Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001800

Physical Location & Seq

Genomic Coordinates Reverse (-)

3623815 .. 3631458

Gene Structure 7644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g03300.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2757 bp

ATGCTGAAACTCCTCTCTCCTTCTTCCCCGGCGGCCTCGCCGTTTCTCCGAGCTCTTGGGTCGGTCACCGGCCTCACTCGCCGGAATCCCAACTTGGCCCGTCGAGCTTTTCTTTGCTCCGACGCTAAAAACGGTAATGGTGCAGTGGAAATCGAGTTTAGGGGGATAGGAAATGAAGCGGAGGCTGAGTCTAAGTCTTCATCATCATCAACTGTCATACCCACAAATGTTGATCCTGAAGATTATGTAAAGGTTTTAGCATTGCCATTGCCGCATAGGCCGCTGTTTCCAGGTTTCTATATGCCAATATATGTGAAGGATCCTAAACTATTAGCAGCTCTACAGGAAAGTAGAAACCGGCAAGTTCCATATGCTGGTGCTTTCCTTGTCAAGGATGAACCAGGTACTGACCCGAGTATGTCAGGTGCTGAGACGAAGATTCATGATTTGAAAGGGAAAGAGTTGTTTGATCGTCTGCATGAAATTGGTACGCTTGCCCAGATTTCAAGCATTCAAGGAGACCGAGTAGTCCTAATCGGCCATAGGCGACTTCGAATTACAGAGATGGTTGATGGGGATCCCATGACTGTAAAAGTTGATCATCTCGAAGATAAGTCATATGACAAGGATGATGATGTCATAAAGGAAACATCGTCTCAGGTTATATCAACTCTAGGTGAGGTTCTGAAGATTAGTGCTCATTGGAGAGATCATGCTCAAACATACAATCAGCATATAAATGATTTTAATTGTACAAGGATAGCAGATTTTGGGGCTGCTATATCTGGTGCAGACAAATTGCAATGCCAAAAAGTTCTTGAAGAGCTAGATGTGCATGAACGTTTAAAGCTCACACTAGAATTAGTGAAGAAAGAGATGGAGATCAGTAGTATTCAGGCATCTCTTATGAAAAAAATGGAAGAGAAAATGCTTGCTGAGCAACGCCGCAACATGTTAAATGAGCAGCTTAAAGCAATAAAGAAGGAACTGGGATTAGAGGCTGATGATAGAACAGCGCTTTGTGAAAAGTTTAGGGAGAGGCTTGAACCAAAAAGGGAAAAGTGCCCACCTAATGTTTTGCAAGTCATAGAAGAAGAGCTTAGCAAAATGCAGCTGTTGGATGCCAGTTCGAGTGAATTTAATGTAACACGTATTTATCTAGATTGGTTGATTTCACTTCCCTGGGAAAATTACAGTGATGAGAATTTTGATGTTCTTCGGGCGCAGAAAGTTCTAGATGAAGATCATTATGGATTAACTGAAGTAAAAGAAAGGATATTGGAATTTATTGCTGTTGGAAAACTCAGAGGAATGTCAGAAGGAAAAATTATCTGTCTCGCTGGCCCACCTGGAGTAGGAAAAACCAGCATTGGTCGTTCAATTGCACGTGCGTTGAACCGTAATTTCTTTCGATTTTCTGTAGGAGGATTAACTGATGTTGCTGAAATTAAGGGGCATCGTCGAACCTACATTGGTGCCATGCCAGGAAAGATGGTACAATGCCTTAAAACTGTGGGAACAGCTAACCCTCTGGTTCTGATCGATGAGATTGACAAGGTGGGAAGGGGGCATGCTGGTGATCCGGCAAGTGCATTGTTGGAGCTTCTTGATCCAGAGCAAAACTCTAATTTTCTAGACCATTATCTTGACGTTCCACTTGACCTATCTAAGGTTCTGTTTGTTTGTACAGCAAATGTTGTGCACTGGATTCCAACTCCTCTGTTGGACAGAATGGAGGTAGTCTCCATCGCTGGATACATTACTGATGAGAAAATCCACATTGCTAGAGAGTACTTGGAGAAGATCACACGTAAAGCATGTGGCATTAAACCTGAACAGGTTGAGGTGACCGATGCAGCTCTTCTTGAACTCATTGAAAATTATTGCCGGGAAGCTGGTGTTAGGAACCTCCAGCAGCACATAGAAAGGATCTACCGTAAGATAGCTCTGCAACTTGTTAGACAAGGAGCAGCAAATGAAATGGCAGTTGGTGATCAAATACAGTCTCTCTCAGATGAACCCACAGGTGTTGAAGGTGATAAACATGTAGTTGATTCAAAGGTTCCAAGAGTTACTGGAAATATTCCAAAAACCAAAGCAACAAAAACAGTTGAGAAAGTGTTGGTTGATTCATCAAGTTTGTCTGATTTTGTTGGGAAACCGGTTTTCCATGCTGAACACATCTACGAACAGACTCCAGTTGGAGTTGTTATGGGTCTTGCTTGGACTGCCATGGGTGGTTGCCCCTTGTATATAGAGACTACTCAGGTTGAGGAAGGTCTGGGGAAAGGCGCTCTTCAAGTCACAGGCCAACTTGGTGATGTCATGAGAGAAAGTGCCCGCATTGCTCACACTGTTGCCAGATCGATATTGCTTGGTAAAGAGCCAGATAACACTTTCTTTGCTGATTCCAAGCTTCATCTCCATATTCCTGCAGGGGCCATACCTAAGGATGGGCCCAGTGCTGGTTGTACTATGATAACATCCATGCTCTCCCTTGCCATGAAGAAGCCTATCAAGAAGGATTTAGCAATGACTGGGGAAGTAACACTAACTGGAAGGATCCTTCCAATTGGTGGGGTAAAGGAGAAGACAATAGCAGCGACGAGGGGCGGAGTGAAGACCATCATATTCCCTTCAGCTAACAAGAGGGATTTTGAGGAACTTACCCCCAATGTAAAGGAAGGGCTGGATGTTCACTTTGTAGATGACTACAGTCAGATATTCAACTTGGCTTTCGGTGATCACGAGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004176 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006508 GO:0006515 GO:0006807 GO:0006996 GO:0007005 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0030163 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0051603 GO:0070011 GO:0070013 GO:0071704 GO:0071840 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA LON_substr_bdg Lon_C

Protein Analysis

919

Amino Acids

101.52

Weight (kDa)

5.91

Isoelectric Point (pI)

38.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LON_substr_bdg	PF02190	85 - 291	1.9e-34	ATP-dependent protease La (LON) substrate-binding domain
AAA	PF00004	444 - 581	8.6e-23	ATPase family associated with various cellular activities (AAA)
AAA_5	PF07728	444 - 578	2.2e-07	AAA domain (dynein-related subfamily)
Lon_lid	PF22667	605 - 656	9.3e-19	Lon protease AAA+ ATPase lid domain
Lon_C	PF05362	709 - 913	2.9e-74	Lon protease (S16) C-terminal proteolytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001800)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05790 AT3G05790 AT5G26860
fragaria_vesca	FvH4_6g07420 FvH4_7g03300 FvH4_7g03300 FvH4_7g03300
malus_domestica	MD02G1284000.v1.1 MD04G1193200.v1.1 MD07G1050000.v1.1 MD12G1206100.v1.1
prunus_persica	Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.6G313300_v2.0.a1
pyrus_communis	pycom02g24200 pycom04g17100 pycom07g03580 pycom12g19400
rosa_chinensis	RchiOBHm_Chr1g0325611 RchiOBHm_Chr3g0457021
rosa_laevigata	RLG00000025251 RLG00000030117
rosa_multiflora	Rmu_sc0000488.1_g000001
rosa_roxburghii	Rroxscaffold_4G00324580 Rroxscaffold_6G00422260
