Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001800

Physical Location & Seq

Genomic Coordinates Reverse (-)

1719958 .. 1725268

Gene Structure 5311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G05790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGCTGAAGTTTCTCACTCCGACTGCTTACGCTTCCCATCACGTGACTCCGGCTACTCGATTCCGGTCTACCCCGGTTAAGAATCTATTGTTCAAGCAACTGACTCTTCTAACCGGATGGAACCGGAGTTCCTACGAATTGGGTCGTCGTTCTTTTTCCTCCGACTTGGATTCCGACACAAAGTCTTCAACTACTACTGTCTCAGCTAAACCTCACCTGGACGATTGTCTAACGGTTATAGCATTGCCATTGCCCCACAAGCCTCTTATTCCTGGCTTTTACATGCCAATATATGTCAAGGATCCTAAAGTTCTTGCAGCTTTACAAGAGAGTAGAAGACAACAAGCTCCATATGCAGGGGCTTTCCTTTTGAAGGATGACGCGTCATCTGACTCATCTTCGAGCTCTGAAACTGAGAATATTCTAGAGAAGTTGAAAGGAAAAGAGTTGATTAACCGGATTCATGAAGTTGGCACACTTGCCCAGATTTCAAGTATCCAAGGTGAGCAAGTCATCCTTATTGGTCACAGACAACTTCGAATAACAGAGATGGTGAGTGAGAGTGAAGATCCCCTAACCGTCAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGGACGATGATGTCATCAAGGCAACATACTTTCAAGTGATGTCGACACTTAGGGATGTCTTAAAGACAACTTCACTCTGGAGAGATCATGTTCGGACATATACCCAGGCATGTTCTCTTCATATTTGGCACTGCTTGAGACATATAGGTGAATTCAATTATCCAAAGTTAGCCGATTTTGGAGCTGGGATCTCTGGCGCTAACAAACATCAAAATCAGGGGGTTCTTGAAGAACTGGATGTTCACAAACGTCTAGAGTTGACGCTGGAATTGGTGAAAAAAGAAGTTGAAATTAACAAGATTCAAGAATCCATAGCAAAAGCTGTTGAAGAAAAATTTAGTGGCGATAGACGTCGTATCATACTAAAGGAGCAGATCAATGCTATAAAAAAGGAGCTTGGCGGGGAGACAGACAGCAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGATTGACCCTATTAAAGACAAGATTCCAGGACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAGCTGTTAGAAACCAGTTCTAGCGAATTCGATGTGACTTGTAACTACCTTGATTGGTTGACCGTGTTGCCTTGGGGAAATTTCAGTGATGAGAATTTTAATGTCCTACGGGCAGAAAAGATTCTTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGCTGTGGGAGGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCAACTGGAGTAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGTTCTCTGTTGGAGGACTATCCGATGTTGCTGAGATTAAGGGGCATCGTCGAACGTATATTGGTGCCATGCCTGGAAAGATGGTGCAGTGTCTAAAGAATGTGGGAACAGAAAATCCTCTTGTTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGGGCCACCATGGCGACCCAGCCAGTGCAATGTTGGAGCTTTTGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTATCTCGATGTTCCTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCATTCCGGGTCCTCTGCTAGACAGAATGGAGGTGATCACTCTCTCAGGGTACATTACTGATGAGAAAATGCATATCGCTAGAGACTATTTGGAGAAAACCGCACGCAGAGATTGTGGCATTAAGCCTGAACAGGTTGATGTGAGCGATGCAGCTTTTCTTTCCTTGATAGAACATTACTGCAGAGAAGCAGGAGTTAGAAATCTCCAGAAGCAGATTGAGAAGATTTTTCGTAAGATTGCTCTTAAACTTGTTCGCAAAGCGGCATCCACCGAAGTGCCTAGAATTTCTGATGATGTTACTACTGACACTGAAGAAACTAAATCTTTGGCCAAGACTGATTTGGAATCTCCAGAGACCTCTGCAGAAGGATCCACTGTGTTGACAGATGAGTTGGCAACTGGGGATCCAACAGAATCAACGACTGAGCAGAGCGGAGAGGTAGCTGAAACGGTTGAAAAGTATATGATTGATGAATCAAACCTTTCAGATTATGTAGGCAAGCCAGTATTCCAGGAAGAGAAGATATATGAGCAGACACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTACATAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGGCTTGGGGATGTGATGAAAGAAAGCGCAGAGATAGCTCACACAGTCGCGAGAAGAATAATGCTGGAGAAAGAACCCGAGAACAAGTTGTTTGCGAATTCCAAGCTTCATCTACATGTACCTGCAGGAGCCACACCAAAAGACGGCCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTATCACTTGCCTTGAAGAAGCCTGTAAGGAAGGATCTTGCAATGACTGGAGAAGTCACTTTGACCGGTAGAATCCTTGCGATTGGCGGCGTGAAAGAGAAGACTATAGCTGCAAGACGGAGTCAAGTGAAGGTGATAATATTCCCTGAGGCTAACCGGAGAGATTTTGATGAGCTGGCGAGAAACGTGAAAGAAGGGCTCGAAGTTCATTTCGTGGATGAATATGAGCAGATTTTCGAGCTAGCCTTTGGCTATGACCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004176 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006508 GO:0006515 GO:0006807 GO:0006996 GO:0007005 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0030163 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0051603 GO:0070011 GO:0070013 GO:0071704 GO:0071840 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA LON_substr_bdg Lon_C

Protein Analysis

942

Amino Acids

104.92

Weight (kDa)

5.79

Isoelectric Point (pI)

44.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LON_substr_bdg	PF02190	79 - 299	6.5e-32	ATP-dependent protease La (LON) substrate-binding domain
AAA	PF00004	452 - 592	2.6e-22	ATPase family associated with various cellular activities (AAA)
Lon_lid	PF22667	615 - 666	2.7e-19	Lon protease AAA+ ATPase lid domain
Lon_C	PF05362	734 - 938	1.9e-76	Lon protease (S16) C-terminal proteolytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001800)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05790 AT3G05790 AT5G26860
fragaria_vesca	FvH4_6g07420 FvH4_7g03300 FvH4_7g03300 FvH4_7g03300
malus_domestica	MD02G1284000.v1.1 MD04G1193200.v1.1 MD07G1050000.v1.1 MD12G1206100.v1.1
prunus_persica	Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.6G313300_v2.0.a1
pyrus_communis	pycom02g24200 pycom04g17100 pycom07g03580 pycom12g19400
rosa_chinensis	RchiOBHm_Chr1g0325611 RchiOBHm_Chr3g0457021
rosa_laevigata	RLG00000025251 RLG00000030117
rosa_multiflora	Rmu_sc0000488.1_g000001
rosa_roxburghii	Rroxscaffold_4G00324580 Rroxscaffold_6G00422260
rosa_rugosa	Rorug01G0053100 Rorug01G0053200 Rorug01G0053200 Rorug03G0018600 Rorug03G0018700
