Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0006097

Physical Location & Seq

Genomic Coordinates Reverse (-)

35866267 .. 35873612

Gene Structure 7346 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0250400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGCGTCGGAGCCTCCTCCCACCACCACGACTACGTCATCCACCGCGACCGCCGCCGTAAAAGAGAAACGGCACCGTTCCATCTTCGAACTCCCGGCCAACTTCTTCGACTCCTGCGCCCTCCTCACTTCTTCTGGCCTCTCAGTTGCTTCAACTTTCGAGACCTCTAACAACAACAACAACAACAACTCCGCTCTCGAAACCCTAGACGAGTCTGTGTCCGATAGCACCGATCAAGATCGCTCTTTAAACGCCTCCGTATCGACTCGGTGGACCTGCAACACTTGCAAGGCTGAGTTCGAGTCCCTCCAAGAGCAGCGATTTCACTTCAAATCCGATATTCACCGATTCAATGTGAAGCTAAGTCTTGCCGGAAAGAATATTGTGAAGGAGGAGGACTTTGATGAGTTAACGTCTGATTCTTTTAAAGACTTTGATGTCTCGAGTATATCGGGATCAGAGGATGATGAACCTGAAAAAGTTGGCCCTTTCAAGCTTTCAAGGGCAACTGCTAGGCAGAAATTACTCATCCACCTTCAGACAGGAGAAAGAATTTCGATTTGGAAGGGTTTGGTTACAAATGAATCTGGACCTGAAAGTAATTTGTCATGTGATGAATTGTTAGGGAGATTGAACATGGTGGTTCATGAGCCTAGAGATAATACCTGTTTTAGAGTTGTGTTGCTTGCAAGCGGTGGGCACTTTGCTGGTTGTGTGTTTGATGGTAGCAAGATTGTAGCTCACAAGACCTTCCACAGGTATGTCGTAAGGGCCAAGTCTGGAAAAAAACAGTCATCCAATGATGCATCTGGAAGGTTTGCTCATTCCGCTGGAGCTTCTCTTCGTCGCCATAATGAACTTGGATTGAAAAAGGATATTCAAGAGCTACTTGCTGCATGGAAGCCTTATTTTGATGCTTCGTCTTGCGTTTTTGTTTATGCTCCTTCTAGTAATCATCAGCTGCTATCTAATAGGGAGACACCATATTTTAGTCATCAGAAAGTCCGAAATATTCCAATCCCTATTCGGAGACCTACTATGAAGGAAGCTCGGCGGATATATGACCAGTTGACACAAGTCTCTTATGAACAAGAGGAGAATGAAGTTCCTTTAGTTACCAAAAAGGAATTGCCGTCTAGTTCAGGAATTGAAAATGATATCATCTCAAGCATGGCGAAAGTCAACATTGTTGAGCCTTTTGTTGAGCCTAGTACAGAAGCTTGCTCAAGTACTAGAGAGTCCAATGAACTCCCTATATCAAGTGAGAGTAGTAATGAGGTTAAAGGTTCGTCAACACCTTTGCATGAGGCAGCACAGTCTGGGAATGCTCTCAAGGTTTTGGAACTCTTGGAACAGGGTCTGGATCCTTGTGCCAGAGATGAAAGGGGACAGACTCCATACACGGTAGCAAACGAAAAGGAGGTCAGAAACACATTTAGACGGTTCATGGCCTCAAATCTAGATAAGTGGGACTGGAATGCTGCTAAGGTACCTAGTGCATTGACAAAGGAGATGGAGGAATCTCAAGCTGCTAAGCAGGCTGAAAAAGAAGCGAAAAGGAAAGCTAAAGCCAAAGAATTGAAGAAACTACGCAAAGAAAAAGAAAAGAAAGCTCAGGCTGAGGCTGCTGCTTCCAAGAATACTTTGACCATTACAAAGTCCTCTTCATCATCTCAGCCCAGTCGTGCATCACAGATCTCTAAAGAGGAGGAACTGAAAAGGGCACTGGTAGCCGAGAGGGAAAAACGAGCAGCCGCAGCCGAGCGGAGAATGGCTGCAGCTGCAGCCCTTAGTGCTCAAGGTAATAGCACCACTGCACAACCCAAAACTGGGGAAGCTGGTGAAGGTGCCGATGGTGGTTGTGGCTATGGTCCAAGTGATGCTAATGGCGGTGGTGGTGGTGGTGGTGGTCGTGTTAGTGGCAAATTAGTGATGATAATTGTGGTGGTCACAACGATGGCTCTCAAGTGGTGGCAGTGGCGACGCAGACGACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009653 GO:0009987 GO:0010199 GO:0010468 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0032502 GO:0040029 GO:0043044 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048646 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060147 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070920 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090691 GO:0097159 GO:1900034 GO:1900036 GO:1901363 GO:1903798

