Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0006097

Physical Location & Seq

Genomic Coordinates Forward (+)

10393158 .. 10396562

Gene Structure 3405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g09500.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGCAATCCGGTGGCGGAGGAGGAGGCGGGCCCGGCAGGGGAGTGGGCCCGGCTGGCCGTGCCGGGTCGACGTCGTCGGCTGCTTCGCCGTCTTCATCGTCCTCGGCCGTGTCAACGCCACGCCTGGGTTTTGATTCGGTGCAGCATCAGCAACATCAGCAGCAACAGCAACAGCAGCAGCAGCAGTTTGGGTCTAGACAGCCATTACACCAACAACAATTTTTAAGAAAACCTGAAGGGAATGAAGCACTTCGAGCATATCAAGTTGCTGGTATGCAAGGAGTTTTGGGTGGGGGCAATTTTGTTTCATCTTCCAGCTCCAGTCAAATGCCTCAACAATCTAGGAAGTTCATTGATTTGGCTCAACAACATGGCTCCCAGGATGGACAGAGCCGGAGTCAAGGTGTTGACCAGCAAGCATTAAATCCAGTTCATCAAGTTTATCCTCAGTATGCTTTTCAGGCAGCCCAGCAGAAGTCAGGTTTGACAATGCAACCTCAGCAGCAAGCAAAAATGGGATCATTGGGGCCGCCATCTGGAAAGGATCAGGACATGCGATTGGGAAATATGAAAATGCAGGAACTCATGTCTAATCCGGGATCTAGTCAGGCACAAGCATCATCGTCTAAGAATTTGATGGAACATTTTACTCGTGGAGAAAAGCAGATGGACCAAGGACAGCCACCAGTCTCTGACCGAAGGAGTGACTCGAAGCCTTCAGCCCAGCCATCAGGAATGGGTCAATTCATGCCTGGAAACATGTTAAGGCCAATGCTGGCACCACAGTCTCAGCCAAGTGCCCAAACCATGCCAAATAACCAGATCGCATTAGCTGCTCAGTTGCAAGCATTTGCACTTGAGCACAACATTGATCTTTCACAGCCTGGAAATGCCAACTTAATGTCACAACTCATTCCACTGTTGCAGTCGAGGATTGCTACTCAACAGAAAGCAAATGAAAGCAACATGGGTGCACAATCCTCCCCTGTTCCAGTGTCAAAGCAGCAGGTTACTTCTCCTCCAGTAATGCGTGAGAGTTCTCCTCATGCTAATACATCAAGTGATGTATCTGGGCAATCTACCTCTGCAAAAGCAAAGCAGACAGTTGCGGCTAACCCTTTTGTTTCAGGTTCAAGTAATAGCATCTTTAACAATAGTAGCAGCATTCCTATGCAGCAGTTTTCTGTTCATGGCAGAGAAAACCAGATGCCACCTAAGCAGTCAAATCCTTTTGGAAATGGAATGACTTCTACCCATCCCACACAGTCTGCAAATACAAGCCAGGGTGTGGATCACTCTTCCCATGTAAAAAGTTCACAAAACAATCCAGAAACATTGCAGATGCAAAACCATCGACAGGTGAGTGGATCTTCTTCACAAGCTGTGGTTCCTAATGATGGGGGTTCTGGCAACAAGAACCAGTCACAAGGTGGACTTACTACCCGGATGGGACAGCAACACCATGGGTTCACTAAACAGCAGCTGCATGTTCTTAAAGCGCAAATACTAGCATTTAGGCGACTCAAGAAAGGTGAAGGCACACTCCCTCAAGAACTTCTACGGGCTATTGCTCCACCACCTCTTGAGCTGCAGCTACAGCAGCAATTGCTTCCTGGAGGAGGAAGCATTCAGGATAAATCTTCTGGGAAAGTTTTAGAAGATCATGTGCGGCATATGGAGTCCAATGAGAAAGATTCACAGGCTGTGGCATCAAAGAATGCACAGAACATTACAAAAGAGGAAGCTTTTACCGGAGAAGAAAAAGCAACTCTATCAACCATTCATGTGCAAGGAAAGCCTGCTGTGGTGAAGGAACCTTCTCCCTTGGTGTCTTCTGGAAAAGAAGAGCAACATTCTACTTTATCTTCTGTAAAGTCAGACCATGAAGTTGAACGTGGTATTCAAAAAGCTTCTGTTAGAACTGAGATTCCAGTTGATAGGGGAAAGTCTGTTGCATCACAGGTCGCTGTATCTGATGCCATGCAAGTAAAAAAGCCTCCACAATCAAGCACTGTACCGCAGCCAAAAGATGTTAGCTCTGCTAGAAAGTATCATGGACCTCTGTTTGATTTCCCCTTTTTCACTAGGAAACATGACTCTTTTGGTTTAGGGGTGATGGTAAATAACAACAACAACAATAATAATCTAACATTGGCATATGATGTCAAAGATCGTTCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009653 GO:0009987 GO:0010199 GO:0010468 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0032502 GO:0040029 GO:0043044 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048646 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060147 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070920 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090691 GO:0097159 GO:1900034 GO:1900036 GO:1901363 GO:1903798