rosa_samantha	Rh1AG068800 Rh1CG069200 Rh1DG073900 Rh3AG078300 Rh3BG080200 Rh3CG080100 Rh3DG081900
rosa_wichuraiana	Rw1G005700 Rw3G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	626
AatII	GACGTC	1 cut(s)	970
Acc36I	ACCTGC	1 cut(s)	2515
AccB1I	GGYRCC	1 cut(s)	1499
AccBSI	CCGCTC	1 cut(s)	2166
AccI	GTMKAC	2 cut(s)	68, 659
AccII	CGCG	2 cut(s)	383, 2435
AciI	CCGC	6 cut(s)	1017, 1423, 1833, 1994, 2166, 2652
AcoI	YGGCCR	1 cut(s)	2061
AcsI	RAATTY	8 cut(s)	767, 950, 1160, 1213, 1228, 1654, 2016, 2482
AcuI	CTGAAG	2 cut(s)	26, 2064
AcvI	CACGTG	2 cut(s)	43, 1412
AcyI	GRCGYC	1 cut(s)	967
AfaI	GTAC	4 cut(s)	1101, 1784, 2327, 2505
AfiI	CCNNNNNNNGG	5 cut(s)	356, 373, 598, 2528, 2540
AflIII	ACRYGT	3 cut(s)	381, 1096, 2500
AgeI	ACCGGT	1 cut(s)	2630
AhdI	GACNNNNNGTC	1 cut(s)	181
AjnI	CCWGG	6 cut(s)	216, 271, 720, 1090, 1507, 2244
AleI	CACNNNNGTG	1 cut(s)	2006
AloI	GAACNNNNNNTCC	6 cut(s)	112, 113, 144, 145, 1534, 1566
Alw21I	GWGCWC	2 cut(s)	407, 1417
Alw26I	GTCTC	7 cut(s)	205, 748, 1016, 1364, 1809, 2081, 2327
Ama87I	CYCGRG	1 cut(s)	2462
AoxI	GGCC	4 cut(s)	1366, 1594, 2061, 2530
ApeKI	GCWGC	5 cut(s)	317, 1135, 1883, 2544, 2675
ApoI	RAATTY	8 cut(s)	767, 950, 1160, 1213, 1228, 1654, 2016, 2482
AsiGI	ACCGGT	1 cut(s)	2630
Asp700I	GAANNNNTTC	1 cut(s)	1254
AspLEI	GCGC	3 cut(s)	815, 2414, 2540
AspS9I	GGNCC	4 cut(s)	1367, 1594, 1742, 2531
AsuC2I	CCSGG	2 cut(s)	74, 1740
AsuHPI	GGTGA	7 cut(s)	206, 515, 565, 776, 901, 1777, 2710
AsuII	TTCGAA	1 cut(s)	538
AsuNHI	GCTAGC	1 cut(s)	2806
AvaI	CYCGRG	1 cut(s)	2462
AvaII	GGWCC	1 cut(s)	1742
AxyI	CCTNAGG	1 cut(s)	2712
BalI	TGGCCA	1 cut(s)	2063
BamHI	GGATCC	4 cut(s)	301, 1636, 2102, 2137
BanI	GGYRCC	1 cut(s)	1499
BanII	GRGCYC	3 cut(s)	407, 2318, 2766
BbrPI	CACGTG	2 cut(s)	43, 1412
BbsI	GAAGAC	4 cut(s)	177, 343, 2363, 2672
Bbv12I	GWGCWC	2 cut(s)	407, 1417
BbvI	GCAGC	5 cut(s)	329, 1147, 1895, 2531, 2662
BccI	CCATC	5 cut(s)	45, 111, 544, 600, 1510
BceAI	ACGGC	1 cut(s)	2545
BciT130I	CCWGG	6 cut(s)	218, 273, 722, 1092, 1509, 2246
BciVI	GTATCC	1 cut(s)	506
BclI	TGATCA	1 cut(s)	1767
BcnI	CCSGG	2 cut(s)	74, 1740
BcoDI	GTCTC	7 cut(s)	205, 748, 1016, 1364, 1809, 2081, 2327
BfmI	CTRYAG	5 cut(s)	1133, 1912, 2094, 2508, 2670
BfoI	RGCGCY	1 cut(s)	816
BfuAI	ACCTGC	1 cut(s)	2515
BfuI	GTATCC	1 cut(s)	506
BglI	GCCNNNNNGGC	1 cut(s)	1602
BisI	GCNGC	7 cut(s)	318, 1136, 1884, 1995, 2545, 2653, 2676
BlsI	GCNGC	7 cut(s)	319, 1137, 1885, 1996, 2546, 2654, 2677
Bme1390I	CCNGG	8 cut(s)	74, 218, 273, 722, 1092, 1509, 1740, 2246
Bme18I	GGWCC	1 cut(s)	1742
