Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001800

Physical Location & Seq

Genomic Coordinates Forward (+)

9450952 .. 9457000

Gene Structure 6049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G26860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2958 bp

ATGAAGGGCTTTGATACTAATCTTCGTCTACAGGCTTCTTCTCCAGAATTCTCCAATGGTTTCTTGCCTAAAAGGCAAAACTTTATAAAACTCAATCGCAGAAATTGTTACCCCAGATCTTCTTTCTCTCCCACCATGTTAAAGCTCTTCACTTCCTCCGCCTCTCGAGTCCACCATTTGACTCCGGTAAGTAGGGTCGTCGGGTCTTCTCCAGTGGAGTCTCCATTGTTCAAAGCGTTGAGTCAAATCACTGGGTGGAATCGGCGATCTACTTCGTTGGGTCATCGTGCTTTCTTCTGCTCTGAGCCTACCAATGGAGAGGCGGCGGCTGAAGCTGAAACTAAGGCGGTGGAGTCCGATTCTGAAGTGTCTGACTCCAAATCTTCGTCTGCGATTGTGCCCACTAACCCTAGGCCTGAAGATTGTTTAACGGTTCTAGCATTGCCGGTGCCACATAGGCCGCTTTTTCCTGGTTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTACTCGCAGCCTTACAAGAGAGCAGAAGACGACAAGCTCCATATGCAGGAGCTTTCCTTCTGAAGGATGACCCATCAGCTGATTCATCTTCAAGCACTGACGCAGAAAAAAACATAAATGAGCTGAAAGGGAAAGAGTTGCTTAACCGGCTTCACGAAGTTGGCACACTTGCTCAGATTTCAAGTATCCAAGGAGACCAAGTTATCCTTGTTGGTCACAGGCGACTTCGCATAAAAGAGATGGTGAGCGAAGAACCACTTACCGTCAAAGTCGATCATCTTAAGGATAATCCGTTTGACATGGACGATGATGTCGTCAAGGCAACATCTTTTGAAGTTATTTCAACTCTTAGGGATGTACTGAAGACAAGTTCACTATGGAGAGATCACGTTCAGACATATACCCAGCATATAGGTGATTTCACTTATCCACGACTAGCTGATTTTGGAGCGGCGATATGTGGCGCAAATAGGCATCAAGCTCAAGAAGTTCTTGAAGAACTGGATGTTCACAAACGTCTGCGGTTGACGCTGGAATTGATGAAAAAAGAAATGGAAATTAGCAAGATACAGGAAACCATAGCAAAAGCAATTGAAGAAAAAATTAGCGGTGAGCAACGTCGTTACTTGCTAAATGAGCAGCTCAAGGCTATAAAGAAGGAGCTTGGTGTGGAGACAGATGACAAATCTGCACTTTCTGCAAAGTTTAAGGAAAGGATTGAGCCTAACAAGGAAAAAATTCCAGCGCATGTATTACAAGTCATAGAAGAAGAGCTTACAAAGCTGCAGCTGTTAGAGGCGAGTTCAAGCGAGTTTAACGTGACGCGTAACTACCTTGATTGGTTGACCATATTGCCTTGGGGAAATTACAGTAATGAAAACTTTGATGTTGCACGGGCGCAAACAATTCTTGACGAGGATCACTATGGCTTATCTGACGTAAAGGAAAGAATACTGGAATTTATTGCAGTGGGAAGACTTAGAGGCACTTCACAAGGGAAAATCATCTGCCTCTCCGGCCCTCCTGGAGTAGGCAAAACTAGTATTGGGCGGTCTATTGCACGTGCTCTTAATCGCAAATTTTTCCGGTTCTCTGTTGGAGGGTTAGCAGATGTCGCTGAGATCAAGGGGCATCGTCGGACATATGTTGGCGCCATGCCAGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGGACAGCAAATCCTCTTGTTCTAATCGATGAGATTGATAAGCTGGGGAGAGGCCATGCTGGTGACCCGGCCAGTGCTTTGTTGGAGCTTCTGGATCCAGAGCAAAACGCAAATTTTCTGGACCACTATCTCGACGTTACTATAGATCTATCAAAGGTTTTATTTGTGTGCACAGCAAATGTGATAGACATGATTCCAAATCCTTTGCTAGACAGAATGGAGGTGATTTCTATTGCTGGGTATATCACTGATGAAAAAGTTCATATCGCAAGAGACTATTTGGAAAAAACTGCACGTGGAGATTGTGGTGTCAAGCCTGAACAGGTTGAGGTGAGTGATGCAGCGCTTCTTTCCTTGATAGAAAATTACTGCAGAGAAGCAGGTGTTAGGAATCTCCAGAAACAGATCGAGAAGATTTACCGTAAGATTGCACTTAAATTAGTGCGTGAAGGAGCAGTCCCCGAAGAGCCTGCAGTTGCAAGTGATCCTGAAGAAGCTGAAATCGTGGCTGATGTTGGCGAATCCATAGAGAATCATACTGTCGAAGAAAACACTGTGTCCTCTGCTGAAGAACCAAAGGAAGAGGCCCAAACCGAGAAGATAGCTATTGAAACGGTTATGATTGATGAGTCAAACCTTGCGGATTATGTAGGAAAACCGGTATTCCATGCAGAGAAGCTCTATGAGCAGACACCGGTAGGTGTTGTGATGGGTCTAGCTTGGACATCAATGGGTGGTTCAACATTGTACATAGAGACGACTGTTGTGGAGGAAGGGGAAGGTAAAGGTGGCCTGAATATAACGGGTCAGCTCGGTGATGTGATGAAAGAAAGTGCACAAATTGCTCACACAGTCGCCAGAAAGATCATGCTAGAGAAAGAACCAGAGAATCAGTTCTTTGCAAACTCCAAGCTTCATCTCCATGTTCCTGCAGGAGCCACTCCCAAGGATGGTCCAAGTGCAGGCTGCACCATGATCACATCTTTACTATCACTTGCCACGAAGAAACCCGTTAGGAAGGACCTTGCAATGACTGGAGAAGTCACACTAACCGGAAGAATTCTTCCTATTGGTGGGGTGAAAGAGAAAACTATAGCGGCGAGGCGGAGTCAGATTAAAACAATAATATTTCCAGAGGCAAACCGGAGAGACTTTGATGAGCTGGCAGAGAATGTGAAAGAAGGGCTTAATGTTCACTTCGTGGATGACTATGGAAAGATCTTCGAGCTTGCCTTTGGCTATGACAAACAAGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004176 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006508 GO:0006515 GO:0006807 GO:0006996 GO:0007005 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0030163 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0051603 GO:0070011 GO:0070013 GO:0071704 GO:0071840 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA LON_substr_bdg Lon_C

Protein Analysis

985

Amino Acids

109.16

Weight (kDa)

5.63

Isoelectric Point (pI)

45.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LON_substr_bdg	PF02190	145 - 352	1.2e-36	ATP-dependent protease La (LON) substrate-binding domain
AAA	PF00004	505 - 642	3.9e-24	ATPase family associated with various cellular activities (AAA)
Lon_lid	PF22667	668 - 717	2.3e-19	Lon protease AAA+ ATPase lid domain
Lon_C	PF05362	774 - 978	2.3e-79	Lon protease (S16) C-terminal proteolytic domain
ChlI	PF13541	826 - 947	1.6e-06	Subunit ChlI of Mg-chelatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001800)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05790 AT3G05790 AT5G26860
fragaria_vesca	FvH4_6g07420 FvH4_7g03300 FvH4_7g03300 FvH4_7g03300
malus_domestica	MD02G1284000.v1.1 MD04G1193200.v1.1 MD07G1050000.v1.1 MD12G1206100.v1.1
prunus_persica	Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.2G038600_v2.0.a1 Prupe.6G313300_v2.0.a1
pyrus_communis	pycom02g24200 pycom04g17100 pycom07g03580 pycom12g19400
rosa_chinensis	RchiOBHm_Chr1g0325611 RchiOBHm_Chr3g0457021
rosa_laevigata	RLG00000025251 RLG00000030117
rosa_multiflora	Rmu_sc0000488.1_g000001
