Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Reverse (-)

2827190 .. 2830655

Gene Structure 3466 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G09220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGAGGGAGTTAGGGTTCCTATTGCTTGCGCTCTAATTCTTCTCGCAATCTCTTCCATAACTTCTGCCTCCATTGTGGAACACACCTTCAACGTACAAAACTTAACGGTGTCTAGGCTGTGCAAACGGCAAGTGATAACGGTCGTTAACGGAAGCCTGCCTGGACCAACAATACGCGTCAAGGAGGGTGACTCGCTCGTTATTCACGTTCTAAACCATTCCCCTCACAACATCACAATTCATTGGCATGGGATCTTCCATAAACTAACGGTTTGGGCAGATGGACCGAGTATGATAACGCAGTGCCCAATCCAGCCTGGCCAAAGATACGCTTACAGATTCAACATCACCGGCCAAGAAGGCACCTTGTGGTGGCATGCACACGCGTCTTTCCTACGCGCCACCGTATACGGTGCTCTCGTCATCCGCCCTAAATCTGGTCACTCTTACCCGTTTCCCAAACCTCACAAAGAAGTTCCCATCTTATTTGGTGAATGGTGGAACACCGATGTAGTCGCGTTAGAGGAGGCAGCAATCGCCACCGGAGTTCCTCCAAACAATTCCGACGCTTATACGATCAATGGCCGTCCCGGAAACCTATATCCATGCTCCAAAGACAGAATGTTTAGCCTAAACGTGGTGAAAGGAAAGAGATACTTACTTCGCATCATAAACGCGGCCATGAACATCCAACTGTTTTTCAAGATAGCCAATCACAGACTGACAGTTGTAGCCGCCGACGCAGTCTACACCGCACCTTACGTCACCGACGTCATTGTCATCGCACCGGGCCAAACCATCGACGCCCTTCTCTTCGCCGATCAGTCCGTCGATACCTCCTACTACATGGCAGCTCACCCTTACGCCAGCGCTCCCGCCGTCCCTTTCCCAAACACCACCACCAGAGGCGTCATTCACTATGGCGGCGCGTCGAAAACAGGGCGATCAAAGCCCGTGTTGATGCCGAAACTACCTTCCTTCTTCGACACGTTAACGGCTTACAGATTCTACTCCAACCTCACTGCCTTAGTCAATGGACCTCACTGGGTTCCAGTTCCACGCTACGTGGACGAAGAGATGCTCGTAACCATCGGTCTTGGGCTAGAGGCATGCGCAGATAACACCACGTGTCCAAAATTCTCAGCTTCTATGAGCAATCACTCTTTCGTGTTACCCAAGAAGCTATCGATCTTGGAAGCAGTGTTTCACGACGTTAAAGGGATTTTCACCGCGGATTTTCCAGACCAGCCTCCGGTTAAGTTTGATTACACGAACCCGAACGTAACCCAAACAAACCCGGGACTTTTGTTCACTCAAAAATCAACTAGCGCCAAGATTTTGAAATTCAATACGACGGTGGAGGTAGTGTTACAGAACCATGCGCTTATAGCGGCGGAGAGTCATCCCATGCATCTACATGGATTTAATTTCCATGTATTGGCTCAAGGGTTTGGTAATTATGACCCGAGCCGTGACCGGAGCAAGTTAAATCTCGTTGACCCGCAATCCCGTAACACTTTGGCTGTCCCTGTTGGTGGATGGGCTGTGATCCGTTTCACTGCTAATAATCCAGGTGCGTGGATTTTTCATTGTCATATCGATGTTCACTTACCATTCGGACTAGGGATGATATTTGTGGTTAAGAACGGACCGACCAAGTCGACCACCTTGCCACCGCCACCACCAGATCTTCCCAAATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

567

Amino Acids

62.4

Weight (kDa)

9.08

Isoelectric Point (pI)

37.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	32 - 146	4.5e-42	Multicopper oxidase
