Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Forward (+)

15968930 .. 15986385

Gene Structure 17456 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g12950.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGCACGCTTAGCCTTTGTGCTAGCTTGTGCTCTAGCCCTATTGGCTTCCTCAGTAGCCTCTGGTGCAATTGTTGAGCATTCTTTTAATGTGAACAACCTAACTGTTAGCCGACTGTGCCGGAATCAATCGATTACTGTAGTAAATGAGAGTTATCCAGGACCAACCATATATGCACGAGATGGAGACACACTTATCGTCCACGTTTTAAACCAGTCTCCCTATAACATTAGTATTCACTGGCATGGAATCTTTCAACTTCTGAGTCCATGGGCGGATGGGCCTACATATGTAACTCAATGCCCTATACGCCCCGGACAAAGTTATACTTACAAATTTAATATCACTGGACAAGAAGGCACCCTTTGGTGGCATGCCCACATTTCGTGGCTCCGTGCAACTGTCCACGGAGCGCTCATAATCCACCCGAAAGCCGGTCGATCCTTCCCCTTCCCCAAGCCCGCCAAAGAAGTTCCCATCTTGTTAGGAGAGTGGTACAATGGCAATGTGGTCGACATTGAGGAAGAAGGCCTATCTAAAGGAATTGCTCCTAACATTTCAAATGCTTACACCATCAATGGACTTCCCGGTGATCTTTATGACTGCTCTCAAAATCCAAAAACATATCAGCTCAGTGTGGTGGGAGGAAAGACTTACCTGCTACGCCTAATCAACGCTGCACTCAATACCGAGCTCTTCTTCAAGATAGCCAATCACAGCATGACAGTTGTTGCCATTGACGCCTCTTACACGACTCCTTATGTCACAGACGTGGTGGTTATTGCACCCGGTCAGACCACCGATGTTCTCGTCAAATTCAATCAACTTAACGGATCTTATTACATGGCAGCCACTCCTTACGCTAGCGCTGATGCTACCGCCGTTGGCTTTGATAACTCGACAACTAGAGGCATCATCGTCTACAAGGGCTACACGTCATCAACCCCTATTATGCCCTCTATGCCCAACCCTAGCGACACGCTGTTGGCGAACAAGTTCTTCACCAATCTCACCGGCTTCCCTGGTGGGCCTCACTGGGTCCCAGTCCCACGTGAGGTGGACGAGCACATGTTCGTGACAGTTGGCGTTCACTTAGCGATGTGTCCCGAAAATGCCACGTGTCAAGCCATATTTAATAGCCGATTATCTGCAAGCATGAATAACGAGTCATTCGTGACCCCGACCAATATGTCCATGCTGGAAGTACATTTTAACAACGTGAGCGGGGTCTACACCAGAGATTTTCCCAACGAGCCTCCGGTCAAGTTTGACTACACGGACACGAACCTTAGCCTCGACCTATCCCTAATATTCGCGCCAAAATCAACCAAGGTCAAGACGCTAAAGTTCAATTCGACAGTACAATTAGTGTATCAGAACACAACGTTTTTGGCCATCGAGAACCACCCGATGCATATCCACGGCTTCAATTTCCACGTATTGGCACAAGGGTTTGGAAATTATGATCCGATTAATGACCCCAAAAAATTTAACTTCGTTAATCCGCAAGTACGTAACACAATTGGTGTGCCGGTCGGAGGATGGGCTGTGATCAGGTTTCGAGCAAATAATCCTAGTATCTGGTACGTGCATTATCACTTGGACGTTCATCTGCCTTGGGGGCTGGCCATGGCTTTTGAGGTTGAAAATGGAGGGACGCCAGAATCTACTTTGCCTCCACCACCACCTGATCTGCCCAAATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

569

Amino Acids

62.63

Weight (kDa)

6.36

Isoelectric Point (pI)

35.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1189
Acc36I	ACCTGC	1 cut(s)	666
AccB1I	GGYRCC	1 cut(s)	359
AccB7I	CCANNNNNTGG	1 cut(s)	1441
AccBSI	CCGCTC	1 cut(s)	1224
AccI	GTMKAC	3 cut(s)	513, 921, 1230
AccII	CGCG	1 cut(s)	1316
