dnaJ homolog subfamily C member
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41520 AT2G41520 AT2G41520 |
| fragaria_vesca | FvH4_2g04200 FvH4_6g24600 FvH4_6g24600 |
| malus_domestica | MD12G1083200.v1.1 MD14G1078300.v1.1 |
| prunus_persica | Prupe.7G052600_v2.0.a1 Prupe.7G052600_v2.0.a1 Prupe.7G052600_v2.0.a1 Prupe.7G052600_v2.0.a1 |
| pyrus_communis | pycom12g07010 |
| rosa_chinensis | RchiOBHm_Chr3g0483931 RchiOBHm_Chr6g0253551 |
| rosa_laevigata | RLG00000015000 RLG00000023251 |
| rosa_multiflora | Rmu_sc0002252.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00398000 Rroxscaffold_7G00211760 |
| rosa_rugosa | Rorug03G0209000 Rorug05G0545000 Rorug05G0545000 |
| rosa_samantha | Rh3AG257600 Rh3BG294400 Rh3CG292200 Rh3DG287400 Rh6AG060100 Rh6AG060200 Rh6AG060300 Rh6BG054200 Rh6CG053900 Rh6CG054000 Rh6DG051400 Rh6DG051500 |
| rosa_wichuraiana | Rw3G023280 Rw6G005380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2153 |
| Acc65I | GGTACC | 1 cut(s) | 1136 |
| AccB1I | GGYRCC | 1 cut(s) | 1136 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3292 |
| AccBSI | CCGCTC | 1 cut(s) | 376 |
| AccI | GTMKAC | 3 cut(s) | 2708, 3363, 3377 |
| AccII | CGCG | 2 cut(s) | 175, 2107 |
| AccIII | TCCGGA | 1 cut(s) | 2627 |
| AclWI | GGATC | 6 cut(s) | 440, 1507, 1655, 2655, 3076, 3244 |
| AcoI | YGGCCR | 6 cut(s) | 5, 170, 176, 1550, 2514, 3242 |
| AcsI | RAATTY | 7 cut(s) | 544, 721, 836, 1778, 1825, 1972, 2563 |
| AcuI | CTGAAG | 2 cut(s) | 1329, 2385 |
| AcyI | GRCGYC | 3 cut(s) | 21, 89, 2098 |
| AdeI | CACNNNGTG | 1 cut(s) | 1730 |
| AfaI | GTAC | 4 cut(s) | 1096, 1138, 2397, 2606 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 329, 1146, 1613, 3292 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 136 |
| AhlI | ACTAGT | 2 cut(s) | 296, 1061 |
| AjnI | CCWGG | 1 cut(s) | 1606 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1141, 1173 |
| Alw21I | GWGCWC | 1 cut(s) | 863 |
| Alw26I | GTCTC | 5 cut(s) | 80, 236, 1283, 1606, 2294 |
| AlwI | GGATC | 6 cut(s) | 440, 1507, 1655, 2655, 3076, 3244 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1250, 1319, 1658 |
| Aor13HI | TCCGGA | 1 cut(s) | 2627 |
| ApoI | RAATTY | 7 cut(s) | 544, 721, 836, 1778, 1825, 1972, 2563 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 140, 172, 206, 238, 791, 823 |
| AseI | ATTAAT | 1 cut(s) | 1230 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2389 |
| Asp718I | GGTACC | 1 cut(s) | 1136 |
| AspLEI | GCGC | 3 cut(s) | 353, 1558, 2109 |
| AspS9I | GGNCC | 7 cut(s) | 27, 134, 233, 251, 455, 1253, 1757 |
| AsuII | TTCGAA | 1 cut(s) | 834 |