Cu-oxidase	PF00394	158 - 310	5.8e-42	Multicopper oxidase
Cu-oxidase_2	PF07731	412 - 550	1.3e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	776
AatII	GACGTC	1 cut(s)	774
Acc16I	TGCGCA	1 cut(s)	1114
AccB1I	GGYRCC	1 cut(s)	362
AccB7I	CCANNNNNTGG	1 cut(s)	1438
AccI	GTMKAC	3 cut(s)	408, 747, 1661
AccII	CGCG	7 cut(s)	177, 386, 399, 518, 677, 929, 1232
AclWI	GGATC	2 cut(s)	260, 1543
AcoI	YGGCCR	4 cut(s)	319, 352, 583, 678
AcsI	RAATTY	2 cut(s)	1136, 1343
AcvI	CACGTG	1 cut(s)	1128
AcyI	GRCGYC	3 cut(s)	771, 804, 909
AdeI	CACNNNGTG	2 cut(s)	369, 1128
AfaI	GTAC	1 cut(s)	96
AfeI	AGCGCT	1 cut(s)	871
AfiI	CCNNNNNNNGG	6 cut(s)	372, 437, 637, 1252, 1438, 1535
AflIII	ACRYGT	4 cut(s)	175, 384, 987, 1127
AgsI	TTSAA	5 cut(s)	91, 343, 703, 1342, 1348
AjnI	CCWGG	3 cut(s)	160, 316, 1570
AloI	GAACNNNNNNTCC	1 cut(s)	32
AluBI	AGCT	3 cut(s)	854, 1145, 1183
AluI	AGCT	3 cut(s)	854, 1145, 1183
Alw21I	GWGCWC	1 cut(s)	418
AlwI	GGATC	2 cut(s)	260, 1543
Ama87I	CYCGRG	2 cut(s)	1297, 1465
Aor51HI	AGCGCT	1 cut(s)	871
AoxI	GGCC	5 cut(s)	319, 352, 583, 678, 790
ApeKI	GCWGC	2 cut(s)	530, 851
ApoI	RAATTY	2 cut(s)	1136, 1343
AspLEI	GCGC	7 cut(s)	32, 401, 872, 929, 1115, 1331, 1384
AspS9I	GGNCC	5 cut(s)	164, 284, 790, 1037, 1649
AsuC2I	CCSGG	4 cut(s)	591, 789, 1298, 1299
AsuHPI	GGTGA	7 cut(s)	200, 340, 503, 652, 757, 848, 1219
AvaI	CYCGRG	2 cut(s)	1297, 1465
AvaII	GGWCC	4 cut(s)	164, 284, 1037, 1649
BaeGI	GKGCMC	1 cut(s)	308
BalI	TGGCCA	1 cut(s)	321
BanI	GGYRCC	1 cut(s)	362
BbrPI	CACGTG	1 cut(s)	1128
Bbv12I	GWGCWC	1 cut(s)	418
BbvI	GCAGC	2 cut(s)	542, 863
BccI	CCATC	5 cut(s)	275, 488, 806, 1097, 1533
BceAI	ACGGC	5 cut(s)	143, 570, 863, 1011, 1455
BcgI	CGANNNNNNTGC	2 cut(s)	1651, 1685
BciT130I	CCWGG	3 cut(s)	162, 318, 1572
BcnI	CCSGG	4 cut(s)	591, 789, 1298, 1299
BfaI	CTAG	4 cut(s)	114, 1103, 1326, 1622
BfoI	RGCGCY	2 cut(s)	873, 1332
BglI	GCCNNNNNGGC	1 cut(s)	360
BglII	AGATCT	1 cut(s)	1687
BisI	GCNGC	6 cut(s)	531, 678, 735, 852, 925, 1392
BlsI	GCNGC	6 cut(s)	532, 679, 736, 853, 926, 1393
Bme1390I	CCNGG	7 cut(s)	162, 318, 591, 789, 1298, 1299, 1572
Bme18I	GGWCC	4 cut(s)	164, 284, 1037, 1649
BmeT110I	CYCGRG	2 cut(s)	1297, 1465