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Bromodomain Helicase_C QLQ SNF2_N

Protein Analysis

728

Amino Acids

77.91

Weight (kDa)

9.72

Isoelectric Point (pI)

66.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020
fragaria_vesca	FvH4_7g14720
malus_domestica	MD01G1065800.v1.1 MD07G1134800.v1.1
prunus_persica	Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1
pyrus_communis	pycom01g09500 pycom01g09510 pycom07g13210
rosa_chinensis	RchiOBHm_Chr1g0356661
rosa_laevigata	RLG00000028089
rosa_multiflora	Rmu_sc0013188.1_g000005 Rmu_sc0037764.1_g000001
rosa_roxburghii	Rroxscaffold_4G00299450
rosa_rugosa	Rorug01G0250400
rosa_samantha	Rh1AG264300 Rh1BG231900 Rh1CG247900 Rh1DG259500
rosa_wichuraiana	Rw1G023380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	997
AccB1I	GGYRCC	1 cut(s)	778
AccB7I	CCANNNNNTGG	1 cut(s)	1288
AccI	GTMKAC	1 cut(s)	68
AciI	CCGC	6 cut(s)	15, 27, 530, 1109, 1669, 2018
AclWI	GGATC	5 cut(s)	526, 552, 607, 1299, 1375
AcoI	YGGCCR	2 cut(s)	55, 105
AcsI	RAATTY	1 cut(s)	631
AcuI	CTGAAG	2 cut(s)	255, 702
AcyI	GRCGYC	1 cut(s)	71
AdeI	CACNNNGTG	1 cut(s)	1430
AfaI	GTAC	1 cut(s)	2016
AfiI	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
AflIII	ACRYGT	1 cut(s)	759
AgsI	TTSAA	3 cut(s)	1134, 1892, 1904
AjnI	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
AloI	GAACNNNNNNTCC	2 cut(s)	1912, 1944
AluBI	AGCT	9 cut(s)	318, 833, 1382, 1483, 1588, 1594, 1745, 1910, 2037
AluI	AGCT	9 cut(s)	318, 833, 1382, 1483, 1588, 1594, 1745, 1910, 2037
Alw21I	GWGCWC	2 cut(s)	864, 976
Alw26I	GTCTC	2 cut(s)	694, 792
Alw44I	GTGCAC	1 cut(s)	972
AlwI	GGATC	5 cut(s)	526, 552, 607, 1299, 1375
AlwNI	CAGNNNCTG	2 cut(s)	692, 1483
AoxI	GGCC	6 cut(s)	29, 46, 55, 105, 527, 767
ApaI	GGGCCC	2 cut(s)	33, 50
ApaLI	GTGCAC	1 cut(s)	972
ApoI	RAATTY	1 cut(s)	631
Asp700I	GAANNNNTTC	2 cut(s)	249, 1246
AspLEI	GCGC	1 cut(s)	1501
AspS9I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
AsuC2I	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
AsuHPI	GGTGA	4 cut(s)	1372, 1544, 1819, 2125
AvaII	GGWCC	2 cut(s)	670, 2057
BaeGI	GKGCMC	4 cut(s)	33, 50, 802, 976
BanI	GGYRCC	1 cut(s)	778
BanII	GRGCYC	2 cut(s)	33, 50
BauI	CACGAG	1 cut(s)	651
BbsI	GAAGAC	2 cut(s)	84, 1824
Bbv12I	GWGCWC	2 cut(s)	864, 976
BbvCI	CCTCAGC	1 cut(s)	498
BceAI	ACGGC	3 cut(s)	42, 73, 92
BcgI	CGANNNNNNTGC	2 cut(s)	1334, 1368
BciT130I	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
BcnI	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
BcoDI	GTCTC	2 cut(s)	694, 792
BfaI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
