Prupe.2G172900_v2.0.a1

ATP-dependent helicase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
21944505 .. 21955759
11255 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G172900.3

Sequence Viewer

Length: 6816 bp
ATGCAATCTGGTGGCGGAGGTGGAGGCGGGCCCAGCCGGAACCCGGGAGTGGGCCCCGCGGGTCGGGCTGGATCGACATCGTCGGCTGCTTCACCGTCTTCGTCGTCCTCGGCCGTGTCTACGCCACACTTGGGTTTCGATTCTGTGCAGCATCAACATCAACATCAGCAACAGCAGCAGCAGCAGCAGCAATTAGGGTCTAGGCAGTCATTACAACAGCAACAATTTTTAAGAAAACCTGAAGGGAATGAAGCTCTTCTAGCATATCAAGCTGCTGGTCTCCAAGGAGTTCTGGGAGGGAGCAATTTTGTTTCATCTCCTGGCTCCAGTCAAATGCCTCAACAATCTAGGAAGTTCATTGATTTGGCTCAACAACATGGCTCCCAGGATGGACAGAATAGGAGTCAAGGTGTTGACCAGCAAGTGTTAAATCCAGTTCATCAAGCTTATCTTCATTATGCTTTTCAGGCTGCCCAGCAGAAGTCAGGTTTGGCAATGCAATCTCAGCAGCAAGCTAAAATGGGATTGTTGGGGCCTCCATCTGGAAAAGACCAGGACATGCGATTGGGAAATATGAAAATGCAGGAACTCATGTCTATGCAGGCAGCTAATCAGGCACAAGCATCATCGTCTAAGAACTTGACGGAACATTTTACTCGTGGAGAAAAGCAGATGGACCAAGCACAGCCACCCTCTGACCAAAGGAGTGAATCAAAGCCTTCAGCCCAGCAGTCAGGCATAGGTCAATTCATGCCTGGAAATATGTTAAGGCCAATGCTGGCACCACAGGCTCAGCAAAGCACCCAAAACACGCCGAACAACCAGATTGCATTGGCTGCTCAGTTGCAAGCATTTGCGCTTGAGCACAACATTGATCTTTCACAGCCTGGAAATGCCAACTTGATGGCGCAGCTCATTCCATTGTTGCAGTCTAGGATGGCTGCTCAACAAAAGGCAAATGAAAGCAACATGGGTGTACAATCATCACCTGTTCCAGTGTCAAAGCAGCAGGTTACTTCTCCACCAGTTGTGAGTGAGAGTTCTCCGCATGCTAATTCATCAAGCGATGTATCTGGACAGTCTAGCTCTGCAAAAGCAAAGCAGACGGTTGCTCCTAGCCCATTTGGTTCAGGTTCAAATACTAGCATCTTTAACAATAGTAACAGCATTCCTGTGAAGCAGTTTGCTGTTCATGGCAGAGAAAACCAGATGCCTCCTAGGCAGTCGGTTCCTATTGGAAATGGAATGACTTCTATCCACCCCACACAGTCATCTGCAAACACAAGCCAGGGTGTGGATCACTCTTTCCACGGAAAAAGTCCACTGAACAATCCAGAAACATTGCAGATGCAATACCAGAAGCAGTTGAGTCGATCTTCTCCACAGGCTGTAGTTCCTAATGATGGGGGCTCTGGCAACCACGTACAGACACAAGGTGGACCGTCTACTCAGATGCCACAACAACGTCTTGGGTTCACCAAACAGCAGCTTCATGTTCTTAAAGCTCAAATACTAGCATTTAGGCGACTCAAGAAAGGTGAAGGCACACTCCCACAAGAACTTCTTCGGGCTATTGCTCCACCACCACTTGATCTGCAGCTACAGCAGCAATTGCTTCCTGGAGGAGGAAACATTCAGGATAAATCTTCTGGGAAAGTTATAGAAGATCACGTGCGGCATATGGAGTCCAATGAAAAAGATTCACAGGCTGTGGCATCAATAAATGCACAGAACGTTCCAAAAGAGGAAGCTTTTACTGGAGATGAGAAAGCAACTGTATCAACAGTTCATGTGCAAGGAACGCCCACTGCGTTGAAGGAACCTACTCCCGTGGTGTCTTCTGGAAAAGAAGAGCAGCATTCCACTTTATCTTCTGTTAAGTTGGACCATGAAGTTGAACGCAGTATTCAAAAAGCTCCTGTTAGAAGTGAGTTTCCAGTTGATAGGGGAAAGTCTGTTGCATCACAGGTTGCTGTATCTGATGCCATGCAAGTTAAGAAGCCTGCACAAGCAAGCACTGTACCCCAGCCAAAAGATGTTAGCTCTGCTAGAAAGTATCACGGACCACTGTTTGATTTCCCCTTTTTCACTAGGAAACATGACTCCTTTGGTTCAGGAGTGATGGTGAACAACAACAATACTAACAGCAATAATAATAATAATCTAACATTGGCATATGATGTCAAAGATCTTCTGTTTGAGGAAGGTGTGGAAGTTCTTAACAAGAAGAGAACAGAAAATATTAAGAAGATTGGTGGTCTATTGGCGGTAAATTTGGAGAGGAAAAGGATTAGGCCTGATCTTGTCTTGCGGTTGCAAATTGAAGAAAAAAAGCTTCGACTTTTAGATTTACAGGCGCGCTTAAGAGATGAAATTGATCAACAACAGCAGGAGATAATGGCAATGCCTGACAGGCCTTATAGGAAGTTTGTTCGGCTTTGTGAGCGTCAGCGGATGGAGCTAGCTAGGCAAGTGCAGGCCTCTCAGAAAGCCATGAGGGAGAAGCAACTGAAATCTATTTTCCAGTGGCGTAAGAAGCTACTTGAAGCTCACTGGGCCATTCGTGATGCACGGACTGCACGCAACAGGGGAGTTGCCAAATATCATGAGAGAATGTTGAGGGAGTTTTCAAAAAGAAAGGATGATGATAGGAGTAAAAGGATGGAAGCATTGAAGAATAATGATGTTGAAAGGTACAGGGAAATTTTGCTAGAACAGCAGACTAGTATTCCAGGGGATGCAGCGGAGAGATATGCGGTTCTATCATCATTTTTGAGTCAGACTGAGGAATATCTTCATAAGCTTGGAAGTAAAATAACAGCTGCCAAGAATCAACAGGAAGTGGAAGAGGCAGCAAATGCTGCTGCAGCTTCTGCACGGGTGCAGGGTCTCTCTGAGGAAGAAGTTAGGGCGGCAGCAGCTTGTGCTGGAGAGGAAGTACTGATTAGAAATCGATTTATAGAAATGAATGCACCTAGAGATAGTTCATCTGTTAACAAGTATTATAGTCTTGCACATGCTGTGAATGAAAGGGTCATAAGGCAACCCTCAATGTTACGGACTGGAAACTTAAGAGACTATCAACTTGTTGGGTTGCAATGGATGCTTTCTCTGTATAACAACAAGTTAAATGGAATATTGGCAGATGAAATGGGTCTTGGGAAAACTGTACAGGTGATGGCATTGATTGCATATTTAATGGAGTTCAAAGGGAACTATGGGCCGCATCTCATAATTGTTCCAAATGCTGTTTTGGTAAATTGGAAGAGTGAGTTGCATACTTGGCTTCCATCTGTGTCATGCATATATTATGTTGGTGGGAAGGATCAACGATCAAAATTATTTTCTCAAGAGGTTTGTGCCTTGAAGTTTAATGTCCTTGTGACAACTTATGAGTTCATCATGTATGATCGCTCCAAACTTTCAAAAATTGATTGGAAGTATATAATAATTGATGAAGCACAAAGGATGAAAGACAGGGAGTCGGTTCTAGCTCGTGACCTTGACAGGTATCGTTGCCAAAGGCGCTTGCTTTTGACAGGAACACCATTACAGAATGATTTGAAGGAACTCTGGTCACTATTAAATTTGCTTCTTCCAGAAGTATTTGATAATCGGAAAGCATTTCATGACTGGTTTTCGAAACCCTTTCAAAAGGAAGCTCCTACACCAAATGCAGAAGATGACTGGCTTGAGACTGAAAAGAAAGTTATCATCATCCACCGACTTCATCAAATTTTAGAGCCTTTTATGCTTAGGCGTCGTGTTGAAGACGTGGAAGGTGCACTTCCACCTAAGATCTCCATAGTTTTAAGGTGTAGAATGTCAGCTATTCAAAGTGCTGTATATGACTGGATCAAATCAACAGGCACTATTCGAGTAGATCCTGAAGAAGAGAAGCTCAGGGTTCAAAAGAATCCACTTTATCAGCCCAAAGTGTACAAAACCTTAAATAACAGATGTATGGAACTGCGAAAAACTTGCAATCATCCTTTGCTTAATTATCCATATTTCAATGATTTTTCCAAGGATTTCCTTATAAGATCCTGTGGGAAATTATGGATCCTGGATAGGATCCTTATTAAACTTCAGAGAACAGGGCATCGAGTACTTCTTTTTAGTACCATGACAAAACTCCTTGATATTTTGGAGGAATACTTGCAGTGGCGTCGACTTGTCTACAGAAGAATTGATGGAACAACCAGTTTAGAAGATCGTGAGTCAGCTATAGTGGATTTCAACAGCCCTGATTCGGACTGCTTCATCTTCTTGCTTAGTATTCGTGCAGCTGGTCGGGGTCTTAATCTCCAGTCTGCTGATACGGTTGTCATATATGATCCTGATCCAAACCCTAAAAATGAAGAACAGGCAGTTGCTAGAGCCCACCGCATTGGACAGAAGAGAGAAGTCAAGGTCATTTATATGGAAGCAGTTGTTGACAAAATCTCTAGCCATCAGAAGGAGGATGAACTAAGAAATGGAGGTACTGTTGATTCAGAGGATGACCTTGCTGGTAAGGATCGGTATATCGGATCAATTGAGAGCCTCATAAGAAACAACATTCAACAATACAAGATTGACATGGCTGATGAGGTTATCAATGCTGGGCGTTTTGACCAAAGAACCACACATGAAGAGCGACGTATGACTCTGGAAACCTTACTGCATGATGAAGAGAGGTACCAAGAAACTCTTCATGACGTTCCCTCTTTGCAGGAGGTAAATCGCATGATTGCTAGAAGCGAAGAAGAAGTTGAATTGTTTGATCAAATGGATGAAGAACTGGACTGGATTGAGGAGATGACTAAGTACAACCAGGTTCCCAAATGGCTTCGAACCGGTACAAGAGAAGTAAATGCTGTGATTGCTAGTTTATCAAAAAGACCATCTAAGAACACTTTGTTGGGTGGTAATATTGGCTTGGAGACCAGTGAAATGGGTTCTGATTCATCTCCAAAAACTGAAAGAAAGAGGGGGCGGCCCAAGGGGAAAAAGCATCCCAGCTATAAGGAGTTAGATGATGACAATGGTGAATACTCAGAAGCAAGTTCTGATGAGAGAAATGAATATTCTTTGCATGAAGAAGAGGGAGAAGTTGGAGAATTAGAGGATGATGAATATAGTGGTGCTGTTGAGGCAACACCAATTATTAAGGAACAAGTGGAAGAAGATGGCCCTGAATATGATGTTGGCTACGATTATCCCCAGGCTTCAGAAAGAGTTAGAAATAACCACATGCTAGAAGAAGCTGGTTCCTCAGGATCATCCTCAGACAGTCGGAGGTTGATGCAGACAGTGTCTCCTGTTTCTTCCCAGAAATTTGGTTCCCTGTCTGCCATAGATGGTAGGCCAGGATCTGTTTCAAAGAGGCTGCCTGATGATGTAGAGGAAGGTGAGATTGTCGTATCTGGGGATTCTCATATGGACCACCAACAATCTGGAAGTTGGAATCATGACCGCGATGAAGGTGAAGACGAACAGGTTTTGCAACCTAAGATCAAGAGGAAGCGTAGTCTTAGGGTTCGCCCTCGTCATACCATGGAAAGGCCAGAGGAGAAATCTGGTAGTGAGACGCCATCTCTCCAACGTGGAGATTCATCTCTGTTGCCCTTCCAAGCAGACCATAAATCTCAAACACAGTCAAGGGCTGATTCTGAAATCAAAATGTATGGAGATCCCCATGCTTTAAAACATGACCAAAGTGATTCATCCTCAAAAACTAGGCGAAGTTTGCCTGCAAGGAGAGTTGGTAACGCGTCAAAGTTGCATGCTTCACCTAAATCTGGCAGATCAAATAGCGTGCCTGATCCTGCAGAAGATGCTGCTGAACACCACAGAGAAAATTGGGATGGAAAAATCGGGAGTACGAGTGGAACTCCAGTTTATGGCACAAAAATGCCTGACATCATCCAGAGAAGGTGCAAGAATGTAATTAGCAAGCTCCAAAGGAGAATAGATAAGGAAGGTCCTCAAATAGTACCTTTACTAACAGATTTGTGGAAGCGCATTGAAAATGCTGGTTACGCAAGTGGATCTGGAAATAATATCTTGGATTTACGAAAGATTGATCAGCGGATAGAGAGGTTGGAGTATAATGGAGTGATGGAGCTTGTGTTTGACGTGCAGTCTATGTTGAAAAGTGCAATGCAATTTTATGGTTTTTCCCATGAGGTAAGAACTGAAGCCAGGAAAGTACATGATCTTTTCTTTGATATCTTGAAAATAGCATTTGCAGACACTGATTTTCGAGAAGCCAGAAGTGCACTCTCTTTTACTAGCCCAGTTTTGACCACTAATGCTCCATCCCCAAGACCGGTGACTGTTGGCCAAAGCAAGAGACACAAACATATAAATGAGGTGGAGCCTGACCCGGGTCCTCAACAGAAGCCACAACAACGTACTCCTATTTTCAGTAGCGAAGACACGAGGATGAGAAGCCATATGCCCCACAAGGAATCAAGACTTGGGAGTGGAAGTGGTAATAGTCGGGAGCACTATCAGCAGGATGATTCTCCACAGCTTGCTCATCCAGGGGATCTGGTTATCTGCAAGAAGAAGAGAAAAGACAGGGAAAAGTCCGTGGTAAAGCCTAGGACTGGATCAGCTGGCCCTGTTTCACCCCCAAGTATGGGTCGCAGTATTAAAAGTCCAGGTTCAAATTCGGTTCCAAAGGAGAGATTGACTCAACAAACCTCGCAAGGGTGGACCAACCAGCCTGCTCAGCCTTCGAATAAGGCTGCAGGGTCAGTTGGTTGGGCAAATCCCGTAAAGAGGTTACGGACAGACTCTGGAAAGAGAAGGCCAAGCCATTTATGA

Protein Analysis

2272

Amino Acids

254.69

Weight (kDa)

8.86

Isoelectric Point (pI)

59.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4040
Acc36I ACCTGC 1 cut(s) 1000
Acc65I GGTACC 1 cut(s) 4680
AccB1I GGYRCC 2 cut(s) 781, 4680
AccB7I CCANNNNNTGG 2 cut(s) 1294, 5885
AccI GTMKAC 4 cut(s) 119, 1445, 4171, 4179
AccII CGCG 4 cut(s) 59, 2359, 5460, 5756
AclI AACGTT 1 cut(s) 1734
AcoI YGGCCR 2 cut(s) 111, 6325
AcsI RAATTY 6 cut(s) 2272, 2703, 3586, 3735, 5318, 6658
AcuI CTGAAG 6 cut(s) 261, 705, 3909, 4073, 5196, 6201
