Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006097

Physical Location & Seq

Genomic Coordinates Forward (+)

18922533 .. 18932055

Gene Structure 9523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G46020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6579 bp

ATGCAATCTGGAGGCAGTGGCGGAGGGCCCGCTCGGAATCCGGCCATGGGTCCGGCTGGTCGGACTGCTTCCACGTCATCCGCTGCTTCTCCTTCTTCTTCCTCTTCATCTGTGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAACAGCAACAGCAGCTGGCGTCTAGGCAGCAGCAGCAGCAGCACAGAAACTCAGATACAAACGAAAATATGTTTGCATATCAACCTGGTGGGGTTCAGGGAATGATGGGCGGTGGCAACTTTGCTTCGTCTCCGGGCTCTATGCAAATGCCTCAGCAGTCTAGAAATTTTTTTGAGTCTCCTCAGCAACAACAACAACAACAACAACAGGGTTCTTCTACCCAAGAGGGCCAGCAAAATTTTAATCCAATGCAGCAAGCGTATATTCAGTTTGCTATGCAGGCTCAGCATCAAAAAGCACAGCAGCAAGCTAGGATGGGAATGGTGGGTTCATCAAGTGTGGGAAAGGATCAAGATGCACGAATGGGAATGTTGAATATGCAAGACTTGAATCCGTCTAGTCAGCCCCAGGCCTCATCATCGAAGCCATCGGGCGATCAGTTTGCTCGCGGTGAAAGGCAGACTGAATCAAGTTCTCAGCAAAGGAACGAAACAAAATCTCATCCTCAGCAGCAGGTGGGTACCGGACAACTAATGCCTGGAAATATGATAAGGCCAATGCAAGCACCACAGGCTCAGCAGCTTGTCAATAACATGGGAAACAACCAACTCGCATTTGCACAACAGTGGCAGGCAATGCAGGCATGGGCGCGTGAGCGTAATATCGATCTCTCACATCCTGCCAACGCCAGCCAAATGGCACACATCCTTCAGGCAAGAATGGCTGCTCAACAGAAAGCTGGTGAAGGCAATGTGGCCTCACAGTCACCATCTATTCCAATCTCTAGCCAGCCGGCTTCATCTTCGGTTGTTCCAGGTGAGAATTCACCACATGCCAACTCTGCTAGTGATATCTCTGGGCAGTCAGGATCAGCGAAGGCCAGACATGCATTATCTACTGGCTCATTTGCCTCGACTTCCAGTCCCAGAATGGTCAATCCTGCTATGAATCCCTTCTCCGGCCAAGGGAGAGAGAATCCAATGTATCCTCGACATTTAGTTCAGCCTACAAATGGGATGCCCTCAGGAAATCCCCTGCAGACTTCTGCAAATGAGACTCCTGTTTTGGATCAGAATGCATCTACAAAAAAAAGTTTAGGTCCTGCTGAACATTTGCAAATGCAGCAGCCTAGGCAACTGAATACACCGACTCCAAATTTAGTAGCGCCATCTGATACTGGTCCACTCAGTAACTCGTCCCTTCAGAGTGGACAGGGGACCCAACAAGCACAGCAGCGATCAGGATTTACCAAACAGCAACTCCATGTTCTCAAAGCCCAGATACTGGCATTTAGGCGTTTGAAGAAAGGGGAAGGTTCTTTGCCTCCGGAGCTTCTTCAAGCTATTTCTCCACCACCGCTTGAACTACAGACGCAGAGGCAAATATCTCCTGCCATAGGGAAAGTTCAGGATAGATCTTCAGACAAAACTGGAGAAGACCAAGCAAGGTCGCTAGAGTGTGGCAAGGAGTCTCAGGCTGCTGCTTCTTCAAATGGACCAATTTTTTCTAAAGAGGAAGATAATGTTGGAGATACAGAAGTAGCTTTGACGACAGGCCACAGCCAATTATTTCAAAACCTGGGAAAAGAAGCTACTTCTACTGACGTGGCTACGAAAGAGGAGCAACAGACTGATGTATTCCCTGTTAAGTCAGACCAAGGAGCAGATTCTAGTACTCAAAAGAATCCTAGAAGTGATTCTACAGCTGATAAGGGAAAGGCTGTTGCATCTGATGGAAGCCAATCTAAGGTTCCTCCACAAGCAAACTCTCCCCAGCCGCCCAAGGATACAGCCTCTGCCAGGAAATATTATGGACCGTTGTTTGATTTTCCCTTTTTCACTCGAAAACTTGACTCTTATGGGTCTGCAACAGCCAATGCCAATAACAATCTCACATTAGCATATGATATTAAAGATCTGATTTGTGAAGAAGGTGCAGAGTTCCTTAGTAAGAAAAGAACAGACAGTTTGAAGAAGATAAATGGTCTGCTAGCAAAAAATTTAGAAAGGAAAAGGATTAGGCCTGATCTTGTTTTACGGCTTCAAATTGAAGAGAAAAAGCTTAGGCTATCTGATCTTCAGTCTCGTGTTAGAGAGGAAGTAGATCGACAACAACAGGAGATAATGTCCATGCCGGATAGGCCGTACCGCAAATTTGTGAGGTTATGCGAACGGCAACGCCTAGAAATGAATAGACAAGTACTGGCCAATCAGAAAGCTGTCAGAGAGAAGCAGCTGAAAACCATTTTTCAGTGGCGTAAGAAACTCCTTGAGGCTCATTGGGCTATACGTGATGCACGCACTGCTCGTAACAGGGGAGTGGCCAAATACCATGAAAAGATGTTGAGAGAGTTTTCAAAGAGAAAAGATGATGGCCGCAACAAAAGGATGGAGGCCTTGAAGAATAATGATGTAGAAAGATACAGGGAGATGTTGCTGGAACAGCAAACTAATATGCCTGGTGATGCTGCTGAAAGATATGCTGTTCTCTCTTCATTTTTGACCCAAACCGAAGATTATCTTCATAAACTTGGAGGTAAGATTACTGCCACAAAAAATCAACAGGAAGTGGAGGAGGCAGCAAATGCTGCAGCAGTAGCAGCGAGATTGCAGGGGTTGTCAGAAGAAGAGGTCAGGGCAGCAGCTACTTGTGCTCGAGAAGAAGTTGTGATCAGAAATAGATTTACGGAAATGAATGCGCCAAAAGAAAATTCATCTGTCAACAAGTACTATACTCTGGCTCATGCTGTAAATGAAGTGGTTGTAAGACAACCTTCAATGCTTCAGGCTGGAACTTTGCGTGATTACCAGCTGGTTGGATTACAATGGATGCTATCGTTGTATAATAACAAATTAAACGGGATCTTGGCTGATGAGATGGGTCTTGGAAAAACTGTTCAGGTAATGGCACTGATTGCTTACCTTATGGAGTTTAAAGGGAATTATGGACCGCATCTCATCATCGTTCCCAATGCTGTTCTGGTGAATTGGAAGAGTGAACTCCATACTTGGCTGCCATCTGTTTCATGCATATATTATGTTGGTACAAAGGATCAACGTTCAAAATTGTTCTCTCAGGTAAAATTTGAAAAATTCAATGTCCTCGTTACGACTTATGAGTTCATTATGTATGATCGATCAAAACTCTCAAAAGTTGACTGGAAATATATTATAATTGATGAAGCACAACGGATGAAGGACAGAGAATCTGTTTTGGCCCGAGATCTTGACCGGTATCGCTGCCAGAGGAGATTACTTCTCACTGGAACACCTTTGCAGAACGATCTGAAAGAGCTTTGGTCACTATTGAACCTTCTCCTTCCTGATGTCTTTGACAATCGAAAAGCATTTCATGATTGGTTTGCGCAACCCTTTCAAAAAGAAGGTCCTGCGCATAATATAGAAGATGACTGGCTGGAGACTGAAAAAAAGGTCATAGTCATTCACAGACTTCATCAAATTTTAGAGCCATTCATGCTCAGACGCCGTGTTGAGGATGTGGAAGGGTCACTTCCTGCTAAGGTTTCTGTAGTCTTACGATGTAGAATGTCTGCTATTCAGAGTGCCGTTTATGATTGGATTAAAGCGACTGGAACTCTTAGAGTTGATCCAGACGATGAAAAACTTAGGGCTCAAAAGAATCCGATATACCAAGCCAAGATATATAGAACTTTAAATAATAGGTGCATGGAGTTGAGGAAAGCCTGCAATCATCCTTTGCTCAATTATCCATATTTCAATGACTTTTCCAAAGATTTCCTCGTAAGGTCATGTGGAAAATTGTGGATTCTGGACAGGATCCTTATAAAGCTACAGAGGACAGGCCATCGTGTATTGCTCTTCAGTACAATGACTAAACTTCTTGATATCTTGGAAGAGTATCTACAATGGAGAAGGCTTGTATACAGAAGAATTGATGGGACTACCAGCCTAGAAGATCGGGAATCAGCTATTGTGGACTTCAATGATCCTGATACGGATTGCTTTATCTTCTTGCTTAGTATACGTGCAGCTGGACGGGGTCTCAACCTTCAGACTGCTGACACAGTTGTTATATATGATCCTGATCCAAATCCCAAGAATGAGGAACAAGCAGTTGCCAGAGCCCATCGTATAGGGCAGACAAGGGAAGTAAAAGTGATTTATATGGAGGCAGTTGTTGAAAAACTCTCCAGCCATCAAAAGGAGGACGAGCTTAGAAGTGGTGGTTCAGTAGACCTAGAGGATGACATGGCTGGGAAGGACCGATATATAGGATCTATAGAGGGTCTCATAAGGAATAATATTCAACAGTATAAGATTGACATGGCTGATGAGGTCATTAATGCTGGTCGTTTTGACCAAAGGACAACTCATGAAGAGCGACGAATGACATTGGAGACTTTATTGCATGACGAAGAGAGATATCAAGAAACTGTCCATGATGTACCTTCTCTGCATGAGGTGAACAGAATGATTGCCAGAAGCGAGGAGGAAGTTGAGTTATTTGATCAGATGGATGAAGAATTTGACTGGACGGAGGAGATGACTAATCATGAGCAGGTGCCTAAGTGGCTTCGAGCTAGTACCAGAGAGGTGAATGCTACTGTTGCTGATTTGTCTAAGAAACCGTCAAAGAACATGTTGTCTAGCAGTAACCTGATTGTACAACCTGGTGGACCTGGAGGTGAGAGAAAAAGGGGCCGGCCCAAGAGCAAAAAGATTAACTACAAGGAAATTGAAGATGACATTGCAGGTTACTCTGAGGAAAGCTCTGAGGAAAGGAACATTGATTCTGGGAATGAAGAAGAGGGAGATATTCGACAATTTGATGATGATGAACTTACTGGCGCTCTTGGAGATCATCAAACCAACAAGGGAGAATTTGATGGAGAGAACCCCGTCTGTGGTTATGATTATCCTCCGGGTTCTGGTAGTTATAAAAAAAATCCTCCTCGTGATGATGCTGGTTCGTCAGGATCTTCTCCAGAGAGCCATAGATCGAAAGAAATGGCATCTCCTGTTTCTTCACAAAAGTTTGGCTCTTTGTCTGCATTGGACACTAGGCCAGGTTCTGTCTCTAAAAGACTGCTGGATGACCTAGAAGAGGGGGAAATAGCAGCATCAGGGGATTCTCACATAGATCTCCAACGATCAGGAAGTTGGGCCCATGACCGTGATGAAGGGGATGAAGAACAGGTTCTGCAACCTACGATAAAACGGAAACGGAGTATTCGTCTAAGACCCCGTCAGACGGCAGAAAGAGTTGACGGTAGTGAGATGCCTGCAGCTCAGCCATTGCAAGTGGATCGTAGCTACCGATCAAAGTTAAGGACAGTTGTTGACTCGCATAGTTCAAGACAAGATCAGAGTGATTCGTCCTCGAGACTAAGGAGTGTACCTGCAAAGAAGGTAGCTAGTACTTCCAAACTCCATGTCTCATCACCAAAATCTGGTAGATTGAATGCTACACAGCTTACCGTGGAGGATAACGCTGAAGCTTCCAGAGAAACATGGGATGGAACTAGTCCTATTAGCTCTTCAAATGCTGGTGCAAGAATGTCCCACATCATACAGAAACGGTGCAAAATCGTGATTAGCAAGCTCCAGAGGAGAATCGACAAGGAAGGTCAGCAGATTGTACCTATGCTGACAAATTTGTGGAAGAGAATTCAGAATGGTTATGCAGCTGGAGGTGTAAATAACCTTTTGGAACTACGAGAGATAGACCACCGGGTAGAAAGACTAGAGTATGCAGGAGTTATGGAACTCGCATCTGACGTGCAGTTAATGCTAAGGGGAGCAATGCAATTCTATGGGTTTTCACATGAGGTGAGATCTGAAGCAAAGAAGGTTCACAATCTGTTCTTTGATCTATTAAAGATGTCTTTCCCAGACACAGATTTCCGGGAAGCAAGGAATGCTCTTTCCTTTTCTGGCTCAGCCCCAACTTTGGTGTCTACACCAACCCCAAGAGGAGCAGGAATTAGCCAAGGCAAGAGGCAAAAGTTAGTAAACGAGCCGGAAACCGAGCCAAGCTCTCCTCAGAGATCTCAACAACGTGAGAACTCAAGGATCAGAGTACAGATACCGCAGAAAGAAACAAAGCTTGGGGGGACAACAAGCCACACTGATGAATCCCCAATATTAGCTCATCCAGGGGAATTAGTAATCTGCAAGAAAAAGAGGAAAGACCGAGAGAAGTCTGGTCCGAAAACCCGAACTGGTGGCTCCAGCAGCCCAGTTTCACCACCTCCAGCAATGATTGGTCGTGGTCTTAGAAGTCCTGTGTCTGGTGGAGTTCCAAGGGAAACAAGGCTAGCACAACAGCAGCGGTGGCCAAACCAACCCACTCATCCAAACAACAGCGGTGCGGCCGGTGATTCTGTGGGATGGGCAAATCCGGTGAAGAGGTTAAGGACAGATTCTGGTAAAAGACGGCCTAGCCATTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009653 GO:0009987 GO:0010199 GO:0010468 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0032502 GO:0040029 GO:0043044 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048646 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060147 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070920 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090691 GO:0097159 GO:1900034 GO:1900036 GO:1901363 GO:1903798

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Bromodomain Helicase_C QLQ SNF2_N

Protein Analysis

2192

Amino Acids

245.44

Weight (kDa)

8.98

Isoelectric Point (pI)

56.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	980 - 1139	4.2e-09	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	984 - 1287	1.1e-84	SNF2-related domain
DEAD	PF00270	1001 - 1143	1.4e-08	DEAD/DEAH box helicase
Helicase_C	PF00271	1308 - 1421	7.7e-23	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0006097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020
fragaria_vesca	FvH4_7g14720
malus_domestica	MD01G1065800.v1.1 MD07G1134800.v1.1
prunus_persica	Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1
