Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0006097

Physical Location & Seq

Genomic Coordinates Forward (+)

12946101 .. 12956983

Gene Structure 10883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g14720.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6762 bp

ATGCAATCCGGCGGCGGAGGTGGGCCCGGACGGACGGGAAGGGCTACGTCGACGTCGTCGGCTGCGTCGCCGTCGTCGTCGTCTTCGGCGGTGTCGACGCCGCACTTGGGGTTTGATTCGGTGCAGCAGCAGCAGCATCAGCAACAGCAGCAGCAGCAAAGACAGCAATTGCAACAGCAATTCTTAAGAAAGCCTGAAGGGAATGAAGCTCTTCTAGCATATCAAGCTGCTGCTTTTCAAGGAGCTATGGGTGGGAACAATTTTGTTTCAGCTCCTGGATCTTCTCAAATGCCTCAACAACCTAGGAAGTTCATGGATATGGCTCAACAGCATGGCTCACAGGAGGGCCAGAATAGGAGTCAAGGTGTTGACCAGCAAGTGCTAAATCCAGTCCATCAAGCTTATCTTCAGTATGCTTTTCAGGCTGCACAGCAGAAGTCTGGTTTGGCAATGCAGTCACAGCAGCAAAATAAAATGGGGATGTTGGGGCCTCCATCTGGAAAGGATCAAGACATGCGGTCAGGAAATTTGAAGATGCAGGAATTCAATTCTATGCAGGCAGCTAACCAGGCACAAGCATCATCTTCAAAAAACTTGTCATCAAAGAACTCATTGGAGCATTTTTCTCGTGGAGAAAAGCAGATGGACCAAGGACAGCCACCAGCTTCGGACCAAAGGAGTGAATCTAAGCCTTCAGCCCAGCCAGCAACCGGAGGGCAATTCATGCCTGGAAATCTCATGAGGCCAATGATGGCTCCACAGCAAAGCATGCAAAATATGCAAAACAACCAGATGGCATTGGCTGCTCAGTTGCAAGCAATTGCACTTGAGCACAATATTGATCTTTCACAACCCAACGTGATGGCACAGCTAATTCCAATTGTGCAGTCTAGGATGGCTGCTCAACAAAAGGCAAATGAGAGCAACATGGGTGCACAATCATCTTCTGCTCCAGTATCAAAGCAGCAAGTTACTTCTCCTCAAGTTGCAAATGAAAGTTCTCCTCGTGCTAATTCATCGAGTGATGTATCTGGGCAGTCAGGATCTGCAAAAGCAAGGCAGCCAGTTTCACCTAGCCCTTTTGGCTCTGGTTCAAATAGTGCGATGTTTAACAATAATAACAACATCCCTATGCAGCAGTTTTCTGTTCATGGCAGAGAAAACCAGATGCCTCCTAGGCAGTCTGTTCCTTTTGGAAATGGAATGGCTCCTACCCATCCCACACACCCATCTACAAACACAAGCCAAGGTCCCGATCAATCTGTGCAAGTAAAAACTGTACCTAACAATCCAGAATCATCACAGATGCAATACCCCAGGCAGTTGAATCGTTCTTCTCCACAGGCTGTGGTTCCTAATGATGGGGGTTCGGGCAGTGCTCAGTCACAAGGTGGACCAGCTCCTCAGGTGCCACAACAACGCCCTGGATTCACCAAACAGCAGCTGCATGTTCTCAAAGCACAAATACTAGCATTTAGGCGAATCAAGAAAGGTGAAGGTACACTCCCTCAAGAACTTCTTCGGGCTATCGCTCCCCCACCTCTAGAGCAACAGCTACAGCAACAAAGTCTTCCTGGAGGAAGTATTCAGGAGAAATCTTCTGGGAAAATTGTAGAAGAACATGCTGTGGAGTCCCAAGAAAAAGATTCACATTTACAGGCTGTTGCATCAGTGAATGGACAGAATATTTCAAAGGAGGAAGCTCTTACAGGAGATGAGAAAGCAAGTGTATCAACAGTTCATGTGCATGGAATGCCTGCTGTGGTGAAGGAACCTACTCCTGTTGTGTCTTTGGTAAAAGAACAACATTCTACTGTAGCTTCAGTTAAGTCGGATCATGAAGTTGAACGAAGTAGTCAAAAAGATTCTGTCAAAAGTGACTTTTCTGTAGATAGGGGAAAGTCTATTGCACCACAAGTTGCTGTATCTGATGCCATGCAACTTAAAAAGCCTGCACAAGCAACGTCCGCACCCCAGCCAAAAGATGCGGGTTCTGTCAGAAAGTATCATGGACCGCTTTTTGATTTCCCCTTTTTCACTAGGAAACATGACTCCTTTGGTTCAGCAATGATGGTAAACAACAACAGCAACAACAGTAATAATAATAATCTAACATTGGCATATGATGTCAAAGACCTTCTTTTTGAGGAAGGTGCAGAAGTCCTTAACAAGAAGCGGACAGAAAATATAAAGAAGATTGGTGGTCTATTAGCGGTAAACTTGGAGAGGAAAAGGATTAGGCCAGATCTTGTCTTGCGGTTGCAAATTGAAGAAAAAAAACTCCGTCTTGTGGATTTTCAGGCACGCTTAAGAGATGAAATTGATCAACAACAGCAAGAGATAATGGCAATGCCTGACAGGCCTTACCGGAAGTTTGTTCGTCTTTGTGAGCGGCAGCGTATGGAGCTAGCTAGGCAAGTGCAGGCCTCTCAGAAAGCTATGAGAGAGAAGCAACTTAAATCTATTTTTCAGTGGCGTAAGAGGCTTCTTGAAGCTCACTGGTCCATTCGTGATGCACGAACTGCACGCAACAGGGGAGTTGCCAAATATCATGAGAAAATGTTGAGGGAGTTTTCAAAAAGAAAGGATGATGATAGAAGCAGAAGAATGGAAGCATTGAAGAATAATGATGTTGAAAGGTACAGGGAAATGTTGCTGGAACAGCAGACTAGTATTACAGGGGATGCAGCTGAGAGATATGCTGTTCTTTCATCATTCCTTAGTCAGACAGAGGAATATCTCCATAAGCTTGGGAGTAAAATAACAGCTGCAAAGAATCAGCAGGAAGTGGAAGAGGCAGCAAATGCTGCTGCAGCTGCTGCTCGTTTGCAGGGTCTGTCTGAGGAAGAAGTTAGGGTGGCAGCTGCTTGTGCTGGAGAGGAAGTATTGATTAGAAATCGGTTTATAGAAATGAATGCACCTAGAGATAGTTCATCTGTGAACAAGTATTATAGTCTTGCACATGCTGTGAATGAAAGAGTCATAAGACAACCATCAATGTTACGGACTGGAACCTTAAGAGACTATCAACTTGTTGGGCTCCAGTGGATGCTTTCTCTGTATAACAACAAATTAAACGGAATATTGGCAGATGAAATGGGTCTTGGGAAAACTGTACAGGTAATGGCATTGATTGCATATTTGATGGAGTTCAAAGGGAATTATGGACCACATCTCATAATTGTTCCAAACGCTGTTTTGGTAAATTGGAAGAGTGAGTTGCATACTTGGCTTCCCTCTGTCTCCTGTATTTATTATGTTGGGAGCAAGGATCAACGATCGAAATTGTTTTCTCAAGAGGTTTGCGCCTTGAAGTTTAATGTCCTTGTGACAACTTATGAGTTCATCATGTATGATCGCTCCAAACTATCAAAAATTGATTGGAAATATATAATAATTGATGAAGCACAAAGGATGAAAGACAGGGAATCGGTTCTAGCACGTGATCTTGATAGGTATCGTTGCCAACGGCGCTTGCTTTTGACTGGAACACCATTGCAGAATGATTTGAAGGAACTCTGGTCACTTTTAAATCTGCTTCTTCCAGAAGTATTTGATAATCGCAAAGCATTTCATGACTGGTTTTCTAAACCATTTCAAAGGGAGGCTCCTACACCAGACGCAGAGGATGATTGGCTTGAGACTGAAAAAAAGGTCATCATTATTCATCGACTCCATCAAATATTAGAGCCATTTATGCTTAGGCGGCGTGTTGAAGATGTTGAAGGCGCACTTCCACCTAAGATCTCCATAGTTTTAAGGTGTAGAATGTCAGCTATTCAAAGTGCTGTATATGATTGGATAAAATCAACAGGCACCATTCGAGTTGATCCTGAAGACGAGAAGCTTAGGGTCCAAAAGAATCCACTTTATCAGCCCAAGGTGTATAAGACCTTAAATAATAGGTGTATGGAGCTTCGGAAAACTTGCAATCATCCTCTGCTTAATTACCCATACTTCAATGATTTTTCGAAGGATTTTCTCATAAGATCATGTGGGAAATTGTGGATCCTGGATAGGATCCTAATTAAACTTCAGAGAACAGGGCATCGAGTACTTCTTTTCAGTACCATGACAAAACTCCTTGATATATTGGAGGAGTACTTGCAGTGGAGGCGACTTGTATACAGAAGAATTGATGGAACAACCAGTTTAGAAGATCGTGAGTCAGCTATAGTGGATTTTAACAGCCCTGGTTCGGACTGCTTCATCTTCTTGCTTAGTATTCGTGCAGCTGGTCGGGGTCTTAATCTCCAGTCTGCAGATACAGTTGTCATATATGATCCTGATCCAAACCCTAAAAATGAAGAACAGGCAGTTGCTAGAGCCCATCGTATTGGACAGAAGAGAGAAGTAAAAGTCATTTATATGGAAGCAGTTGTTGACAAAATCCCTAGCCATCAGAAAGAGGATGAACTAAGAACTGGAGGCACTGTTGATTCAGAGGATGACCTTGCTGGTAAGGATCGATATATGGGATCAATTGAGAGCCTCATAAGAAATAATATTCAACAATACAAGATAGACATGGCTGATGAGGTTATCAATGCTGGGCGTTTTGACCAGAGAACTACTCATGAAGAGCGACGGATGACTCTGGAAACTTTACTGCATGACGACGAGAGGTATCAAGAAACTCTCCATGATGTTCCCTCATTGCAGGAGGTAAATCGCATGATTGCAAGAAGTGAAGAAGAAGTTGAATTGTTTGATCAAATGGACGAAGAATATGACTGGATTGAGGAGATGACGAGGTATGATCAGGTTCCAAAATGGCTTCGTACTAGTACAAGAGAAGTAAATACTGTGATTGCTAGTTTATCGAAACGACCATCTAAGAACACTTTGTTGGGTGGAAATATTGGTGTGGAGTCGAGTGAAGTGGGATCTGAAACTGAAAGAAAGAGGGGCCGTCCCAAGAAAAAGCGTCTCAGCTATAAGGAAGTAGATGAGGAAACTGGAGAATACTCAGAAGCAAGTTCTGATGAGCGAAATGGATATCCTATGCATGAAGAGGAAGGAGAAGTAGGAGAATTAGAAGATGATGAATATAGTGGTGCTGTTGAGGCAACTCCAGTTGAAGATAAGGAACAAGTGGAAGAAGATGGTCCTGAATGTGATGGTGGGTATGATTATCCGCCGGCTTCAGAAAGAGTTGGAAATGATCTCATAGTCGAAGAAGCTGGTTCCTCAGGTTCGTCGTCAGACAGTCGGAGATTGATGCAGCCAGTTTCTCCTGTTTCCTCTCAGAAGTTCGGTTCCCTGTCTGCCTTAGATGGTAGGTCAGGATCTATTTCAAAGAGGCTGCCTGATGAAGTAGAGGAAGGGGAAATTGTTGTATCTGGAGATTCTCACATGGACCACCAACATTCTGGAAGTTGGAATCATGACCGTGAAGAAGGTGAAGATGAACAGGTTTTGCAACCCAAGATCAAGAGGAAGCGTAGTCTTAGGGTTCGCCCCCGTCATACCATAGAAAGGCCCGAAGAGAAGTCTGGTAGTGAGACACAATCTGTCCAACGTGGAGATTCTTCTTTGTTACCTTTCCAAGTGGACCATAAATCTCAACCACATACAAGGGCTGATCCTGAATTGAAAACATATGGGGAATCCAGTGCTTTGAAGCATGACCAAAGTGATTCATCCTCAAAACGGCGAAATTTGCCCACAAGGAGAGCTGCTAGTGCATCAAAATTGCACCCTTCAGCCAAATCTGGCAGATTGAATAACATGTCTGATCCTGCAGATGCTGATCACTACAGAGAAAATTGGGAAGGGAAAGTTGCGCATACAAGTGGGACTTCAGGTTATGTTACAAAAATGCCGGACATCATACAGAGAAGGTGCAAGAATGTAATTAGCAAGCTCCAGAGGAGAATAGATAAGGAAGGTCCTCAAATAGTACCTTTACTCACAGATTTGTGGAAGCGGATCGAAAATTCTGGGTACACAAGTGGATTGGCAAATAACATCATTGATTTACGAAAAATTGATCAGCGCATAGAGCGGTTAGAATATAGTGGAGTGATGGAGCTTGTTTTTGATGTCCAGTCTATGTTGAAAAGTTCAATGCAATATTATGGGTTCTCACATGAGGTACGAACTGAAGCCAGGAAAGTCCATGATCTTTTCTTTGATATCTTGAAAATTGCCTTTGCTGACACCGACTTTCGAGAAGCCAGAAGTGCTCTTTCTTTTAGTAGCCCGGTTGTGGCCACCAATGCTCTATCCCCAAGACCAGGTGTTGGACAAACCAAAAGACACAAATTGATAAATGAGGTGGAACCTGACCCCAGCCCTCAACAGAAGCTACAACGGGGACCTATTATCGGTAGTGAAGAAACAAGGGTAAGAAGCCATATTCCCCAGAAGGAATCAAGACTTGGAAGCGGAAGTGGTAGTAGTCGGGAGCACTATCAGCCAGATGATTCTCCATTGCTTGCTCATCCAGGAGATCTGGTTATTTGCAAGAAGAAGAGAAAAGACAGGGAAAAGACGGGGGTAAAAACTAGGAACGGACCAGCTGGTCCTGTTTCGCCCCCTAGCATGGGTCGCGGTATTAGAAGTCCCGGGCCAAATTCAGTCTCAAGGGAGACGAGATCAACCCAACAGGCATCGCATTCACAAGGGTGGGCCAACCAGCCTTCTCAGCCTGCTCAGCCTGCTCAGCCTGCAAACAGGGGTGCGGGATCAGTTGGCTGGGCAAATCCGGTAAAGAGGTTAAGGACGGACTCTGGAAAGAGAAGGCCAAGCCATTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009653 GO:0009987 GO:0010199 GO:0010468 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0032502 GO:0040029 GO:0043044 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048646 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060147 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070920 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090691 GO:0097159 GO:1900034 GO:1900036 GO:1901363 GO:1903798

