Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Forward (+)

11494385 .. 11496740

Gene Structure 2356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1147100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCACGGTTAGCCTTTGTGCTAGCTTGTGCTCTAGCTCTATTAGCTTCCTCAGTAGCCTCTGGTGCAATTGTTGAGCACTCGTTCAGTGTGAACAACATGACTGTTACCCGACTATGCCAGAATCAATCGATTACTGTAGTGAATGAGAGTTATCCTGGACCAACCATATATGCACGAGATGGAGACACAATTATCATCCATGTTTTAAATCAGTCGCCCTATAACATTACTATTCACTGGCATGGAGTCTTTCAGCTTTTGAGTGCATGGGCAGATGGGCCAGCATACGTAACTCAATGTCCTATACCCCCCGGACAAAGTTATACTTACAAATTTAATATCACTGGACAAGAAGGCACCCTTTGGTGGCATGCCCACATTTCGTGGCTTCGCGCAACTGTCCATGGAGCGCTTATAATACACCCGAAAACCGGTCGATCCTTCCCCTTCCCCAAGCCCGCCAAAGAAGTTCCCATCATATTAGGAGATTGGTACAGTGGCAATGTGGTCGACATTGAGCAAGAAGGCCTATCCAAAGGAATAGCTCCTAACCTTTCAAATGCTTACACCATCAATGGACTTCCCGGCGATCTCTACGATTGCTCCCAAAATCAAACATATCAACTCAGTGTGGTGAGAGGAAAGACCTACCTGCTACGCCTAATCAACGCTGCACTCAATACCCAACTTTTCTTCAAGATAGCCAACCACAGCATGACAGTTGTTGCCATTGATGCCTCCTACACAACTCCTTATGTCACAGACGTGGTGGTTACTGGACCCGGTCAGACCACTGACGTTCTCGTCAAATTCAATCAACTTAATGGATCTTATTACATGGCCGCCACTCCCTACGCTAGCGCTGACGATACTGTCGGCTTTGATAACTCAACAACCAAAGGCATCATCGTCTACAAGGGCTACACGTCATCAACCCCCATTATGCCCCCCATGCCCAACCCTCACGACACGCCGTTGGCCAACAAGTTCTACACCAATCTCACCAGCCTCTCTAATGGGCCACACTGGGTCCCGGTCCCACGCAAAGTGGACGAGCACATGTTCGTGACAGTCGGCGTTAACTTGGCGATGTGTCCCGAAAATGCCACGTGTCAGGGCTTATTCAATAACCGATTGTCCGCAAGCATGAACAACGAGTCATTCATGGTCCCGACCAATACGTCCATGCTGGAAGCACATTTTAACAATGTGAGCGGGGTTTACACCAGAGATTTTCCTAGCAAGCCTCCGGTCAAGTTTGACTACACGGACACGAACCTCAGCCTCGACCTATCCCTGATATTTGCGCCAAAATCAACCAAGGTCAAGACGCTAAAGTTCAATTCGACAGTACAGTTGGTGTTTCAGAACATAGCGTTTTTGGCCATCGAGAACCACCCGATGCATCTCCATGGCTTCAGTTTCCATGTATTGGCACAAGGGTTTGGAAATTACGATCCGATTAATGACCCCAAAAAATTTAACTTCGTTAATCCGCAAGTACGCAACACAATTGGTGTGCCAGTCGGAGGATGGGCTGTGATCAGGTTTCGAGCAAATAATCCTGGTATCTGGTACGTGCATTGTCATTTGGACGTTCATCTGCCGTGGGGGCTGGCCATGGCTTTTGAGGTTGAAAATGGAGGGACGCCAGAATCTACTTTACCTCCACCACCACTTGATCTGCCCAAATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

567

Amino Acids

62.31

Weight (kDa)

6.69

Isoelectric Point (pI)