| AvaII | GGWCC | 3 cut(s) | 27, 134, 1757 |
| AxyI | CCTNAGG | 1 cut(s) | 2426 |
| BalI | TGGCCA | 2 cut(s) | 1552, 2516 |
| BanI | GGYRCC | 1 cut(s) | 1136 |
| BanII | GRGCYC | 3 cut(s) | 382, 863, 2250 |
| BbsI | GAAGAC | 3 cut(s) | 1953, 2093, 2373 |
| Bbv12I | GWGCWC | 1 cut(s) | 863 |
| BccI | CCATC | 6 cut(s) | 392, 1364, 2506, 2577, 2669, 3338 |
| BceAI | ACGGC | 3 cut(s) | 261, 1146, 3373 |
| BciT130I | CCWGG | 1 cut(s) | 1608 |
| BciVI | GTATCC | 2 cut(s) | 1295, 2935 |
| BclI | TGATCA | 3 cut(s) | 493, 523, 1795 |
| BcoDI | GTCTC | 5 cut(s) | 80, 236, 1283, 1606, 2294 |
| BcuI | ACTAGT | 2 cut(s) | 296, 1061 |
| BfmI | CTRYAG | 6 cut(s) | 1650, 2070, 2446, 2745, 3276, 3322 |
| BfoI | RGCGCY | 1 cut(s) | 354 |
| BfuI | GTATCC | 2 cut(s) | 1295, 2935 |
| BlpI | GCTNAGC | 1 cut(s) | 435 |
| BmcAI | AGTACT | 1 cut(s) | 1096 |
| Bme1390I | CCNGG | 1 cut(s) | 1608 |
| Bme18I | GGWCC | 3 cut(s) | 27, 134, 1757 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 7 cut(s) | 27, 134, 233, 251, 455, 1253, 1757 |
| BmiI | GGNNCC | 7 cut(s) | 29, 127, 456, 691, 919, 1138, 1735 |
| BmrFI | CCNGG | 1 cut(s) | 1608 |
| BmrI | ACTGGG | 2 cut(s) | 240, 1592 |
| BmsI | GCATC | 7 cut(s) | 199, 1192, 2069, 2218, 2740, 3145, 3298 |
| BmuI | ACTGGG | 2 cut(s) | 240, 1592 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3324 |
| BpiI | GAAGAC | 3 cut(s) | 1953, 2093, 2373 |
| BpmI | CTGGAG | 2 cut(s) | 1350, 1908 |
| Bpu10I | CCTNAGC | 1 cut(s) | 381 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 435 |
| Bpu14I | TTCGAA | 1 cut(s) | 834 |
| BpuEI | CTTGAG | 1 cut(s) | 3068 |
| BsaAI | YACGTR | 1 cut(s) | 3134 |
| BsaBI | GATNNNNATC | 1 cut(s) | 528 |
| BsaHI | GRCGYC | 3 cut(s) | 21, 89, 2098 |
| BsaI | GGTCTC | 1 cut(s) | 1283 |
| BsaJI | CCNNGG | 6 cut(s) | 173, 179, 936, 1572, 1623, 2766 |
| BsaWI | WCCGGW | 3 cut(s) | 24, 692, 2627 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 469, 499, 1348, 1378 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 329, 1146, 1613, 3292 |
| Bse118I | RCCGGY | 2 cut(s) | 7, 235 |
| Bse1I | ACTGG | 7 cut(s) | 235, 921, 1143, 1210, 1598, 2638, 3373 |
| Bse21I | CCTNAGG | 1 cut(s) | 2426 |
| Bse3DI | GCAATG | 3 cut(s) | 1406, 1553, 3312 |
| Bse8I | GATNNNNATC | 1 cut(s) | 528 |
| BseAI | TCCGGA | 1 cut(s) | 2627 |
| BseBI | CCWGG | 1 cut(s) | 1608 |
| BseDI | CCNNGG | 6 cut(s) | 173, 179, 936, 1572, 1623, 2766 |
| BseGI | GGATG | 8 cut(s) | 214, 403, 448, 1616, 2475, 2957, 2962, 3160 |
| BseJI | GATNNNNATC | 1 cut(s) | 528 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 329, 1146, 1613, 3292 |