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Bromodomain Helicase_C QLQ SNF2_N

Protein Analysis

665

Amino Acids

73.02

Weight (kDa)

8.59

Isoelectric Point (pI)

50.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bVLRF1	PF18826	226 - 364	5.9e-46	Bacteroidetes VLRF1 release factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020
fragaria_vesca	FvH4_7g14720
malus_domestica	MD01G1065800.v1.1 MD07G1134800.v1.1
prunus_persica	Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1
pyrus_communis	pycom01g09500 pycom01g09510 pycom07g13210
rosa_chinensis	RchiOBHm_Chr1g0356661
rosa_laevigata	RLG00000028089
rosa_multiflora	Rmu_sc0013188.1_g000005 Rmu_sc0037764.1_g000001
rosa_roxburghii	Rroxscaffold_4G00299450
rosa_rugosa	Rorug01G0250400
rosa_samantha	Rh1AG264300 Rh1BG231900 Rh1CG247900 Rh1DG259500
rosa_wichuraiana	Rw1G023380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	437
Acc36I	ACCTGC	1 cut(s)	284
Acc65I	GGTACC	1 cut(s)	1489
AccB1I	GGYRCC	3 cut(s)	72, 1489, 1847
AccBSI	CCGCTC	2 cut(s)	194, 1765
AccII	CGCG	1 cut(s)	47
AclWI	GGATC	3 cut(s)	463, 1358, 1371
AcoI	YGGCCR	1 cut(s)	96
AcsI	RAATTY	1 cut(s)	552
AcuI	CTGAAG	1 cut(s)	521
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	1213, 1231, 1491
AfiI	CCNNNNNNNGG	3 cut(s)	756, 1829, 1830
AjuI	GAANNNNNNNTTGG	2 cut(s)	544, 576
Alw21I	GWGCWC	1 cut(s)	1798
Alw26I	GTCTC	5 cut(s)	155, 445, 971, 1024, 1084
AlwI	GGATC	3 cut(s)	463, 1358, 1371
AlwNI	CAGNNNCTG	1 cut(s)	1360
Ama87I	CYCGRG	1 cut(s)	442
AoxI	GGCC	5 cut(s)	96, 136, 484, 771, 1449
ApoI	RAATTY	1 cut(s)	552
ArsI	GACNNNNNNTTYG	2 cut(s)	1407, 1439
Asp718I	GGTACC	1 cut(s)	1489
AspLEI	GCGC	1 cut(s)	119
AspS9I	GGNCC	5 cut(s)	273, 485, 590, 771, 1871
AsuC2I	CCSGG	1 cut(s)	95
AsuHPI	GGTGA	2 cut(s)	335, 1853
AsuII	TTCGAA	1 cut(s)	87
AvaI	CYCGRG	1 cut(s)	442
AvaII	GGWCC	3 cut(s)	273, 590, 1871
BaeGI	GKGCMC	2 cut(s)	702, 1726
BamHI	GGATCC	1 cut(s)	1363
BanI	GGYRCC	3 cut(s)	72, 1489, 1847
Bbv12I	GWGCWC	1 cut(s)	1798
BbvCI	CCTCAGC	1 cut(s)	1620
BccI	CCATC	5 cut(s)	89, 716, 1507, 1847, 1951
BceAI	ACGGC	3 cut(s)	41, 86, 1117
BcnI	CCSGG	1 cut(s)	95
BcoDI	GTCTC	5 cut(s)	155, 445, 971, 1024, 1084
BfaI	CTAG	9 cut(s)	206, 513, 654, 948, 1137, 1209, 1233, 1460, 1494
BfmI	CTRYAG	2 cut(s)	1776, 1782
BfuAI	ACCTGC	1 cut(s)	284
BglII	AGATCT	1 cut(s)	1695