BmeRI	GACNNNNNGTC	1 cut(s)	181
BmeT110I	CYCGRG	1 cut(s)	2462
BmgT120I	GGNCC	4 cut(s)	1367, 1594, 1742, 2531
BmiI	GGNNCC	9 cut(s)	122, 303, 1501, 1595, 1638, 1743, 2104, 2139, 2515
BmrFI	CCNGG	8 cut(s)	74, 218, 273, 722, 1092, 1509, 1740, 2246
BmrI	ACTGGG	1 cut(s)	2142
BmsI	GCATC	3 cut(s)	1489, 1870, 2006
BmtI	GCTAGC	1 cut(s)	2810
BmuI	ACTGGG	1 cut(s)	2142
BoxI	GACNNNNGTC	2 cut(s)	225, 2273
BpiI	GAAGAC	4 cut(s)	177, 343, 2363, 2672
BpmI	CTGGAG	6 cut(s)	715, 1395, 1922, 2067, 2471, 2634
Bpu14I	TTCGAA	1 cut(s)	538
BpuEI	CTTGAG	1 cut(s)	772
BpuMI	CCSGG	2 cut(s)	74, 1740
Bsa29I	ATCGAT	1 cut(s)	1566
BsaAI	YACGTR	2 cut(s)	43, 1412
BsaHI	GRCGYC	1 cut(s)	967
BsaI	GGTCTC	1 cut(s)	2081
BsaJI	CCNNGG	7 cut(s)	72, 499, 720, 1205, 1600, 1695, 2307
BsaWI	WCCGGW	7 cut(s)	63, 113, 123, 456, 1434, 2630, 2721
Bsc4I	CCNNNNNNNGG	5 cut(s)	356, 373, 598, 2528, 2540
Bse118I	RCCGGY	1 cut(s)	2630
Bse1I	ACTGG	8 cut(s)	855, 1149, 1378, 1614, 2137, 2237, 2273, 2617
Bse21I	CCTNAGG	1 cut(s)	2712
Bse3DI	GCAATG	5 cut(s)	242, 248, 1626, 2561, 2613
BseBI	CCWGG	6 cut(s)	218, 273, 722, 1092, 1509, 2246
BseCI	ATCGAT	1 cut(s)	1566
BseDI	CCNNGG	7 cut(s)	72, 499, 720, 1205, 1600, 1695, 2307
BseGI	GGATG	9 cut(s)	122, 382, 513, 676, 859, 1997, 2303, 2401, 2788
BseLI	CCNNNNNNNGG	5 cut(s)	356, 373, 598, 2528, 2540
BseMI	GCAATG	5 cut(s)	242, 248, 1626, 2561, 2613
BseMII	CTCAG	6 cut(s)	216, 405, 1458, 1791, 2148, 2703
BseNI	ACTGG	8 cut(s)	855, 1149, 1378, 1614, 2137, 2237, 2273, 2617
BseXI	GCAGC	5 cut(s)	329, 1147, 1895, 2531, 2662
BseYI	CCCAGC	2 cut(s)	800, 1609
BsgI	GTGCAG	3 cut(s)	1023, 1541, 2530
Bsh1236I	CGCG	2 cut(s)	383, 2435
BshFI	GGCC	4 cut(s)	1368, 1596, 2063, 2532
BshNI	GGYRCC	1 cut(s)	1499
BshTI	ACCGGT	1 cut(s)	2630
BshVI	ATCGAT	1 cut(s)	1566
BsiHKAI	GWGCWC	2 cut(s)	407, 1417
BsiHKCI	CYCGRG	1 cut(s)	2462
BslI	CCNNNNNNNGG	5 cut(s)	356, 373, 598, 2528, 2540
BsmAI	GTCTC	7 cut(s)	205, 748, 1016, 1364, 1809, 2081, 2327
BsmI	GAATGC	1 cut(s)	1654
BsnI	GGCC	4 cut(s)	1368, 1596, 2063, 2532
Bso31I	GGTCTC	1 cut(s)	2081
BsoBI	CYCGRG	1 cut(s)	2462
Bsp119I	TTCGAA	1 cut(s)	538
Bsp1286I	GDGCHC	4 cut(s)	407, 1417, 2318, 2766
Bsp1407I	TGTACA	1 cut(s)	2325
Bsp19I	CCATGG	2 cut(s)	1600, 2307
Bsp68I	TCGCGA	1 cut(s)	2435
BspACI	CCGC	6 cut(s)	1017, 1423, 1833, 1994, 2166, 2652
BspANI	GGCC	4 cut(s)	1368, 1596, 2063, 2532
BspCNI	CTCAG	6 cut(s)	215, 406, 1459, 1790, 2149, 2704
BspDI	ATCGAT	1 cut(s)	1566
BspFNI	CGCG	2 cut(s)	383, 2435
BspHI	TCATGA	1 cut(s)	463