AciI	CCGC	5 cut(s)	275, 462, 879, 1224, 1505
AclI	AACGTT	1 cut(s)	1385
AclWI	GGATC	3 cut(s)	435, 841, 1460
AcoI	YGGCCR	2 cut(s)	1392, 1626
AcsI	RAATTY	3 cut(s)	335, 815, 1487
AcvI	CACGTG	2 cut(s)	1052, 1119
AcyI	GRCGYC	2 cut(s)	741, 1658
AfaI	GTAC	5 cut(s)	497, 1206, 1362, 1512, 1586
AfeI	AGCGCT	2 cut(s)	414, 868
AfiI	CCNNNNNNNGG	5 cut(s)	369, 434, 1054, 1441, 1538
AflIII	ACRYGT	3 cut(s)	933, 1068, 1118
AgsI	TTSAA	7 cut(s)	257, 561, 703, 820, 1351, 1429, 1646
AjiI	CACGTC	2 cut(s)	772, 936
AjnI	CCWGG	2 cut(s)	157, 1021
AleI	CACNNNNGTG	1 cut(s)	770
AluBI	AGCT	3 cut(s)	26, 631, 694
AluI	AGCT	3 cut(s)	26, 631, 694
Alw21I	GWGCWC	3 cut(s)	34, 696, 1068
Alw26I	GTCTC	2 cut(s)	180, 222
AlwI	GGATC	3 cut(s)	435, 841, 1460
Aor51HI	AGCGCT	2 cut(s)	414, 868
AoxI	GGCC	5 cut(s)	281, 529, 1028, 1392, 1626
ApeKI	GCWGC	2 cut(s)	677, 848
ApoI	RAATTY	3 cut(s)	335, 815, 1487
AseI	ATTAAT	1 cut(s)	1473
Asp700I	GAANNNNTTC	1 cut(s)	995
AspLEI	GCGC	3 cut(s)	415, 869, 1318
AspS9I	GGNCC	4 cut(s)	161, 281, 1028, 1039
AsuC2I	CCSGG	3 cut(s)	315, 588, 789
AsuHPI	GGTGA	3 cut(s)	602, 994, 1003
AsuNHI	GCTAGC	2 cut(s)	22, 863
AvaII	GGWCC	2 cut(s)	161, 1039
BalI	TGGCCA	2 cut(s)	1394, 1628
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	1 cut(s)	696
BauI	CACGAG	1 cut(s)	177
BbrPI	CACGTG	2 cut(s)	1052, 1119
Bbv12I	GWGCWC	3 cut(s)	34, 696, 1068
BbvI	GCAGC	2 cut(s)	664, 860
BccI	CCATC	6 cut(s)	176, 272, 485, 581, 1403, 1536
BceAI	ACGGC	2 cut(s)	866, 1438
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	2 cut(s)	159, 1023
BclI	TGATCA	1 cut(s)	1551
BcnI	CCSGG	3 cut(s)	315, 588, 789
BcoDI	GTCTC	2 cut(s)	180, 222
BfaI	CTAG	6 cut(s)	23, 35, 864, 906, 972, 1575
BfmI	CTRYAG	1 cut(s)	138
BfoI	RGCGCY	2 cut(s)	416, 870
BfuAI	ACCTGC	1 cut(s)	666
BglI	GCCNNNNNGGC	2 cut(s)	44, 1621
BisI	GCNGC	2 cut(s)	678, 849
BlpI	GCTNAGC	1 cut(s)	10
BlsI	GCNGC	2 cut(s)	679, 850
Bme1390I	CCNGG	5 cut(s)	159, 315, 588, 789, 1023
Bme18I	GGWCC	2 cut(s)	161, 1039
BmgBI	CACGTC	2 cut(s)	772, 936
BmgT120I	GGNCC	4 cut(s)	161, 281, 1028, 1039
BmiI	GGNNCC	4 cut(s)	361, 392, 1040, 1041
BmrFI	CCNGG	5 cut(s)	159, 315, 588, 789, 1023
BmrI	ACTGGG	2 cut(s)	1037, 1045
BmsI	GCATC	3 cut(s)	862, 921, 1401
BmtI	GCTAGC	2 cut(s)	26, 867
BmuI	ACTGGG	2 cut(s)	1037, 1045
Bpu10I	CCTNAGC	1 cut(s)	1289
Bpu1102I	GCTNAGC	1 cut(s)	10