| BseMI | GCAATG | 3 cut(s) | 1406, 1553, 3312 |
| BseNI | ACTGG | 7 cut(s) | 235, 921, 1143, 1210, 1598, 2638, 3373 |
| BseRI | GAGGAG | 4 cut(s) | 98, 490, 863, 2866 |
| BseX3I | CGGCCG | 2 cut(s) | 170, 176 |
| BseYI | CCCAGC | 1 cut(s) | 248 |
| BsgI | GTGCAG | 3 cut(s) | 1707, 2478, 2505 |
| Bsh1236I | CGCG | 2 cut(s) | 175, 2107 |
| Bsh1285I | CGRYCG | 2 cut(s) | 173, 179 |
| BshNI | GGYRCC | 1 cut(s) | 1136 |
| BsiEI | CGRYCG | 2 cut(s) | 173, 179 |
| BsiHKAI | GWGCWC | 1 cut(s) | 863 |
| BsiSI | CCGG | 7 cut(s) | 8, 25, 51, 236, 254, 693, 2628 |
| BslFI | GGGAC | 3 cut(s) | 13, 1505, 2516 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 329, 1146, 1613, 3292 |
| BsmAI | GTCTC | 5 cut(s) | 80, 236, 1283, 1606, 2294 |
| BsmBI | CGTCTC | 2 cut(s) | 80, 236 |
| BsmFI | GGGAC | 3 cut(s) | 13, 1505, 2516 |
| BsmI | GAATGC | 1 cut(s) | 220 |
| Bso31I | GGTCTC | 1 cut(s) | 1283 |
| Bsp119I | TTCGAA | 1 cut(s) | 834 |
| Bsp1286I | GDGCHC | 3 cut(s) | 382, 863, 2250 |
| Bsp13I | TCCGGA | 1 cut(s) | 2627 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 435 |
| Bsp19I | CCATGG | 1 cut(s) | 1623 |
| BspEI | TCCGGA | 1 cut(s) | 2627 |
| BspFNI | CGCG | 2 cut(s) | 175, 2107 |
| BspHI | TCATGA | 2 cut(s) | 874, 2296 |
| BspLI | GGNNCC | 7 cut(s) | 29, 127, 456, 691, 919, 1138, 1735 |
| BspMAI | CTGCAG | 3 cut(s) | 2074, 3280, 3326 |
| BspPI | GGATC | 6 cut(s) | 440, 1507, 1655, 2655, 3076, 3244 |
| BspT104I | TTCGAA | 1 cut(s) | 834 |
| BspT107I | GGYRCC | 1 cut(s) | 1136 |
| BspTNI | GGTCTC | 1 cut(s) | 1283 |
| BsrBI | CCGCTC | 1 cut(s) | 376 |
| BsrDI | GCAATG | 3 cut(s) | 1406, 1553, 3312 |
| BsrFI | RCCGGY | 2 cut(s) | 7, 235 |
| BsrI | ACTGG | 7 cut(s) | 235, 921, 1143, 1210, 1598, 2638, 3373 |
| BssAI | RCCGGY | 2 cut(s) | 7, 235 |
| BssECI | CCNNGG | 6 cut(s) | 173, 179, 936, 1572, 1623, 2766 |
| BssNAI | GTATAC | 3 cut(s) | 2709, 3364, 3378 |
| BssNI | GRCGYC | 3 cut(s) | 21, 89, 2098 |
| BssT1I | CCWWGG | 4 cut(s) | 936, 1572, 1623, 2766 |
| Bst1107I | GTATAC | 3 cut(s) | 2709, 3364, 3378 |
| Bst2UI | CCWGG | 1 cut(s) | 1608 |
| Bst6I | CTCTTC | 1 cut(s) | 2856 |
| BstACI | GRCGYC | 3 cut(s) | 21, 89, 2098 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1319 |
| BstBAI | YACGTR | 1 cut(s) | 3134 |
| BstBI | TTCGAA | 1 cut(s) | 834 |
| BstC8I | GCNNGC | 8 cut(s) | 9, 19, 237, 378, 1207, 1252, 1423, 1554 |
| BstDSI | CCRYGG | 2 cut(s) | 173, 1623 |
| BstF5I | GGATG | 8 cut(s) | 214, 403, 448, 1616, 2475, 2957, 2962, 3160 |
| BstFNI | CGCG | 2 cut(s) | 175, 2107 |
| BstH2I | RGCGCY | 1 cut(s) | 354 |