rosa_rugosa	Rorug01G0053100 Rorug01G0053200 Rorug01G0053200 Rorug03G0018600 Rorug03G0018700
rosa_samantha	Rh1AG068800 Rh1CG069200 Rh1DG073900 Rh3AG078300 Rh3BG080200 Rh3CG080100 Rh3DG081900
rosa_wichuraiana	Rw1G005700 Rw3G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	527
AccB1I	GGYRCC	1 cut(s)	1475
AccB7I	CCANNNNNTGG	2 cut(s)	374, 2576
AciI	CCGC	7 cut(s)	32, 179, 272, 281, 946, 2341, 2613
AclI	AACGTT	1 cut(s)	841
AcoI	YGGCCR	1 cut(s)	538
AcsI	RAATTY	3 cut(s)	1136, 1204, 1283
AcuI	CTGAAG	4 cut(s)	258, 707, 1281, 2622
AcvI	CACGTG	1 cut(s)	1388
AfaI	GTAC	7 cut(s)	406, 490, 754, 1497, 1687, 1793, 2473
AfeI	AGCGCT	1 cut(s)	1017
AfiI	CCNNNNNNNGG	7 cut(s)	374, 391, 1355, 1669, 2453, 2465, 2576
AflIII	ACRYGT	4 cut(s)	951, 1148, 1808, 2044
AgeI	ACCGGT	1 cut(s)	2161
AjnI	CCWGG	5 cut(s)	289, 400, 1181, 1348, 1483
AjuI	GAANNNNNNNTTGG	4 cut(s)	77, 109, 1971, 2003
Alw21I	GWGCWC	3 cut(s)	55, 700, 1704
Alw26I	GTCTC	7 cut(s)	425, 513, 660, 1340, 1747, 2010, 2252
Alw44I	GTGCAC	1 cut(s)	1700
AlwNI	CAGNNNCTG	2 cut(s)	407, 428
Ama87I	CYCGRG	1 cut(s)	412
Aor51HI	AGCGCT	1 cut(s)	1017
AoxI	GGCC	9 cut(s)	33, 70, 96, 278, 538, 1342, 2308, 2439, 2456
ApaI	GGGCCC	1 cut(s)	2460
ApaLI	GTGCAC	1 cut(s)	1700
ApeKI	GCWGC	8 cut(s)	335, 776, 964, 1111, 1856, 1915, 1970, 2600
ApoI	RAATTY	3 cut(s)	1136, 1204, 1283
AsiGI	ACCGGT	1 cut(s)	2161
AspLEI	GCGC	3 cut(s)	1018, 1225, 2294
AspS9I	GGNCC	5 cut(s)	97, 1343, 2439, 2456, 2457
AsuC2I	CCSGG	2 cut(s)	29, 1889
AsuHPI	GGTGA	8 cut(s)	58, 689, 1589, 1858, 2003, 2048, 2330, 2753
AsuII	TTCGAA	1 cut(s)	553
AvaI	CYCGRG	1 cut(s)	412
AxyI	CCTNAGG	1 cut(s)	2448
BaeGI	GKGCMC	4 cut(s)	1067, 1704, 2341, 2460
BamHI	GGATCC	3 cut(s)	319, 577, 2562
BanI	GGYRCC	1 cut(s)	1475
BanII	GRGCYC	2 cut(s)	55, 2460
BauI	CACGAG	1 cut(s)	2747
BbrPI	CACGTG	1 cut(s)	1388
BbsI	GAAGAC	3 cut(s)	189, 2597, 2627
Bbv12I	GWGCWC	3 cut(s)	55, 700, 1704
BbvI	GCAGC	8 cut(s)	347, 763, 976, 1123, 1868, 1927, 1982, 2612
BccI	CCATC	7 cut(s)	559, 566, 871, 1486, 1754, 2447, 2633
BceAI	ACGGC	1 cut(s)	25
BciT130I	CCWGG	5 cut(s)	291, 402, 1183, 1350, 1485
BciVI	GTATCC	1 cut(s)	1748
BclI	TGATCA	3 cut(s)	598, 1993, 2743
BcnI	CCSGG	2 cut(s)	29, 1889
BcoDI	GTCTC	7 cut(s)	425, 513, 660, 1340, 1747, 2010, 2252
BfaI	CTAG	7 cut(s)	674, 827, 857, 1160, 1235, 1634, 1785
BfmI	CTRYAG	4 cut(s)	341, 1419, 2433, 2713
BfoI	RGCGCY	2 cut(s)	1019, 2295
BfuI	GTATCC	1 cut(s)	1748
BglI	GCCNNNNNGGC	1 cut(s)	277