BpuMI	CCSGG	3 cut(s)	315, 588, 789
Bsa29I	ATCGAT	1 cut(s)	131
BsaAI	YACGTR	5 cut(s)	1052, 1119, 1438, 1514, 1588
BsaBI	GATNNNNATC	1 cut(s)	1415
BsaHI	GRCGYC	2 cut(s)	741, 1658
BsaJI	CCNNGG	8 cut(s)	269, 313, 406, 1021, 1329, 1420, 1616, 1629
BsaWI	WCCGGW	1 cut(s)	1258
BsaXI	ACNNNNNCTCC	2 cut(s)	1660, 1690
Bsc4I	CCNNNNNNNGG	5 cut(s)	369, 434, 1054, 1441, 1538
Bse118I	RCCGGY	3 cut(s)	434, 1013, 1531
Bse1I	ACTGG	5 cut(s)	214, 245, 352, 1040, 1043
Bse3DI	GCAATG	1 cut(s)	511
Bse8I	GATNNNNATC	1 cut(s)	1415
BseBI	CCWGG	2 cut(s)	159, 1023
BseCI	ATCGAT	1 cut(s)	131
BseDI	CCNNGG	8 cut(s)	269, 313, 406, 1021, 1329, 1420, 1616, 1629
BseGI	GGATG	2 cut(s)	283, 1547
BseJI	GATNNNNATC	1 cut(s)	1415
BseLI	CCNNNNNNNGG	5 cut(s)	369, 434, 1054, 1441, 1538
BseMI	GCAATG	1 cut(s)	511
BseMII	CTCAG	3 cut(s)	66, 254, 646
BseNI	ACTGG	5 cut(s)	214, 245, 352, 1040, 1043
BseXI	GCAGC	2 cut(s)	664, 860
BsgI	GTGCAG	1 cut(s)	663
Bsh1236I	CGCG	1 cut(s)	1316
Bsh1285I	CGRYCG	2 cut(s)	439, 1536
BshFI	GGCC	5 cut(s)	283, 531, 1030, 1394, 1628
BshNI	GGYRCC	1 cut(s)	359
BshVI	ATCGAT	1 cut(s)	131
BsiEI	CGRYCG	2 cut(s)	439, 1536
BsiHKAI	GWGCWC	3 cut(s)	34, 696, 1068
BsiSI	CCGG	8 cut(s)	121, 315, 435, 588, 789, 1014, 1259, 1532
BslFI	GGGAC	4 cut(s)	1025, 1031, 1089, 1669
BslI	CCNNNNNNNGG	5 cut(s)	369, 434, 1054, 1441, 1538
BsmAI	GTCTC	2 cut(s)	180, 222
BsmFI	GGGAC	4 cut(s)	1025, 1031, 1089, 1669
BsmI	GAATGC	1 cut(s)	79
BsnI	GGCC	5 cut(s)	283, 531, 1030, 1394, 1628
Bsp1286I	GDGCHC	3 cut(s)	34, 696, 1068
Bsp143I	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
Bsp1720I	GCTNAGC	1 cut(s)	10
Bsp19I	CCATGG	2 cut(s)	269, 1629
BspACI	CCGC	5 cut(s)	275, 462, 879, 1224, 1505
BspANI	GGCC	5 cut(s)	283, 531, 1030, 1394, 1628
BspCNI	CTCAG	3 cut(s)	65, 255, 645
BspDI	ATCGAT	1 cut(s)	131
BspFNI	CGCG	1 cut(s)	1316
BspLI	GGNNCC	4 cut(s)	361, 392, 1040, 1041
BspMI	ACCTGC	1 cut(s)	666
BspOI	GCTAGC	2 cut(s)	26, 867
BspPI	GGATC	3 cut(s)	435, 841, 1460
BspQI	GCTCTTC	1 cut(s)	701
BspT107I	GGYRCC	1 cut(s)	359
BsrBI	CCGCTC	1 cut(s)	1224
BsrDI	GCAATG	1 cut(s)	511
BsrFI	RCCGGY	3 cut(s)	434, 1013, 1531
BsrI	ACTGG	5 cut(s)	214, 245, 352, 1040, 1043
BssAI	RCCGGY	3 cut(s)	434, 1013, 1531
BssECI	CCNNGG	8 cut(s)	269, 313, 406, 1021, 1329, 1420, 1616, 1629
BssMI	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