BmgT120I	GGNCC	5 cut(s)	164, 284, 790, 1037, 1649
BmiI	GGNNCC	3 cut(s)	18, 364, 1050
BmrFI	CCNGG	7 cut(s)	162, 318, 591, 789, 1298, 1299, 1572
BmrI	ACTGGG	1 cut(s)	1054
BmsI	GCATC	4 cut(s)	675, 951, 1068, 1420
BmuI	ACTGGG	1 cut(s)	1054
BplI	GAGNNNNNCTC	2 cut(s)	176, 208
BpuEI	CTTGAG	1 cut(s)	1428
BpuMI	CCSGG	4 cut(s)	591, 789, 1298, 1299
Bsa29I	ATCGAT	2 cut(s)	1187, 1599
BsaAI	YACGTR	2 cut(s)	1066, 1128
BsaHI	GRCGYC	3 cut(s)	771, 804, 909
BsaJI	CCNNGG	2 cut(s)	1230, 1297
BsaWI	WCCGGW	3 cut(s)	542, 1252, 1476
BsaXI	ACNNNNNCTCC	3 cut(s)	30, 1352, 1382
Bsc4I	CCNNNNNNNGG	6 cut(s)	372, 437, 637, 1252, 1438, 1535
Bse118I	RCCGGY	1 cut(s)	350
Bse1I	ACTGG	2 cut(s)	1049, 1052
BseBI	CCWGG	3 cut(s)	162, 318, 1572
BseCI	ATCGAT	2 cut(s)	1187, 1599
BseDI	CCNNGG	2 cut(s)	1230, 1297
BseGI	GGATG	5 cut(s)	423, 687, 1402, 1544, 1632
BseLI	CCNNNNNNNGG	6 cut(s)	372, 437, 637, 1252, 1438, 1535
BseMII	CTCAG	1 cut(s)	1155
BseNI	ACTGG	2 cut(s)	1049, 1052
BseRI	GAGGAG	1 cut(s)	539
BseSI	GKGCMC	1 cut(s)	308
BseXI	GCAGC	2 cut(s)	542, 863
Bsh1236I	CGCG	7 cut(s)	177, 386, 399, 518, 677, 929, 1232
Bsh1285I	CGRYCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	321, 354, 585, 680, 792
BshNI	GGYRCC	1 cut(s)	362
BshVI	ATCGAT	2 cut(s)	1187, 1599
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	1 cut(s)	418
BsiHKCI	CYCGRG	2 cut(s)	1297, 1465
BsiSI	CCGG	7 cut(s)	351, 543, 591, 788, 1253, 1298, 1477
BslFI	GGGAC	4 cut(s)	573, 866, 1314, 1511
BslI	CCNNNNNNNGG	6 cut(s)	372, 437, 637, 1252, 1438, 1535
BsmFI	GGGAC	4 cut(s)	573, 866, 1314, 1511
BsnI	GGCC	5 cut(s)	321, 354, 585, 680, 792
BsoBI	CYCGRG	2 cut(s)	1297, 1465
Bsp1286I	GDGCHC	2 cut(s)	308, 418
Bsp143I	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
BspANI	GGCC	5 cut(s)	321, 354, 585, 680, 792
BspCNI	CTCAG	1 cut(s)	1154
BspDI	ATCGAT	2 cut(s)	1187, 1599
BspFNI	CGCG	7 cut(s)	177, 386, 399, 518, 677, 929, 1232
BspLI	GGNNCC	3 cut(s)	18, 364, 1050
BspPI	GGATC	2 cut(s)	260, 1543
BspT107I	GGYRCC	1 cut(s)	362
BsrFI	RCCGGY	1 cut(s)	350
BsrI	ACTGG	2 cut(s)	1049, 1052
BssAI	RCCGGY	1 cut(s)	350
BssECI	CCNNGG	2 cut(s)	1230, 1297
BssMI	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