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Bromodomain Helicase_C QLQ SNF2_N

Protein Analysis

2254

Amino Acids

252.82

Weight (kDa)

8.77

Isoelectric Point (pI)

58.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	477 - 510	5.5e-08	QLQ
ResIII	PF04851	1005 - 1165	2e-08	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	1009 - 1313	3.1e-84	SNF2-related domain
DEAD	PF00270	1026 - 1169	1.7e-07	DEAD/DEAH box helicase
Helicase_C	PF00271	1334 - 1447	1.5e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020
fragaria_vesca	FvH4_7g14720
malus_domestica	MD01G1065800.v1.1 MD07G1134800.v1.1
prunus_persica	Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1
pyrus_communis	pycom01g09500 pycom01g09510 pycom07g13210
rosa_chinensis	RchiOBHm_Chr1g0356661
rosa_laevigata	RLG00000028089
rosa_multiflora	Rmu_sc0013188.1_g000005 Rmu_sc0037764.1_g000001
rosa_roxburghii	Rroxscaffold_4G00299450
rosa_rugosa	Rorug01G0250400
rosa_samantha	Rh1AG264300 Rh1BG231900 Rh1CG247900 Rh1DG259500
rosa_wichuraiana	Rw1G023380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	6760
AasI	GACNNNNNNGTC	1 cut(s)	6525
AatII	GACGTC	1 cut(s)	56
Acc16I	TGCGCA	1 cut(s)	5787
AccB1I	GGYRCC	2 cut(s)	1408, 3815
AccB7I	CCANNNNNTGG	1 cut(s)	6245
AccBSI	CCGCTC	2 cut(s)	2392, 6007
AccI	GTMKAC	3 cut(s)	50, 95, 4125
AccII	CGCG	1 cut(s)	6555
AcoI	YGGCCR	1 cut(s)	6213
AcsI	RAATTY	5 cut(s)	526, 542, 5659, 5938, 6577
AcvI	CACGTG	1 cut(s)	3443
AcyI	GRCGYC	2 cut(s)	53, 98
AdeI	CACNNNGTG	1 cut(s)	1391
AflII	CTTAAG	3 cut(s)	184, 2308, 3016
AflIII	ACRYGT	1 cut(s)	5730
AhdI	GACNNNNNGTC	1 cut(s)	517
AhlI	ACTAGT	2 cut(s)	2669, 4784
AjuI	GAANNNNNNNTTGG	8 cut(s)	428, 460, 3087, 3119, 4832, 4864, 6366, 6398
AleI	CACNNNNGTG	1 cut(s)	6628
Alw21I	GWGCWC	5 cut(s)	834, 937, 1381, 6190, 6414
Alw26I	GTCTC	7 cut(s)	3015, 3247, 3635, 4934, 5498, 6587, 6589
Alw44I	GTGCAC	1 cut(s)	933
AlwNI	CAGNNNCTG	6 cut(s)	275, 1046, 1444, 2819, 2836, 5750
Ama87I	CYCGRG	1 cut(s)	6569
ApaI	GGGCCC	1 cut(s)	27
ApaLI	GTGCAC	1 cut(s)	933
ApoI	RAATTY	5 cut(s)	526, 542, 5659, 5938, 6577
ArsI	GACNNNNNNTTYG	4 cut(s)	581, 613, 2126, 2158
Asp700I	GAANNNNTTC	3 cut(s)	210, 1518, 3432
AspA2I	CCTAGG	2 cut(s)	302, 1175
AspLEI	GCGC	5 cut(s)	3308, 3474, 3731, 5788, 6000
AsuC2I	CCSGG	4 cut(s)	27, 6206, 6570, 6571
AsuHPI	GGTGA	5 cut(s)	1062, 1423, 1505, 1777, 5414
AsuII	TTCGAA	1 cut(s)	3971
AsuNHI	GCTAGC	1 cut(s)	2407
AvaI	CYCGRG	1 cut(s)	6569
AvrII	CCTAGG	2 cut(s)	302, 1175
AxyI	CCTNAGG	2 cut(s)	1404, 5191
BaeGI	GKGCMC	2 cut(s)	27, 937
BaeI	ACNNNNGTAYC	4 cut(s)	4257, 4290, 5938, 5971
BalI	TGGCCA	1 cut(s)	6215
BamHI	GGATCC	2 cut(s)	4008, 4020
BanI	GGYRCC	2 cut(s)	1408, 3815
BanII	GRGCYC	3 cut(s)	27, 3042, 4330
BauI	CACGAG	2 cut(s)	627, 1005
BbrPI	CACGTG	1 cut(s)	3443
BbsI	GAAGAC	3 cut(s)	75, 1562, 3843
Bbv12I	GWGCWC	5 cut(s)	834, 937, 1381, 6190, 6414
BceAI	ACGGC	4 cut(s)	55, 3485, 4896, 5669