pyrus_communis	pycom01g09500 pycom01g09510 pycom07g13210
rosa_chinensis	RchiOBHm_Chr1g0356661
rosa_laevigata	RLG00000028089
rosa_multiflora	Rmu_sc0013188.1_g000005 Rmu_sc0037764.1_g000001
rosa_roxburghii	Rroxscaffold_4G00299450
rosa_rugosa	Rorug01G0250400
rosa_samantha	Rh1AG264300 Rh1BG231900 Rh1CG247900 Rh1DG259500
rosa_wichuraiana	Rw1G023380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	3317, 3950, 5064
AarI	CACCTGC	2 cut(s)	649, 4675
Acc16I	TGCGCA	2 cut(s)	3510, 3537
Acc36I	ACCTGC	4 cut(s)	649, 4675, 4868, 5533
Acc65I	GGTACC	1 cut(s)	665
AccB1I	GGYRCC	2 cut(s)	665, 4687
AccB7I	CCANNNNNTGG	2 cut(s)	1429, 5576
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	4 cut(s)	4047, 4147, 4359, 6083
AccII	CGCG	2 cut(s)	594, 796
AccIII	TCCGGA	1 cut(s)	1471
AclI	AACGTT	1 cut(s)	3202
AcoI	YGGCCR	7 cut(s)	42, 1105, 2349, 2466, 2518, 6461, 6498
AcuI	CTGAAG	9 cut(s)	839, 1331, 1548, 2207, 2912, 3970, 4160, 5640, 5985
AcyI	GRCGYC	2 cut(s)	164, 3628
AflIII	ACRYGT	1 cut(s)	4764
AgeI	ACCGGT	1 cut(s)	3375
AhdI	GACNNNNNGTC	1 cut(s)	1065
AhlI	ACTAGT	1 cut(s)	5648
AjiI	CACGTC	3 cut(s)	75, 1750, 5905
AjuI	GAANNNNNNNTTGG	8 cut(s)	1653, 1685, 1878, 1910, 2839, 2871, 6216, 6248
AleI	CACNNNNGTG	1 cut(s)	769
AloI	GAACNNNNNNTCC	2 cut(s)	3024, 3056
Alw21I	GWGCWC	1 cut(s)	2800
AlwNI	CAGNNNCTG	6 cut(s)	160, 1429, 1940, 5198, 5326, 6551
Ama87I	CYCGRG	3 cut(s)	2799, 3363, 5506
Aor13HI	TCCGGA	1 cut(s)	1471
ApaI	GGGCCC	2 cut(s)	30, 5293
ArsI	GACNNNNNNTTYG	6 cut(s)	1192, 1224, 3514, 3546, 5544, 5576
AseI	ATTAAT	1 cut(s)	4467
AsiGI	ACCGGT	1 cut(s)	3375
Asp700I	GAANNNNTTC	3 cut(s)	1097, 1840, 5322
Asp718I	GGTACC	1 cut(s)	665
AspA2I	CCTAGG	1 cut(s)	1274
AspLEI	GCGC	6 cut(s)	796, 1312, 2845, 3511, 3538, 4976
AsuC2I	CCSGG	4 cut(s)	279, 5049, 5858, 6032
AsuNHI	GCTAGC	2 cut(s)	2134, 6442
AvaI	CYCGRG	3 cut(s)	2799, 3363, 5506
AvrII	CCTAGG	1 cut(s)	1274
AxyI	CCTNAGG	1 cut(s)	1168
BaeGI	GKGCMC	2 cut(s)	30, 5293
BaeI	ACNNNNGTAYC	2 cut(s)	1668, 1701
BalI	TGGCCA	3 cut(s)	2351, 2468, 6463
BamHI	GGATCC	1 cut(s)	3942
BanI	GGYRCC	2 cut(s)	665, 4687
BanII	GRGCYC	5 cut(s)	30, 284, 3778, 4252, 5293
BarI	GAAGNNNNNNTAC	4 cut(s)	1828, 1860, 4011, 4043
BauI	CACGAG	2 cut(s)	2229, 5079
BbsI	GAAGAC	1 cut(s)	1587
Bbv12I	GWGCWC	1 cut(s)	2800
BbvCI	CCTCAGC	3 cut(s)	297, 327, 651
BceAI	ACGGC	6 cut(s)	2198, 2272, 2333, 3615, 3695, 5394
BcgI	CGANNNNNNTGC	4 cut(s)	569, 603, 5414, 5448
BciVI	GTATCC	2 cut(s)	1140, 1924
BclI	TGATCA	2 cut(s)	2814, 4633
BcnI	CCSGG	4 cut(s)	279, 5049, 5858, 6032
BcuI	ACTAGT	1 cut(s)	5648
BfmI	CTRYAG	8 cut(s)	1181, 1511, 1845, 2733, 3672, 3956, 4404, 5409
BfoI	RGCGCY	2 cut(s)	1313, 4977
BfuAI	ACCTGC	4 cut(s)	649, 4675, 4868, 5533
BfuI	GTATCC	2 cut(s)	1140, 1924