BlpI	GCTNAGC	1 cut(s)	1533
BmcAI	AGTACT	1 cut(s)	1231
Bme1390I	CCNGG	1 cut(s)	95
Bme18I	GGWCC	3 cut(s)	273, 590, 1871
BmeT110I	CYCGRG	1 cut(s)	442
BmgT120I	GGNCC	5 cut(s)	273, 485, 590, 771, 1871
BmiI	GGNNCC	5 cut(s)	12, 74, 1365, 1491, 1849
BmrFI	CCNGG	1 cut(s)	95
BmrI	ACTGGG	2 cut(s)	1674, 1839
BmsI	GCATC	5 cut(s)	793, 815, 904, 1697, 1870
BmuI	ACTGGG	2 cut(s)	1674, 1839
BoxI	GACNNNNGTC	1 cut(s)	1076
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	3 cut(s)	1485, 1614, 1620
Bpu1102I	GCTNAGC	1 cut(s)	1533
Bpu14I	TTCGAA	1 cut(s)	87
BpuEI	CTTGAG	6 cut(s)	1150, 1210, 1316, 1509, 1782, 1949
BpuMI	CCSGG	1 cut(s)	95
BsaBI	GATNNNNATC	1 cut(s)	237
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	155, 1024
BsaXI	ACNNNNNCTCC	2 cut(s)	173, 203
Bsc4I	CCNNNNNNNGG	3 cut(s)	756, 1829, 1830
Bse1I	ACTGG	5 cut(s)	1066, 1478, 1680, 1731, 1834
Bse8I	GATNNNNATC	1 cut(s)	237
BseGI	GGATG	4 cut(s)	38, 469, 528, 794
BseJI	GATNNNNATC	1 cut(s)	237
BseLI	CCNNNNNNNGG	3 cut(s)	756, 1829, 1830
BseMII	CTCAG	5 cut(s)	156, 285, 1611, 1628, 1688
BseNI	ACTGG	5 cut(s)	1066, 1478, 1680, 1731, 1834
BseRI	GAGGAG	5 cut(s)	6, 113, 407, 1109, 1721
BseSI	GKGCMC	2 cut(s)	702, 1726
BsgI	GTGCAG	1 cut(s)	1800
Bsh1236I	CGCG	1 cut(s)	47
Bsh1285I	CGRYCG	1 cut(s)	51
BshFI	GGCC	5 cut(s)	98, 138, 486, 773, 1451
BshNI	GGYRCC	3 cut(s)	72, 1489, 1847
BsiEI	CGRYCG	1 cut(s)	51
BsiHKAI	GWGCWC	1 cut(s)	1798
BsiHKCI	CYCGRG	1 cut(s)	442
BsiSI	CCGG	2 cut(s)	95, 372
BslFI	GGGAC	3 cut(s)	289, 1401, 1484
BslI	CCNNNNNNNGG	3 cut(s)	756, 1829, 1830
BsmAI	GTCTC	5 cut(s)	155, 445, 971, 1024, 1084
BsmFI	GGGAC	3 cut(s)	289, 1401, 1484
BsmI	GAATGC	2 cut(s)	1330, 1483
BsnI	GGCC	5 cut(s)	98, 138, 486, 773, 1451
Bso31I	GGTCTC	2 cut(s)	155, 1024
BsoBI	CYCGRG	1 cut(s)	442
Bsp119I	TTCGAA	1 cut(s)	87
Bsp1286I	GDGCHC	3 cut(s)	702, 1726, 1798
Bsp143I	GATC	5 cut(s)	232, 238, 455, 1363, 1695
Bsp1720I	GCTNAGC	1 cut(s)	1533
BspANI	GGCC	5 cut(s)	98, 138, 486, 773, 1451
BspCNI	CTCAG	5 cut(s)	155, 286, 1612, 1627, 1687
BspFNI	CGCG	1 cut(s)	47
BspHI	TCATGA	1 cut(s)	646
BspLI	GGNNCC	5 cut(s)	12, 74, 1365, 1491, 1849
BspMAI	CTGCAG	2 cut(s)	1780, 1786
BspMI	ACCTGC	1 cut(s)	284
BspPI	GGATC	3 cut(s)	463, 1358, 1371
BspT104I	TTCGAA	1 cut(s)	87
BspT107I	GGYRCC	3 cut(s)	72, 1489, 1847
BspTNI	GGTCTC	2 cut(s)	155, 1024
BsrBI	CCGCTC	2 cut(s)	194, 1765