BlpI	GCTNAGC	2 cut(s)	936, 1100
BmcAI	AGTACT	1 cut(s)	1793
Bme1390I	CCNGG	7 cut(s)	29, 291, 402, 1183, 1350, 1485, 1889
BmeT110I	CYCGRG	1 cut(s)	412
BmgT120I	GGNCC	5 cut(s)	97, 1343, 2439, 2456, 2457
BmiI	GGNNCC	8 cut(s)	321, 579, 1477, 1907, 2064, 2440, 2458, 2564
BmrFI	CCNGG	7 cut(s)	29, 291, 402, 1183, 1350, 1485, 1889
BmrI	ACTGGG	3 cut(s)	998, 2454, 2547
BmsI	GCATC	4 cut(s)	908, 1111, 1465, 1843
BmuI	ACTGGG	3 cut(s)	998, 2454, 2547
BoxI	GACNNNNGTC	1 cut(s)	2715
BpiI	GAAGAC	3 cut(s)	189, 2597, 2627
BplI	GAGNNNNNCTC	4 cut(s)	1607, 1639, 1727, 1759
BpmI	CTGGAG	3 cut(s)	1371, 1895, 2181
Bpu1102I	GCTNAGC	2 cut(s)	936, 1100
Bpu14I	TTCGAA	1 cut(s)	553
BpuMI	CCSGG	2 cut(s)	29, 1889
Bsa29I	ATCGAT	2 cut(s)	1542, 2366
BsaAI	YACGTR	3 cut(s)	1151, 1388, 1811
BsaBI	GATNNNNATC	3 cut(s)	576, 881, 1242
BsaI	GGTCTC	1 cut(s)	513
BsaJI	CCNNGG	4 cut(s)	27, 1181, 1182, 2232
BsaWI	WCCGGW	1 cut(s)	2161
BsaXI	ACNNNNNCTCC	4 cut(s)	173, 203, 510, 540
Bsc4I	CCNNNNNNNGG	7 cut(s)	374, 391, 1355, 1669, 2453, 2465, 2576
Bse118I	RCCGGY	3 cut(s)	68, 357, 2161
Bse1I	ACTGG	8 cut(s)	993, 1125, 1709, 2080, 2198, 2460, 2542, 2560
Bse21I	CCTNAGG	1 cut(s)	2448
Bse3DI	GCAATG	6 cut(s)	260, 266, 809, 1779, 2343, 2538
Bse8I	GATNNNNATC	3 cut(s)	576, 881, 1242
BseBI	CCWGG	5 cut(s)	291, 402, 1183, 1350, 1485
BseCI	ATCGAT	2 cut(s)	1542, 2366
BseDI	CCNNGG	4 cut(s)	27, 1181, 1182, 2232
BseGI	GGATG	6 cut(s)	400, 634, 1126, 2458, 2483, 2698
BseJI	GATNNNNATC	3 cut(s)	576, 881, 1242
BseLI	CCNNNNNNNGG	7 cut(s)	374, 391, 1355, 1669, 2453, 2465, 2576
BseMI	GCAATG	6 cut(s)	260, 266, 809, 1779, 2343, 2538
BseMII	CTCAG	7 cut(s)	177, 420, 671, 927, 1318, 2025, 2279
BseNI	ACTGG	8 cut(s)	993, 1125, 1709, 2080, 2198, 2460, 2542, 2560
BseRI	GAGGAG	1 cut(s)	1707
BseSI	GKGCMC	4 cut(s)	1067, 1704, 2341, 2460
BseXI	GCAGC	8 cut(s)	347, 763, 976, 1123, 1868, 1927, 1982, 2612
BsgI	GTGCAG	2 cut(s)	162, 810
BshFI	GGCC	9 cut(s)	35, 72, 98, 280, 540, 1344, 2310, 2441, 2458
BshNI	GGYRCC	1 cut(s)	1475
BshTI	ACCGGT	1 cut(s)	2161
BshVI	ATCGAT	2 cut(s)	1542, 2366
BsiHKAI	GWGCWC	3 cut(s)	55, 700, 1704
BsiHKCI	CYCGRG	1 cut(s)	412
BsiSI	CCGG	7 cut(s)	29, 69, 82, 358, 1583, 1888, 2162
BslI	CCNNNNNNNGG	7 cut(s)	374, 391, 1355, 1669, 2453, 2465, 2576
BsmAI	GTCTC	7 cut(s)	425, 513, 660, 1340, 1747, 2010, 2252
BsmBI	CGTCTC	2 cut(s)	425, 660
BsmI	GAATGC	1 cut(s)	510