29.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	31 - 144	1.2e-41	Multicopper oxidase
Cu-oxidase	PF00394	157 - 308	9.7e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	412 - 548	1e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	419
AasI	GACNNNNNNGTC	3 cut(s)	806, 875, 1183
Acc36I	ACCTGC	1 cut(s)	663
AccB1I	GGYRCC	1 cut(s)	359
AccB7I	CCANNNNNTGG	1 cut(s)	1435
AccBSI	CCGCTC	1 cut(s)	1218
AccI	GTMKAC	2 cut(s)	513, 915
AccII	CGCG	1 cut(s)	396
AciI	CCGC	5 cut(s)	462, 846, 1143, 1218, 1499
AclWI	GGATC	3 cut(s)	435, 838, 1454
AcoI	YGGCCR	4 cut(s)	843, 981, 1386, 1620
AcsI	RAATTY	3 cut(s)	335, 812, 1481
AcuI	CTGAAG	1 cut(s)	1405
AcvI	CACGTG	1 cut(s)	1113
AcyI	GRCGYC	1 cut(s)	1652
AfaI	GTAC	4 cut(s)	497, 1356, 1506, 1580
AfeI	AGCGCT	2 cut(s)	414, 865
AfiI	CCNNNNNNNGG	4 cut(s)	369, 434, 1435, 1532
AflIII	ACRYGT	3 cut(s)	927, 1062, 1112
AgeI	ACCGGT	1 cut(s)	434
AgsI	TTSAA	6 cut(s)	561, 700, 817, 1129, 1345, 1640
AjiI	CACGTC	2 cut(s)	769, 930
AjnI	CCWGG	2 cut(s)	157, 1567
AleI	CACNNNNGTG	1 cut(s)	767
AluBI	AGCT	5 cut(s)	26, 38, 47, 259, 548
AluI	AGCT	5 cut(s)	26, 38, 47, 259, 548
Alw21I	GWGCWC	3 cut(s)	34, 81, 1062
Alw26I	GTCTC	1 cut(s)	180
AlwI	GGATC	3 cut(s)	435, 838, 1454
Aor51HI	AGCGCT	2 cut(s)	414, 865
AoxI	GGCC	7 cut(s)	281, 529, 843, 981, 1022, 1386, 1620
ApeKI	GCWGC	1 cut(s)	674
ApoI	RAATTY	3 cut(s)	335, 812, 1481
AseI	ATTAAT	1 cut(s)	1467
AsiGI	ACCGGT	1 cut(s)	434
AspLEI	GCGC	4 cut(s)	398, 415, 866, 1312
AspS9I	GGNCC	7 cut(s)	161, 281, 782, 1022, 1033, 1039, 1171
AsuC2I	CCSGG	4 cut(s)	315, 588, 786, 1037
AsuHPI	GGTGA	2 cut(s)	649, 997
AsuNHI	GCTAGC	2 cut(s)	22, 860
AvaII	GGWCC	5 cut(s)	161, 782, 1033, 1039, 1171
BalI	TGGCCA	3 cut(s)	983, 1388, 1622
BanI	GGYRCC	1 cut(s)	359
BauI	CACGAG	1 cut(s)	177
BbrPI	CACGTG	1 cut(s)	1113
Bbv12I	GWGCWC	3 cut(s)	34, 81, 1062
BbvCI	CCTCAGC	1 cut(s)	1283
BbvI	GCAGC	1 cut(s)	661
BccI	CCATC	6 cut(s)	176, 272, 485, 581, 1397, 1530
BceAI	ACGGC	2 cut(s)	961, 1594
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	2 cut(s)	159, 1569
BclI	TGATCA	1 cut(s)	1545
BcnI	CCSGG	4 cut(s)	315, 588, 786, 1037
BcoDI	GTCTC	1 cut(s)	180
BfaI	CTAG	4 cut(s)	23, 35, 861, 1242
BfmI	CTRYAG	1 cut(s)	138
BfoI	RGCGCY	2 cut(s)	416, 867
BfuAI	ACCTGC	1 cut(s)	663
BglI	GCCNNNNNGGC	1 cut(s)	1615
BisI	GCNGC	2 cut(s)	675, 846
BlsI	GCNGC	2 cut(s)	676, 847
Bme1390I	CCNGG	6 cut(s)	159, 315, 588, 786, 1037, 1569
Bme18I	GGWCC	5 cut(s)	161, 782, 1033, 1039, 1171
BmgBI	CACGTC	2 cut(s)	769, 930
BmgT120I	GGNCC	7 cut(s)	161, 281, 782, 1022, 1033, 1039, 1171
BmiI	GGNNCC	6 cut(s)	361, 784, 1034, 1035, 1041, 1173
BmrFI	CCNGG	6 cut(s)	159, 315, 588, 786, 1037, 1569
BmrI	ACTGGG	1 cut(s)	1039
BmsI	GCATC	4 cut(s)	727, 915, 1395, 1417
BmtI	GCTAGC	2 cut(s)	26, 864
BmuI	ACTGGG	1 cut(s)	1039