BssNI	GRCGYC	2 cut(s)	741, 1658
BssSI	CACGAG	1 cut(s)	177
BssT1I	CCWWGG	4 cut(s)	269, 1329, 1616, 1629
Bst2BI	CACGAG	1 cut(s)	177
Bst2UI	CCWGG	2 cut(s)	159, 1023
Bst4CI	ACNGT	7 cut(s)	106, 117, 139, 403, 727, 1081, 1360
Bst6I	CTCTTC	1 cut(s)	701
BstACI	GRCGYC	2 cut(s)	741, 1658
BstBAI	YACGTR	5 cut(s)	1052, 1119, 1438, 1514, 1588
BstC8I	GCNNGC	7 cut(s)	7, 24, 375, 462, 865, 1153, 1626
BstDEI	CTNAG	6 cut(s)	10, 52, 263, 632, 1093, 1289
BstDSI	CCRYGG	4 cut(s)	269, 406, 1420, 1629
BstF5I	GGATG	2 cut(s)	283, 1547
BstFNI	CGCG	1 cut(s)	1316
BstH2I	RGCGCY	2 cut(s)	416, 870
BstHHI	GCGC	3 cut(s)	415, 869, 1318
BstKTI	GATC	6 cut(s)	443, 595, 836, 1468, 1554, 1693
BstMAI	GTCTC	2 cut(s)	180, 222
BstMBI	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
BstMCI	CGRYCG	2 cut(s)	439, 1536
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 44, 65, 117, 309, 740, 961, 1621
BstNI	CCWGG	2 cut(s)	159, 1023
BstNSI	RCATGY	2 cut(s)	377, 1072
BstSCI	CCNGG	5 cut(s)	157, 313, 586, 787, 1021
BstSFI	CTRYAG	1 cut(s)	138
BstSNI	TACGTA	1 cut(s)	1514
BstUI	CGCG	1 cut(s)	1316
BstV1I	GCAGC	2 cut(s)	664, 860
BstX2I	RGATCY	1 cut(s)	833
BstYI	RGATCY	1 cut(s)	833
Bsu15I	ATCGAT	1 cut(s)	131
BsuRI	GGCC	5 cut(s)	283, 531, 1030, 1394, 1628
BsuTUI	ATCGAT	1 cut(s)	131
BtgI	CCRYGG	4 cut(s)	269, 406, 1420, 1629
BtgZI	GCGATG	1 cut(s)	1112
BtrI	CACGTC	2 cut(s)	772, 936
BtsCI	GGATG	2 cut(s)	283, 1547
BtsIMutI	CAGTG	4 cut(s)	238, 345, 640, 1033
BveI	ACCTGC	1 cut(s)	666
Cac8I	GCNNGC	7 cut(s)	7, 24, 375, 462, 865, 1153, 1626
CfoI	GCGC	3 cut(s)	415, 869, 1318
Cfr10I	RCCGGY	3 cut(s)	434, 1013, 1531
Cfr13I	GGNCC	4 cut(s)	161, 281, 1028, 1039
ClaI	ATCGAT	1 cut(s)	131
CseI	GACGC	3 cut(s)	749, 1348, 1666
Csp6I	GTAC	5 cut(s)	496, 1205, 1361, 1511, 1585
CviAII	CATG	9 cut(s)	245, 270, 374, 721, 844, 1069, 1156, 1195, 1630
CviQI	GTAC	5 cut(s)	496, 1205, 1361, 1511, 1585
DdeI	CTNAG	6 cut(s)	10, 52, 263, 632, 1093, 1289
DpnI	GATC	6 cut(s)	442, 594, 835, 1467, 1553, 1692
DpnII	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
DraI	TTTAAA	1 cut(s)	210
DrdI	GACNNNNNNGTC	1 cut(s)	1189
DseDI	GACNNNNNNGTC	1 cut(s)	1189
EaeI	YGGCCR	2 cut(s)	1392, 1626
Eam1104I	CTCTTC	1 cut(s)	701
EarI	CTCTTC	1 cut(s)	701
EciI	GGCGGA	1 cut(s)	290
Ecl136II	GAGCTC	1 cut(s)	694
Eco105I	TACGTA	1 cut(s)	1514