BsnI	GGCC	9 cut(s)	35, 72, 98, 280, 540, 1344, 2310, 2441, 2458
Bso31I	GGTCTC	1 cut(s)	513
BsoBI	CYCGRG	1 cut(s)	412
Bsp119I	TTCGAA	1 cut(s)	553
Bsp120I	GGGCCC	1 cut(s)	2456
Bsp1286I	GDGCHC	6 cut(s)	55, 700, 1067, 1704, 2341, 2460
Bsp1407I	TGTACA	2 cut(s)	752, 1685
Bsp1720I	GCTNAGC	2 cut(s)	936, 1100
Bsp19I	CCATGG	1 cut(s)	2232
BspACI	CCGC	7 cut(s)	32, 179, 272, 281, 946, 2341, 2613
BspANI	GGCC	9 cut(s)	35, 72, 98, 280, 540, 1344, 2310, 2441, 2458
BspCNI	CTCAG	7 cut(s)	178, 421, 670, 928, 1317, 2024, 2278
BspDI	ATCGAT	2 cut(s)	1542, 2366
BspHI	TCATGA	2 cut(s)	442, 2325
BspLI	GGNNCC	8 cut(s)	321, 579, 1477, 1907, 2064, 2440, 2458, 2564
BspMAI	CTGCAG	1 cut(s)	2437
BspQI	GCTCTTC	4 cut(s)	816, 1089, 1866, 2301
BspT104I	TTCGAA	1 cut(s)	553
BspT107I	GGYRCC	1 cut(s)	1475
BspTNI	GGTCTC	1 cut(s)	513
BsrDI	GCAATG	6 cut(s)	260, 266, 809, 1779, 2343, 2538
BsrFI	RCCGGY	3 cut(s)	68, 357, 2161
BsrGI	TGTACA	2 cut(s)	752, 1685
BsrI	ACTGG	8 cut(s)	993, 1125, 1709, 2080, 2198, 2460, 2542, 2560
BssAI	RCCGGY	3 cut(s)	68, 357, 2161
BssECI	CCNNGG	4 cut(s)	27, 1181, 1182, 2232
BssSI	CACGAG	1 cut(s)	2747
BssT1I	CCWWGG	1 cut(s)	2232
Bst2BI	CACGAG	1 cut(s)	2747
Bst2UI	CCWGG	5 cut(s)	291, 402, 1183, 1350, 1485
Bst6I	CTCTTC	5 cut(s)	816, 915, 1089, 1866, 2301
BstAUI	TGTACA	2 cut(s)	752, 1685
BstBAI	YACGTR	3 cut(s)	1151, 1388, 1811
BstBI	TTCGAA	1 cut(s)	553
BstC8I	GCNNGC	5 cut(s)	495, 933, 1342, 1572, 2341
BstDSI	CCRYGG	1 cut(s)	2232
BstEII	GGTNACC	2 cut(s)	64, 1846
BstENI	CCTNNNNNAGG	3 cut(s)	389, 1353, 1667
BstF5I	GGATG	6 cut(s)	400, 634, 1126, 2458, 2483, 2698
BstH2I	RGCGCY	2 cut(s)	1019, 2295
BstHHI	GCGC	3 cut(s)	1018, 1225, 2294
BstMAI	GTCTC	7 cut(s)	425, 513, 660, 1340, 1747, 2010, 2252
BstMWI	GCNNNNNNNGC	9 cut(s)	78, 104, 271, 277, 280, 832, 937, 2228, 2345
BstNI	CCWGG	5 cut(s)	291, 402, 1183, 1350, 1485
BstNSI	RCATGY	4 cut(s)	955, 1574, 1821, 2048
BstPAI	GACNNNNGTC	1 cut(s)	2715
BstPI	GGTNACC	2 cut(s)	64, 1846
BstSCI	CCNGG	7 cut(s)	27, 289, 400, 1181, 1348, 1483, 1887
BstSFI	CTRYAG	4 cut(s)	341, 1419, 2433, 2713
BstSLI	GKGCMC	4 cut(s)	1067, 1704, 2341, 2460
BstV1I	GCAGC	8 cut(s)	347, 763, 976, 1123, 1868, 1927, 1982, 2612
BstV2I	GAAGAC	3 cut(s)	189, 2597, 2627
BstX2I	RGATCY	4 cut(s)	319, 577, 1929, 2562
BstYI	RGATCY	4 cut(s)	319, 577, 1929, 2562
Bsu15I	ATCGAT	2 cut(s)	1542, 2366
Bsu36I	CCTNAGG	1 cut(s)	2448
BsuI	GTATCC	1 cut(s)	1748