BspLI	GGNNCC	9 cut(s)	122, 303, 1501, 1595, 1638, 1743, 2104, 2139, 2515
BspMAI	CTGCAG	4 cut(s)	1137, 1916, 2098, 2512
BspMI	ACCTGC	1 cut(s)	2515
BspOI	GCTAGC	1 cut(s)	2810
BspQI	GCTCTTC	1 cut(s)	1113
BspT104I	TTCGAA	1 cut(s)	538
BspT107I	GGYRCC	1 cut(s)	1499
BspTNI	GGTCTC	1 cut(s)	2081
BsrBI	CCGCTC	1 cut(s)	2166
BsrDI	GCAATG	5 cut(s)	242, 248, 1626, 2561, 2613
BsrFI	RCCGGY	1 cut(s)	2630
BsrGI	TGTACA	1 cut(s)	2325
BsrI	ACTGG	8 cut(s)	855, 1149, 1378, 1614, 2137, 2237, 2273, 2617
BssAI	RCCGGY	1 cut(s)	2630
BssECI	CCNNGG	7 cut(s)	72, 499, 720, 1205, 1600, 1695, 2307
BssNI	GRCGYC	1 cut(s)	967
BssT1I	CCWWGG	5 cut(s)	499, 1205, 1600, 1695, 2307
Bst2UI	CCWGG	6 cut(s)	218, 273, 722, 1092, 1509, 2246
Bst4CI	ACNGT	7 cut(s)	199, 235, 580, 1198, 2110, 2185, 2431
Bst6I	CTCTTC	4 cut(s)	111, 738, 1113, 2244
BstACI	GRCGYC	1 cut(s)	967
BstAUI	TGTACA	1 cut(s)	2325
BstBAI	YACGTR	2 cut(s)	43, 1412
BstBI	TTCGAA	1 cut(s)	538
BstC8I	GCNNGC	5 cut(s)	1837, 2234, 2542, 2742, 2808
BstDEI	CTNAG	8 cut(s)	202, 414, 665, 1328, 1467, 1777, 2157, 2712
BstDSI	CCRYGG	2 cut(s)	1600, 2307
BstENI	CCTNNNNNAGG	1 cut(s)	371
BstF5I	GGATG	9 cut(s)	122, 382, 513, 676, 859, 1997, 2303, 2401, 2788
BstFNI	CGCG	2 cut(s)	383, 2435
BstH2I	RGCGCY	1 cut(s)	816
BstHHI	GCGC	3 cut(s)	815, 2414, 2540
BstMAI	GTCTC	7 cut(s)	205, 748, 1016, 1364, 1809, 2081, 2327
BstMWI	GCNNNNNNNGC	5 cut(s)	259, 353, 1602, 2420, 2544
BstNI	CCWGG	6 cut(s)	218, 273, 722, 1092, 1509, 2246
BstNSI	RCATGY	4 cut(s)	286, 729, 1100, 2504
BstPAI	GACNNNNGTC	2 cut(s)	225, 2273
BstSCI	CCNGG	8 cut(s)	72, 216, 271, 720, 1090, 1507, 1738, 2244
BstSFI	CTRYAG	5 cut(s)	1133, 1912, 2094, 2508, 2670
BstUI	CGCG	2 cut(s)	383, 2435
BstV1I	GCAGC	5 cut(s)	329, 1147, 1895, 2531, 2662
BstV2I	GAAGAC	4 cut(s)	177, 343, 2363, 2672
BstX2I	RGATCY	7 cut(s)	301, 568, 804, 1636, 2102, 2137, 2599
BstYI	RGATCY	7 cut(s)	301, 568, 804, 1636, 2102, 2137, 2599
Bsu15I	ATCGAT	1 cut(s)	1566
Bsu36I	CCTNAGG	1 cut(s)	2712
BsuI	GTATCC	1 cut(s)	506
BsuRI	GGCC	4 cut(s)	1368, 1596, 2063, 2532
BsuTUI	ATCGAT	1 cut(s)	1566
BtgI	CCRYGG	2 cut(s)	1600, 2307
BtgZI	GCGATG	1 cut(s)	1893
BtsCI	GGATG	9 cut(s)	122, 382, 513, 676, 859, 1997, 2303, 2401, 2788
BtsI	GCAGTG	2 cut(s)	745, 1529
BtsIMutI	CAGTG	6 cut(s)	745, 1225, 1529, 1621, 2040, 2106
BtuMI	TCGCGA	1 cut(s)	2435
BveI	ACCTGC	1 cut(s)	2515
Cac8I	GCNNGC	5 cut(s)	1837, 2234, 2542, 2742, 2808
CciI	TCATGA	1 cut(s)	463
CfoI	GCGC	3 cut(s)	815, 2414, 2540
Cfr10I	RCCGGY	1 cut(s)	2630