BcgI	CGANNNNNNTGC	4 cut(s)	608, 642, 1310, 1344
BclI	TGATCA	5 cut(s)	2323, 4711, 4759, 5752, 5992
BcnI	CCSGG	4 cut(s)	27, 6206, 6570, 6571
BcoDI	GTCTC	7 cut(s)	3015, 3247, 3635, 4934, 5498, 6587, 6589
BcuI	ACTAGT	2 cut(s)	2669, 4784
BfmI	CTRYAG	8 cut(s)	1556, 1815, 1887, 2811, 4173, 4260, 5742, 5758
BfoI	RGCGCY	1 cut(s)	3475
BfrI	CTTAAG	3 cut(s)	184, 2308, 3016
BglI	GCCNNNNNGGC	3 cut(s)	1083, 1177, 2359
BglII	AGATCT	3 cut(s)	2245, 3744, 6454
BlnI	CCTAGG	2 cut(s)	302, 1175
BlpI	GCTNAGC	2 cut(s)	6657, 6666
BmcAI	AGTACT	2 cut(s)	4056, 4103
BmeRI	GACNNNNNGTC	1 cut(s)	517
BmeT110I	CYCGRG	1 cut(s)	6569
BmtI	GCTAGC	1 cut(s)	2411
BpiI	GAAGAC	3 cut(s)	75, 1562, 3843
BplI	GAGNNNNNCTC	2 cut(s)	4558, 4590
Bpu10I	CCTNAGC	2 cut(s)	3701, 3848
Bpu1102I	GCTNAGC	2 cut(s)	6657, 6666
Bpu14I	TTCGAA	1 cut(s)	3971
BpuEI	CTTGAG	6 cut(s)	848, 966, 1494, 3279, 3659, 6571
BpuMI	CCSGG	4 cut(s)	27, 6206, 6570, 6571
Bsa29I	ATCGAT	1 cut(s)	4468
BsaAI	YACGTR	1 cut(s)	3443
BsaBI	GATNNNNATC	3 cut(s)	3456, 4287, 5751
BsaHI	GRCGYC	2 cut(s)	53, 98
BsaJI	CCNNGG	9 cut(s)	302, 649, 1175, 1246, 1316, 1423, 3879, 4192, 6569
BsaWI	WCCGGW	3 cut(s)	710, 2367, 6709
BsaXI	ACNNNNNCTCC	8 cut(s)	349, 379, 2868, 2898, 4419, 4449, 6444, 6474
Bse118I	RCCGGY	1 cut(s)	5140
Bse21I	CCTNAGG	2 cut(s)	1404, 5191
Bse3DI	GCAATG	6 cut(s)	456, 2073, 2355, 3494, 4655, 6434
Bse8I	GATNNNNATC	3 cut(s)	3456, 4287, 5751
BseCI	ATCGAT	1 cut(s)	4468
BseDI	CCNNGG	9 cut(s)	302, 649, 1175, 1246, 1316, 1423, 3879, 4192, 6569
BseJI	GATNNNNATC	3 cut(s)	3456, 4287, 5751
BseMI	GCAATG	6 cut(s)	456, 2073, 2355, 3494, 4655, 6434
BseRI	GAGGAG	6 cut(s)	969, 993, 1392, 4112, 4757, 5887
BseSI	GKGCMC	2 cut(s)	27, 937
BseYI	CCCAGC	5 cut(s)	699, 1974, 4550, 6293, 6699
BsgI	GTGCAG	8 cut(s)	143, 411, 905, 1938, 2175, 2441, 2508, 4251
Bsh1236I	CGCG	1 cut(s)	6555
Bsh1285I	CGRYCG	1 cut(s)	3281
BshNI	GGYRCC	2 cut(s)	1408, 3815
BshVI	ATCGAT	1 cut(s)	4468
BsiEI	CGRYCG	1 cut(s)	3281
BsiHKAI	GWGCWC	5 cut(s)	834, 937, 1381, 6190, 6414
BsiHKCI	CYCGRG	1 cut(s)	6569
BsiSI	CCGG	9 cut(s)	9, 27, 711, 2368, 5141, 5825, 6206, 6570, 6710
BslFI	GGGAC	6 cut(s)	1236, 1618, 4899, 5812, 6333, 6552
BsmAI	GTCTC	7 cut(s)	3015, 3247, 3635, 4934, 5498, 6587, 6589
BsmBI	CGTCTC	2 cut(s)	4934, 6587
BsmFI	GGGAC	6 cut(s)	1236, 1618, 4899, 5812, 6333, 6552
BsmI	GAATGC	3 cut(s)	1758, 2920, 6619
BsoBI	CYCGRG	1 cut(s)	6569
Bsp119I	TTCGAA	1 cut(s)	3971
Bsp120I	GGGCCC	1 cut(s)	23
Bsp1286I	GDGCHC	8 cut(s)	27, 834, 937, 1381, 3042, 4330, 6190, 6414
Bsp1407I	TGTACA	1 cut(s)	3115
Bsp1720I	GCTNAGC	2 cut(s)	6657, 6666
BspDI	ATCGAT	1 cut(s)	4468
BspFNI	CGCG	1 cut(s)	6555
BspHI	TCATGA	6 cut(s)	738, 1837, 2551, 3574, 4576, 5386
BspMAI	CTGCAG	3 cut(s)	2815, 4264, 5746
BspOI	GCTAGC	1 cut(s)	2411
BspQI	GCTCTTC	2 cut(s)	216, 4575
BspT104I	TTCGAA	1 cut(s)	3971
BspT107I	GGYRCC	2 cut(s)	1408, 3815
BspTI	CTTAAG	3 cut(s)	184, 2308, 3016
BsrBI	CCGCTC	2 cut(s)	2392, 6007