AcvI CACGTG 1 cut(s) 1672
AcyI GRCGYC 3 cut(s) 3760, 4168, 5573
AdeI CACNNNGTG 1 cut(s) 1436
AflII CTTAAG 2 cut(s) 2362, 3070
AflIII ACRYGT 1 cut(s) 5754
AgeI ACCGGT 2 cut(s) 4838, 6313
AhdI GACNNNNNGTC 2 cut(s) 3481, 6124
AhlI ACTAGT 1 cut(s) 2723
AjiI CACGTC 2 cut(s) 3775, 6121
Alw21I GWGCWC 4 cut(s) 867, 3787, 6265, 6495
Alw26I GTCTC 8 cut(s) 284, 2894, 3069, 3689, 4919, 5304, 5564, 6331
Alw44I GTGCAC 2 cut(s) 3783, 6261
AlwNI CAGNNNCTG 4 cut(s) 2873, 5357, 6239, 6788
Ama87I CYCGRG 2 cut(s) 43, 6370
ApaI GGGCCC 2 cut(s) 33, 56
ApaLI GTGCAC 2 cut(s) 3783, 6261
ApoI RAATTY 6 cut(s) 2272, 2703, 3586, 3735, 5318, 6658
AsiGI ACCGGT 2 cut(s) 4838, 6313
Asp700I GAANNNNTTC 5 cut(s) 255, 1249, 1563, 2793, 4692
Asp718I GGTACC 1 cut(s) 4680
AspA2I CCTAGG 2 cut(s) 1217, 6590
AspLEI GCGC 6 cut(s) 859, 910, 2359, 2361, 3528, 6006
AsuC2I CCSGG 4 cut(s) 44, 45, 6371, 6372
AsuII TTCGAA 3 cut(s) 3641, 4834, 6728
AsuNHI GCTAGC 1 cut(s) 2461
AvaI CYCGRG 2 cut(s) 43, 6370
AvaII GGWCC 8 cut(s) 676, 1439, 1885, 2063, 5425, 5966, 6374, 6705
AvrII CCTAGG 2 cut(s) 1217, 6590
AxyI CCTNAGG 1 cut(s) 5257
BaeGI GKGCMC 4 cut(s) 33, 56, 3787, 6265
BaeI ACNNNNGTAYC 2 cut(s) 4311, 4344
BalI TGGCCA 1 cut(s) 6327
BamHI GGATCC 2 cut(s) 4062, 4074
BanI GGYRCC 2 cut(s) 781, 4680
BanII GRGCYC 4 cut(s) 33, 56, 1412, 4384
BauI CACGAG 3 cut(s) 657, 3495, 6424
BbrPI CACGTG 1 cut(s) 1672
BbsI GAAGAC 5 cut(s) 90, 1830, 3777, 5478, 6426
Bbv12I GWGCWC 4 cut(s) 867, 3787, 6265, 6495
BceAI ACGGC 1 cut(s) 98
BcgI CGANNNNNNTGC 6 cut(s) 1352, 1386, 3963, 3997, 4151, 4185
BclI TGATCA 3 cut(s) 2377, 4765, 6067
BcnI CCSGG 4 cut(s) 44, 45, 6371, 6372
BcoDI GTCTC 8 cut(s) 284, 2894, 3069, 3689, 4919, 5304, 5564, 6331
BcuI ACTAGT 1 cut(s) 2723
BfmI CTRYAG 8 cut(s) 1389, 1595, 1601, 2865, 4180, 4227, 5811, 6738
BfoI RGCGCY 1 cut(s) 3529
BfrI CTTAAG 2 cut(s) 2362, 3070
BfuAI ACCTGC 1 cut(s) 1000
BglI GCCNNNNNGGC 2 cut(s) 1219, 2413
BglII AGATCT 2 cut(s) 2188, 3798
BlnI CCTAGG 2 cut(s) 1217, 6590
BlpI GCTNAGC 2 cut(s) 792, 6720
BmcAI AGTACT 2 cut(s) 2940, 4110
Bme18I GGWCC 8 cut(s) 676, 1439, 1885, 2063, 5425, 5966, 6374, 6705
BmeRI GACNNNNNGTC 2 cut(s) 3481, 6124
BmeT110I CYCGRG 2 cut(s) 43, 6370
BmgBI CACGTC 2 cut(s) 3775, 6121
BmrI ACTGGG 2 cut(s) 2563, 6275
BmtI GCTAGC 1 cut(s) 2465
BmuI ACTGGG 2 cut(s) 2563, 6275
BoxI GACNNNNGTC 1 cut(s) 6372
BpiI GAAGAC 5 cut(s) 90, 1830, 3777, 5478, 6426
BplI GAGNNNNNCTC 4 cut(s) 5860, 5892, 6667, 6699
BpmI CTGGAG 6 cut(s) 310, 1641, 1779, 2949, 4292, 5862
Bpu10I CCTNAGC 2 cut(s) 3755, 3902