BsrI	ACTGG	5 cut(s)	1066, 1478, 1680, 1731, 1834
BssMI	GATC	5 cut(s)	232, 238, 455, 1363, 1695
BssNI	GRCGYC	1 cut(s)	5
Bst4CI	ACNGT	5 cut(s)	77, 792, 1317, 1405, 1443
Bst6I	CTCTTC	2 cut(s)	846, 1669
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	285
BstBI	TTCGAA	1 cut(s)	87
BstC8I	GCNNGC	4 cut(s)	687, 691, 1222, 1539
BstDEI	CTNAG	9 cut(s)	142, 294, 362, 1485, 1533, 1614, 1620, 1674, 1790
BstENI	CCTNNNNNAGG	1 cut(s)	754
BstF5I	GGATG	4 cut(s)	38, 469, 528, 794
BstFNI	CGCG	1 cut(s)	47
BstHHI	GCGC	1 cut(s)	119
BstKTI	GATC	5 cut(s)	235, 241, 458, 1366, 1698
BstMAI	GTCTC	5 cut(s)	155, 445, 971, 1024, 1084
BstMBI	GATC	5 cut(s)	232, 238, 455, 1363, 1695
BstMCI	CGRYCG	1 cut(s)	51
BstPAI	GACNNNNGTC	1 cut(s)	1076
BstSCI	CCNGG	1 cut(s)	93
BstSFI	CTRYAG	2 cut(s)	1776, 1782
BstSLI	GKGCMC	2 cut(s)	702, 1726
BstUI	CGCG	1 cut(s)	47
BstX2I	RGATCY	2 cut(s)	1363, 1695
BstYI	RGATCY	2 cut(s)	1363, 1695
BsuRI	GGCC	5 cut(s)	98, 138, 486, 773, 1451
BtsCI	GGATG	4 cut(s)	38, 469, 528, 794
BtsI	GCAGTG	2 cut(s)	1812, 1982
BtsIMutI	CAGTG	3 cut(s)	1724, 1812, 1982
BveI	ACCTGC	1 cut(s)	284
Cac8I	GCNNGC	4 cut(s)	687, 691, 1222, 1539
CaiI	CAGNNNCTG	1 cut(s)	1360
CciI	TCATGA	1 cut(s)	646
CfoI	GCGC	1 cut(s)	119
Cfr13I	GGNCC	5 cut(s)	273, 485, 590, 771, 1871
CseI	GACGC	1 cut(s)	1992
Csp6I	GTAC	3 cut(s)	1212, 1230, 1490
CviAII	CATG	7 cut(s)	609, 637, 647, 897, 1171, 1304, 1447
CviQI	GTAC	3 cut(s)	1212, 1230, 1490
DdeI	CTNAG	9 cut(s)	142, 294, 362, 1485, 1533, 1614, 1620, 1674, 1790
DpnI	GATC	5 cut(s)	234, 240, 457, 1365, 1697
DpnII	GATC	5 cut(s)	232, 238, 455, 1363, 1695
DraI	TTTAAA	2 cut(s)	249, 427
DrdI	GACNNNNNNGTC	1 cut(s)	437
DseDI	GACNNNNNNGTC	1 cut(s)	437
EaeI	YGGCCR	1 cut(s)	96
Eam1104I	CTCTTC	2 cut(s)	846, 1669
EarI	CTCTTC	2 cut(s)	846, 1669
EciI	GGCGGA	1 cut(s)	1069
Eco31I	GGTCTC	2 cut(s)	155, 1024
Eco32I	GATATC	1 cut(s)	1159
Eco47I	GGWCC	3 cut(s)	273, 590, 1871
Eco57I	CTGAAG	1 cut(s)	521
Eco88I	CYCGRG	1 cut(s)	442
EcoNI	CCTNNNNNAGG	1 cut(s)	754
EcoRV	GATATC	1 cut(s)	1159
EcoT22I	ATGCAT	1 cut(s)	808
FaeI	CATG	7 cut(s)	612, 640, 650, 900, 1174, 1307, 1450
FalI	AAGNNNNNCTT	2 cut(s)	873, 905
FaqI	GGGAC	3 cut(s)	289, 1401, 1484
FatI	CATG	7 cut(s)	608, 636, 646, 896, 1170, 1303, 1446
FokI	GGATG	4 cut(s)	25, 476, 515, 781
FspBI	CTAG	9 cut(s)	206, 513, 654, 948, 1137, 1209, 1233, 1460, 1494