BglI	GCCNNNNNGGC	2 cut(s)	2284, 4696
BglII	AGATCT	6 cut(s)	1559, 2059, 3367, 5266, 5960, 6173
BlnI	CCTAGG	1 cut(s)	1274
BlpI	GCTNAGC	4 cut(s)	429, 720, 5415, 6064
BmcAI	AGTACT	4 cut(s)	1819, 2346, 2873, 5545
BmeRI	GACNNNNNGTC	1 cut(s)	1065
BmeT110I	CYCGRG	3 cut(s)	2799, 3363, 5506
BmgBI	CACGTC	3 cut(s)	75, 1750, 5905
BmrI	ACTGGG	1 cut(s)	6359
BmtI	GCTAGC	2 cut(s)	2138, 6446
BmuI	ACTGGG	1 cut(s)	6359
BpiI	GAAGAC	1 cut(s)	1587
BplI	GAGNNNNNCTC	4 cut(s)	4880, 4912, 6146, 6178
Bpu10I	CCTNAGC	6 cut(s)	297, 327, 651, 2207, 3663, 5918
Bpu1102I	GCTNAGC	4 cut(s)	429, 720, 5415, 6064
BpuEI	CTTGAG	2 cut(s)	2435, 6178
BpuMI	CCSGG	4 cut(s)	279, 5049, 5858, 6032
Bsa29I	ATCGAT	2 cut(s)	810, 3280
BsaAI	YACGTR	2 cut(s)	2435, 4151
BsaBI	GATNNNNATC	2 cut(s)	4209, 4215
BsaHI	GRCGYC	2 cut(s)	164, 3628
BsaI	GGTCTC	2 cut(s)	4172, 4418
BsaWI	WCCGGW	4 cut(s)	668, 1471, 3375, 6526
BsaXI	ACNNNNNCTCC	8 cut(s)	1279, 1309, 1389, 1419, 2255, 2285, 5344, 5374
Bse118I	RCCGGY	4 cut(s)	937, 3375, 4827, 6500
Bse21I	CCTNAGG	1 cut(s)	1168
Bse3DI	GCAATG	6 cut(s)	786, 901, 4872, 5420, 5934, 6390
Bse8I	GATNNNNATC	2 cut(s)	4209, 4215
BseAI	TCCGGA	1 cut(s)	1471
BseCI	ATCGAT	2 cut(s)	810, 3280
BseJI	GATNNNNATC	2 cut(s)	4209, 4215
BseMI	GCAATG	6 cut(s)	786, 901, 4872, 5420, 5934, 6390
BseSI	GKGCMC	2 cut(s)	30, 5293
BseX3I	CGGCCG	1 cut(s)	6498
BseYI	CCCAGC	2 cut(s)	1917, 4379
BsgI	GTGCAG	4 cut(s)	134, 2100, 4173, 5927
Bsh1236I	CGCG	2 cut(s)	594, 796
Bsh1285I	CGRYCG	1 cut(s)	6501
BshNI	GGYRCC	2 cut(s)	665, 4687
BshTI	ACCGGT	1 cut(s)	3375
BshVI	ATCGAT	2 cut(s)	810, 3280
BsiEI	CGRYCG	1 cut(s)	6501
BsiHKAI	GWGCWC	1 cut(s)	2800
BsiHKCI	CYCGRG	3 cut(s)	2799, 3363, 5506
BslFI	GGGAC	6 cut(s)	1053, 1327, 1375, 4078, 5671, 6253
BsmBI	CGTCTC	1 cut(s)	279
BsmFI	GGGAC	6 cut(s)	1053, 1327, 1375, 4078, 5671, 6253
BsmI	GAATGC	5 cut(s)	1225, 2845, 4729, 5593, 6049
Bso31I	GGTCTC	2 cut(s)	4172, 4418
BsoBI	CYCGRG	3 cut(s)	2799, 3363, 5506
Bsp120I	GGGCCC	2 cut(s)	26, 5289
Bsp1286I	GDGCHC	6 cut(s)	30, 284, 2800, 3778, 4252, 5293
Bsp13I	TCCGGA	1 cut(s)	1471
Bsp1407I	TGTACA	1 cut(s)	4789
Bsp1720I	GCTNAGC	4 cut(s)	429, 720, 5415, 6064
Bsp19I	CCATGG	1 cut(s)	45
BspDI	ATCGAT	2 cut(s)	810, 3280
BspEI	TCCGGA	1 cut(s)	1471
BspFNI	CGCG	2 cut(s)	594, 796
BspHI	TCATGA	3 cut(s)	3496, 4498, 4678
BspMAI	CTGCAG	3 cut(s)	1185, 2737, 5413
BspMI	ACCTGC	4 cut(s)	649, 4675, 4868, 5533
BspOI	GCTAGC	2 cut(s)	2138, 6446
BspQI	GCTCTTC	3 cut(s)	3989, 4497, 5668
BspT107I	GGYRCC	2 cut(s)	665, 4687
BspTNI	GGTCTC	2 cut(s)	4172, 4418
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	6 cut(s)	786, 901, 4872, 5420, 5934, 6390
BsrFI	RCCGGY	4 cut(s)	937, 3375, 4827, 6500
BsrGI	TGTACA	1 cut(s)	4789
BssAI	RCCGGY	4 cut(s)	937, 3375, 4827, 6500