| BstHHI | GCGC | 3 cut(s) | 353, 1558, 2109 |
| BstMAI | GTCTC | 5 cut(s) | 80, 236, 1283, 1606, 2294 |
| BstMCI | CGRYCG | 2 cut(s) | 173, 179 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 245, 1319, 1359, 2104, 2762, 3287 |
| BstNI | CCWGG | 1 cut(s) | 1608 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3324 |
| BstSCI | CCNGG | 1 cut(s) | 1606 |
| BstSFI | CTRYAG | 6 cut(s) | 1650, 2070, 2446, 2745, 3276, 3322 |
| BstUI | CGCG | 2 cut(s) | 175, 2107 |
| BstV2I | GAAGAC | 3 cut(s) | 1953, 2093, 2373 |
| BstX2I | RGATCY | 2 cut(s) | 3068, 3236 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1295, 2731 |
| BstYI | RGATCY | 2 cut(s) | 3068, 3236 |
| BstZ17I | GTATAC | 3 cut(s) | 2709, 3364, 3378 |
| BstZI | CGGCCG | 2 cut(s) | 170, 176 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2426 |
| BsuI | GTATCC | 2 cut(s) | 1295, 2935 |
| BtgI | CCRYGG | 2 cut(s) | 173, 1623 |
| BtsCI | GGATG | 8 cut(s) | 214, 403, 448, 1616, 2475, 2957, 2962, 3160 |
| BtsI | GCAGTG | 2 cut(s) | 2517, 3204 |
| BtsIMutI | CAGTG | 9 cut(s) | 397, 489, 1150, 1161, 1815, 2517, 2767, 2932, 3204 |
| Cac8I | GCNNGC | 8 cut(s) | 9, 19, 237, 378, 1207, 1252, 1423, 1554 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1250, 1319, 1658 |
| CciI | TCATGA | 2 cut(s) | 874, 2296 |
| CfoI | GCGC | 3 cut(s) | 353, 1558, 2109 |
| Cfr10I | RCCGGY | 2 cut(s) | 7, 235 |
| Cfr13I | GGNCC | 7 cut(s) | 27, 134, 233, 251, 455, 1253, 1757 |
| Cfr42I | CCGCGG | 1 cut(s) | 176 |
| CpoI | CGGWCCG | 1 cut(s) | 134 |
| CseI | GACGC | 3 cut(s) | 10, 97, 2087 |
| Csp6I | GTAC | 4 cut(s) | 1095, 1137, 2396, 2605 |
| CspI | CGGWCCG | 1 cut(s) | 134 |
| CviAII | CATG | 9 cut(s) | 875, 1103, 1257, 1624, 1838, 1928, 2252, 2297, 2509 |
| CviQI | GTAC | 4 cut(s) | 1095, 1137, 2396, 2605 |
| DraIII | CACNNNGTG | 1 cut(s) | 1730 |
| DriI | GACNNNNNGTC | 1 cut(s) | 136 |
| EaeI | YGGCCR | 6 cut(s) | 5, 170, 176, 1550, 2514, 3242 |
| EagI | CGGCCG | 2 cut(s) | 170, 176 |
| Eam1104I | CTCTTC | 1 cut(s) | 2856 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 136 |
| EarI | CTCTTC | 1 cut(s) | 2856 |
| Ecl136II | GAGCTC | 1 cut(s) | 861 |
| EclXI | CGGCCG | 2 cut(s) | 170, 176 |
| Eco130I | CCWWGG | 4 cut(s) | 936, 1572, 1623, 2766 |
| Eco147I | AGGCCT | 2 cut(s) | 2431, 2786 |
| Eco24I | GRGCYC | 3 cut(s) | 382, 863, 2250 |
| Eco31I | GGTCTC | 1 cut(s) | 1283 |
| Eco47I | GGWCC | 3 cut(s) | 27, 134, 1757 |
| Eco52I | CGGCCG | 2 cut(s) | 170, 176 |
| Eco53kI | GAGCTC | 1 cut(s) | 861 |
| Eco57I | CTGAAG | 2 cut(s) | 1329, 2385 |
| Eco81I | CCTNAGG | 1 cut(s) | 2426 |
| EcoICRI | GAGCTC | 1 cut(s) | 861 |