BssNAI	GTATAC	1 cut(s)	409
BssNI	GRCGYC	3 cut(s)	771, 804, 909
Bst1107I	GTATAC	1 cut(s)	409
Bst2UI	CCWGG	3 cut(s)	162, 318, 1572
Bst4CI	ACNGT	8 cut(s)	109, 142, 271, 406, 413, 696, 727, 1357
Bst6I	CTCTTC	3 cut(s)	58, 818, 1068
BstACI	GRCGYC	3 cut(s)	771, 804, 909
BstBAI	YACGTR	2 cut(s)	1066, 1128
BstC8I	GCNNGC	5 cut(s)	28, 158, 378, 868, 1111
BstDEI	CTNAG	2 cut(s)	1027, 1141
BstDSI	CCRYGG	1 cut(s)	1230
BstF5I	GGATG	5 cut(s)	423, 687, 1402, 1544, 1632
BstFNI	CGCG	7 cut(s)	177, 386, 399, 518, 677, 929, 1232
BstH2I	RGCGCY	2 cut(s)	873, 1332
BstHHI	GCGC	7 cut(s)	32, 401, 872, 929, 1115, 1331, 1384
BstKTI	GATC	7 cut(s)	255, 579, 823, 947, 1191, 1551, 1690
BstMBI	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	5 cut(s)	360, 536, 740, 949, 1388
BstNI	CCWGG	3 cut(s)	162, 318, 1572
BstNSI	RCATGY	2 cut(s)	380, 1113
BstSCI	CCNGG	7 cut(s)	160, 316, 589, 787, 1296, 1297, 1570
BstSLI	GKGCMC	1 cut(s)	308
BstUI	CGCG	7 cut(s)	177, 386, 399, 518, 677, 929, 1232
BstV1I	GCAGC	2 cut(s)	542, 863
BstX2I	RGATCY	2 cut(s)	252, 1687
BstXI	CCANNNNNNTGG	1 cut(s)	1578
BstYI	RGATCY	2 cut(s)	252, 1687
BstZ17I	GTATAC	1 cut(s)	409
Bsu15I	ATCGAT	2 cut(s)	1187, 1599
BsuRI	GGCC	5 cut(s)	321, 354, 585, 680, 792
BsuTUI	ATCGAT	2 cut(s)	1187, 1599
BtgI	CCRYGG	1 cut(s)	1230
BtgZI	GCGATG	1 cut(s)	766
BtsCI	GGATG	5 cut(s)	423, 687, 1402, 1544, 1632
BtsI	GCAGTG	4 cut(s)	308, 1020, 1206, 1557
BtsIMutI	CAGTG	5 cut(s)	308, 1020, 1042, 1206, 1557
Cac8I	GCNNGC	5 cut(s)	28, 158, 378, 868, 1111
CfoI	GCGC	7 cut(s)	32, 401, 872, 929, 1115, 1331, 1384
Cfr10I	RCCGGY	1 cut(s)	350
Cfr13I	GGNCC	5 cut(s)	164, 284, 790, 1037, 1649
Cfr42I	CCGCGG	1 cut(s)	1233
Cfr9I	CCCGGG	1 cut(s)	1297
ClaI	ATCGAT	2 cut(s)	1187, 1599
CpoI	CGGWCCG	1 cut(s)	1649
CseI	GACGC	7 cut(s)	166, 375, 575, 749, 812, 898, 918
Csp6I	GTAC	1 cut(s)	95
CspI	CGGWCCG	1 cut(s)	1649
CviQI	GTAC	1 cut(s)	95
DdeI	CTNAG	2 cut(s)	1027, 1141
DpnI	GATC	7 cut(s)	254, 578, 822, 946, 1190, 1550, 1689
DpnII	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
DraIII	CACNNNGTG	2 cut(s)	369, 1128
DrdI	GACNNNNNNGTC	1 cut(s)	776
DseDI	GACNNNNNNGTC	1 cut(s)	776
EaeI	YGGCCR	4 cut(s)	319, 352, 583, 678
Eam1104I	CTCTTC	3 cut(s)	58, 818, 1068
EarI	CTCTTC	3 cut(s)	58, 818, 1068
EciI	GGCGGA	2 cut(s)	416, 1409
Eco47I	GGWCC	4 cut(s)	164, 284, 1037, 1649
Eco47III	AGCGCT	1 cut(s)	871
Eco72I	CACGTG	1 cut(s)	1128
Eco88I	CYCGRG	2 cut(s)	1297, 1465
EcoRII	CCWGG	3 cut(s)	160, 316, 1570
EcoT22I	ATGCAT	1 cut(s)	1413
FalI	AAGNNNNNCTT	4 cut(s)	316, 348, 641, 673
FaqI	GGGAC	4 cut(s)	573, 866, 1314, 1511
FauI	CCCGC	2 cut(s)	883, 1509
FblI	GTMKAC	3 cut(s)	408, 747, 1661
Fnu4HI	GCNGC	6 cut(s)	531, 678, 735, 852, 925, 1392
FokI	GGATG	5 cut(s)	410, 674, 1389, 1551, 1639
Fsp4HI	GCNGC	6 cut(s)	531, 678, 735, 852, 925, 1392
FspBI	CTAG	4 cut(s)	114, 1103, 1326, 1622
FspI	TGCGCA	1 cut(s)	1114
GlaI	GCGC	7 cut(s)	31, 400, 871, 928, 1114, 1330, 1383
GluI	GCNGC	6 cut(s)	531, 678, 735, 852, 925, 1392
HaeII	RGCGCY	2 cut(s)	873, 1332
HaeIII	GGCC	5 cut(s)	321, 354, 585, 680, 792
HapII	CCGG	7 cut(s)	351, 543, 591, 788, 1253, 1298, 1477
HgaI	GACGC	7 cut(s)	166, 375, 575, 749, 812, 898, 918
HhaI	GCGC	7 cut(s)	32, 401, 872, 929, 1115, 1331, 1384
Hin1I	GRCGYC	3 cut(s)	771, 804, 909
Hin6I	GCGC	7 cut(s)	30, 399, 870, 927, 1113, 1329, 1382
HinP1I	GCGC	7 cut(s)	30, 399, 870, 927, 1113, 1329, 1382
HincII	GTYRAC	4 cut(s)	148, 993, 1498, 1662
HindII	GTYRAC	4 cut(s)	148, 993, 1498, 1662
HinfI	GANTC	4 cut(s)	191, 339, 1005, 1399
HpaI	GTTAAC	2 cut(s)	148, 993
HpaII	CCGG	7 cut(s)	351, 543, 591, 788, 1253, 1298, 1477
HphI	GGTGA	7 cut(s)	200, 340, 503, 652, 757, 848, 1219
Hpy166II	GTNNAC	9 cut(s)	148, 409, 748, 993, 1069, 1311, 1498, 1606, 1662
Hpy188I	TCNGA	2 cut(s)	565, 1619
Hpy188III	TCNNGA	3 cut(s)	703, 1208, 1241
Hpy8I	GTNNAC	9 cut(s)	148, 409, 748, 993, 1069, 1311, 1498, 1606, 1662
Hpy99I	CGWCG	8 cut(s)	569, 743, 773, 806, 833, 934, 1214, 1357
HpyAV	CCTTC	5 cut(s)	97, 353, 818, 984, 988
HpyCH4III	ACNGT	8 cut(s)	109, 142, 271, 406, 413, 696, 727, 1357
HpyCH4V	TGCA	3 cut(s)	123, 380, 1411
HpyF10VI	GCNNNNNNNGC	5 cut(s)	360, 536, 740, 949, 1388
HpyF3I	CTNAG	2 cut(s)	1027, 1141
Hsp92I	GRCGYC	3 cut(s)	771, 804, 909
HspAI	GCGC	7 cut(s)	30, 399, 870, 927, 1113, 1329, 1382
KspAI	GTTAAC	2 cut(s)	148, 993