Bpu1102I GCTNAGC 2 cut(s) 792, 6720
Bpu14I TTCGAA 3 cut(s) 3641, 4834, 6728
BpuEI CTTGAG 4 cut(s) 881, 1514, 3333, 3713
BpuMI CCSGG 4 cut(s) 44, 45, 6371, 6372
Bsa29I ATCGAT 1 cut(s) 2953
BsaAI YACGTR 2 cut(s) 1423, 1672
BsaBI GATNNNNATC 2 cut(s) 76, 4341
BsaHI GRCGYC 3 cut(s) 3760, 4168, 5573
BsaI GGTCTC 3 cut(s) 284, 2894, 4919
BsaWI WCCGGW 2 cut(s) 4838, 6313
Bse118I RCCGGY 2 cut(s) 4838, 6313
Bse21I CCTNAGG 1 cut(s) 5257
Bse3DI GCAATG 5 cut(s) 501, 1340, 2409, 3104, 6150
Bse8I GATNNNNATC 2 cut(s) 76, 4341
BseCI ATCGAT 1 cut(s) 2953
BseJI GATNNNNATC 2 cut(s) 76, 4341
BseMI GCAATG 5 cut(s) 501, 1340, 2409, 3104, 6150
BsePI GCGCGC 1 cut(s) 2357
BseRI GAGGAG 3 cut(s) 1638, 4811, 5567
BseSI GKGCMC 4 cut(s) 33, 56, 3787, 6265
BseX3I CGGCCG 1 cut(s) 111
BseYI CCCAGC 6 cut(s) 32, 474, 726, 2025, 4604, 5000
BsgI GTGCAG 8 cut(s) 167, 1989, 2495, 2562, 2859, 2903, 4305, 6143
Bsh1236I CGCG 4 cut(s) 59, 2359, 5460, 5756
Bsh1285I CGRYCG 1 cut(s) 114
BshNI GGYRCC 2 cut(s) 781, 4680
BshTI ACCGGT 2 cut(s) 4838, 6313
BshVI ATCGAT 1 cut(s) 2953
BsiEI CGRYCG 1 cut(s) 114
BsiHKAI GWGCWC 4 cut(s) 867, 3787, 6265, 6495
BsiHKCI CYCGRG 2 cut(s) 43, 6370
BsiSI CCGG 5 cut(s) 37, 44, 4839, 6314, 6371
BsmAI GTCTC 8 cut(s) 284, 2894, 3069, 3689, 4919, 5304, 5564, 6331
BsmBI CGTCTC 1 cut(s) 5564
BsmI GAATGC 3 cut(s) 1167, 1858, 2974
Bso31I GGTCTC 3 cut(s) 284, 2894, 4919
BsoBI CYCGRG 2 cut(s) 43, 6370
Bsp119I TTCGAA 3 cut(s) 3641, 4834, 6728
Bsp120I GGGCCC 2 cut(s) 29, 52
Bsp1286I GDGCHC 8 cut(s) 33, 56, 867, 1412, 3787, 4384, 6265, 6495
Bsp1407I TGTACA 3 cut(s) 976, 3169, 3939
Bsp1720I GCTNAGC 2 cut(s) 792, 6720
Bsp19I CCATGG 1 cut(s) 5538
BspDI ATCGAT 1 cut(s) 2953
BspFNI CGCG 4 cut(s) 59, 2359, 5460, 5756
BspHI TCATGA 4 cut(s) 2605, 3628, 4696, 5452
BspMAI CTGCAG 4 cut(s) 1599, 2869, 5815, 6742
BspMI ACCTGC 1 cut(s) 1000
BspOI GCTAGC 1 cut(s) 2465
BspQI GCTCTTC 3 cut(s) 261, 1845, 4629
BspT104I TTCGAA 3 cut(s) 3641, 4834, 6728
BspT107I GGYRCC 2 cut(s) 781, 4680
BspTI CTTAAG 2 cut(s) 2362, 3070
BspTNI GGTCTC 3 cut(s) 284, 2894, 4919
BsrDI GCAATG 5 cut(s) 501, 1340, 2409, 3104, 6150
BsrFI RCCGGY 2 cut(s) 4838, 6313
BsrGI TGTACA 3 cut(s) 976, 3169, 3939
BssAI RCCGGY 2 cut(s) 4838, 6313
BssHII GCGCGC 1 cut(s) 2357
BssNI GRCGYC 3 cut(s) 3760, 4168, 5573
BssSI CACGAG 3 cut(s) 657, 3495, 6424
BssT1I CCWWGG 6 cut(s) 283, 1217, 4026, 4983, 5538, 6590
Bst2BI CACGAG 3 cut(s) 657, 3495, 6424
BstACI GRCGYC 3 cut(s) 3760, 4168, 5573
BstAFI CTTAAG 2 cut(s) 2362, 3070
BstAUI TGTACA 3 cut(s) 976, 3169, 3939
BstBAI YACGTR 2 cut(s) 1423, 1672