rosa_roxburghii	Rroxscaffold_4G00324580 Rroxscaffold_6G00422260
rosa_rugosa	Rorug01G0053100 Rorug01G0053200 Rorug01G0053200 Rorug03G0018600 Rorug03G0018700
rosa_samantha	Rh1AG068800 Rh1CG069200 Rh1DG073900 Rh3AG078300 Rh3BG080200 Rh3CG080100 Rh3DG081900
rosa_wichuraiana	Rw1G005700 Rw3G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	86
AarI	CACCTGC	1 cut(s)	2069
AasI	GACNNNNNNGTC	1 cut(s)	818
Acc36I	ACCTGC	1 cut(s)	2069
AccB1I	GGYRCC	2 cut(s)	448, 1658
AccBSI	CCGCTC	1 cut(s)	959
AccI	GTMKAC	1 cut(s)	28
AccII	CGCG	1 cut(s)	1333
AclWI	GGATC	6 cut(s)	494, 507, 1434, 1787, 1800, 2177
AcoI	YGGCCR	1 cut(s)	1767
AcsI	RAATTY	6 cut(s)	47, 1245, 1466, 1586, 1810, 2757
AcuI	CTGAAG	7 cut(s)	351, 384, 438, 590, 890, 2208, 2286
AcvI	CACGTG	2 cut(s)	1571, 1994
AcyI	GRCGYC	1 cut(s)	1659
AdeI	CACNNNGTG	2 cut(s)	255, 2899
AfaI	GTAC	3 cut(s)	510, 867, 2447
AfeI	AGCGCT	1 cut(s)	2043
AfiI	CCNNNNNNNGG	7 cut(s)	314, 554, 571, 1538, 2648, 2660, 2771
AflII	CTTAAG	1 cut(s)	788
AflIII	ACRYGT	1 cut(s)	1331
AgeI	ACCGGT	2 cut(s)	2356, 2392
AhlI	ACTAGT	1 cut(s)	1547
AjnI	CCWGG	3 cut(s)	469, 1531, 1666
Alw21I	GWGCWC	3 cut(s)	1576, 1871, 2536
Alw26I	GTCTC	6 cut(s)	225, 696, 1175, 1965, 2447, 2841
Alw44I	GTGCAC	2 cut(s)	1867, 2532
AlwI	GGATC	6 cut(s)	494, 507, 1434, 1787, 1800, 2177
Ama87I	CYCGRG	1 cut(s)	165
Aor51HI	AGCGCT	1 cut(s)	2043
AoxI	GGCC	7 cut(s)	413, 458, 1525, 1750, 1767, 2283, 2488
ApaLI	GTGCAC	2 cut(s)	1867, 2532
ApeKI	GCWGC	6 cut(s)	515, 1147, 1291, 1294, 2039, 2664
ApoI	RAATTY	6 cut(s)	47, 1245, 1466, 1586, 1810, 2757
AsiGI	ACCGGT	2 cut(s)	2356, 2392
Asp700I	GAANNNNTTC	3 cut(s)	1245, 1956, 2591
AspA2I	CCTAGG	1 cut(s)	410
AspLEI	GCGC	5 cut(s)	974, 1255, 1408, 1661, 2044
AspS9I	GGNCC	5 cut(s)	1526, 1819, 2284, 2651, 2719
AsuC2I	CCSGG	1 cut(s)	1766
AsuHPI	GGTGA	8 cut(s)	763, 935, 1130, 1772, 1933, 2041, 2525, 2788
AvaI	CYCGRG	1 cut(s)	165
AvaII	GGWCC	3 cut(s)	1819, 2651, 2719
AvrII	CCTAGG	1 cut(s)	410
BaeGI	GKGCMC	3 cut(s)	402, 1871, 2536
BamHI	GGATCC	2 cut(s)	499, 1792
BanI	GGYRCC	2 cut(s)	448, 1658
BbrPI	CACGTG	2 cut(s)	1571, 1994
BbsI	GAAGAC	4 cut(s)	198, 541, 878, 1489
Bbv12I	GWGCWC	3 cut(s)	1576, 1871, 2536
BbvI	GCAGC	6 cut(s)	527, 1159, 1278, 1306, 2051, 2651
BccI	CCATC	5 cut(s)	589, 742, 1669, 2401, 2642
BcgI	CGANNNNNNTGC	2 cut(s)	2150, 2184
BciT130I	CCWGG	3 cut(s)	471, 1533, 1668
BciVI	GTATCC	1 cut(s)	704
BclI	TGATCA	1 cut(s)	2673
BcnI	CCSGG	1 cut(s)	1766
BcoDI	GTCTC	6 cut(s)	225, 696, 1175, 1965, 2447, 2841