KspI	CCGCGG	1 cut(s)	1233
Kzo9I	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
LmnI	GCTCC	3 cut(s)	614, 877, 1479
Lsp1109I	GCAGC	2 cut(s)	542, 863
LweI	GCATC	4 cut(s)	675, 951, 1068, 1420
MaeI	CTAG	4 cut(s)	114, 1103, 1326, 1622
MaeIII	GTNAC	9 cut(s)	188, 440, 763, 1084, 1170, 1282, 1368, 1472, 1511
MalI	GATC	7 cut(s)	254, 578, 822, 946, 1190, 1550, 1689
MboI	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
MboII	GAAGA	7 cut(s)	32, 45, 247, 805, 973, 1085, 1682
MflI	RGATCY	2 cut(s)	252, 1687
MhlI	GDGCHC	2 cut(s)	308, 418
MlsI	TGGCCA	1 cut(s)	321
MluCI	AATT	7 cut(s)	36, 237, 559, 1136, 1343, 1426, 1456
MluI	ACGCGT	2 cut(s)	175, 384
MluNI	TGGCCA	1 cut(s)	321
MlyI	GAGTC	2 cut(s)	185, 1408
MmeI	TCCRAC	3 cut(s)	588, 715, 1038
Mox20I	TGGCCA	1 cut(s)	321
Mph1103I	ATGCAT	1 cut(s)	1413
MscI	TGGCCA	1 cut(s)	321
MseI	TTAA	9 cut(s)	104, 147, 992, 1215, 1257, 1425, 1487, 1641, 1702
MslI	CAYNNNNRTG	3 cut(s)	246, 1416, 1599
Msp20I	TGGCCA	1 cut(s)	321
MspA1I	CMGCKG	1 cut(s)	1232
MspI	CCGG	7 cut(s)	351, 543, 591, 788, 1253, 1298, 1477
MspR9I	CCNGG	7 cut(s)	162, 318, 591, 789, 1298, 1299, 1572
MvaI	CCWGG	3 cut(s)	162, 318, 1572
MvnI	CGCG	7 cut(s)	177, 386, 399, 518, 677, 929, 1232
MwoI	GCNNNNNNNGC	5 cut(s)	360, 536, 740, 949, 1388
NciI	CCSGG	4 cut(s)	591, 789, 1298, 1299
NdeII	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
NlaIV	GGNNCC	3 cut(s)	18, 364, 1050
NmuCI	GTSAC	4 cut(s)	188, 440, 763, 1472
NsbI	TGCGCA	1 cut(s)	1114
NsiI	ATGCAT	1 cut(s)	1413
NspI	RCATGY	2 cut(s)	380, 1113
PaeI	GCATGC	2 cut(s)	380, 1113
PcsI	WCGNNNNNNNCGW	3 cut(s)	204, 417, 768
PfeI	GAWTC	2 cut(s)	339, 1005
PflFI	GACNNNGTC	2 cut(s)	743, 1657
PflMI	CCANNNNNTGG	1 cut(s)	1438
PfoI	TCCNGGA	1 cut(s)	589
PkrI	GCNGC	6 cut(s)	532, 679, 736, 853, 926, 1393
PleI	GAGTC	2 cut(s)	185, 1407
PmaCI	CACGTG	1 cut(s)	1128
PmlI	CACGTG	1 cut(s)	1128
PpsI	GAGTC	2 cut(s)	185, 1407
Ppu21I	YACGTR	2 cut(s)	1066, 1128
Psp6I	CCWGG	3 cut(s)	160, 316, 1570
PspCI	CACGTG	1 cut(s)	1128
PspGI	CCWGG	3 cut(s)	160, 316, 1570
PspN4I	GGNNCC	3 cut(s)	18, 364, 1050
PspPI	GGNCC	5 cut(s)	164, 284, 790, 1037, 1649
PsuI	RGATCY	2 cut(s)	252, 1687
PsyI	GACNNNGTC	2 cut(s)	743, 1657