Bpu10I	CCTNAGC	1 cut(s)	1283
BpuMI	CCSGG	4 cut(s)	315, 588, 786, 1037
Bsa29I	ATCGAT	1 cut(s)	131
BsaAI	YACGTR	3 cut(s)	292, 1113, 1582
BsaHI	GRCGYC	1 cut(s)	1652
BsaJI	CCNNGG	6 cut(s)	313, 406, 1323, 1414, 1610, 1623
BsaWI	WCCGGW	2 cut(s)	434, 1252
BsaXI	ACNNNNNCTCC	4 cut(s)	590, 620, 1654, 1684
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 434, 1435, 1532
Bse118I	RCCGGY	1 cut(s)	434
Bse1I	ACTGG	5 cut(s)	245, 352, 784, 1034, 1526
Bse3DI	GCAATG	1 cut(s)	511
BseBI	CCWGG	2 cut(s)	159, 1569
BseCI	ATCGAT	1 cut(s)	131
BseDI	CCNNGG	6 cut(s)	313, 406, 1323, 1414, 1610, 1623
BseGI	GGATG	2 cut(s)	198, 1541
BseLI	CCNNNNNNNGG	4 cut(s)	369, 434, 1435, 1532
BseMI	GCAATG	1 cut(s)	511
BseMII	CTCAG	3 cut(s)	66, 643, 1297
BseNI	ACTGG	5 cut(s)	245, 352, 784, 1034, 1526
BseXI	GCAGC	1 cut(s)	661
BsgI	GTGCAG	1 cut(s)	660
Bsh1236I	CGCG	1 cut(s)	396
Bsh1285I	CGRYCG	1 cut(s)	439
BshFI	GGCC	7 cut(s)	283, 531, 845, 983, 1024, 1388, 1622
BshNI	GGYRCC	1 cut(s)	359
BshTI	ACCGGT	1 cut(s)	434
BshVI	ATCGAT	1 cut(s)	131
BsiEI	CGRYCG	1 cut(s)	439
BsiHKAI	GWGCWC	3 cut(s)	34, 81, 1062
BsiSI	CCGG	6 cut(s)	315, 435, 588, 786, 1037, 1253
BslFI	GGGAC	5 cut(s)	1019, 1025, 1083, 1157, 1663
BslI	CCNNNNNNNGG	4 cut(s)	369, 434, 1435, 1532
BsmAI	GTCTC	1 cut(s)	180
BsmFI	GGGAC	5 cut(s)	1019, 1025, 1083, 1157, 1663
BsnI	GGCC	7 cut(s)	283, 531, 845, 983, 1024, 1388, 1622
Bsp1286I	GDGCHC	3 cut(s)	34, 81, 1062
Bsp143I	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
Bsp19I	CCATGG	3 cut(s)	406, 1414, 1623
BspACI	CCGC	5 cut(s)	462, 846, 1143, 1218, 1499
BspANI	GGCC	7 cut(s)	283, 531, 845, 983, 1024, 1388, 1622
BspCNI	CTCAG	3 cut(s)	65, 642, 1296
BspDI	ATCGAT	1 cut(s)	131
BspFNI	CGCG	1 cut(s)	396
BspLI	GGNNCC	6 cut(s)	361, 784, 1034, 1035, 1041, 1173
BspMI	ACCTGC	1 cut(s)	663
BspOI	GCTAGC	2 cut(s)	26, 864
BspPI	GGATC	3 cut(s)	435, 838, 1454
BspT107I	GGYRCC	1 cut(s)	359
BsrBI	CCGCTC	1 cut(s)	1218
BsrDI	GCAATG	1 cut(s)	511
BsrFI	RCCGGY	1 cut(s)	434
BsrI	ACTGG	5 cut(s)	245, 352, 784, 1034, 1526
BssAI	RCCGGY	1 cut(s)	434
BssECI	CCNNGG	6 cut(s)	313, 406, 1323, 1414, 1610, 1623
BssMI	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
BssNI	GRCGYC	1 cut(s)	1652
BssSI	CACGAG	1 cut(s)	177
BssT1I	CCWWGG	4 cut(s)	406, 1323, 1414, 1623
Bst2BI	CACGAG	1 cut(s)	177
Bst2UI	CCWGG	2 cut(s)	159, 1569
BstACI	GRCGYC	1 cut(s)	1652
BstBAI	YACGTR	3 cut(s)	292, 1113, 1582
BstC8I	GCNNGC	8 cut(s)	24, 285, 375, 462, 862, 1147, 1247, 1620
BstDEI	CTNAG	3 cut(s)	52, 629, 1283
BstDSI	CCRYGG	4 cut(s)	406, 1414, 1610, 1623
BstF5I	GGATG	2 cut(s)	198, 1541
BstFNI	CGCG	1 cut(s)	396
BstH2I	RGCGCY	2 cut(s)	416, 867
BstHHI	GCGC	4 cut(s)	398, 415, 866, 1312
BstKTI	GATC	6 cut(s)	443, 595, 833, 1462, 1548, 1687
BstMAI	GTCTC	1 cut(s)	180