BcuI	ACTAGT	1 cut(s)	1547
BfaI	CTAG	7 cut(s)	411, 437, 944, 1548, 1907, 2414, 2570
BfmI	CTRYAG	7 cut(s)	29, 1292, 1839, 2068, 2169, 2628, 2790
BfoI	RGCGCY	2 cut(s)	1662, 2045
BfrI	CTTAAG	1 cut(s)	788
BfuAI	ACCTGC	1 cut(s)	2069
BfuI	GTATCC	1 cut(s)	704
BglI	GCCNNNNNGGC	3 cut(s)	73, 457, 1524
BglII	AGATCT	3 cut(s)	116, 1843, 2916
BlnI	CCTAGG	1 cut(s)	410
BmcAI	AGTACT	1 cut(s)	510
Bme1390I	CCNGG	4 cut(s)	471, 1533, 1668, 1766
Bme18I	GGWCC	3 cut(s)	1819, 2651, 2719
BmeT110I	CYCGRG	1 cut(s)	165
BmgT120I	GGNCC	5 cut(s)	1526, 1819, 2284, 2651, 2719
BmiI	GGNNCC	5 cut(s)	450, 501, 1660, 1794, 2635
BmrFI	CCNGG	4 cut(s)	471, 1533, 1668, 1766
BmrI	ACTGGG	1 cut(s)	261
BmsI	GCATC	3 cut(s)	991, 1648, 2026
BmuI	ACTGGG	1 cut(s)	261
BpiI	GAAGAC	4 cut(s)	198, 541, 878, 1489
BpmI	CTGGAG	5 cut(s)	27, 195, 1554, 2078, 2754
BpuEI	CTTGAG	2 cut(s)	975, 1136
BpuMI	CCSGG	1 cut(s)	1766
Bsa29I	ATCGAT	1 cut(s)	1725
BsaAI	YACGTR	2 cut(s)	1571, 1994
BsaBI	GATNNNNATC	1 cut(s)	18
BsaHI	GRCGYC	1 cut(s)	1659
BsaI	GGTCTC	1 cut(s)	696
BsaJI	CCNNGG	4 cut(s)	410, 697, 1364, 2643
BsaWI	WCCGGW	6 cut(s)	184, 1593, 2356, 2392, 2750, 2841
BsaXI	ACNNNNNCTCC	2 cut(s)	693, 723
Bsc4I	CCNNNNNNNGG	7 cut(s)	314, 554, 571, 1538, 2648, 2660, 2771
Bse118I	RCCGGY	4 cut(s)	445, 654, 2356, 2392
Bse1I	ACTGG	6 cut(s)	212, 256, 1014, 1467, 1770, 2737
Bse3DI	GCAATG	3 cut(s)	440, 1688, 2733
Bse8I	GATNNNNATC	1 cut(s)	18
BseBI	CCWGG	3 cut(s)	471, 1533, 1668
BseCI	ATCGAT	1 cut(s)	1725
BseDI	CCNNGG	4 cut(s)	410, 697, 1364, 2643
BseGI	GGATG	5 cut(s)	580, 868, 1018, 2653, 2908
BseJI	GATNNNNATC	1 cut(s)	18
BseLI	CCNNNNNNNGG	7 cut(s)	314, 554, 571, 1538, 2648, 2660, 2771
BseMI	GCAATG	3 cut(s)	440, 1688, 2733
BseMII	CTCAG	3 cut(s)	294, 695, 1617
BseNI	ACTGG	6 cut(s)	212, 256, 1014, 1467, 1770, 2737
BseSI	GKGCMC	3 cut(s)	402, 1871, 2536
BseXI	GCAGC	6 cut(s)	527, 1159, 1278, 1306, 2051, 2651
BseYI	CCCAGC	3 cut(s)	912, 1741, 1934
BsgI	GTGCAG	4 cut(s)	1182, 1974, 2650, 2679
Bsh1236I	CGCG	1 cut(s)	1333
BshFI	GGCC	7 cut(s)	415, 460, 1527, 1752, 1769, 2285, 2490
BshNI	GGYRCC	2 cut(s)	448, 1658
BshTI	ACCGGT	2 cut(s)	2356, 2392
BshVI	ATCGAT	1 cut(s)	1725
BsiHKAI	GWGCWC	3 cut(s)	1576, 1871, 2536
BsiHKCI	CYCGRG	1 cut(s)	165
BslFI	GGGAC	2 cut(s)	1714, 2141
BslI	CCNNNNNNNGG	7 cut(s)	314, 554, 571, 1538, 2648, 2660, 2771
BsmAI	GTCTC	6 cut(s)	225, 696, 1175, 1965, 2447, 2841
BsmBI	CGTCTC	1 cut(s)	2447
BsmFI	GGGAC	2 cut(s)	1714, 2141
BsnI	GGCC	7 cut(s)	415, 460, 1527, 1752, 1769, 2285, 2490