BfmI	CTRYAG	2 cut(s)	1589, 1595
BfuAI	ACCTGC	1 cut(s)	997
BglI	GCCNNNNNGGC	1 cut(s)	54
Bme18I	GGWCC	2 cut(s)	670, 2057
BmgT120I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
BmiI	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
BmsI	GCATC	8 cut(s)	154, 626, 1152, 1197, 1332, 1718, 1964, 1966
BpiI	GAAGAC	2 cut(s)	84, 1824
BplI	GAGNNNNNCTC	2 cut(s)	1027, 1059
BpmI	CTGGAG	3 cut(s)	304, 1005, 1635
Bpu10I	CCTNAGC	2 cut(s)	498, 1215
BpuEI	CTTGAG	4 cut(s)	878, 1508, 1533, 1604
BpuMI	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
BsaHI	GRCGYC	1 cut(s)	71
BsaJI	CCNNGG	7 cut(s)	102, 124, 378, 673, 1282, 1462, 1824
BsaWI	WCCGGW	2 cut(s)	8, 1751
BsaXI	ACNNNNNCTCC	4 cut(s)	388, 418, 1003, 1033
Bsc4I	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
Bse1I	ACTGG	7 cut(s)	321, 428, 686, 992, 1022, 1420, 1931
Bse3DI	GCAATG	1 cut(s)	1334
BseBI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
BseDI	CCNNGG	7 cut(s)	102, 124, 378, 673, 1282, 1462, 1824
BseGI	GGATG	3 cut(s)	388, 1255, 1452
BseLI	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
BseMI	GCAATG	1 cut(s)	1334
BseMII	CTCAG	5 cut(s)	461, 512, 803, 851, 1914
BseNI	ACTGG	7 cut(s)	321, 428, 686, 992, 1022, 1420, 1931
BseRI	GAGGAG	5 cut(s)	33, 36, 1008, 1032, 1632
BseSI	GKGCMC	4 cut(s)	33, 50, 802, 976
BseX3I	CGGCCG	1 cut(s)	105
BseYI	CCCAGC	2 cut(s)	468, 723
BsgI	GTGCAG	1 cut(s)	161
Bsh1285I	CGRYCG	1 cut(s)	108
BshFI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
BshNI	GGYRCC	1 cut(s)	778
BsiEI	CGRYCG	1 cut(s)	108
BsiHKAI	GWGCWC	2 cut(s)	864, 976
BsiSI	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
BslFI	GGGAC	1 cut(s)	1464
BslI	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
BsmAI	GTCTC	2 cut(s)	694, 792
BsmFI	GGGAC	1 cut(s)	1464
BsmI	GAATGC	3 cut(s)	1164, 1626, 1723
BsnI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
Bsp120I	GGGCCC	2 cut(s)	29, 46
Bsp1286I	GDGCHC	5 cut(s)	33, 50, 802, 864, 976
Bsp143I	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
Bsp19I	CCATGG	1 cut(s)	1462
BspACI	CCGC	6 cut(s)	15, 27, 530, 1109, 1669, 2018
BspANI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
BspCNI	CTCAG	5 cut(s)	460, 511, 802, 850, 1915
BspLI	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
BspMAI	CTGCAG	1 cut(s)	1593
BspMI	ACCTGC	1 cut(s)	997
BspPI	GGATC	5 cut(s)	526, 552, 607, 1299, 1375
BspQI	GCTCTTC	1 cut(s)	1839
BspT107I	GGYRCC	1 cut(s)	778
BsrDI	GCAATG	1 cut(s)	1334
BsrI	ACTGG	7 cut(s)	321, 428, 686, 992, 1022, 1420, 1931
BssECI	CCNNGG	7 cut(s)	102, 124, 378, 673, 1282, 1462, 1824