Eco130I	CCWWGG	4 cut(s)	269, 1329, 1616, 1629
Eco147I	AGGCCT	1 cut(s)	531
Eco24I	GRGCYC	1 cut(s)	696
Eco47I	GGWCC	2 cut(s)	161, 1039
Eco47III	AGCGCT	2 cut(s)	414, 868
Eco53kI	GAGCTC	1 cut(s)	694
Eco72I	CACGTG	2 cut(s)	1052, 1119
EcoICRI	GAGCTC	1 cut(s)	694
EcoO109I	RGGNCCY	1 cut(s)	1039
EcoRII	CCWGG	2 cut(s)	157, 1021
EcoT14I	CCWWGG	4 cut(s)	269, 1329, 1616, 1629
EcoT22I	ATGCAT	1 cut(s)	1416
EcoT38I	GRGCYC	1 cut(s)	696
ErhI	CCWWGG	4 cut(s)	269, 1329, 1616, 1629
FaeI	CATG	9 cut(s)	248, 273, 377, 724, 847, 1072, 1159, 1198, 1633
FalI	AAGNNNNNCTT	4 cut(s)	313, 345, 348, 380
FaqI	GGGAC	4 cut(s)	1025, 1031, 1089, 1669
FatI	CATG	9 cut(s)	244, 269, 373, 720, 843, 1068, 1155, 1194, 1629
FauI	CCCGC	2 cut(s)	469, 1217
FauNDI	CATATG	1 cut(s)	289
FbaI	TGATCA	1 cut(s)	1551
FblI	GTMKAC	3 cut(s)	513, 921, 1230
Fnu4HI	GCNGC	2 cut(s)	678, 849
FokI	GGATG	2 cut(s)	290, 1554
FriOI	GRGCYC	1 cut(s)	696
Fsp4HI	GCNGC	2 cut(s)	678, 849
FspBI	CTAG	6 cut(s)	23, 35, 864, 906, 972, 1575
GlaI	GCGC	3 cut(s)	414, 868, 1317
GluI	GCNGC	2 cut(s)	678, 849
HaeII	RGCGCY	2 cut(s)	416, 870
HaeIII	GGCC	5 cut(s)	283, 531, 1030, 1394, 1628
HapII	CCGG	8 cut(s)	121, 315, 435, 588, 789, 1014, 1259, 1532
HgaI	GACGC	3 cut(s)	749, 1348, 1666
HhaI	GCGC	3 cut(s)	415, 869, 1318
Hin1I	GRCGYC	2 cut(s)	741, 1658
Hin1II	CATG	9 cut(s)	248, 273, 377, 724, 847, 1072, 1159, 1198, 1633
Hin6I	GCGC	3 cut(s)	413, 867, 1316
HinP1I	GCGC	3 cut(s)	413, 867, 1316
HincII	GTYRAC	1 cut(s)	514
HindII	GTYRAC	1 cut(s)	514
HinfI	GANTC	6 cut(s)	124, 249, 265, 754, 1166, 1664
HpaII	CCGG	8 cut(s)	121, 315, 435, 588, 789, 1014, 1259, 1532
HphI	GGTGA	3 cut(s)	602, 994, 1003
Hpy166II	GTNNAC	8 cut(s)	94, 202, 406, 514, 922, 1060, 1090, 1231
Hpy188I	TCNGA	5 cut(s)	264, 795, 1377, 1470, 1538
Hpy188III	TCNNGA	6 cut(s)	703, 1075, 1106, 1174, 1336, 1399
Hpy8I	GTNNAC	8 cut(s)	94, 202, 406, 514, 922, 1060, 1090, 1231
HpyAV	CCTTC	4 cut(s)	350, 454, 460, 521
HpyCH4III	ACNGT	7 cut(s)	106, 117, 139, 403, 727, 1081, 1360
HpyCH4V	TGCA	8 cut(s)	68, 176, 398, 680, 785, 1151, 1414, 1591
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 44, 65, 117, 309, 740, 961, 1621
HpyF3I	CTNAG	6 cut(s)	10, 52, 263, 632, 1093, 1289
Hsp92I	GRCGYC	2 cut(s)	741, 1658
Hsp92II	CATG	9 cut(s)	248, 273, 377, 724, 847, 1072, 1159, 1198, 1633