Bso31I	GGTCTC	1 cut(s)	696
BsoBI	CYCGRG	1 cut(s)	165
Bsp1286I	GDGCHC	4 cut(s)	402, 1576, 1871, 2536
Bsp1407I	TGTACA	1 cut(s)	2445
BspANI	GGCC	7 cut(s)	415, 460, 1527, 1752, 1769, 2285, 2490
BspCNI	CTCAG	3 cut(s)	295, 694, 1618
BspDI	ATCGAT	1 cut(s)	1725
BspFNI	CGCG	1 cut(s)	1333
BspLI	GGNNCC	5 cut(s)	450, 501, 1660, 1794, 2635
BspMAI	CTGCAG	4 cut(s)	1296, 2072, 2173, 2632
BspMI	ACCTGC	1 cut(s)	2069
BspPI	GGATC	6 cut(s)	494, 507, 1434, 1787, 1800, 2177
BspQI	GCTCTTC	3 cut(s)	152, 1272, 2157
BspT107I	GGYRCC	2 cut(s)	448, 1658
BspTI	CTTAAG	1 cut(s)	788
BspTNI	GGTCTC	1 cut(s)	696
BsrBI	CCGCTC	1 cut(s)	959
BsrDI	GCAATG	3 cut(s)	440, 1688, 2733
BsrFI	RCCGGY	4 cut(s)	445, 654, 2356, 2392
BsrGI	TGTACA	1 cut(s)	2445
BsrI	ACTGG	6 cut(s)	212, 256, 1014, 1467, 1770, 2737
BssAI	RCCGGY	4 cut(s)	445, 654, 2356, 2392
BssECI	CCNNGG	4 cut(s)	410, 697, 1364, 2643
BssNI	GRCGYC	1 cut(s)	1659
BssT1I	CCWWGG	4 cut(s)	410, 697, 1364, 2643
Bst2UI	CCWGG	3 cut(s)	471, 1533, 1668
Bst4CI	ACNGT	9 cut(s)	433, 772, 1379, 2120, 2239, 2254, 2314, 2461, 2551
Bst6I	CTCTTC	4 cut(s)	152, 1272, 2157, 2274
BstACI	GRCGYC	1 cut(s)	1659
BstAFI	CTTAAG	1 cut(s)	788
BstAPI	GCANNNNNTGC	2 cut(s)	1205, 2540
BstAUI	TGTACA	1 cut(s)	2445
BstBAI	YACGTR	2 cut(s)	1571, 1994
BstC8I	GCNNGC	4 cut(s)	2169, 2662, 2862, 2928
BstDEI	CTNAG	6 cut(s)	303, 342, 681, 857, 1487, 1626
BstEII	GGTNACC	1 cut(s)	1760
BstENI	CCTNNNNNAGG	2 cut(s)	569, 1536
BstF5I	GGATG	5 cut(s)	580, 868, 1018, 2653, 2908
BstFNI	CGCG	1 cut(s)	1333
BstH2I	RGCGCY	2 cut(s)	1662, 2045
BstHHI	GCGC	5 cut(s)	974, 1255, 1408, 1661, 2044
BstMAI	GTCTC	6 cut(s)	225, 696, 1175, 1965, 2447, 2841
BstNI	CCWGG	3 cut(s)	471, 1533, 1668
BstNSI	RCATGY	2 cut(s)	484, 1259
BstPI	GGTNACC	1 cut(s)	1760
BstSCI	CCNGG	4 cut(s)	469, 1531, 1666, 1764
BstSFI	CTRYAG	7 cut(s)	29, 1292, 1839, 2068, 2169, 2628, 2790
BstSLI	GKGCMC	3 cut(s)	402, 1871, 2536
BstUI	CGCG	1 cut(s)	1333
BstV1I	GCAGC	6 cut(s)	527, 1159, 1278, 1306, 2051, 2651
BstV2I	GAAGAC	4 cut(s)	198, 541, 878, 1489
BstX2I	RGATCY	5 cut(s)	116, 499, 1792, 1843, 2916
BstYI	RGATCY	5 cut(s)	116, 499, 1792, 1843, 2916
Bsu15I	ATCGAT	1 cut(s)	1725
BsuI	GTATCC	1 cut(s)	704
BsuRI	GGCC	7 cut(s)	415, 460, 1527, 1752, 1769, 2285, 2490
BsuTUI	ATCGAT	1 cut(s)	1725
BtsCI	GGATG	5 cut(s)	580, 868, 1018, 2653, 2908
BtsI	GCAGTG	1 cut(s)	1482
BtsIMutI	CAGTG	7 cut(s)	219, 249, 603, 1482, 1777, 1944, 2250
BveI	ACCTGC	1 cut(s)	2069
Cac8I	GCNNGC	4 cut(s)	2169, 2662, 2862, 2928