BsuRI	GGCC	9 cut(s)	35, 72, 98, 280, 540, 1344, 2310, 2441, 2458
BsuTUI	ATCGAT	2 cut(s)	1542, 2366
BtgI	CCRYGG	1 cut(s)	2232
BtgZI	GCGATG	1 cut(s)	1732
BtsCI	GGATG	6 cut(s)	400, 634, 1126, 2458, 2483, 2698
BtsI	GCAGTG	1 cut(s)	150
BtsIMutI	CAGTG	5 cut(s)	150, 1201, 1702, 2352, 2467
Cac8I	GCNNGC	5 cut(s)	495, 933, 1342, 1572, 2341
CaiI	CAGNNNCTG	2 cut(s)	407, 428
CciI	TCATGA	2 cut(s)	442, 2325
CfoI	GCGC	3 cut(s)	1018, 1225, 2294
Cfr10I	RCCGGY	3 cut(s)	68, 357, 2161
Cfr13I	GGNCC	5 cut(s)	97, 1343, 2439, 2456, 2457
ClaI	ATCGAT	2 cut(s)	1542, 2366
CseI	GACGC	1 cut(s)	131
CsiI	ACCWGGT	1 cut(s)	400
Csp6I	GTAC	7 cut(s)	405, 489, 753, 1496, 1686, 1792, 2472
CspAI	ACCGGT	1 cut(s)	2161
CspCI	CAANNNNNGTGG	4 cut(s)	211, 246, 2011, 2046
CviQI	GTAC	7 cut(s)	405, 489, 753, 1496, 1686, 1792, 2472
DraI	TTTAAA	1 cut(s)	846
DrdI	GACNNNNNNGTC	1 cut(s)	527
DseDI	GACNNNNNNGTC	1 cut(s)	527
EaeI	YGGCCR	1 cut(s)	538
Eam1104I	CTCTTC	5 cut(s)	816, 915, 1089, 1866, 2301
EarI	CTCTTC	5 cut(s)	816, 915, 1089, 1866, 2301
EciI	GGCGGA	1 cut(s)	2628
Ecl136II	GAGCTC	1 cut(s)	53
Eco130I	CCWWGG	1 cut(s)	2232
Eco24I	GRGCYC	2 cut(s)	55, 2460
Eco31I	GGTCTC	1 cut(s)	513
Eco47III	AGCGCT	1 cut(s)	1017
Eco53kI	GAGCTC	1 cut(s)	53
Eco57I	CTGAAG	4 cut(s)	258, 707, 1281, 2622
Eco72I	CACGTG	1 cut(s)	1388
Eco81I	CCTNAGG	1 cut(s)	2448
Eco88I	CYCGRG	1 cut(s)	412
Eco91I	GGTNACC	2 cut(s)	64, 1846
EcoICRI	GAGCTC	1 cut(s)	53
EcoNI	CCTNNNNNAGG	3 cut(s)	389, 1353, 1667
EcoO65I	GGTNACC	2 cut(s)	64, 1846
EcoRII	CCWGG	5 cut(s)	289, 400, 1181, 1348, 1483
EcoT14I	CCWWGG	1 cut(s)	2232
EcoT38I	GRGCYC	2 cut(s)	55, 2460
ErhI	CCWWGG	1 cut(s)	2232
Esp3I	CGTCTC	2 cut(s)	425, 660
FalI	AAGNNNNNCTT	4 cut(s)	1083, 1115, 2280, 2312
FauI	CCCGC	1 cut(s)	2348
FauNDI	CATATG	2 cut(s)	370, 619
FbaI	TGATCA	3 cut(s)	598, 1993, 2743
FokI	GGATG	6 cut(s)	407, 641, 1133, 2465, 2470, 2705
FriOI	GRGCYC	2 cut(s)	55, 2460
FspBI	CTAG	7 cut(s)	674, 827, 857, 1160, 1235, 1634, 1785
GlaI	GCGC	3 cut(s)	1017, 1224, 2293
GsuI	CTGGAG	3 cut(s)	1371, 1895, 2181
HaeII	RGCGCY	2 cut(s)	1019, 2295
HaeIII	GGCC	9 cut(s)	35, 72, 98, 280, 540, 1344, 2310, 2441, 2458
HapII	CCGG	7 cut(s)	29, 69, 82, 358, 1583, 1888, 2162
HgaI	GACGC	1 cut(s)	131
HhaI	GCGC	3 cut(s)	1018, 1225, 2294
Hin6I	GCGC	3 cut(s)	1016, 1223, 2292
HinP1I	GCGC	3 cut(s)	1016, 1223, 2292
HindIII	AAGCTT	1 cut(s)	2414