BstBI TTCGAA 3 cut(s) 3641, 4834, 6728
BstDSI CCRYGG 5 cut(s) 57, 1309, 1830, 5538, 6579
BstENI CCTNNNNNAGG 1 cut(s) 1623
BstFNI CGCG 4 cut(s) 59, 2359, 5460, 5756
BstH2I RGCGCY 1 cut(s) 3529
BstHHI GCGC 6 cut(s) 859, 910, 2359, 2361, 3528, 6006
BstMAI GTCTC 8 cut(s) 284, 2894, 3069, 3689, 4919, 5304, 5564, 6331
BstMCI CGRYCG 1 cut(s) 114
BstNSI RCATGY 5 cut(s) 562, 1052, 3020, 5239, 5771
BstPAI GACNNNNGTC 1 cut(s) 6372
BstSFI CTRYAG 8 cut(s) 1389, 1595, 1601, 2865, 4180, 4227, 5811, 6738
BstSLI GKGCMC 4 cut(s) 33, 56, 3787, 6265
BstUI CGCG 4 cut(s) 59, 2359, 5460, 5756
BstV2I GAAGAC 5 cut(s) 90, 1830, 3777, 5478, 6426
BstXI CCANNNNNNTGG 5 cut(s) 904, 4391, 4936, 5321, 5438
BstZI CGGCCG 1 cut(s) 111
Bsu15I ATCGAT 1 cut(s) 2953
Bsu36I CCTNAGG 1 cut(s) 5257
BsuTUI ATCGAT 1 cut(s) 2953
BtgI CCRYGG 5 cut(s) 57, 1309, 1830, 5538, 6579
BtgZI GCGATG 2 cut(s) 1080, 5475
BtrI CACGTC 2 cut(s) 3775, 6121
BtsI GCAGTG 2 cut(s) 1806, 4169
BveI ACCTGC 1 cut(s) 1000
CaiI CAGNNNCTG 4 cut(s) 2873, 5357, 6239, 6788
CciI TCATGA 4 cut(s) 2605, 3628, 4696, 5452
CfoI GCGC 6 cut(s) 859, 910, 2359, 2361, 3528, 6006
Cfr10I RCCGGY 2 cut(s) 4838, 6313
Cfr42I CCGCGG 1 cut(s) 60
Cfr9I CCCGGG 2 cut(s) 43, 6370
ClaI ATCGAT 1 cut(s) 2953
CseI GACGC 5 cut(s) 2435, 3749, 4157, 5581, 5745
CsiI ACCWGGT 1 cut(s) 4815
CspAI ACCGGT 2 cut(s) 4838, 6313
DraI TTTAAA 1 cut(s) 5688
DraIII CACNNNGTG 1 cut(s) 1436
DriI GACNNNNNGTC 2 cut(s) 3481, 6124
EaeI YGGCCR 2 cut(s) 111, 6325
EagI CGGCCG 1 cut(s) 111
Eam1105I GACNNNNNGTC 2 cut(s) 3481, 6124
EciI GGCGGA 1 cut(s) 30
EclXI CGGCCG 1 cut(s) 111
Eco130I CCWWGG 6 cut(s) 283, 1217, 4026, 4983, 5538, 6590
Eco147I AGGCCT 3 cut(s) 2296, 2416, 2480
Eco24I GRGCYC 4 cut(s) 33, 56, 1412, 4384
Eco31I GGTCTC 3 cut(s) 284, 2894, 4919
Eco32I GATATC 1 cut(s) 6214
Eco47I GGWCC 8 cut(s) 676, 1439, 1885, 2063, 5425, 5966, 6374, 6705
Eco52I CGGCCG 1 cut(s) 111
Eco57I CTGAAG 6 cut(s) 261, 705, 3909, 4073, 5196, 6201
Eco72I CACGTG 1 cut(s) 1672
Eco81I CCTNAGG 1 cut(s) 5257
Eco88I CYCGRG 2 cut(s) 43, 6370
EcoNI CCTNNNNNAGG 1 cut(s) 1623
EcoO109I RGGNCCY 4 cut(s) 53, 533, 5966, 6374
EcoRV GATATC 1 cut(s) 6214
EcoT14I CCWWGG 6 cut(s) 283, 1217, 4026, 4983, 5538, 6590
EcoT22I ATGCAT 1 cut(s) 3305
EcoT38I GRGCYC 4 cut(s) 33, 56, 1412, 4384
ErhI CCWWGG 6 cut(s) 283, 1217, 4026, 4983, 5538, 6590
Esp3I CGTCTC 1 cut(s) 5564
FalI AAGNNNNNCTT 8 cut(s) 435, 467, 1548, 1580, 3771, 3803, 4677, 4709
FauI CCCGC 3 cut(s) 20, 52, 64
FauNDI CATATG 4 cut(s) 1680, 2176, 5421, 6441
FbaI TGATCA 3 cut(s) 2377, 4765, 6067