CfoI	GCGC	5 cut(s)	974, 1255, 1408, 1661, 2044
Cfr10I	RCCGGY	4 cut(s)	445, 654, 2356, 2392
Cfr13I	GGNCC	5 cut(s)	1526, 1819, 2284, 2651, 2719
ClaI	ATCGAT	1 cut(s)	1725
CseI	GACGC	3 cut(s)	617, 1045, 1339
Csp6I	GTAC	3 cut(s)	509, 866, 2446
CspAI	ACCGGT	2 cut(s)	2356, 2392
CviQI	GTAC	3 cut(s)	509, 866, 2446
DdeI	CTNAG	6 cut(s)	303, 342, 681, 857, 1487, 1626
DinI	GGCGCC	1 cut(s)	1660
DraIII	CACNNNGTG	2 cut(s)	255, 2899
DrdI	GACNNNNNNGTC	1 cut(s)	818
DseDI	GACNNNNNNGTC	1 cut(s)	818
EaeI	YGGCCR	1 cut(s)	1767
Eam1104I	CTCTTC	4 cut(s)	152, 1272, 2157, 2274
EarI	CTCTTC	4 cut(s)	152, 1272, 2157, 2274
EciI	GGCGGA	2 cut(s)	148, 2818
Eco130I	CCWWGG	4 cut(s)	410, 697, 1364, 2643
Eco147I	AGGCCT	1 cut(s)	415
Eco31I	GGTCTC	1 cut(s)	696
Eco47I	GGWCC	3 cut(s)	1819, 2651, 2719
Eco47III	AGCGCT	1 cut(s)	2043
Eco57I	CTGAAG	7 cut(s)	351, 384, 438, 590, 890, 2208, 2286
Eco72I	CACGTG	2 cut(s)	1571, 1994
Eco88I	CYCGRG	1 cut(s)	165
Eco91I	GGTNACC	1 cut(s)	1760
EcoNI	CCTNNNNNAGG	2 cut(s)	569, 1536
EcoO109I	RGGNCCY	1 cut(s)	2719
EcoO65I	GGTNACC	1 cut(s)	1760
EcoRI	GAATTC	2 cut(s)	47, 2757
EcoRII	CCWGG	3 cut(s)	469, 1531, 1666
EcoT14I	CCWWGG	4 cut(s)	410, 697, 1364, 2643
EgeI	GGCGCC	1 cut(s)	1660
EheI	GGCGCC	1 cut(s)	1660
ErhI	CCWWGG	4 cut(s)	410, 697, 1364, 2643
Esp3I	CGTCTC	1 cut(s)	2447
FaqI	GGGAC	2 cut(s)	1714, 2141
FauNDI	CATATG	2 cut(s)	550, 1651
FbaI	TGATCA	1 cut(s)	2673
FblI	GTMKAC	1 cut(s)	28
FokI	GGATG	5 cut(s)	587, 875, 1025, 2660, 2915
FspBI	CTAG	7 cut(s)	411, 437, 944, 1548, 1907, 2414, 2570
GlaI	GCGC	5 cut(s)	973, 1254, 1407, 1660, 2043
GsaI	CCCAGC	3 cut(s)	916, 1745, 1938
GsuI	CTGGAG	5 cut(s)	27, 195, 1554, 2078, 2754
HaeII	RGCGCY	2 cut(s)	1662, 2045
HaeIII	GGCC	7 cut(s)	415, 460, 1527, 1752, 1769, 2285, 2490
HgaI	GACGC	3 cut(s)	617, 1045, 1339
HhaI	GCGC	5 cut(s)	974, 1255, 1408, 1661, 2044
Hin1I	GRCGYC	1 cut(s)	1659
Hin6I	GCGC	5 cut(s)	972, 1253, 1406, 1659, 2042
HinP1I	GCGC	5 cut(s)	972, 1253, 1406, 1659, 2042
HincII	GTYRAC	2 cut(s)	1035, 1353
HindII	GTYRAC	2 cut(s)	1035, 1353
HindIII	AAGCTT	1 cut(s)	2609
HphI	GGTGA	8 cut(s)	763, 935, 1130, 1772, 1933, 2041, 2525, 2788
Hpy166II	GTNNAC	9 cut(s)	29, 172, 881, 1018, 1035, 1353, 1869, 2534, 2893
Hpy8I	GTNNAC	9 cut(s)	29, 172, 881, 1018, 1035, 1353, 1869, 2534, 2893
Hpy99I	CGWCG	4 cut(s)	203, 1131, 1647, 1835
HpyAV	CCTTC	8 cut(s)	565, 575, 1159, 2141, 2465, 2471, 2710, 2873
HpyCH4III	ACNGT	9 cut(s)	433, 772, 1379, 2120, 2239, 2254, 2314, 2461, 2551