BsrDI	GCAATG	6 cut(s)	456, 2073, 2355, 3494, 4655, 6434
BsrFI	RCCGGY	1 cut(s)	5140
BsrGI	TGTACA	1 cut(s)	3115
BssAI	RCCGGY	1 cut(s)	5140
BssECI	CCNNGG	9 cut(s)	302, 649, 1175, 1246, 1316, 1423, 3879, 4192, 6569
BssNAI	GTATAC	1 cut(s)	4126
BssNI	GRCGYC	2 cut(s)	53, 98
BssSI	CACGAG	2 cut(s)	627, 1005
BssT1I	CCWWGG	5 cut(s)	302, 649, 1175, 1246, 3879
Bst1107I	GTATAC	1 cut(s)	4126
Bst2BI	CACGAG	2 cut(s)	627, 1005
Bst6I	CTCTTC	8 cut(s)	216, 2787, 3206, 4340, 4575, 5007, 5481, 6470
BstACI	GRCGYC	2 cut(s)	53, 98
BstAFI	CTTAAG	3 cut(s)	184, 2308, 3016
BstAUI	TGTACA	1 cut(s)	3115
BstBAI	YACGTR	1 cut(s)	3443
BstBI	TTCGAA	1 cut(s)	3971
BstFNI	CGCG	1 cut(s)	6555
BstH2I	RGCGCY	1 cut(s)	3475
BstHHI	GCGC	5 cut(s)	3308, 3474, 3731, 5788, 6000
BstMAI	GTCTC	7 cut(s)	3015, 3247, 3635, 4934, 5498, 6587, 6589
BstMCI	CGRYCG	1 cut(s)	3281
BstNSI	RCATGY	6 cut(s)	517, 772, 1451, 1625, 2966, 5734
BstSFI	CTRYAG	8 cut(s)	1556, 1815, 1887, 2811, 4173, 4260, 5742, 5758
BstSLI	GKGCMC	2 cut(s)	27, 937
BstUI	CGCG	1 cut(s)	6555
BstV2I	GAAGAC	3 cut(s)	75, 1562, 3843
BstX2I	RGATCY	9 cut(s)	278, 1043, 2245, 3744, 4008, 4020, 4886, 5288, 6454
BstXI	CCANNNNNNTGG	4 cut(s)	862, 2750, 4337, 5372
BstYI	RGATCY	9 cut(s)	278, 1043, 2245, 3744, 4008, 4020, 4886, 5288, 6454
BstZ17I	GTATAC	1 cut(s)	4126
Bsu15I	ATCGAT	1 cut(s)	4468
Bsu36I	CCTNAGG	2 cut(s)	1404, 5191
BsuTUI	ATCGAT	1 cut(s)	4468
BtgZI	GCGATG	2 cut(s)	1118, 6600
BtsI	GCAGTG	2 cut(s)	1381, 4115
BtsIMutI	CAGTG	8 cut(s)	1381, 1677, 2477, 2497, 3050, 4115, 4431, 5620
CaiI	CAGNNNCTG	6 cut(s)	275, 1046, 1444, 2819, 2836, 5750
CciI	TCATGA	6 cut(s)	738, 1837, 2551, 3574, 4576, 5386
CfoI	GCGC	5 cut(s)	3308, 3474, 3731, 5788, 6000
Cfr10I	RCCGGY	1 cut(s)	5140
Cfr9I	CCCGGG	1 cut(s)	6569
ClaI	ATCGAT	1 cut(s)	4468
CseI	GACGC	4 cut(s)	54, 106, 3629, 4916
CsiI	ACCWGGT	1 cut(s)	6238
DraI	TTTAAA	1 cut(s)	3531
DraIII	CACNNNGTG	1 cut(s)	1391
DrdI	GACNNNNNNGTC	1 cut(s)	6525
DriI	GACNNNNNGTC	1 cut(s)	517
DseDI	GACNNNNNNGTC	1 cut(s)	6525
EaeI	YGGCCR	1 cut(s)	6213
Eam1104I	CTCTTC	8 cut(s)	216, 2787, 3206, 4340, 4575, 5007, 5481, 6470
Eam1105I	GACNNNNNGTC	1 cut(s)	517
EarI	CTCTTC	8 cut(s)	216, 2787, 3206, 4340, 4575, 5007, 5481, 6470
EciI	GGCGGA	2 cut(s)	30, 5127
Eco130I	CCWWGG	5 cut(s)	302, 649, 1175, 1246, 3879
Eco147I	AGGCCT	2 cut(s)	2362, 2426
Eco24I	GRGCYC	3 cut(s)	27, 3042, 4330
Eco32I	GATATC	2 cut(s)	5000, 6139
Eco72I	CACGTG	1 cut(s)	3443
Eco81I	CCTNAGG	2 cut(s)	1404, 5191
Eco88I	CYCGRG	1 cut(s)	6569
EcoO109I	RGGNCCY	4 cut(s)	488, 1250, 5891, 6320
EcoRI	GAATTC	1 cut(s)	542
EcoRV	GATATC	2 cut(s)	5000, 6139
EcoT14I	CCWWGG	5 cut(s)	302, 649, 1175, 1246, 3879
EcoT22I	ATGCAT	1 cut(s)	5010
EcoT38I	GRGCYC	3 cut(s)	27, 3042, 4330
ErhI	CCWWGG	5 cut(s)	302, 649, 1175, 1246, 3879
Esp3I	CGTCTC	2 cut(s)	4934, 6587
FaqI	GGGAC	6 cut(s)	1236, 1618, 4899, 5812, 6333, 6552
FauI	CCCGC	2 cut(s)	1981, 6679
FauNDI	CATATG	2 cut(s)	2122, 5602