GlaI	GCGC	1 cut(s)	118
GsuI	CTGGAG	1 cut(s)	852
HaeIII	GGCC	5 cut(s)	98, 138, 486, 773, 1451
HapII	CCGG	2 cut(s)	95, 372
HgaI	GACGC	1 cut(s)	1992
HhaI	GCGC	1 cut(s)	119
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	7 cut(s)	612, 640, 650, 900, 1174, 1307, 1450
Hin6I	GCGC	1 cut(s)	117
HinP1I	GCGC	1 cut(s)	117
HincII	GTYRAC	4 cut(s)	411, 1071, 1183, 1293
HindII	GTYRAC	4 cut(s)	411, 1071, 1183, 1293
HindIII	AAGCTT	2 cut(s)	494, 1218
HpaI	GTTAAC	1 cut(s)	411
HpaII	CCGG	2 cut(s)	95, 372
HphI	GGTGA	2 cut(s)	335, 1853
Hpy166II	GTNNAC	5 cut(s)	273, 411, 1071, 1183, 1293
Hpy8I	GTNNAC	5 cut(s)	273, 411, 1071, 1183, 1293
Hpy99I	CGWCG	3 cut(s)	10, 849, 1986
HpyAV	CCTTC	8 cut(s)	382, 545, 559, 760, 807, 954, 1036, 1838
HpyCH4III	ACNGT	5 cut(s)	77, 792, 1317, 1405, 1443
HpyCH4IV	ACGT	2 cut(s)	35, 413
HpyF3I	CTNAG	9 cut(s)	142, 294, 362, 1485, 1533, 1614, 1620, 1674, 1790
HpySE526I	ACGT	2 cut(s)	35, 413
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	7 cut(s)	612, 640, 650, 900, 1174, 1307, 1450
HspAI	GCGC	1 cut(s)	117
KpnI	GGTACC	1 cut(s)	1493
KspAI	GTTAAC	1 cut(s)	411
Kzo9I	GATC	5 cut(s)	232, 238, 455, 1363, 1695
LmnI	GCTCC	3 cut(s)	10, 833, 946
LweI	GCATC	5 cut(s)	793, 815, 904, 1697, 1870
MaeI	CTAG	9 cut(s)	206, 513, 654, 948, 1137, 1209, 1233, 1460, 1494
MaeII	ACGT	2 cut(s)	35, 413
MaeIII	GTNAC	3 cut(s)	574, 1114, 1948
MalI	GATC	5 cut(s)	234, 240, 457, 1365, 1697
MbiI	CCGCTC	2 cut(s)	194, 1765
MboI	GATC	5 cut(s)	232, 238, 455, 1363, 1695
MboII	GAAGA	6 cut(s)	76, 97, 123, 833, 1594, 1656
MflI	RGATCY	2 cut(s)	1363, 1695
MhlI	GDGCHC	3 cut(s)	702, 1726, 1798
MluCI	AATT	9 cut(s)	521, 552, 601, 617, 1127, 1146, 1577, 1925, 1938
MlyI	GAGTC	6 cut(s)	104, 221, 259, 311, 1247, 1387
Mph1103I	ATGCAT	1 cut(s)	808
MseI	TTAA	4 cut(s)	248, 410, 426, 1281
MslI	CAYNNNNRTG	2 cut(s)	759, 1955
MspA1I	CMGCKG	3 cut(s)	830, 961, 1781
MspI	CCGG	2 cut(s)	95, 372
MspR9I	CCNGG	1 cut(s)	95
Mva1269I	GAATGC	2 cut(s)	1330, 1483
MvnI	CGCG	1 cut(s)	47
NciI	CCSGG	1 cut(s)	95
NdeII	GATC	5 cut(s)	232, 238, 455, 1363, 1695
NlaIII	CATG	7 cut(s)	612, 640, 650, 900, 1174, 1307, 1450
NlaIV	GGNNCC	5 cut(s)	12, 74, 1365, 1491, 1849
NmeAIII	GCCGAG	3 cut(s)	1030, 1759, 1786
NmuCI	GTSAC	1 cut(s)	1948
NsiI	ATGCAT	1 cut(s)	808
NspV	TTCGAA	1 cut(s)	87
PaeR7I	CTCGAG	1 cut(s)	442
PagI	TCATGA	1 cut(s)	646
PctI	GAATGC	2 cut(s)	1330, 1483