HpyCH4IV	ACGT	8 cut(s)	897, 1024, 1126, 1326, 1446, 1570, 1833, 1993
HpyF3I	CTNAG	6 cut(s)	303, 342, 681, 857, 1487, 1626
HpySE526I	ACGT	8 cut(s)	897, 1024, 1126, 1326, 1446, 1570, 1833, 1993
Hsp92I	GRCGYC	1 cut(s)	1659
HspAI	GCGC	5 cut(s)	972, 1253, 1406, 1659, 2042
KasI	GGCGCC	1 cut(s)	1658
Ksp22I	TGATCA	1 cut(s)	2673
LguI	GCTCTTC	3 cut(s)	152, 1272, 2157
LmnI	GCTCC	7 cut(s)	550, 557, 956, 1168, 1783, 2150, 2633
Lsp1109I	GCAGC	6 cut(s)	527, 1159, 1278, 1306, 2051, 2651
LweI	GCATC	3 cut(s)	991, 1648, 2026
MaeI	CTAG	7 cut(s)	411, 437, 944, 1548, 1907, 2414, 2570
MaeII	ACGT	8 cut(s)	897, 1024, 1126, 1326, 1446, 1570, 1833, 1993
MaeIII	GTNAC	8 cut(s)	107, 722, 1130, 1327, 1334, 1760, 1834, 2740
MbiI	CCGCTC	1 cut(s)	959
MfeI	CAATTG	1 cut(s)	1098
MflI	RGATCY	5 cut(s)	116, 499, 1792, 1843, 2916
MhlI	GDGCHC	4 cut(s)	402, 1576, 1871, 2536
MluI	ACGCGT	1 cut(s)	1331
Mly113I	GGCGCC	1 cut(s)	1659
MlyI	GAGTC	8 cut(s)	175, 177, 227, 250, 362, 368, 2336, 2815
MmeI	TCCRAC	3 cut(s)	1585, 1625, 1761
MroXI	GAANNNNTTC	3 cut(s)	1245, 1956, 2591
MslI	CAYNNNNRTG	3 cut(s)	921, 1758, 2619
MspA1I	CMGCKG	2 cut(s)	587, 1297
MspCI	CTTAAG	1 cut(s)	788
MspR9I	CCNGG	4 cut(s)	471, 1533, 1668, 1766
MunI	CAATTG	1 cut(s)	1098
MvaI	CCWGG	3 cut(s)	471, 1533, 1668
MvnI	CGCG	1 cut(s)	1333
NarI	GGCGCC	1 cut(s)	1659
NciI	CCSGG	1 cut(s)	1766
NdeI	CATATG	2 cut(s)	550, 1651
NlaIV	GGNNCC	5 cut(s)	450, 501, 1660, 1794, 2635
NmuCI	GTSAC	4 cut(s)	722, 1327, 1760, 2740
NspI	RCATGY	2 cut(s)	484, 1259
PaeR7I	CTCGAG	1 cut(s)	165
PaqCI	CACCTGC	1 cut(s)	2069
PceI	AGGCCT	1 cut(s)	415
PciSI	GCTCTTC	3 cut(s)	152, 1272, 2157
PcsI	WCGNNNNNNNCGW	1 cut(s)	819
PdmI	GAANNNNTTC	3 cut(s)	1245, 1956, 2591
PfeI	GAWTC	8 cut(s)	259, 359, 590, 1891, 2089, 2219, 2230, 2587
PfoI	TCCNGGA	1 cut(s)	1531
PinAI	ACCGGT	2 cut(s)	2356, 2392
PleI	GAGTC	8 cut(s)	175, 176, 226, 249, 361, 368, 2335, 2814
PluTI	GGCGCC	1 cut(s)	1662
PmaCI	CACGTG	2 cut(s)	1571, 1994
PmlI	CACGTG	2 cut(s)	1571, 1994
PpsI	GAGTC	8 cut(s)	175, 176, 226, 249, 361, 368, 2335, 2814
Ppu21I	YACGTR	2 cut(s)	1571, 1994
PpuMI	RGGWCCY	1 cut(s)	2719
PsiI	TTATAA	1 cut(s)	86
Psp5II	RGGWCCY	1 cut(s)	2719
Psp6I	CCWGG	3 cut(s)	469, 1531, 1666
PspCI	CACGTG	2 cut(s)	1571, 1994
PspEI	GGTNACC	1 cut(s)	1760
PspFI	CCCAGC	3 cut(s)	912, 1741, 1934
PspGI	CCWGG	3 cut(s)	469, 1531, 1666
PspN4I	GGNNCC	5 cut(s)	450, 501, 1660, 1794, 2635
PspPI	GGNCC	5 cut(s)	1526, 1819, 2284, 2651, 2719
PspPPI	RGGWCCY	1 cut(s)	2719