BssNAI	GTATAC	2 cut(s)	4048, 4148
BssNI	GRCGYC	2 cut(s)	164, 3628
BssSI	CACGAG	2 cut(s)	2229, 5079
BssT1I	CCWWGG	7 cut(s)	45, 1108, 1274, 1801, 1926, 6115, 6428
Bst1107I	GTATAC	2 cut(s)	4048, 4148
Bst2BI	CACGAG	2 cut(s)	2229, 5079
BstACI	GRCGYC	2 cut(s)	164, 3628
BstAPI	GCANNNNNTGC	7 cut(s)	781, 2447, 2729, 2732, 3059, 5914, 6044
BstAUI	TGTACA	1 cut(s)	4789
BstBAI	YACGTR	2 cut(s)	2435, 4151
BstDSI	CCRYGG	2 cut(s)	45, 5604
BstENI	CCTNNNNNAGG	3 cut(s)	1539, 1942, 5228
BstFNI	CGCG	2 cut(s)	594, 796
BstH2I	RGCGCY	2 cut(s)	1313, 4977
BstHHI	GCGC	6 cut(s)	796, 1312, 2845, 3511, 3538, 4976
BstMCI	CGRYCG	1 cut(s)	6501
BstNSI	RCATGY	3 cut(s)	980, 1034, 4768
BstSFI	CTRYAG	8 cut(s)	1181, 1511, 1845, 2733, 3672, 3956, 4404, 5409
BstSLI	GKGCMC	2 cut(s)	30, 5293
BstUI	CGCG	2 cut(s)	594, 796
BstV2I	GAAGAC	1 cut(s)	1587
BstXI	CCANNNNNNTGG	2 cut(s)	841, 2960
BstZ17I	GTATAC	2 cut(s)	4048, 4148
BstZI	CGGCCG	1 cut(s)	6498
Bsu15I	ATCGAT	2 cut(s)	810, 3280
Bsu36I	CCTNAGG	1 cut(s)	1168
BsuI	GTATCC	2 cut(s)	1140, 1924
BsuTUI	ATCGAT	2 cut(s)	810, 3280
BtgI	CCRYGG	2 cut(s)	45, 5604
BtrI	CACGTC	3 cut(s)	75, 1750, 5905
BtsI	GCAGTG	2 cut(s)	22, 2445
BtsIMutI	CAGTG	7 cut(s)	22, 776, 2402, 2445, 3053, 3405, 6252
BveI	ACCTGC	4 cut(s)	649, 4675, 4868, 5533
CaiI	CAGNNNCTG	6 cut(s)	160, 1429, 1940, 5198, 5326, 6551
CciI	TCATGA	3 cut(s)	3496, 4498, 4678
CfoI	GCGC	6 cut(s)	796, 1312, 2845, 3511, 3538, 4976
Cfr10I	RCCGGY	4 cut(s)	937, 3375, 4827, 6500
ClaI	ATCGAT	2 cut(s)	810, 3280
CseI	GACGC	3 cut(s)	153, 1525, 3636
CsiI	ACCWGGT	2 cut(s)	229, 4795
CspAI	ACCGGT	1 cut(s)	3375
DraI	TTTAAA	2 cut(s)	3079, 3819
DriI	GACNNNNNGTC	1 cut(s)	1065
EaeI	YGGCCR	7 cut(s)	42, 1105, 2349, 2466, 2518, 6461, 6498
EagI	CGGCCG	1 cut(s)	6498
Eam1105I	GACNNNNNGTC	1 cut(s)	1065
EciI	GGCGGA	1 cut(s)	36
EclXI	CGGCCG	1 cut(s)	6498
Eco130I	CCWWGG	7 cut(s)	45, 1108, 1274, 1801, 1926, 6115, 6428
Eco147I	AGGCCT	3 cut(s)	557, 2167, 2540
Eco24I	GRGCYC	5 cut(s)	30, 284, 3778, 4252, 5293
Eco31I	GGTCTC	2 cut(s)	4172, 4418
Eco32I	GATATC	3 cut(s)	997, 4012, 4550
Eco52I	CGGCCG	1 cut(s)	6498
Eco57I	CTGAAG	9 cut(s)	839, 1331, 1548, 2207, 2912, 3970, 4160, 5640, 5985
Eco81I	CCTNAGG	1 cut(s)	1168
Eco88I	CYCGRG	3 cut(s)	2799, 3363, 5506
EcoNI	CCTNNNNNAGG	3 cut(s)	1539, 1942, 5228
EcoO109I	RGGNCCY	4 cut(s)	26, 1244, 1362, 3530
EcoRI	GAATTC	2 cut(s)	967, 5793
EcoRV	GATATC	3 cut(s)	997, 4012, 4550
EcoT14I	CCWWGG	7 cut(s)	45, 1108, 1274, 1801, 1926, 6115, 6428
EcoT22I	ATGCAT	3 cut(s)	1036, 1225, 3176
EcoT38I	GRGCYC	5 cut(s)	30, 284, 3778, 4252, 5293
ErhI	CCWWGG	7 cut(s)	45, 1108, 1274, 1801, 1926, 6115, 6428
Esp3I	CGTCTC	1 cut(s)	279
FalI	AAGNNNNNCTT	6 cut(s)	2649, 2681, 2902, 2934, 3639, 3671
FaqI	GGGAC	6 cut(s)	1053, 1327, 1375, 4078, 5671, 6253