| EcoRI | GAATTC | 2 cut(s) | 721, 1825 |
| EcoRII | CCWGG | 1 cut(s) | 1606 |
| EcoT14I | CCWWGG | 4 cut(s) | 936, 1572, 1623, 2766 |
| EcoT38I | GRGCYC | 3 cut(s) | 382, 863, 2250 |
| ErhI | CCWWGG | 4 cut(s) | 936, 1572, 1623, 2766 |
| Esp3I | CGTCTC | 2 cut(s) | 80, 236 |
| FaeI | CATG | 9 cut(s) | 878, 1106, 1260, 1627, 1841, 1931, 2255, 2300, 2512 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2479, 2511 |
| FaqI | GGGAC | 3 cut(s) | 13, 1505, 2516 |
| FatI | CATG | 9 cut(s) | 874, 1102, 1256, 1623, 1837, 1927, 2251, 2296, 2508 |
| FauI | CCCGC | 4 cut(s) | 10, 211, 369, 1315 |
| FauNDI | CATATG | 2 cut(s) | 1639, 2968 |
| FbaI | TGATCA | 3 cut(s) | 493, 523, 1795 |
| FblI | GTMKAC | 3 cut(s) | 2708, 3363, 3377 |
| FokI | GGATG | 8 cut(s) | 221, 410, 455, 1623, 2482, 2949, 2964, 3167 |
| FriOI | GRGCYC | 3 cut(s) | 382, 863, 2250 |
| GlaI | GCGC | 3 cut(s) | 352, 1557, 2108 |
| GsaI | CCCAGC | 1 cut(s) | 252 |
| GsuI | CTGGAG | 2 cut(s) | 1350, 1908 |
| HaeII | RGCGCY | 1 cut(s) | 354 |
| HapII | CCGG | 7 cut(s) | 8, 25, 51, 236, 254, 693, 2628 |
| HgaI | GACGC | 3 cut(s) | 10, 97, 2087 |
| HhaI | GCGC | 3 cut(s) | 353, 1558, 2109 |
| Hin1I | GRCGYC | 3 cut(s) | 21, 89, 2098 |
| Hin1II | CATG | 9 cut(s) | 878, 1106, 1260, 1627, 1841, 1931, 2255, 2300, 2512 |
| Hin6I | GCGC | 3 cut(s) | 351, 1556, 2107 |
| HinP1I | GCGC | 3 cut(s) | 351, 1556, 2107 |
| HincII | GTYRAC | 2 cut(s) | 262, 1858 |
| HindII | GTYRAC | 2 cut(s) | 262, 1858 |
| HindIII | AAGCTT | 4 cut(s) | 2334, 2493, 2726, 3288 |
| HpaII | CCGG | 7 cut(s) | 8, 25, 51, 236, 254, 693, 2628 |
| Hpy166II | GTNNAC | 9 cut(s) | 262, 388, 1170, 1858, 2709, 2882, 3137, 3364, 3378 |
| Hpy8I | GTNNAC | 9 cut(s) | 262, 388, 1170, 1858, 2709, 2882, 3137, 3364, 3378 |
| Hpy99I | CGWCG | 2 cut(s) | 134, 142 |
| HpyCH4IV | ACGT | 3 cut(s) | 1950, 2144, 3133 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 245, 1319, 1359, 2104, 2762, 3287 |
| HpySE526I | ACGT | 3 cut(s) | 1950, 2144, 3133 |
| Hsp92I | GRCGYC | 3 cut(s) | 21, 89, 2098 |
| Hsp92II | CATG | 9 cut(s) | 878, 1106, 1260, 1627, 1841, 1931, 2255, 2300, 2512 |
| HspAI | GCGC | 3 cut(s) | 351, 1556, 2107 |
| Kpn2I | TCCGGA | 1 cut(s) | 2627 |
| KpnI | GGTACC | 1 cut(s) | 1140 |
| KroI | GCCGGC | 2 cut(s) | 7, 235 |
| KroNI | GCCGGC | 2 cut(s) | 9, 237 |
| Ksp22I | TGATCA | 3 cut(s) | 493, 523, 1795 |
| KspI | CCGCGG | 1 cut(s) | 176 |
| LmnI | GCTCC | 7 cut(s) | 544, 850, 858, 1739, 1889, 1916, 3202 |
| LweI | GCATC | 7 cut(s) | 199, 1192, 2069, 2218, 2740, 3145, 3298 |
| MaeII | ACGT | 3 cut(s) | 1950, 2144, 3133 |