PstI	CTGCAG	4 cut(s)	1296, 2072, 2173, 2632
PsuI	RGATCY	5 cut(s)	116, 499, 1792, 1843, 2916
PvuII	CAGCTG	2 cut(s)	587, 1297
RsaI	GTAC	3 cut(s)	510, 867, 2447
RsaNI	GTAC	3 cut(s)	509, 866, 2446
RseI	CAYNNNNRTG	3 cut(s)	921, 1758, 2619
SapI	GCTCTTC	3 cut(s)	152, 1272, 2157
Sau96I	GGNCC	5 cut(s)	1526, 1819, 2284, 2651, 2719
SbfI	CCTGCAGG	1 cut(s)	2632
ScaI	AGTACT	1 cut(s)	510
SchI	GAGTC	8 cut(s)	175, 177, 227, 250, 362, 368, 2336, 2815
ScrFI	CCNGG	4 cut(s)	471, 1533, 1668, 1766
SdaI	CCTGCAGG	1 cut(s)	2632
SduI	GDGCHC	4 cut(s)	402, 1576, 1871, 2536
SfaNI	GCATC	3 cut(s)	991, 1648, 2026
SfcI	CTRYAG	7 cut(s)	29, 1292, 1839, 2068, 2169, 2628, 2790
SfoI	GGCGCC	1 cut(s)	1660
Sfr274I	CTCGAG	1 cut(s)	165
SinI	GGWCC	3 cut(s)	1819, 2651, 2719
SlaI	CTCGAG	1 cut(s)	165
SmiMI	CAYNNNNRTG	3 cut(s)	921, 1758, 2619
SmlI	CTYRAG	4 cut(s)	165, 788, 990, 1151
SmoI	CTYRAG	4 cut(s)	165, 788, 990, 1151
SpeI	ACTAGT	1 cut(s)	1547
Sse8387I	CCTGCAGG	1 cut(s)	2632
SseBI	AGGCCT	1 cut(s)	415
SspDI	GGCGCC	1 cut(s)	1658
SspI	AATATT	1 cut(s)	2826
SspMI	CTAG	7 cut(s)	411, 437, 944, 1548, 1907, 2414, 2570
StuI	AGGCCT	1 cut(s)	415
StyD4I	CCNGG	4 cut(s)	469, 1531, 1666, 1764
StyI	CCWWGG	4 cut(s)	410, 697, 1364, 2643
TaaI	ACNGT	9 cut(s)	433, 772, 1379, 2120, 2239, 2254, 2314, 2461, 2551
TaiI	ACGT	8 cut(s)	900, 1027, 1129, 1329, 1449, 1573, 1836, 1996
TaqI	TCGA	7 cut(s)	166, 780, 1725, 1830, 2106, 2241, 2922
TatI	WGTACW	3 cut(s)	508, 865, 2445
TauI	GCSGC	5 cut(s)	326, 329, 463, 962, 2798
TfiI	GAWTC	8 cut(s)	259, 359, 590, 1891, 2089, 2219, 2230, 2587
TscAI	CASTG	7 cut(s)	219, 256, 610, 1482, 1777, 1951, 2257
TseFI	GTSAC	4 cut(s)	722, 1327, 1760, 2740
TseI	GCWGC	6 cut(s)	515, 1147, 1291, 1294, 2039, 2664
Tsp45I	GTSAC	4 cut(s)	722, 1327, 1760, 2740
TspDTI	ATGAA	8 cut(s)	17, 582, 1064, 1398, 1949, 1965, 2537, 2603
TspGWI	ACGGA	1 cut(s)	789
TspRI	CASTG	7 cut(s)	219, 256, 610, 1482, 1777, 1951, 2257
Vha464I	CTTAAG	1 cut(s)	788
VneI	GTGCAC	2 cut(s)	1867, 2532
VpaK11BI	GGWCC	3 cut(s)	1819, 2651, 2719
XagI	CCTNNNNNAGG	2 cut(s)	569, 1536
XapI	RAATTY	6 cut(s)	47, 1245, 1466, 1586, 1810, 2757
XceI	RCATGY	2 cut(s)	484, 1259
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1777
XhoI	CTCGAG	1 cut(s)	165
XmaJI	CCTAGG	1 cut(s)	410
XmiI	GTMKAC	1 cut(s)	28
XmnI	GAANNNNTTC	3 cut(s)	1245, 1956, 2591
XspI	CTAG	7 cut(s)	411, 437, 944, 1548, 1907, 2414, 2570
ZrmI	AGTACT	1 cut(s)	510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.