FbaI	TGATCA	5 cut(s)	2323, 4711, 4759, 5752, 5992
FblI	GTMKAC	3 cut(s)	50, 95, 4125
FriOI	GRGCYC	3 cut(s)	27, 3042, 4330
FspI	TGCGCA	1 cut(s)	5787
GlaI	GCGC	5 cut(s)	3307, 3473, 3730, 5787, 5999
GsaI	CCCAGC	5 cut(s)	703, 1978, 4554, 6297, 6703
HaeII	RGCGCY	1 cut(s)	3475
HapII	CCGG	9 cut(s)	9, 27, 711, 2368, 5141, 5825, 6206, 6570, 6710
HgaI	GACGC	4 cut(s)	54, 106, 3629, 4916
HhaI	GCGC	5 cut(s)	3308, 3474, 3731, 5788, 6000
Hin1I	GRCGYC	2 cut(s)	53, 98
Hin6I	GCGC	5 cut(s)	3306, 3472, 3729, 5786, 5998
HinP1I	GCGC	5 cut(s)	3306, 3472, 3729, 5786, 5998
HincII	GTYRAC	4 cut(s)	51, 96, 370, 4384
HindII	GTYRAC	4 cut(s)	51, 96, 370, 4384
HindIII	AAGCTT	3 cut(s)	399, 2747, 3845
HpaII	CCGG	9 cut(s)	9, 27, 711, 2368, 5141, 5825, 6206, 6570, 6710
HphI	GGTGA	5 cut(s)	1062, 1423, 1505, 1777, 5414
HpyCH4IV	ACGT	6 cut(s)	47, 53, 858, 1964, 3442, 5521
HpySE526I	ACGT	6 cut(s)	47, 53, 858, 1964, 3442, 5521
Hsp92I	GRCGYC	2 cut(s)	53, 98
HspAI	GCGC	5 cut(s)	3306, 3472, 3729, 5786, 5998
KroI	GCCGGC	1 cut(s)	5140
KroNI	GCCGGC	1 cut(s)	5142
Ksp22I	TGATCA	5 cut(s)	2323, 4711, 4759, 5752, 5992
LguI	GCTCTTC	2 cut(s)	216, 4575
MabI	ACCWGGT	1 cut(s)	6238
MaeII	ACGT	6 cut(s)	47, 53, 858, 1964, 3442, 5521
MaeIII	GTNAC	9 cut(s)	456, 970, 1383, 1877, 3000, 3328, 3522, 5538, 5812
MbiI	CCGCTC	2 cut(s)	2392, 6007
MfeI	CAATTG	4 cut(s)	167, 819, 879, 4482
MflI	RGATCY	9 cut(s)	278, 1043, 2245, 3744, 4008, 4020, 4886, 5288, 6454
MhlI	GDGCHC	8 cut(s)	27, 834, 937, 1381, 3042, 4330, 6190, 6414
MlsI	TGGCCA	1 cut(s)	6215
MluNI	TGGCCA	1 cut(s)	6215
MlyI	GAGTC	9 cut(s)	367, 1640, 2045, 2988, 3666, 4175, 4588, 4880, 6725
MmeI	TCCRAC	6 cut(s)	1812, 5137, 5192, 5360, 5542, 6226
Mox20I	TGGCCA	1 cut(s)	6215
Mph1103I	ATGCAT	1 cut(s)	5010
MroNI	GCCGGC	1 cut(s)	5140
MroXI	GAANNNNTTC	3 cut(s)	210, 1518, 3432
MscI	TGGCCA	1 cut(s)	6215
MslI	CAYNNNNRTG	7 cut(s)	317, 1130, 1746, 4367, 5391, 5793, 6628
Msp20I	TGGCCA	1 cut(s)	6215
MspA1I	CMGCKG	7 cut(s)	1444, 2690, 2768, 2816, 2864, 4235, 6524
MspCI	CTTAAG	3 cut(s)	184, 2308, 3016
MspI	CCGG	9 cut(s)	9, 27, 711, 2368, 5141, 5825, 6206, 6570, 6710
MunI	CAATTG	4 cut(s)	167, 819, 879, 4482
Mva1269I	GAATGC	3 cut(s)	1758, 2920, 6619
MvnI	CGCG	1 cut(s)	6555
NaeI	GCCGGC	1 cut(s)	5142
NciI	CCSGG	4 cut(s)	27, 6206, 6570, 6571
NdeI	CATATG	2 cut(s)	2122, 5602
NgoMIV	GCCGGC	1 cut(s)	5140
NheI	GCTAGC	1 cut(s)	2407
NmuCI	GTSAC	5 cut(s)	456, 1383, 1877, 3328, 3522
NsbI	TGCGCA	1 cut(s)	5787
NsiI	ATGCAT	1 cut(s)	5010
NspI	RCATGY	6 cut(s)	517, 772, 1451, 1625, 2966, 5734
NspV	TTCGAA	1 cut(s)	3971
OliI	CACNNNNGTG	1 cut(s)	6628
PaeI	GCATGC	1 cut(s)	772
PagI	TCATGA	6 cut(s)	738, 1837, 2551, 3574, 4576, 5386
PceI	AGGCCT	2 cut(s)	2362, 2426
PciI	ACATGT	1 cut(s)	5730
PciSI	GCTCTTC	2 cut(s)	216, 4575
PcsI	WCGNNNNNNNCGW	5 cut(s)	53, 62, 74, 92, 2515
PctI	GAATGC	3 cut(s)	1758, 2920, 6619
PdiI	GCCGGC	1 cut(s)	5142
PdmI	GAANNNNTTC	3 cut(s)	210, 1518, 3432
PflFI	GACNNNGTC	1 cut(s)	55