HspAI	GCGC	3 cut(s)	413, 867, 1316
KflI	GGGWCCC	1 cut(s)	1039
Ksp22I	TGATCA	1 cut(s)	1551
Kzo9I	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
LguI	GCTCTTC	1 cut(s)	701
LmnI	GCTCC	3 cut(s)	396, 410, 553
Lsp1109I	GCAGC	2 cut(s)	664, 860
LweI	GCATC	3 cut(s)	862, 921, 1401
MaeI	CTAG	6 cut(s)	23, 35, 864, 906, 972, 1575
MaeIII	GTNAC	5 cut(s)	292, 763, 1075, 1174, 1514
MalI	GATC	6 cut(s)	442, 594, 835, 1467, 1553, 1692
MbiI	CCGCTC	1 cut(s)	1224
MboI	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
MboII	GAAGA	4 cut(s)	536, 688, 691, 991
MfeI	CAATTG	2 cut(s)	69, 1521
MflI	RGATCY	1 cut(s)	833
MhlI	GDGCHC	3 cut(s)	34, 696, 1068
MlsI	TGGCCA	2 cut(s)	1394, 1628
MluNI	TGGCCA	2 cut(s)	1394, 1628
MlyI	GAGTC	3 cut(s)	274, 748, 1175
MmeI	TCCRAC	1 cut(s)	1516
Mox20I	TGGCCA	2 cut(s)	1394, 1628
Mph1103I	ATGCAT	1 cut(s)	1416
MroXI	GAANNNNTTC	1 cut(s)	995
MscI	TGGCCA	2 cut(s)	1394, 1628
MseI	TTAA	9 cut(s)	87, 209, 339, 828, 1134, 1212, 1473, 1491, 1500
MslI	CAYNNNNRTG	3 cut(s)	243, 770, 1073
Msp20I	TGGCCA	2 cut(s)	1394, 1628
MspI	CCGG	8 cut(s)	121, 315, 435, 588, 789, 1014, 1259, 1532
MspR9I	CCNGG	5 cut(s)	159, 315, 588, 789, 1023
MunI	CAATTG	2 cut(s)	69, 1521
Mva1269I	GAATGC	1 cut(s)	79
MvaI	CCWGG	2 cut(s)	159, 1023
MvnI	CGCG	1 cut(s)	1316
MwoI	GCNNNNNNNGC	8 cut(s)	11, 44, 65, 117, 309, 740, 961, 1621
NciI	CCSGG	3 cut(s)	315, 588, 789
NcoI	CCATGG	2 cut(s)	269, 1629
NdeI	CATATG	1 cut(s)	289
NdeII	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
NheI	GCTAGC	2 cut(s)	22, 863
NlaIII	CATG	9 cut(s)	248, 273, 377, 724, 847, 1072, 1159, 1198, 1633
NlaIV	GGNNCC	4 cut(s)	361, 392, 1040, 1041
NmuCI	GTSAC	3 cut(s)	763, 1075, 1174
NsiI	ATGCAT	1 cut(s)	1416
NspI	RCATGY	2 cut(s)	377, 1072
OliI	CACNNNNGTG	1 cut(s)	770
PaeI	GCATGC	1 cut(s)	377
PceI	AGGCCT	1 cut(s)	531
PciI	ACATGT	1 cut(s)	1068
PciSI	GCTCTTC	1 cut(s)	701
PcsI	WCGNNNNNNNCGW	2 cut(s)	986, 1170
PctI	GAATGC	1 cut(s)	79
PdmI	GAANNNNTTC	1 cut(s)	995
PfeI	GAWTC	3 cut(s)	124, 249, 1664
PflMI	CCANNNNNTGG	1 cut(s)	1441
PfoI	TCCNGGA	1 cut(s)	157
PkrI	GCNGC	2 cut(s)	679, 850
PleI	GAGTC	3 cut(s)	273, 748, 1174
PmaCI	CACGTG	2 cut(s)	1052, 1119
PmlI	CACGTG	2 cut(s)	1052, 1119
PpsI	GAGTC	3 cut(s)	273, 748, 1174
Ppu21I	YACGTR	5 cut(s)	1052, 1119, 1438, 1514, 1588
PpuMI	RGGWCCY	1 cut(s)	1039
PscI	ACATGT	1 cut(s)	1068