FauI	CCCGC	1 cut(s)	37
FauNDI	CATATG	1 cut(s)	2047
FbaI	TGATCA	2 cut(s)	2814, 4633
FblI	GTMKAC	4 cut(s)	4047, 4147, 4359, 6083
FriOI	GRGCYC	5 cut(s)	30, 284, 3778, 4252, 5293
FseI	GGCCGGCC	1 cut(s)	4831
FspI	TGCGCA	2 cut(s)	3510, 3537
GlaI	GCGC	6 cut(s)	795, 1311, 2844, 3510, 3537, 4975
GsaI	CCCAGC	2 cut(s)	1921, 4383
HaeII	RGCGCY	2 cut(s)	1313, 4977
HgaI	GACGC	3 cut(s)	153, 1525, 3636
HhaI	GCGC	6 cut(s)	796, 1312, 2845, 3511, 3538, 4976
Hin1I	GRCGYC	2 cut(s)	164, 3628
Hin6I	GCGC	6 cut(s)	794, 1310, 2843, 3509, 3536, 4974
HinP1I	GCGC	6 cut(s)	794, 1310, 2843, 3509, 3536, 4974
HincII	GTYRAC	4 cut(s)	2866, 3301, 5392, 5467
HindII	GTYRAC	4 cut(s)	2866, 3301, 5392, 5467
HindIII	AAGCTT	3 cut(s)	2204, 5622, 6230
Hpy99I	CGWCG	1 cut(s)	4512
HpyCH4IV	ACGT	7 cut(s)	74, 1749, 2434, 3202, 4150, 5904, 6184
HpySE526I	ACGT	7 cut(s)	74, 1749, 2434, 3202, 4150, 5904, 6184
Hsp92I	GRCGYC	2 cut(s)	164, 3628
HspAI	GCGC	6 cut(s)	794, 1310, 2843, 3509, 3536, 4974
KflI	GGGWCCC	1 cut(s)	1362
Kpn2I	TCCGGA	1 cut(s)	1471
KpnI	GGTACC	1 cut(s)	669
KroI	GCCGGC	2 cut(s)	937, 4827
KroNI	GCCGGC	2 cut(s)	939, 4829
Ksp22I	TGATCA	2 cut(s)	2814, 4633
LguI	GCTCTTC	3 cut(s)	3989, 4497, 5668
LmnI	GCTCC	7 cut(s)	1474, 1765, 1805, 5733, 5924, 6101, 6359
MabI	ACCWGGT	2 cut(s)	229, 4795
MaeII	ACGT	7 cut(s)	74, 1749, 2434, 3202, 4150, 5904, 6184
MaeIII	GTNAC	8 cut(s)	909, 1334, 2453, 3250, 3444, 3651, 4778, 4880
MbiI	CCGCTC	1 cut(s)	32
MhlI	GDGCHC	6 cut(s)	30, 284, 2800, 3778, 4252, 5293
MlsI	TGGCCA	3 cut(s)	2351, 2468, 6463
MluNI	TGGCCA	3 cut(s)	2351, 2468, 6463
MlyI	GAGTC	6 cut(s)	329, 1195, 1288, 1622, 1991, 5462
MmeI	TCCRAC	4 cut(s)	41, 1651, 2941, 5296
Mox20I	TGGCCA	3 cut(s)	2351, 2468, 6463
Mph1103I	ATGCAT	3 cut(s)	1036, 1225, 3176
MroI	TCCGGA	1 cut(s)	1471
MroNI	GCCGGC	2 cut(s)	937, 4827
MroXI	GAANNNNTTC	3 cut(s)	1097, 1840, 5322
MscI	TGGCCA	3 cut(s)	2351, 2468, 6463
MslI	CAYNNNNRTG	3 cut(s)	769, 5298, 6255
Msp20I	TGGCCA	3 cut(s)	2351, 2468, 6463
MspA1I	CMGCKG	9 cut(s)	83, 160, 1850, 2380, 2956, 4157, 5813, 6457, 6492
Mva1269I	GAATGC	5 cut(s)	1225, 2845, 4729, 5593, 6049
MvnI	CGCG	2 cut(s)	594, 796
NaeI	GCCGGC	2 cut(s)	939, 4829
NciI	CCSGG	4 cut(s)	279, 5049, 5858, 6032
NcoI	CCATGG	1 cut(s)	45
NdeI	CATATG	1 cut(s)	2047
NgoMIV	GCCGGC	2 cut(s)	937, 4827
NheI	GCTAGC	2 cut(s)	2134, 6442
NmuCI	GTSAC	3 cut(s)	909, 3444, 3651
NsbI	TGCGCA	2 cut(s)	3510, 3537
NsiI	ATGCAT	3 cut(s)	1036, 1225, 3176
NspI	RCATGY	3 cut(s)	980, 1034, 4768
OliI	CACNNNNGTG	1 cut(s)	769
PaeR7I	CTCGAG	2 cut(s)	2799, 5506
PagI	TCATGA	3 cut(s)	3496, 4498, 4678
PaqCI	CACCTGC	2 cut(s)	649, 4675
PceI	AGGCCT	3 cut(s)	557, 2167, 2540
PciI	ACATGT	1 cut(s)	4764
PciSI	GCTCTTC	3 cut(s)	3989, 4497, 5668