PfeI	GAWTC	4 cut(s)	348, 419, 584, 1520
PflFI	GACNNNGTC	1 cut(s)	34
PleI	GAGTC	6 cut(s)	104, 220, 259, 310, 1246, 1387
PpsI	GAGTC	6 cut(s)	104, 220, 259, 310, 1246, 1387
PshAI	GACNNNNGTC	1 cut(s)	1076
PspN4I	GGNNCC	5 cut(s)	12, 74, 1365, 1491, 1849
PspPI	GGNCC	5 cut(s)	273, 485, 590, 771, 1871
PstI	CTGCAG	2 cut(s)	1780, 1786
PstNI	CAGNNNCTG	1 cut(s)	1360
PsuI	RGATCY	2 cut(s)	1363, 1695
PsyI	GACNNNGTC	1 cut(s)	34
PvuII	CAGCTG	2 cut(s)	961, 1781
RsaI	GTAC	3 cut(s)	1213, 1231, 1491
RsaNI	GTAC	3 cut(s)	1212, 1230, 1490
RseI	CAYNNNNRTG	2 cut(s)	759, 1955
SaqAI	TTAA	4 cut(s)	248, 410, 426, 1281
Sau3AI	GATC	5 cut(s)	232, 238, 455, 1363, 1695
Sau96I	GGNCC	5 cut(s)	273, 485, 590, 771, 1871
ScaI	AGTACT	1 cut(s)	1231
SchI	GAGTC	6 cut(s)	104, 221, 259, 311, 1247, 1387
ScrFI	CCNGG	1 cut(s)	95
SduI	GDGCHC	3 cut(s)	702, 1726, 1798
SfaNI	GCATC	5 cut(s)	793, 815, 904, 1697, 1870
SfcI	CTRYAG	2 cut(s)	1776, 1782
Sfr274I	CTCGAG	1 cut(s)	442
SfuI	TTCGAA	1 cut(s)	87
SinI	GGWCC	3 cut(s)	273, 590, 1871
SlaI	CTCGAG	1 cut(s)	442
SmiMI	CAYNNNNRTG	2 cut(s)	759, 1955
SmlI	CTYRAG	7 cut(s)	442, 1165, 1225, 1331, 1524, 1797, 1964
SmoI	CTYRAG	7 cut(s)	442, 1165, 1225, 1331, 1524, 1797, 1964
Sse9I	AATT	9 cut(s)	521, 552, 601, 617, 1127, 1146, 1577, 1925, 1938
SspI	AATATT	2 cut(s)	382, 1012
SspMI	CTAG	9 cut(s)	206, 513, 654, 948, 1137, 1209, 1233, 1460, 1494
StyD4I	CCNGG	1 cut(s)	93
TaaI	ACNGT	5 cut(s)	77, 792, 1317, 1405, 1443
TaiI	ACGT	2 cut(s)	38, 416
TaqI	TCGA	8 cut(s)	87, 108, 159, 198, 263, 300, 443, 557
TasI	AATT	9 cut(s)	521, 552, 601, 617, 1127, 1146, 1577, 1925, 1938
TatI	WGTACW	2 cut(s)	1211, 1229
TauI	GCSGC	2 cut(s)	56, 1757
TfiI	GAWTC	4 cut(s)	348, 419, 584, 1520
Tru1I	TTAA	4 cut(s)	248, 410, 426, 1281
Tru9I	TTAA	4 cut(s)	248, 410, 426, 1281
TscAI	CASTG	3 cut(s)	1731, 1819, 1982
TseFI	GTSAC	1 cut(s)	1948
Tsp45I	GTSAC	1 cut(s)	1948
TspGWI	ACGGA	1 cut(s)	247
TspRI	CASTG	3 cut(s)	1731, 1819, 1982
Tth111I	GACNNNGTC	1 cut(s)	34
VpaK11BI	GGWCC	3 cut(s)	273, 590, 1871
XagI	CCTNNNNNAGG	1 cut(s)	754
XapI	RAATTY	1 cut(s)	552
XbaI	TCTAGA	1 cut(s)	1459
XcmI	CCANNNNNNNNNTGG	1 cut(s)	857
XhoI	CTCGAG	1 cut(s)	442
XspI	CTAG	9 cut(s)	206, 513, 654, 948, 1137, 1209, 1233, 1460, 1494
ZrmI	AGTACT	1 cut(s)	1231
Zsp2I	ATGCAT	1 cut(s)	808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.