HinfI	GANTC	8 cut(s)	85, 188, 439, 1708, 2054, 2129, 2194, 2408
HpaII	CCGG	7 cut(s)	29, 69, 82, 358, 1583, 1888, 2162
HphI	GGTGA	8 cut(s)	58, 689, 1589, 1858, 2003, 2048, 2330, 2753
Hpy166II	GTNNAC	2 cut(s)	1702, 2698
Hpy188I	TCNGA	9 cut(s)	50, 121, 687, 1307, 1318, 1539, 2014, 2146, 2721
Hpy8I	GTNNAC	2 cut(s)	1702, 2698
Hpy99I	CGWCG	4 cut(s)	105, 125, 1464, 2608
HpyCH4IV	ACGT	5 cut(s)	841, 1150, 1387, 1650, 1810
HpyF10VI	GCNNNNNNNGC	9 cut(s)	78, 104, 271, 277, 280, 832, 937, 2228, 2345
HpySE526I	ACGT	5 cut(s)	841, 1150, 1387, 1650, 1810
HspAI	GCGC	3 cut(s)	1016, 1223, 2292
Ksp22I	TGATCA	3 cut(s)	598, 1993, 2743
LguI	GCTCTTC	4 cut(s)	816, 1089, 1866, 2301
LmnI	GCTCC	3 cut(s)	122, 1600, 1967
Lsp1109I	GCAGC	8 cut(s)	347, 763, 976, 1123, 1868, 1927, 1982, 2612
LweI	GCATC	4 cut(s)	908, 1111, 1465, 1843
MabI	ACCWGGT	1 cut(s)	400
MaeI	CTAG	7 cut(s)	674, 827, 857, 1160, 1235, 1634, 1785
MaeII	ACGT	5 cut(s)	841, 1150, 1387, 1650, 1810
MaeIII	GTNAC	6 cut(s)	64, 1144, 1846, 2071, 2302, 2545
MfeI	CAATTG	2 cut(s)	1380, 2571
MflI	RGATCY	4 cut(s)	319, 577, 1929, 2562
MhlI	GDGCHC	6 cut(s)	55, 700, 1067, 1704, 2341, 2460
MlyI	GAGTC	2 cut(s)	197, 2188
MmeI	TCCRAC	7 cut(s)	144, 1098, 1276, 1578, 1704, 1736, 2182
MslI	CAYNNNNRTG	2 cut(s)	738, 1575
MspA1I	CMGCKG	2 cut(s)	283, 1114
MspI	CCGG	7 cut(s)	29, 69, 82, 358, 1583, 1888, 2162
MspR9I	CCNGG	7 cut(s)	29, 291, 402, 1183, 1350, 1485, 1889
MunI	CAATTG	2 cut(s)	1380, 2571
Mva1269I	GAATGC	1 cut(s)	510
MvaI	CCWGG	5 cut(s)	291, 402, 1183, 1350, 1485
MwoI	GCNNNNNNNGC	9 cut(s)	78, 104, 271, 277, 280, 832, 937, 2228, 2345
NciI	CCSGG	2 cut(s)	29, 1889
NcoI	CCATGG	1 cut(s)	2232
NdeI	CATATG	2 cut(s)	370, 619
NlaIV	GGNNCC	8 cut(s)	321, 579, 1477, 1907, 2064, 2440, 2458, 2564
NmuCI	GTSAC	3 cut(s)	64, 1846, 2302
NspI	RCATGY	4 cut(s)	955, 1574, 1821, 2048
NspV	TTCGAA	1 cut(s)	553
PaeI	GCATGC	1 cut(s)	1574
PagI	TCATGA	2 cut(s)	442, 2325
PasI	CCCWGGG	1 cut(s)	1182
PciI	ACATGT	2 cut(s)	951, 2044
PciSI	GCTCTTC	4 cut(s)	816, 1089, 1866, 2301
PcsI	WCGNNNNNNNCGW	1 cut(s)	2745
PctI	GAATGC	1 cut(s)	510
PfeI	GAWTC	6 cut(s)	85, 439, 1708, 2054, 2129, 2408
PflMI	CCANNNNNTGG	2 cut(s)	374, 2576
PinAI	ACCGGT	1 cut(s)	2161
PleI	GAGTC	2 cut(s)	196, 2188
PmaCI	CACGTG	1 cut(s)	1388
PmlI	CACGTG	1 cut(s)	1388
PpsI	GAGTC	2 cut(s)	196, 2188
Ppu21I	YACGTR	3 cut(s)	1151, 1388, 1811
PscI	ACATGT	2 cut(s)	951, 2044
PshAI	GACNNNNGTC	1 cut(s)	2715