PflMI	CCANNNNNTGG	1 cut(s)	6245
PfoI	TCCNGGA	4 cut(s)	274, 1573, 4011, 6448
Ple19I	CGATCG	1 cut(s)	3281
PleI	GAGTC	9 cut(s)	366, 1639, 2045, 2987, 3666, 4174, 4588, 4879, 6725
PmaCI	CACGTG	1 cut(s)	3443
PmlI	CACGTG	1 cut(s)	3443
PpsI	GAGTC	9 cut(s)	366, 1639, 2045, 2987, 3666, 4174, 4588, 4879, 6725
Ppu21I	YACGTR	1 cut(s)	3443
PpuMI	RGGWCCY	3 cut(s)	1250, 5891, 6320
PscI	ACATGT	1 cut(s)	5730
PsiI	TTATAA	1 cut(s)	6760
Psp5II	RGGWCCY	3 cut(s)	1250, 5891, 6320
PspCI	CACGTG	1 cut(s)	3443
PspFI	CCCAGC	5 cut(s)	699, 1974, 4550, 6293, 6699
PspOMI	GGGCCC	1 cut(s)	23
PspPPI	RGGWCCY	3 cut(s)	1250, 5891, 6320
PsrI	GAACNNNNNNTAC	2 cut(s)	1722, 1754
PstI	CTGCAG	3 cut(s)	2815, 4264, 5746
PstNI	CAGNNNCTG	6 cut(s)	275, 1046, 1444, 2819, 2836, 5750
PsuI	RGATCY	9 cut(s)	278, 1043, 2245, 3744, 4008, 4020, 4886, 5288, 6454
PsyI	GACNNNGTC	1 cut(s)	55
PvuI	CGATCG	1 cut(s)	3281
PvuII	CAGCTG	7 cut(s)	1444, 2690, 2768, 2816, 2864, 4235, 6524
RseI	CAYNNNNRTG	7 cut(s)	317, 1130, 1746, 4367, 5391, 5793, 6628
SalI	GTCGAC	2 cut(s)	49, 94
SapI	GCTCTTC	2 cut(s)	216, 4575
ScaI	AGTACT	2 cut(s)	4056, 4103
SchI	GAGTC	9 cut(s)	367, 1640, 2045, 2988, 3666, 4175, 4588, 4880, 6725
SduI	GDGCHC	8 cut(s)	27, 834, 937, 1381, 3042, 4330, 6190, 6414
SexAI	ACCWGGT	1 cut(s)	6238
SfcI	CTRYAG	8 cut(s)	1556, 1815, 1887, 2811, 4173, 4260, 5742, 5758
SfuI	TTCGAA	1 cut(s)	3971
SgrDI	CGTCGACG	1 cut(s)	49
SmaI	CCCGGG	1 cut(s)	6571
SmiMI	CAYNNNNRTG	7 cut(s)	317, 1130, 1746, 4367, 5391, 5793, 6628
SmlI	CTYRAG	9 cut(s)	184, 827, 981, 1509, 2308, 3016, 3294, 3638, 6586
SmoI	CTYRAG	9 cut(s)	184, 827, 981, 1509, 2308, 3016, 3294, 3638, 6586
SpeI	ACTAGT	2 cut(s)	2669, 4784
SphI	GCATGC	1 cut(s)	772
SseBI	AGGCCT	2 cut(s)	2362, 2426
SspI	AATATT	7 cut(s)	838, 1687, 3084, 3684, 4507, 4861, 6077
StuI	AGGCCT	2 cut(s)	2362, 2426
StyI	CCWWGG	5 cut(s)	302, 649, 1175, 1246, 3879
TaiI	ACGT	6 cut(s)	50, 56, 861, 1967, 3445, 5524
TatI	WGTACW	4 cut(s)	3115, 4054, 4101, 4787
TauI	GCSGC	4 cut(s)	15, 103, 2395, 3709
TscAI	CASTG	8 cut(s)	1381, 1677, 2477, 2504, 3050, 4115, 4438, 5620
TseFI	GTSAC	5 cut(s)	456, 1383, 1877, 3328, 3522
Tsp45I	GTSAC	5 cut(s)	456, 1383, 1877, 3328, 3522
TspGWI	ACGGA	7 cut(s)	46, 2273, 3019, 3093, 4603, 6531, 6743
TspMI	CCCGGG	1 cut(s)	6569
TspRI	CASTG	8 cut(s)	1381, 1677, 2477, 2504, 3050, 4115, 4438, 5620
Tth111I	GACNNNGTC	1 cut(s)	55
Van91I	CCANNNNNTGG	1 cut(s)	6245
Vha464I	CTTAAG	3 cut(s)	184, 2308, 3016
VneI	GTGCAC	1 cut(s)	933
XapI	RAATTY	5 cut(s)	526, 542, 5659, 5938, 6577
XbaI	TCTAGA	1 cut(s)	1543
XceI	RCATGY	6 cut(s)	517, 772, 1451, 1625, 2966, 5734
XcmI	CCANNNNNNNNNTGG	1 cut(s)	5369
XmaI	CCCGGG	1 cut(s)	6569
XmaJI	CCTAGG	2 cut(s)	302, 1175
XmiI	GTMKAC	3 cut(s)	50, 95, 4125
XmnI	GAANNNNTTC	3 cut(s)	210, 1518, 3432
ZraI	GACGTC	1 cut(s)	54
ZrmI	AGTACT	2 cut(s)	4056, 4103
Zsp2I	ATGCAT	1 cut(s)	5010

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.