BssMI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
BssNI	GRCGYC	1 cut(s)	71
BssSI	CACGAG	1 cut(s)	651
BssT1I	CCWWGG	3 cut(s)	673, 1462, 1824
Bst2BI	CACGAG	1 cut(s)	651
Bst2UI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
Bst4CI	ACNGT	5 cut(s)	786, 921, 1105, 1266, 2014
Bst6I	CTCTTC	2 cut(s)	1303, 1839
BstACI	GRCGYC	1 cut(s)	71
BstAPI	GCANNNNNTGC	2 cut(s)	833, 1606
BstC8I	GCNNGC	7 cut(s)	29, 55, 417, 507, 777, 846, 1800
BstDEI	CTNAG	7 cut(s)	447, 498, 627, 789, 837, 1215, 1923
BstDSI	CCRYGG	1 cut(s)	1462
BstENI	CCTNNNNNAGG	1 cut(s)	1617
BstF5I	GGATG	3 cut(s)	388, 1255, 1452
BstHHI	GCGC	1 cut(s)	1501
BstKTI	GATC	9 cut(s)	521, 547, 602, 825, 874, 1294, 1370, 1663, 2173
BstMAI	GTCTC	2 cut(s)	694, 792
BstMBI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
BstMCI	CGRYCG	1 cut(s)	108
BstNI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
BstNSI	RCATGY	3 cut(s)	556, 763, 1490
BstSFI	CTRYAG	2 cut(s)	1589, 1595
BstSLI	GKGCMC	4 cut(s)	33, 50, 802, 976
BstV2I	GAAGAC	2 cut(s)	84, 1824
BstX2I	RGATCY	2 cut(s)	599, 1367
BstYI	RGATCY	2 cut(s)	599, 1367
BstZI	CGGCCG	1 cut(s)	105
BsuRI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
BtgI	CCRYGG	1 cut(s)	1462
BtsCI	GGATG	3 cut(s)	388, 1255, 1452
BtsIMutI	CAGTG	3 cut(s)	917, 999, 2010
BveI	ACCTGC	1 cut(s)	997
Cac8I	GCNNGC	7 cut(s)	29, 55, 417, 507, 777, 846, 1800
CaiI	CAGNNNCTG	2 cut(s)	692, 1483
CfoI	GCGC	1 cut(s)	1501
Cfr13I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
Csp6I	GTAC	1 cut(s)	2015
CviQI	GTAC	1 cut(s)	2015
DdeI	CTNAG	7 cut(s)	447, 498, 627, 789, 837, 1215, 1923
DpnI	GATC	9 cut(s)	520, 546, 601, 824, 873, 1293, 1369, 1662, 2172
DpnII	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
DraIII	CACNNNGTG	1 cut(s)	1430
EaeI	YGGCCR	2 cut(s)	55, 105
EagI	CGGCCG	1 cut(s)	105
Eam1104I	CTCTTC	2 cut(s)	1303, 1839
EarI	CTCTTC	2 cut(s)	1303, 1839
EciI	GGCGGA	1 cut(s)	30
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	3 cut(s)	673, 1462, 1824
Eco24I	GRGCYC	2 cut(s)	33, 50
Eco47I	GGWCC	2 cut(s)	670, 2057
Eco52I	CGGCCG	1 cut(s)	105
Eco57I	CTGAAG	2 cut(s)	255, 702
EcoNI	CCTNNNNNAGG	1 cut(s)	1617
EcoRII	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
EcoT14I	CCWWGG	3 cut(s)	673, 1462, 1824
EcoT38I	GRGCYC	2 cut(s)	33, 50
ErhI	CCWWGG	3 cut(s)	673, 1462, 1824
FalI	AAGNNNNNCTT	2 cut(s)	1419, 1451
FaqI	GGGAC	1 cut(s)	1464
FauI	CCCGC	1 cut(s)	20
FauNDI	CATATG	2 cut(s)	1674, 2158
FblI	GTMKAC	1 cut(s)	68
FokI	GGATG	3 cut(s)	395, 1242, 1459
FriOI	GRGCYC	2 cut(s)	33, 50
FspBI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