Psp124BI	GAGCTC	1 cut(s)	55
Psp1406I	AACGTT	1 cut(s)	841
Psp6I	CCWGG	5 cut(s)	289, 400, 1181, 1348, 1483
PspCI	CACGTG	1 cut(s)	1388
PspEI	GGTNACC	2 cut(s)	64, 1846
PspGI	CCWGG	5 cut(s)	289, 400, 1181, 1348, 1483
PspN4I	GGNNCC	8 cut(s)	321, 579, 1477, 1907, 2064, 2440, 2458, 2564
PspOMI	GGGCCC	1 cut(s)	2456
PspPI	GGNCC	5 cut(s)	97, 1343, 2439, 2456, 2457
PstI	CTGCAG	1 cut(s)	2437
PstNI	CAGNNNCTG	2 cut(s)	407, 428
PsuI	RGATCY	4 cut(s)	319, 577, 1929, 2562
PvuII	CAGCTG	1 cut(s)	1114
RsaI	GTAC	7 cut(s)	406, 490, 754, 1497, 1687, 1793, 2473
RsaNI	GTAC	7 cut(s)	405, 489, 753, 1496, 1686, 1792, 2472
RseI	CAYNNNNRTG	2 cut(s)	738, 1575
SacI	GAGCTC	1 cut(s)	55
SapI	GCTCTTC	4 cut(s)	816, 1089, 1866, 2301
Sau96I	GGNCC	5 cut(s)	97, 1343, 2439, 2456, 2457
SbfI	CCTGCAGG	1 cut(s)	2437
ScaI	AGTACT	1 cut(s)	1793
SchI	GAGTC	2 cut(s)	197, 2188
ScrFI	CCNGG	7 cut(s)	29, 291, 402, 1183, 1350, 1485, 1889
SdaI	CCTGCAGG	1 cut(s)	2437
SduI	GDGCHC	6 cut(s)	55, 700, 1067, 1704, 2341, 2460
SexAI	ACCWGGT	1 cut(s)	400
SfaNI	GCATC	4 cut(s)	908, 1111, 1465, 1843
SfcI	CTRYAG	4 cut(s)	341, 1419, 2433, 2713
SfuI	TTCGAA	1 cut(s)	553
SmiMI	CAYNNNNRTG	2 cut(s)	738, 1575
SphI	GCATGC	1 cut(s)	1574
Sse8387I	CCTGCAGG	1 cut(s)	2437
SsiI	CCGC	7 cut(s)	32, 179, 272, 281, 946, 2341, 2613
SspI	AATATT	1 cut(s)	2083
SspMI	CTAG	7 cut(s)	674, 827, 857, 1160, 1235, 1634, 1785
SstI	GAGCTC	1 cut(s)	55
StyD4I	CCNGG	7 cut(s)	27, 289, 400, 1181, 1348, 1483, 1887
StyI	CCWWGG	1 cut(s)	2232
TaiI	ACGT	5 cut(s)	844, 1153, 1390, 1653, 1813
TaqI	TCGA	9 cut(s)	103, 153, 553, 606, 1130, 1411, 1462, 1542, 2366
TaqII	GACCGA	3 cut(s)	52, 537, 1865
TatI	WGTACW	4 cut(s)	752, 1685, 1791, 2471
TauI	GCSGC	4 cut(s)	35, 274, 283, 948
TfiI	GAWTC	6 cut(s)	85, 439, 1708, 2054, 2129, 2408
TscAI	CASTG	5 cut(s)	150, 1201, 1709, 2359, 2467
TseFI	GTSAC	3 cut(s)	64, 1846, 2302
TseI	GCWGC	8 cut(s)	335, 776, 964, 1111, 1856, 1915, 1970, 2600
Tsp45I	GTSAC	3 cut(s)	64, 1846, 2302
TspRI	CASTG	5 cut(s)	150, 1201, 1709, 2359, 2467
Van91I	CCANNNNNTGG	2 cut(s)	374, 2576
VneI	GTGCAC	1 cut(s)	1700
XagI	CCTNNNNNAGG	3 cut(s)	389, 1353, 1667
XapI	RAATTY	3 cut(s)	1136, 1204, 1283
XbaI	TCTAGA	3 cut(s)	1159, 1234, 1633
XceI	RCATGY	4 cut(s)	955, 1574, 1821, 2048
XspI	CTAG	7 cut(s)	674, 827, 857, 1160, 1235, 1634, 1785
ZrmI	AGTACT	1 cut(s)	1793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.