Cfr13I	GGNCC	4 cut(s)	1367, 1594, 1742, 2531
ClaI	ATCGAT	1 cut(s)	1566
CseI	GACGC	3 cut(s)	372, 389, 886
Csp6I	GTAC	4 cut(s)	1100, 1783, 2326, 2504
CspAI	ACCGGT	1 cut(s)	2630
CviQI	GTAC	4 cut(s)	1100, 1783, 2326, 2504
DdeI	CTNAG	8 cut(s)	202, 414, 665, 1328, 1467, 1777, 2157, 2712
DrdI	GACNNNNNNGTC	1 cut(s)	626
DriI	GACNNNNNGTC	1 cut(s)	181
DseDI	GACNNNNNNGTC	1 cut(s)	626
EaeI	YGGCCR	1 cut(s)	2061
Eam1104I	CTCTTC	4 cut(s)	111, 738, 1113, 2244
Eam1105I	GACNNNNNGTC	1 cut(s)	181
EarI	CTCTTC	4 cut(s)	111, 738, 1113, 2244
Ecl136II	GAGCTC	1 cut(s)	405
Eco130I	CCWWGG	5 cut(s)	499, 1205, 1600, 1695, 2307
Eco24I	GRGCYC	3 cut(s)	407, 2318, 2766
Eco31I	GGTCTC	1 cut(s)	2081
Eco47I	GGWCC	1 cut(s)	1742
Eco53kI	GAGCTC	1 cut(s)	405
Eco57I	CTGAAG	2 cut(s)	26, 2064
Eco72I	CACGTG	2 cut(s)	43, 1412
Eco81I	CCTNAGG	1 cut(s)	2712
Eco88I	CYCGRG	1 cut(s)	2462
EcoICRI	GAGCTC	1 cut(s)	405
EcoNI	CCTNNNNNAGG	1 cut(s)	371
EcoO109I	RGGNCCY	1 cut(s)	1742
EcoRI	GAATTC	3 cut(s)	767, 1160, 2482
EcoRII	CCWGG	6 cut(s)	216, 271, 720, 1090, 1507, 2244
EcoT14I	CCWWGG	5 cut(s)	499, 1205, 1600, 1695, 2307
EcoT22I	ATGCAT	1 cut(s)	1806
EcoT38I	GRGCYC	3 cut(s)	407, 2318, 2766
ErhI	CCWWGG	5 cut(s)	499, 1205, 1600, 1695, 2307
FalI	AAGNNNNNCTT	6 cut(s)	501, 533, 1107, 1139, 2355, 2387
FauI	CCCGC	1 cut(s)	1010
FauNDI	CATATG	2 cut(s)	352, 610
FbaI	TGATCA	1 cut(s)	1767
FblI	GTMKAC	2 cut(s)	68, 659
Fnu4HI	GCNGC	7 cut(s)	318, 1136, 1884, 1995, 2545, 2653, 2676
FokI	GGATG	9 cut(s)	129, 389, 500, 683, 866, 1984, 2290, 2408, 2795
FriOI	GRGCYC	3 cut(s)	407, 2318, 2766
Fsp4HI	GCNGC	7 cut(s)	318, 1136, 1884, 1995, 2545, 2653, 2676
GlaI	GCGC	3 cut(s)	814, 2413, 2539
GluI	GCNGC	7 cut(s)	318, 1136, 1884, 1995, 2545, 2653, 2676
GsaI	CCCAGC	2 cut(s)	804, 1613
GsuI	CTGGAG	6 cut(s)	715, 1395, 1922, 2067, 2471, 2634
HaeII	RGCGCY	1 cut(s)	816
HaeIII	GGCC	4 cut(s)	1368, 1596, 2063, 2532
HgaI	GACGC	3 cut(s)	372, 389, 886
HhaI	GCGC	3 cut(s)	815, 2414, 2540
Hin1I	GRCGYC	1 cut(s)	967
Hin6I	GCGC	3 cut(s)	813, 2412, 2538
HinP1I	GCGC	3 cut(s)	813, 2412, 2538
HincII	GTYRAC	5 cut(s)	589, 660, 876, 1194, 2115
HindII	GTYRAC	5 cut(s)	589, 660, 876, 1194, 2115
HindIII	AAGCTT	2 cut(s)	1580, 2489
HphI	GGTGA	7 cut(s)	206, 515, 565, 776, 901, 1777, 2710
Hpy166II	GTNNAC	7 cut(s)	69, 589, 660, 859, 876, 1194, 2115
Hpy8I	GTNNAC	7 cut(s)	69, 589, 660, 859, 876, 1194, 2115
Hpy99I	CGWCG	3 cut(s)	150, 972, 1488
HpyAV	CCTTC	7 cut(s)	367, 2093, 2345, 2351, 2590, 2689, 2753