GlaI	GCGC	1 cut(s)	1500
GsaI	CCCAGC	2 cut(s)	472, 727
GsuI	CTGGAG	3 cut(s)	304, 1005, 1635
HaeIII	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
HapII	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
HhaI	GCGC	1 cut(s)	1501
Hin1I	GRCGYC	1 cut(s)	71
Hin6I	GCGC	1 cut(s)	1499
HinP1I	GCGC	1 cut(s)	1499
HincII	GTYRAC	3 cut(s)	69, 114, 409
HindII	GTYRAC	3 cut(s)	69, 114, 409
HindIII	AAGCTT	2 cut(s)	1743, 1908
HinfI	GANTC	8 cut(s)	134, 397, 707, 1521, 1679, 1694, 1927, 2096
HpaII	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
HphI	GGTGA	4 cut(s)	1372, 1544, 1819, 2125
Hpy166II	GTNNAC	7 cut(s)	69, 114, 409, 974, 1316, 1433, 1470
Hpy188I	TCNGA	3 cut(s)	694, 1879, 1975
Hpy8I	GTNNAC	7 cut(s)	69, 114, 409, 974, 1316, 1433, 1470
Hpy99I	CGWCG	3 cut(s)	73, 76, 79
HpyAV	CCTTC	6 cut(s)	230, 693, 726, 1529, 1804, 1827
HpyCH4III	ACNGT	5 cut(s)	786, 921, 1105, 1266, 2014
HpyCH4IV	ACGT	2 cut(s)	71, 1894
HpyF3I	CTNAG	7 cut(s)	447, 498, 627, 789, 837, 1215, 1923
HpySE526I	ACGT	2 cut(s)	71, 1894
Hsp92I	GRCGYC	1 cut(s)	71
HspAI	GCGC	1 cut(s)	1499
Kzo9I	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
LguI	GCTCTTC	1 cut(s)	1839
LmnI	GCTCC	3 cut(s)	323, 380, 1576
LweI	GCATC	8 cut(s)	154, 626, 1152, 1197, 1332, 1718, 1964, 1966
MaeI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
MaeII	ACGT	2 cut(s)	71, 1894
MaeIII	GTNAC	4 cut(s)	704, 903, 1009, 1422
MalI	GATC	9 cut(s)	520, 546, 601, 824, 873, 1293, 1369, 1662, 2172
MboI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
MfeI	CAATTG	1 cut(s)	1604
MflI	RGATCY	2 cut(s)	599, 1367
MhlI	GDGCHC	5 cut(s)	33, 50, 802, 864, 976
MluCI	AATT	5 cut(s)	218, 298, 631, 743, 1604
MlyI	GAGTC	5 cut(s)	406, 701, 1515, 1688, 2090
MroXI	GAANNNNTTC	2 cut(s)	249, 1246
MseI	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
MslI	CAYNNNNRTG	2 cut(s)	1169, 1784
MspA1I	CMGCKG	1 cut(s)	1483
MspI	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
MunI	CAATTG	1 cut(s)	1604
Mva1269I	GAATGC	3 cut(s)	1164, 1626, 1723
MvaI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
NciI	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
NcoI	CCATGG	1 cut(s)	1462
NdeI	CATATG	2 cut(s)	1674, 2158
NdeII	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
NlaIV	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
NmeAIII	GCCGAG	1 cut(s)	83
NmuCI	GTSAC	3 cut(s)	704, 903, 1422
NspI	RCATGY	3 cut(s)	556, 763, 1490
PciI	ACATGT	1 cut(s)	759
PciSI	GCTCTTC	1 cut(s)	1839
PctI	GAATGC	3 cut(s)	1164, 1626, 1723
PdmI	GAANNNNTTC	2 cut(s)	249, 1246
PfeI	GAWTC	3 cut(s)	134, 1694, 1927
PflFI	GACNNNGTC	1 cut(s)	73