PshBI	ATTAAT	1 cut(s)	1473
Psp124BI	GAGCTC	1 cut(s)	696
Psp1406I	AACGTT	1 cut(s)	1385
Psp5II	RGGWCCY	1 cut(s)	1039
Psp6I	CCWGG	2 cut(s)	157, 1021
PspCI	CACGTG	2 cut(s)	1052, 1119
PspGI	CCWGG	2 cut(s)	157, 1021
PspN4I	GGNNCC	4 cut(s)	361, 392, 1040, 1041
PspPI	GGNCC	4 cut(s)	161, 281, 1028, 1039
PspPPI	RGGWCCY	1 cut(s)	1039
PsuI	RGATCY	1 cut(s)	833
RsaI	GTAC	5 cut(s)	497, 1206, 1362, 1512, 1586
RsaNI	GTAC	5 cut(s)	496, 1205, 1361, 1511, 1585
RseI	CAYNNNNRTG	3 cut(s)	243, 770, 1073
SacI	GAGCTC	1 cut(s)	696
SalI	GTCGAC	1 cut(s)	512
SapI	GCTCTTC	1 cut(s)	701
SaqAI	TTAA	9 cut(s)	87, 209, 339, 828, 1134, 1212, 1473, 1491, 1500
SatI	GCNGC	2 cut(s)	678, 849
Sau3AI	GATC	6 cut(s)	440, 592, 833, 1465, 1551, 1690
Sau96I	GGNCC	4 cut(s)	161, 281, 1028, 1039
SchI	GAGTC	3 cut(s)	274, 748, 1175
ScrFI	CCNGG	5 cut(s)	159, 315, 588, 789, 1023
SduI	GDGCHC	3 cut(s)	34, 696, 1068
SfaNI	GCATC	3 cut(s)	862, 921, 1401
SfcI	CTRYAG	1 cut(s)	138
SinI	GGWCC	2 cut(s)	161, 1039
SmiMI	CAYNNNNRTG	3 cut(s)	243, 770, 1073
SnaBI	TACGTA	1 cut(s)	1514
SphI	GCATGC	1 cut(s)	377
SseBI	AGGCCT	1 cut(s)	531
SsiI	CCGC	5 cut(s)	275, 462, 879, 1224, 1505
SspI	AATATT	1 cut(s)	1311
SspMI	CTAG	6 cut(s)	23, 35, 864, 906, 972, 1575
SstI	GAGCTC	1 cut(s)	696
StuI	AGGCCT	1 cut(s)	531
StyD4I	CCNGG	5 cut(s)	157, 313, 586, 787, 1021
StyI	CCWWGG	4 cut(s)	269, 1329, 1616, 1629
TaaI	ACNGT	7 cut(s)	106, 117, 139, 403, 727, 1081, 1360
TaqI	TCGA	8 cut(s)	131, 439, 513, 899, 1296, 1355, 1398, 1561
TatI	WGTACW	2 cut(s)	1204, 1360
TfiI	GAWTC	3 cut(s)	124, 249, 1664
Tru1I	TTAA	9 cut(s)	87, 209, 339, 828, 1134, 1212, 1473, 1491, 1500
Tru9I	TTAA	9 cut(s)	87, 209, 339, 828, 1134, 1212, 1473, 1491, 1500
TscAI	CASTG	4 cut(s)	245, 352, 640, 1040
TseFI	GTSAC	3 cut(s)	763, 1075, 1174
TseI	GCWGC	2 cut(s)	677, 848
Tsp45I	GTSAC	3 cut(s)	763, 1075, 1174
TspDTI	ATGAA	2 cut(s)	1172, 1598
TspGWI	ACGGA	4 cut(s)	383, 423, 846, 1292
TspRI	CASTG	4 cut(s)	245, 352, 640, 1040
Van91I	CCANNNNNTGG	1 cut(s)	1441
VpaK11BI	GGWCC	2 cut(s)	161, 1039
VspI	ATTAAT	1 cut(s)	1473
XapI	RAATTY	3 cut(s)	335, 815, 1487
XceI	RCATGY	2 cut(s)	377, 1072
XmiI	GTMKAC	3 cut(s)	513, 921, 1230
XmnI	GAANNNNTTC	1 cut(s)	995
XspI	CTAG	6 cut(s)	23, 35, 864, 906, 972, 1575
Zsp2I	ATGCAT	1 cut(s)	1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.