HpyCH4III	ACNGT	7 cut(s)	199, 235, 580, 1198, 2110, 2185, 2431
HpyCH4IV	ACGT	7 cut(s)	42, 865, 967, 1411, 1490, 1722, 2751
HpyF10VI	GCNNNNNNNGC	5 cut(s)	259, 353, 1602, 2420, 2544
HpyF3I	CTNAG	8 cut(s)	202, 414, 665, 1328, 1467, 1777, 2157, 2712
HpySE526I	ACGT	7 cut(s)	42, 865, 967, 1411, 1490, 1722, 2751
Hsp92I	GRCGYC	1 cut(s)	967
HspAI	GCGC	3 cut(s)	813, 2412, 2538
Ksp22I	TGATCA	1 cut(s)	1767
LguI	GCTCTTC	1 cut(s)	1113
LmnI	GCTCC	6 cut(s)	352, 797, 985, 1009, 1627, 2513
Lsp1109I	GCAGC	5 cut(s)	329, 1147, 1895, 2531, 2662
LweI	GCATC	3 cut(s)	1489, 1870, 2006
MaeII	ACGT	7 cut(s)	42, 865, 967, 1411, 1490, 1722, 2751
MaeIII	GTNAC	7 cut(s)	43, 524, 1168, 1175, 1723, 2029, 2620
MbiI	CCGCTC	1 cut(s)	2166
MfeI	CAATTG	1 cut(s)	1404
MflI	RGATCY	7 cut(s)	301, 568, 804, 1636, 2102, 2137, 2599
MhlI	GDGCHC	4 cut(s)	407, 1417, 2318, 2766
MlsI	TGGCCA	1 cut(s)	2063
MluI	ACGCGT	1 cut(s)	381
MluNI	TGGCCA	1 cut(s)	2063
MlyI	GAGTC	4 cut(s)	40, 97, 386, 2695
MmeI	TCCRAC	6 cut(s)	44, 186, 198, 1426, 1605, 2165
Mox20I	TGGCCA	1 cut(s)	2063
Mph1103I	ATGCAT	1 cut(s)	1806
MroXI	GAANNNNTTC	1 cut(s)	1254
MscI	TGGCCA	1 cut(s)	2063
MslI	CAYNNNNRTG	3 cut(s)	762, 2006, 2499
Msp20I	TGGCCA	1 cut(s)	2063
MspA1I	CMGCKG	1 cut(s)	1138
MspR9I	CCNGG	8 cut(s)	74, 218, 273, 722, 1092, 1509, 1740, 2246
MunI	CAATTG	1 cut(s)	1404
Mva1269I	GAATGC	1 cut(s)	1654
MvaI	CCWGG	6 cut(s)	218, 273, 722, 1092, 1509, 2246
MvnI	CGCG	2 cut(s)	383, 2435
MwoI	GCNNNNNNNGC	5 cut(s)	259, 353, 1602, 2420, 2544
NciI	CCSGG	2 cut(s)	74, 1740
NcoI	CCATGG	2 cut(s)	1600, 2307
NdeI	CATATG	2 cut(s)	352, 610
NheI	GCTAGC	1 cut(s)	2806
NlaIV	GGNNCC	9 cut(s)	122, 303, 1501, 1595, 1638, 1743, 2104, 2139, 2515
NmuCI	GTSAC	5 cut(s)	43, 524, 1168, 1723, 2620
NruI	TCGCGA	1 cut(s)	2435
NsiI	ATGCAT	1 cut(s)	1806
NspI	RCATGY	4 cut(s)	286, 729, 1100, 2504
NspV	TTCGAA	1 cut(s)	538
OliI	CACNNNNGTG	1 cut(s)	2006
PagI	TCATGA	1 cut(s)	463
PciI	ACATGT	2 cut(s)	1096, 2500
PciSI	GCTCTTC	1 cut(s)	1113
PctI	GAATGC	1 cut(s)	1654
PdmI	GAANNNNTTC	1 cut(s)	1254
PflFI	GACNNNGTC	1 cut(s)	2685
PfoI	TCCNGGA	2 cut(s)	1090, 2244
PinAI	ACCGGT	1 cut(s)	2630
PkrI	GCNGC	7 cut(s)	319, 1137, 1885, 1996, 2546, 2654, 2677
PleI	GAGTC	4 cut(s)	40, 97, 386, 2694
PmaCI	CACGTG	2 cut(s)	43, 1412
PmlI	CACGTG	2 cut(s)	43, 1412
PpsI	GAGTC	4 cut(s)	40, 97, 386, 2694
Ppu21I	YACGTR	2 cut(s)	43, 1412
PpuMI	RGGWCCY	1 cut(s)	1742
PscI	ACATGT	2 cut(s)	1096, 2500
PshAI	GACNNNNGTC	2 cut(s)	225, 2273
Psp124BI	GAGCTC	1 cut(s)	407