| MaeIII | GTNAC | 8 cut(s) | 156, 485, 797, 1069, 1124, 2260, 2814, 3124 |
| MbiI | CCGCTC | 1 cut(s) | 376 |
| MfeI | CAATTG | 2 cut(s) | 1272, 1861 |
| MflI | RGATCY | 2 cut(s) | 3068, 3236 |
| MhlI | GDGCHC | 3 cut(s) | 382, 863, 2250 |
| MlsI | TGGCCA | 2 cut(s) | 1552, 2516 |
| MluNI | TGGCCA | 2 cut(s) | 1552, 2516 |
| MlyI | GAGTC | 2 cut(s) | 656, 731 |
| MmeI | TCCRAC | 4 cut(s) | 153, 836, 986, 1312 |
| Mox20I | TGGCCA | 2 cut(s) | 1552, 2516 |
| MroI | TCCGGA | 1 cut(s) | 2627 |
| MroNI | GCCGGC | 2 cut(s) | 7, 235 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2389 |
| MscI | TGGCCA | 2 cut(s) | 1552, 2516 |
| MseI | TTAA | 6 cut(s) | 306, 825, 1230, 2610, 3143, 3357 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1469, 1609, 2967, 3153 |
| Msp20I | TGGCCA | 2 cut(s) | 1552, 2516 |
| MspA1I | CMGCKG | 3 cut(s) | 175, 906, 1247 |
| MspI | CCGG | 7 cut(s) | 8, 25, 51, 236, 254, 693, 2628 |
| MspR9I | CCNGG | 1 cut(s) | 1608 |
| MunI | CAATTG | 2 cut(s) | 1272, 1861 |
| Mva1269I | GAATGC | 1 cut(s) | 220 |
| MvaI | CCWGG | 1 cut(s) | 1608 |
| MvnI | CGCG | 2 cut(s) | 175, 2107 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 245, 1319, 1359, 2104, 2762, 3287 |
| NaeI | GCCGGC | 2 cut(s) | 9, 237 |
| NcoI | CCATGG | 1 cut(s) | 1623 |
| NdeI | CATATG | 2 cut(s) | 1639, 2968 |
| NgoMIV | GCCGGC | 2 cut(s) | 7, 235 |
| NlaIII | CATG | 9 cut(s) | 878, 1106, 1260, 1627, 1841, 1931, 2255, 2300, 2512 |
| NlaIV | GGNNCC | 7 cut(s) | 29, 127, 456, 691, 919, 1138, 1735 |
| NmeAIII | GCCGAG | 5 cut(s) | 148, 204, 483, 2559, 3220 |
| NmuCI | GTSAC | 4 cut(s) | 156, 485, 797, 3124 |
| NspV | TTCGAA | 1 cut(s) | 834 |
| PagI | TCATGA | 2 cut(s) | 874, 2296 |
| PceI | AGGCCT | 2 cut(s) | 2431, 2786 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 513 |
| PctI | GAATGC | 1 cut(s) | 220 |
| PdiI | GCCGGC | 2 cut(s) | 9, 237 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2389 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3292 |
| PleI | GAGTC | 2 cut(s) | 656, 731 |
| PpsI | GAGTC | 2 cut(s) | 656, 731 |
| Ppu21I | YACGTR | 1 cut(s) | 3134 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3324 |
| PshBI | ATTAAT | 1 cut(s) | 1230 |
| PsiI | TTATAA | 1 cut(s) | 2153 |
| Psp124BI | GAGCTC | 1 cut(s) | 863 |
| Psp6I | CCWGG | 1 cut(s) | 1606 |
| PspFI | CCCAGC | 1 cut(s) | 248 |
| PspGI | CCWGG | 1 cut(s) | 1606 |
| PspN4I | GGNNCC | 7 cut(s) | 29, 127, 456, 691, 919, 1138, 1735 |
| PspPI | GGNCC | 7 cut(s) | 27, 134, 233, 251, 455, 1253, 1757 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 901, 933 |