PflMI	CCANNNNNTGG	1 cut(s)	1288
PfoI	TCCNGGA	2 cut(s)	595, 1612
PleI	GAGTC	5 cut(s)	405, 701, 1515, 1687, 2090
PpsI	GAGTC	5 cut(s)	405, 701, 1515, 1687, 2090
PscI	ACATGT	1 cut(s)	759
Psp6I	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
PspFI	CCCAGC	2 cut(s)	468, 723
PspGI	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
PspN4I	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
PspOMI	GGGCCC	2 cut(s)	29, 46
PspPI	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
PstI	CTGCAG	1 cut(s)	1593
PstNI	CAGNNNCTG	2 cut(s)	692, 1483
PsuI	RGATCY	2 cut(s)	599, 1367
PsyI	GACNNNGTC	1 cut(s)	73
PvuII	CAGCTG	1 cut(s)	1483
RsaI	GTAC	1 cut(s)	2016
RsaNI	GTAC	1 cut(s)	2015
RseI	CAYNNNNRTG	2 cut(s)	1169, 1784
SalI	GTCGAC	1 cut(s)	67
SapI	GCTCTTC	1 cut(s)	1839
SaqAI	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
Sau3AI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
Sau96I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
SchI	GAGTC	5 cut(s)	406, 701, 1515, 1688, 2090
SduI	GDGCHC	5 cut(s)	33, 50, 802, 864, 976
SfaNI	GCATC	8 cut(s)	154, 626, 1152, 1197, 1332, 1718, 1964, 1966
SfcI	CTRYAG	2 cut(s)	1589, 1595
SfiI	GGCCNNNNNGGCC	1 cut(s)	54
SinI	GGWCC	2 cut(s)	670, 2057
SmiMI	CAYNNNNRTG	2 cut(s)	1169, 1784
SmlI	CTYRAG	4 cut(s)	857, 1523, 1548, 1583
SmoI	CTYRAG	4 cut(s)	857, 1523, 1548, 1583
Sse9I	AATT	5 cut(s)	218, 298, 631, 743, 1604
SsiI	CCGC	6 cut(s)	15, 27, 530, 1109, 1669, 2018
SspMI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
StyI	CCWWGG	3 cut(s)	673, 1462, 1824
TaaI	ACNGT	5 cut(s)	786, 921, 1105, 1266, 2014
TaiI	ACGT	2 cut(s)	74, 1897
TaqI	TCGA	5 cut(s)	68, 253, 710, 929, 1354
TaqII	GACCGA	1 cut(s)	711
TasI	AATT	5 cut(s)	218, 298, 631, 743, 1604
TauI	GCSGC	3 cut(s)	532, 1112, 1672
TfiI	GAWTC	3 cut(s)	134, 1694, 1927
Tru1I	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
Tru9I	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
TscAI	CASTG	3 cut(s)	924, 999, 2017
TseFI	GTSAC	3 cut(s)	704, 903, 1422
Tsp45I	GTSAC	3 cut(s)	704, 903, 1422
TspRI	CASTG	3 cut(s)	924, 999, 2017
Tth111I	GACNNNGTC	1 cut(s)	73
Van91I	CCANNNNNTGG	1 cut(s)	1288
VneI	GTGCAC	1 cut(s)	972
VpaK11BI	GGWCC	2 cut(s)	670, 2057
XagI	CCTNNNNNAGG	1 cut(s)	1617
XapI	RAATTY	1 cut(s)	631
XbaI	TCTAGA	1 cut(s)	194
XceI	RCATGY	3 cut(s)	556, 763, 1490
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1427
XmiI	GTMKAC	1 cut(s)	68
XmnI	GAANNNNTTC	2 cut(s)	249, 1246
XspI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
ZraI	GACGTC	1 cut(s)	72

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.