCY 2 cut(s) 2100, 2195
PscI ACATGT 1 cut(s) 2117
PshBI ATTAAT 1 cut(s) 1083
Psp1406I AACGTT 1 cut(s) 1963
Psp5II RGGWCCY 2 cut(s) 2100, 2195
PspFI CCCAGC 1 cut(s) 1186
PspN4I GGNNCC 3 cut(s) 825, 2102, 2196
PspPI GGNCC 4 cut(s) 823, 2100, 2195, 2246
PspPPI RGGWCCY 2 cut(s) 2100, 2195
PsrI GAACNNNNNNTAC 2 cut(s) 877, 909
PstI CTGCAG 1 cut(s) 1441
PstNI CAGNNNCTG 1 cut(s) 1283
PsuI RGATCY 3 cut(s) 1121, 1229, 2069
PvuI CGATCG 1 cut(s) 751
PvuII CAGCTG 2 cut(s) 1186, 1283
RsaI GTAC 8 cut(s) 355, 886, 976, 1114, 1569, 1712, 1869, 2017
RsaNI GTAC 8 cut(s) 354, 885, 975, 1113, 1568, 1711, 1868, 2016
RseI CAYNNNNRTG 1 cut(s) 534
SacII CCGCGG 1 cut(s) 1362
SalI GTCGAC 2 cut(s) 1602, 2229
SapI GCTCTTC 2 cut(s) 1528, 1779
SaqAI TTAA 9 cut(s) 216, 656, 1025, 1083, 1304, 1335, 1620, 1674, 1842
Sau3AI GATC 8 cut(s) 89, 710, 748, 1121, 1229, 2069, 2185, 2205
Sau96I GGNCC 4 cut(s) 823, 2100, 2195, 2246
ScaI AGTACT 3 cut(s) 355, 1869, 2017
ScrFI CCNGG 2 cut(s) 42, 828
SfaNI GCATC 6 cut(s) 238, 410, 790, 916, 1459, 1816
SfcI CTRYAG 2 cut(s) 742, 1437
Sfr303I CCGCGG 1 cut(s) 1362
SgrBI CCGCGG 1 cut(s) 1362
SgrDI CGTCGACG 1 cut(s) 1602
SinI GGWCC 4 cut(s) 823, 2100, 2195, 2246
SmiMI CAYNNNNRTG 1 cut(s) 534
SmlI CTYRAG 2 cut(s) 722, 2199
SmoI CTYRAG 2 cut(s) 722, 2199
SseBI AGGCCT 1 cut(s) 2213
SspMI CTAG 5 cut(s) 189, 582, 1143, 1530, 1578
StuI AGGCCT 1 cut(s) 2213
StyD4I CCNGG 2 cut(s) 40, 826
StyI CCWWGG 1 cut(s) 621
TaaI ACNGT 9 cut(s) 371, 386, 596, 669, 1017, 1112, 1302, 1433, 1794
TaiI ACGT 3 cut(s) 487, 700, 1966
TaqI TCGA 7 cut(s) 80, 436, 478, 1603, 2208, 2230, 2269
TatI WGTACW 6 cut(s) 353, 884, 974, 1567, 1867, 2015
TauI GCSGC 2 cut(s) 1361, 1415
TfiI GAWTC 5 cut(s) 200, 272, 689, 1265, 1641
Tru1I TTAA 9 cut(s) 216, 656, 1025, 1083, 1304, 1335, 1620, 1674, 1842
Tru9I TTAA 9 cut(s) 216, 656, 1025, 1083, 1304, 1335, 1620, 1674, 1842
TscAI CASTG 3 cut(s) 298, 684, 1020
TseFI GTSAC 4 cut(s) 386, 559, 568, 1285
TseI GCWGC 9 cut(s) 717, 755, 758, 929, 1280, 1436, 1439, 1721, 1925
Tsp45I GTSAC 4 cut(s) 386, 559, 568, 1285
TspGWI ACGGA 1 cut(s) 4
TspRI CASTG 3 cut(s) 298, 684, 1020
Van91I CCANNNNNTGG 1 cut(s) 1759
VpaK11BI GGWCC 4 cut(s) 823, 2100, 2195, 2246
VspI ATTAAT 1 cut(s) 1083
XapI RAATTY 3 cut(s) 211, 1651, 1690
XbaI TCTAGA 1 cut(s) 1529
XceI RCATGY 2 cut(s) 1574, 2121
XmiI GTMKAC 2 cut(s) 1603, 2230
XmnI GAANNNNTTC 1 cut(s) 952
XspI CTAG 5 cut(s) 189, 582, 1143, 1530, 1578
ZrmI AGTACT 3 cut(s) 355, 1869, 2017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.