| PstI | CTGCAG | 3 cut(s) | 2074, 3280, 3326 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1250, 1319, 1658 |
| PsuI | RGATCY | 2 cut(s) | 3068, 3236 |
| PvuII | CAGCTG | 1 cut(s) | 1247 |
| RsaI | GTAC | 4 cut(s) | 1096, 1138, 2397, 2606 |
| RsaNI | GTAC | 4 cut(s) | 1095, 1137, 2396, 2605 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1469, 1609, 2967, 3153 |
| Rsr2I | CGGWCCG | 1 cut(s) | 134 |
| RsrII | CGGWCCG | 1 cut(s) | 134 |
| SacI | GAGCTC | 1 cut(s) | 863 |
| SacII | CCGCGG | 1 cut(s) | 176 |
| SaqAI | TTAA | 6 cut(s) | 306, 825, 1230, 2610, 3143, 3357 |
| Sau96I | GGNCC | 7 cut(s) | 27, 134, 233, 251, 455, 1253, 1757 |
| ScaI | AGTACT | 1 cut(s) | 1096 |
| SchI | GAGTC | 2 cut(s) | 656, 731 |
| ScrFI | CCNGG | 1 cut(s) | 1608 |
| SduI | GDGCHC | 3 cut(s) | 382, 863, 2250 |
| SfaNI | GCATC | 7 cut(s) | 199, 1192, 2069, 2218, 2740, 3145, 3298 |
| SfcI | CTRYAG | 6 cut(s) | 1650, 2070, 2446, 2745, 3276, 3322 |
| Sfr303I | CCGCGG | 1 cut(s) | 176 |
| SfuI | TTCGAA | 1 cut(s) | 834 |
| SgrBI | CCGCGG | 1 cut(s) | 176 |
| SinI | GGWCC | 3 cut(s) | 27, 134, 1757 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1469, 1609, 2967, 3153 |
| SmlI | CTYRAG | 1 cut(s) | 3047 |
| SmoI | CTYRAG | 1 cut(s) | 3047 |
| SpeI | ACTAGT | 2 cut(s) | 296, 1061 |
| SseBI | AGGCCT | 2 cut(s) | 2431, 2786 |
| SspI | AATATT | 3 cut(s) | 632, 1851, 3232 |
| SstI | GAGCTC | 1 cut(s) | 863 |
| StuI | AGGCCT | 2 cut(s) | 2431, 2786 |
| StyD4I | CCNGG | 1 cut(s) | 1606 |
| StyI | CCWWGG | 4 cut(s) | 936, 1572, 1623, 2766 |
| TaiI | ACGT | 3 cut(s) | 1953, 2147, 3136 |
| TaqI | TCGA | 4 cut(s) | 224, 516, 834, 1670 |
| TatI | WGTACW | 1 cut(s) | 1094 |
| TauI | GCSGC | 5 cut(s) | 14, 17, 175, 178, 1787 |
| Tru1I | TTAA | 6 cut(s) | 306, 825, 1230, 2610, 3143, 3357 |
| Tru9I | TTAA | 6 cut(s) | 306, 825, 1230, 2610, 3143, 3357 |
| TscAI | CASTG | 9 cut(s) | 397, 496, 1150, 1168, 1822, 2524, 2767, 2932, 3204 |
| TseFI | GTSAC | 4 cut(s) | 156, 485, 797, 3124 |
| Tsp45I | GTSAC | 4 cut(s) | 156, 485, 797, 3124 |
| TspGWI | ACGGA | 3 cut(s) | 126, 637, 944 |
| TspRI | CASTG | 9 cut(s) | 397, 496, 1150, 1168, 1822, 2524, 2767, 2932, 3204 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3292 |
| VpaK11BI | GGWCC | 3 cut(s) | 27, 134, 1757 |
| VspI | ATTAAT | 1 cut(s) | 1230 |
| XapI | RAATTY | 7 cut(s) | 544, 721, 836, 1778, 1825, 1972, 2563 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1109 |
| XmiI | GTMKAC | 3 cut(s) | 2708, 3363, 3377 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2389 |
| ZrmI | AGTACT | 1 cut(s) | 1096 |