RsaI	GTAC	1 cut(s)	96
RsaNI	GTAC	1 cut(s)	95
RseI	CAYNNNNRTG	3 cut(s)	246, 1416, 1599
Rsr2I	CGGWCCG	1 cut(s)	1649
RsrII	CGGWCCG	1 cut(s)	1649
SacII	CCGCGG	1 cut(s)	1233
SalI	GTCGAC	1 cut(s)	1660
SaqAI	TTAA	9 cut(s)	104, 147, 992, 1215, 1257, 1425, 1487, 1641, 1702
SatI	GCNGC	6 cut(s)	531, 678, 735, 852, 925, 1392
Sau3AI	GATC	7 cut(s)	252, 576, 820, 944, 1188, 1548, 1687
Sau96I	GGNCC	5 cut(s)	164, 284, 790, 1037, 1649
SchI	GAGTC	2 cut(s)	185, 1408
ScrFI	CCNGG	7 cut(s)	162, 318, 591, 789, 1298, 1299, 1572
SduI	GDGCHC	2 cut(s)	308, 418
SfaNI	GCATC	4 cut(s)	675, 951, 1068, 1420
Sfr303I	CCGCGG	1 cut(s)	1233
SgrBI	CCGCGG	1 cut(s)	1233
SinI	GGWCC	4 cut(s)	164, 284, 1037, 1649
SmaI	CCCGGG	1 cut(s)	1299
SmiMI	CAYNNNNRTG	3 cut(s)	246, 1416, 1599
SmlI	CTYRAG	1 cut(s)	1443
SmoI	CTYRAG	1 cut(s)	1443
SphI	GCATGC	2 cut(s)	380, 1113
Sse9I	AATT	7 cut(s)	36, 237, 559, 1136, 1343, 1426, 1456
SspMI	CTAG	4 cut(s)	114, 1103, 1326, 1622
StyD4I	CCNGG	7 cut(s)	160, 316, 589, 787, 1296, 1297, 1570
TaaI	ACNGT	8 cut(s)	109, 142, 271, 406, 413, 696, 727, 1357
TaqI	TCGA	7 cut(s)	801, 831, 932, 984, 1187, 1599, 1661
TaqII	GACCGA	3 cut(s)	301, 1082, 1666
TasI	AATT	7 cut(s)	36, 237, 559, 1136, 1343, 1426, 1456
TauI	GCSGC	4 cut(s)	680, 737, 927, 1394
TfiI	GAWTC	2 cut(s)	339, 1005
Tru1I	TTAA	9 cut(s)	104, 147, 992, 1215, 1257, 1425, 1487, 1641, 1702
Tru9I	TTAA	9 cut(s)	104, 147, 992, 1215, 1257, 1425, 1487, 1641, 1702
TscAI	CASTG	5 cut(s)	308, 1027, 1049, 1206, 1564
TseFI	GTSAC	4 cut(s)	188, 440, 763, 1472
TseI	GCWGC	2 cut(s)	530, 851
Tsp45I	GTSAC	4 cut(s)	188, 440, 763, 1472
TspDTI	ATGAA	3 cut(s)	230, 698, 1577
TspGWI	ACGGA	4 cut(s)	165, 817, 1541, 1662
TspMI	CCCGGG	1 cut(s)	1297
TspRI	CASTG	5 cut(s)	308, 1027, 1049, 1206, 1564
Tth111I	GACNNNGTC	2 cut(s)	743, 1657
Van91I	CCANNNNNTGG	1 cut(s)	1438
VpaK11BI	GGWCC	4 cut(s)	164, 284, 1037, 1649
XapI	RAATTY	2 cut(s)	1136, 1343
XceI	RCATGY	2 cut(s)	380, 1113
XmaI	CCCGGG	1 cut(s)	1297
XmiI	GTMKAC	3 cut(s)	408, 747, 1661
XspI	CTAG	4 cut(s)	114, 1103, 1326, 1622
ZraI	GACGTC	1 cut(s)	772
Zsp2I	ATGCAT	1 cut(s)	1413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.