FblI GTMKAC 4 cut(s) 119, 1445, 4171, 4179
FriOI GRGCYC 4 cut(s) 33, 56, 1412, 4384
GlaI GCGC 6 cut(s) 858, 909, 2358, 2360, 3527, 6005
GsaI CCCAGC 6 cut(s) 36, 478, 730, 2029, 4608, 5004
GsuI CTGGAG 6 cut(s) 310, 1641, 1779, 2949, 4292, 5862
HaeII RGCGCY 1 cut(s) 3529
HapII CCGG 5 cut(s) 37, 44, 4839, 6314, 6371
HgaI GACGC 5 cut(s) 2435, 3749, 4157, 5581, 5745
HhaI GCGC 6 cut(s) 859, 910, 2359, 2361, 3528, 6006
Hin1I GRCGYC 3 cut(s) 3760, 4168, 5573
Hin6I GCGC 6 cut(s) 857, 908, 2357, 2359, 3526, 6004
HinP1I GCGC 6 cut(s) 857, 908, 2357, 2359, 3526, 6004
HincII GTYRAC 4 cut(s) 415, 2995, 4172, 4438
HindII GTYRAC 4 cut(s) 415, 2995, 4172, 4438
HindIII AAGCTT 4 cut(s) 444, 1749, 2333, 2801
HpaI GTTAAC 1 cut(s) 2995
HpaII CCGG 5 cut(s) 37, 44, 4839, 6314, 6371
Hpy99I CGWCG 5 cut(s) 85, 106, 3765, 4173, 4644
Hsp92I GRCGYC 3 cut(s) 3760, 4168, 5573
HspAI GCGC 6 cut(s) 857, 908, 2357, 2359, 3526, 6004
KpnI GGTACC 1 cut(s) 4684
Ksp22I TGATCA 3 cut(s) 2377, 4765, 6067
KspAI GTTAAC 1 cut(s) 2995
KspI CCGCGG 1 cut(s) 60
LguI GCTCTTC 3 cut(s) 261, 1845, 4629
MabI ACCWGGT 1 cut(s) 4815
MfeI CAATTG 2 cut(s) 1610, 4536
MhlI GDGCHC 8 cut(s) 33, 56, 867, 1412, 3787, 4384, 6265, 6495
MlsI TGGCCA 1 cut(s) 6327
MluI ACGCGT 1 cut(s) 5754
MluNI TGGCCA 1 cut(s) 6327
MmeI TCCRAC 6 cut(s) 1863, 5077, 5258, 5426, 5608, 6066
Mox20I TGGCCA 1 cut(s) 6327
Mph1103I ATGCAT 1 cut(s) 3305
MroXI GAANNNNTTC 5 cut(s) 255, 1249, 1563, 2793, 4692
MscI TGGCCA 1 cut(s) 6327
MslI CAYNNNNRTG 6 cut(s) 596, 1172, 4421, 5894, 6351, 6428
Msp20I TGGCCA 1 cut(s) 6327
MspA1I CMGCKG 7 cut(s) 59, 2452, 2744, 2822, 4289, 6073, 6605
MspCI CTTAAG 2 cut(s) 2362, 3070
MspI CCGG 5 cut(s) 37, 44, 4839, 6314, 6371
MunI CAATTG 2 cut(s) 1610, 4536
Mva1269I GAATGC 3 cut(s) 1167, 1858, 2974
MvnI CGCG 4 cut(s) 59, 2359, 5460, 5756
NciI CCSGG 4 cut(s) 44, 45, 6371, 6372
NcoI CCATGG 1 cut(s) 5538
NdeI CATATG 4 cut(s) 1680, 2176, 5421, 6441
NheI GCTAGC 1 cut(s) 2461
NmeAIII GCCGAG 1 cut(s) 89
NmuCI GTSAC 4 cut(s) 3382, 3497, 3576, 6316
NsiI ATGCAT 1 cut(s) 3305
NspI RCATGY 5 cut(s) 562, 1052, 3020, 5239, 5771
NspV TTCGAA 3 cut(s) 3641, 4834, 6728
PaeI GCATGC 2 cut(s) 1052, 5771
PagI TCATGA 4 cut(s) 2605, 3628, 4696, 5452
PauI GCGCGC 1 cut(s) 2357
PceI AGGCCT 3 cut(s) 2296, 2416, 2480
PciSI GCTCTTC 3 cut(s) 261, 1845, 4629
PcsI WCGNNNNNNNCGW 1 cut(s) 1808
PctI GAATGC 3 cut(s) 1167, 1858, 2974
PdmI GAANNNNTTC 5 cut(s) 255, 1249, 1563, 2793, 4692
PflFI GACNNNGTC 2 cut(s) 79, 5296
PflMI CCANNNNNTGG 2 cut(s) 1294, 5885
PfoI TCCNGGA 2 cut(s) 1618, 4065