Psp5II	RGGWCCY	1 cut(s)	1742
Psp6I	CCWGG	6 cut(s)	216, 271, 720, 1090, 1507, 2244
PspCI	CACGTG	2 cut(s)	43, 1412
PspFI	CCCAGC	2 cut(s)	800, 1609
PspGI	CCWGG	6 cut(s)	216, 271, 720, 1090, 1507, 2244
PspN4I	GGNNCC	9 cut(s)	122, 303, 1501, 1595, 1638, 1743, 2104, 2139, 2515
PspPI	GGNCC	4 cut(s)	1367, 1594, 1742, 2531
PspPPI	RGGWCCY	1 cut(s)	1742
PstI	CTGCAG	4 cut(s)	1137, 1916, 2098, 2512
PsuI	RGATCY	7 cut(s)	301, 568, 804, 1636, 2102, 2137, 2599
PsyI	GACNNNGTC	1 cut(s)	2685
PvuII	CAGCTG	1 cut(s)	1138
RruI	TCGCGA	1 cut(s)	2435
RsaI	GTAC	4 cut(s)	1101, 1784, 2327, 2505
RsaNI	GTAC	4 cut(s)	1100, 1783, 2326, 2504
RseI	CAYNNNNRTG	3 cut(s)	762, 2006, 2499
SacI	GAGCTC	1 cut(s)	407
SalI	GTCGAC	1 cut(s)	658
SapI	GCTCTTC	1 cut(s)	1113
SatI	GCNGC	7 cut(s)	318, 1136, 1884, 1995, 2545, 2653, 2676
Sau96I	GGNCC	4 cut(s)	1367, 1594, 1742, 2531
SbfI	CCTGCAGG	1 cut(s)	2512
SchI	GAGTC	4 cut(s)	40, 97, 386, 2695
ScrFI	CCNGG	8 cut(s)	74, 218, 273, 722, 1092, 1509, 1740, 2246
SdaI	CCTGCAGG	1 cut(s)	2512
SduI	GDGCHC	4 cut(s)	407, 1417, 2318, 2766
SfaNI	GCATC	3 cut(s)	1489, 1870, 2006
SfcI	CTRYAG	5 cut(s)	1133, 1912, 2094, 2508, 2670
SfuI	TTCGAA	1 cut(s)	538
SinI	GGWCC	1 cut(s)	1742
SmiMI	CAYNNNNRTG	3 cut(s)	762, 2006, 2499
SmlI	CTYRAG	1 cut(s)	751
SmoI	CTYRAG	1 cut(s)	751
Sse8387I	CCTGCAGG	1 cut(s)	2512
SsiI	CCGC	6 cut(s)	1017, 1423, 1833, 1994, 2166, 2652
SspI	AATATT	2 cut(s)	421, 2706
SstI	GAGCTC	1 cut(s)	407
StyD4I	CCNGG	8 cut(s)	72, 216, 271, 720, 1090, 1507, 1738, 2244
StyI	CCWWGG	5 cut(s)	499, 1205, 1600, 1695, 2307
TaaI	ACNGT	7 cut(s)	199, 235, 580, 1198, 2110, 2185, 2431
TaiI	ACGT	7 cut(s)	45, 868, 970, 1414, 1493, 1725, 2754
TatI	WGTACW	2 cut(s)	1099, 2325
TauI	GCSGC	2 cut(s)	1997, 2655
TscAI	CASTG	6 cut(s)	752, 1225, 1529, 1621, 2047, 2113
TseFI	GTSAC	5 cut(s)	43, 524, 1168, 1723, 2620
TseI	GCWGC	5 cut(s)	317, 1135, 1883, 2544, 2675
Tsp45I	GTSAC	5 cut(s)	43, 524, 1168, 1723, 2620
TspGWI	ACGGA	2 cut(s)	1290, 2698
TspRI	CASTG	6 cut(s)	752, 1225, 1529, 1621, 2047, 2113
Tth111I	GACNNNGTC	1 cut(s)	2685
VpaK11BI	GGWCC	1 cut(s)	1742
XagI	CCTNNNNNAGG	1 cut(s)	371
XapI	RAATTY	8 cut(s)	767, 950, 1160, 1213, 1228, 1654, 2016, 2482
XbaI	TCTAGA	3 cut(s)	424, 868, 1660
XceI	RCATGY	4 cut(s)	286, 729, 1100, 2504
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1621, 2071
XmiI	GTMKAC	2 cut(s)	68, 659
XmnI	GAANNNNTTC	1 cut(s)	1254
ZraI	GACGTC	1 cut(s)	968
Zsp2I	ATGCAT	1 cut(s)	1806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.