PcsI	WCGNNNNNNNCGW	4 cut(s)	2449, 5356, 5440, 5901
PctI	GAATGC	5 cut(s)	1225, 2845, 4729, 5593, 6049
PdiI	GCCGGC	2 cut(s)	939, 4829
PdmI	GAANNNNTTC	3 cut(s)	1097, 1840, 5322
PflFI	GACNNNGTC	2 cut(s)	4164, 5370
PflMI	CCANNNNNTGG	2 cut(s)	1429, 5576
PfoI	TCCNGGA	1 cut(s)	6030
PinAI	ACCGGT	1 cut(s)	3375
PleI	GAGTC	6 cut(s)	328, 1195, 1288, 1621, 1991, 5462
PpsI	GAGTC	6 cut(s)	328, 1195, 1288, 1621, 1991, 5462
Ppu21I	YACGTR	2 cut(s)	2435, 4151
PpuMI	RGGWCCY	3 cut(s)	1244, 1362, 3530
PscI	ACATGT	1 cut(s)	4764
PshBI	ATTAAT	1 cut(s)	4467
PsiI	TTATAA	3 cut(s)	3317, 3950, 5064
Psp1406I	AACGTT	1 cut(s)	3202
Psp5II	RGGWCCY	3 cut(s)	1244, 1362, 3530
PspFI	CCCAGC	2 cut(s)	1917, 4379
PspOMI	GGGCCC	2 cut(s)	26, 5289
PspPPI	RGGWCCY	3 cut(s)	1244, 1362, 3530
PstI	CTGCAG	3 cut(s)	1185, 2737, 5413
PstNI	CAGNNNCTG	6 cut(s)	160, 1429, 1940, 5198, 5326, 6551
PsyI	GACNNNGTC	2 cut(s)	4164, 5370
PvuII	CAGCTG	6 cut(s)	160, 1850, 2380, 2956, 4157, 5813
RigI	GGCCGGCC	1 cut(s)	4831
RseI	CAYNNNNRTG	3 cut(s)	769, 5298, 6255
SapI	GCTCTTC	3 cut(s)	3989, 4497, 5668
ScaI	AGTACT	4 cut(s)	1819, 2346, 2873, 5545
SchI	GAGTC	6 cut(s)	329, 1195, 1288, 1622, 1991, 5462
SduI	GDGCHC	6 cut(s)	30, 284, 2800, 3778, 4252, 5293
SexAI	ACCWGGT	2 cut(s)	229, 4795
SfcI	CTRYAG	8 cut(s)	1181, 1511, 1845, 2733, 3672, 3956, 4404, 5409
Sfr274I	CTCGAG	2 cut(s)	2799, 5506
SlaI	CTCGAG	2 cut(s)	2799, 5506
SmiMI	CAYNNNNRTG	3 cut(s)	769, 5298, 6255
SmlI	CTYRAG	4 cut(s)	2414, 2799, 5506, 6193
SmoI	CTYRAG	4 cut(s)	2414, 2799, 5506, 6193
SpeI	ACTAGT	1 cut(s)	5648
SseBI	AGGCCT	3 cut(s)	557, 2167, 2540
SspI	AATATT	3 cut(s)	1952, 4429, 6270
StuI	AGGCCT	3 cut(s)	557, 2167, 2540
StyI	CCWWGG	7 cut(s)	45, 1108, 1274, 1801, 1926, 6115, 6428
TaiI	ACGT	7 cut(s)	77, 1752, 2437, 3205, 4153, 5907, 6187
TaqII	GACCGA	2 cut(s)	4404, 6333
TatI	WGTACW	7 cut(s)	1817, 2344, 2871, 3989, 4789, 5543, 6205
TauI	GCSGC	3 cut(s)	1924, 2523, 6500
TscAI	CASTG	7 cut(s)	22, 776, 2402, 2452, 3060, 3412, 6259
TseFI	GTSAC	3 cut(s)	909, 3444, 3651
Tsp45I	GTSAC	3 cut(s)	909, 3444, 3651
TspGWI	ACGGA	7 cut(s)	528, 2846, 3349, 4136, 4676, 5359, 5365
TspRI	CASTG	7 cut(s)	22, 776, 2402, 2452, 3060, 3412, 6259
Tth111I	GACNNNGTC	2 cut(s)	4164, 5370
Van91I	CCANNNNNTGG	2 cut(s)	1429, 5576
VspI	ATTAAT	1 cut(s)	4467
XagI	CCTNNNNNAGG	3 cut(s)	1539, 1942, 5228
XbaI	TCTAGA	1 cut(s)	305
XceI	RCATGY	3 cut(s)	980, 1034, 4768
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1072, 3121
XhoI	CTCGAG	2 cut(s)	2799, 5506
XmaJI	CCTAGG	1 cut(s)	1274
XmiI	GTMKAC	4 cut(s)	4047, 4147, 4359, 6083
XmnI	GAANNNNTTC	3 cut(s)	1097, 1840, 5322
ZrmI	AGTACT	4 cut(s)	1819, 2346, 2873, 5545
Zsp2I	ATGCAT	3 cut(s)	1036, 1225, 3176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.