PinAI ACCGGT 2 cut(s) 4838, 6313
PmaCI CACGTG 1 cut(s) 1672
PmlI CACGTG 1 cut(s) 1672
Ppu21I YACGTR 2 cut(s) 1423, 1672
PpuMI RGGWCCY 2 cut(s) 5966, 6374
PshAI GACNNNNGTC 1 cut(s) 6372
PsiI TTATAA 1 cut(s) 4040
Psp1406I AACGTT 1 cut(s) 1734
Psp5II RGGWCCY 2 cut(s) 5966, 6374
PspCI CACGTG 1 cut(s) 1672
PspFI CCCAGC 6 cut(s) 32, 474, 726, 2025, 4604, 5000
PspOMI GGGCCC 2 cut(s) 29, 52
PspPPI RGGWCCY 2 cut(s) 5966, 6374
PsrI GAACNNNNNNTAC 2 cut(s) 1770, 1802
PstI CTGCAG 4 cut(s) 1599, 2869, 5815, 6742
PstNI CAGNNNCTG 4 cut(s) 2873, 5357, 6239, 6788
PsyI GACNNNGTC 2 cut(s) 79, 5296
PteI GCGCGC 1 cut(s) 2357
PvuII CAGCTG 3 cut(s) 2822, 4289, 6605
RseI CAYNNNNRTG 6 cut(s) 596, 1172, 4421, 5894, 6351, 6428
SacII CCGCGG 1 cut(s) 60
SalI GTCGAC 1 cut(s) 4170
SapI GCTCTTC 3 cut(s) 261, 1845, 4629
ScaI AGTACT 2 cut(s) 2940, 4110
SduI GDGCHC 8 cut(s) 33, 56, 867, 1412, 3787, 4384, 6265, 6495
SexAI ACCWGGT 1 cut(s) 4815
SfcI CTRYAG 8 cut(s) 1389, 1595, 1601, 2865, 4180, 4227, 5811, 6738
Sfr303I CCGCGG 1 cut(s) 60
SfuI TTCGAA 3 cut(s) 3641, 4834, 6728
SgrBI CCGCGG 1 cut(s) 60
SinI GGWCC 8 cut(s) 676, 1439, 1885, 2063, 5425, 5966, 6374, 6705
SmaI CCCGGG 2 cut(s) 45, 6372
SmiMI CAYNNNNRTG 6 cut(s) 596, 1172, 4421, 5894, 6351, 6428
SmlI CTYRAG 6 cut(s) 860, 1529, 2362, 3070, 3348, 3692
SmoI CTYRAG 6 cut(s) 860, 1529, 2362, 3070, 3348, 3692
SpeI ACTAGT 1 cut(s) 2723
SphI GCATGC 2 cut(s) 1052, 5771
SseBI AGGCCT 3 cut(s) 2296, 2416, 2480
SspI AATATT 4 cut(s) 2242, 3138, 4915, 5069
StuI AGGCCT 3 cut(s) 2296, 2416, 2480
StyI CCWWGG 6 cut(s) 283, 1217, 4026, 4983, 5538, 6590
TatI WGTACW 7 cut(s) 976, 2938, 3169, 3939, 4108, 4809, 6193
TauI GCSGC 4 cut(s) 1678, 2915, 3226, 4981
TseFI GTSAC 4 cut(s) 3382, 3497, 3576, 6316
Tsp45I GTSAC 4 cut(s) 3382, 3497, 3576, 6316
TspGWI ACGGA 7 cut(s) 659, 1326, 2076, 2587, 3073, 6568, 6793
TspMI CCCGGG 2 cut(s) 43, 6370
Tth111I GACNNNGTC 2 cut(s) 79, 5296
Van91I CCANNNNNTGG 2 cut(s) 1294, 5885
Vha464I CTTAAG 2 cut(s) 2362, 3070
VneI GTGCAC 2 cut(s) 3783, 6261
VpaK11BI GGWCC 8 cut(s) 676, 1439, 1885, 2063, 5425, 5966, 6374, 6705
XagI CCTNNNNNAGG 1 cut(s) 1623
XapI RAATTY 6 cut(s) 2272, 2703, 3586, 3735, 5318, 6658
XceI RCATGY 5 cut(s) 562, 1052, 3020, 5239, 5771
XcmI CCANNNNNNNNNTGG 1 cut(s) 5435
XmaI CCCGGG 2 cut(s) 43, 6370
XmaJI CCTAGG 2 cut(s) 1217, 6590
XmiI GTMKAC 4 cut(s) 119, 1445, 4171, 4179
XmnI GAANNNNTTC 5 cut(s) 255, 1249, 1563, 2793, 4692
ZrmI AGTACT 2 cut(s) 2940, 4110
Zsp2I ATGCAT 1 cut(s) 3305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.