BstMBI	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
BstMCI	CGRYCG	1 cut(s)	439
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 44, 65, 737, 955, 1385, 1615
BstNI	CCWGG	2 cut(s)	159, 1569
BstNSI	RCATGY	2 cut(s)	377, 1066
BstSCI	CCNGG	6 cut(s)	157, 313, 586, 784, 1035, 1567
BstSFI	CTRYAG	1 cut(s)	138
BstSNI	TACGTA	1 cut(s)	292
BstUI	CGCG	1 cut(s)	396
BstV1I	GCAGC	1 cut(s)	661
BstX2I	RGATCY	1 cut(s)	830
BstYI	RGATCY	1 cut(s)	830
Bsu15I	ATCGAT	1 cut(s)	131
BsuRI	GGCC	7 cut(s)	283, 531, 845, 983, 1024, 1388, 1622
BsuTUI	ATCGAT	1 cut(s)	131
BtgI	CCRYGG	4 cut(s)	406, 1414, 1610, 1623
BtgZI	GCGATG	1 cut(s)	1106
BtrI	CACGTC	2 cut(s)	769, 930
BtsCI	GGATG	2 cut(s)	198, 1541
BtsIMutI	CAGTG	7 cut(s)	94, 238, 345, 505, 637, 795, 1027
BveI	ACCTGC	1 cut(s)	663
Cac8I	GCNNGC	8 cut(s)	24, 285, 375, 462, 862, 1147, 1247, 1620
CfoI	GCGC	4 cut(s)	398, 415, 866, 1312
Cfr10I	RCCGGY	1 cut(s)	434
Cfr13I	GGNCC	7 cut(s)	161, 281, 782, 1022, 1033, 1039, 1171
ClaI	ATCGAT	1 cut(s)	131
CseI	GACGC	2 cut(s)	1342, 1660
Csp6I	GTAC	4 cut(s)	496, 1355, 1505, 1579
CspAI	ACCGGT	1 cut(s)	434
CviQI	GTAC	4 cut(s)	496, 1355, 1505, 1579
DdeI	CTNAG	3 cut(s)	52, 629, 1283
DpnI	GATC	6 cut(s)	442, 594, 832, 1461, 1547, 1686
DpnII	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
DraI	TTTAAA	1 cut(s)	210
DrdI	GACNNNNNNGTC	3 cut(s)	806, 875, 1183
DseDI	GACNNNNNNGTC	3 cut(s)	806, 875, 1183
EaeI	YGGCCR	4 cut(s)	843, 981, 1386, 1620
Eco105I	TACGTA	1 cut(s)	292
Eco130I	CCWWGG	4 cut(s)	406, 1323, 1414, 1623
Eco147I	AGGCCT	1 cut(s)	531
Eco47I	GGWCC	5 cut(s)	161, 782, 1033, 1039, 1171
Eco47III	AGCGCT	2 cut(s)	414, 865
Eco57I	CTGAAG	1 cut(s)	1405
Eco72I	CACGTG	1 cut(s)	1113
EcoO109I	RGGNCCY	1 cut(s)	1033
EcoRII	CCWGG	2 cut(s)	157, 1567
EcoT14I	CCWWGG	4 cut(s)	406, 1323, 1414, 1623
EcoT22I	ATGCAT	1 cut(s)	1410
ErhI	CCWWGG	4 cut(s)	406, 1323, 1414, 1623
FalI	AAGNNNNNCTT	4 cut(s)	313, 345, 348, 380
FaqI	GGGAC	5 cut(s)	1019, 1025, 1083, 1157, 1663
FauI	CCCGC	2 cut(s)	469, 1211
FbaI	TGATCA	1 cut(s)	1545
FblI	GTMKAC	2 cut(s)	513, 915
Fnu4HI	GCNGC	2 cut(s)	675, 846
FokI	GGATG	2 cut(s)	185, 1548
Fsp4HI	GCNGC	2 cut(s)	675, 846
FspBI	CTAG	4 cut(s)	23, 35, 861, 1242
GlaI	GCGC	4 cut(s)	397, 414, 865, 1311
GluI	GCNGC	2 cut(s)	675, 846
HaeII	RGCGCY	2 cut(s)	416, 867
HaeIII	GGCC	7 cut(s)	283, 531, 845, 983, 1024, 1388, 1622
HapII	CCGG	6 cut(s)	315, 435, 588, 786, 1037, 1253
HgaI	GACGC	2 cut(s)	1342, 1660
HhaI	GCGC	4 cut(s)	398, 415, 866, 1312
Hin1I	GRCGYC	1 cut(s)	1652
Hin6I	GCGC	4 cut(s)	396, 413, 864, 1310
HinP1I	GCGC	4 cut(s)	396, 413, 864, 1310
HincII	GTYRAC	2 cut(s)	514, 1084
HindII	GTYRAC	2 cut(s)	514, 1084
HinfI	GANTC	4 cut(s)	124, 249, 1160, 1658
HpaI	GTTAAC	1 cut(s)	1084
HpaII	CCGG	6 cut(s)	315, 435, 588, 786, 1037, 1253
HphI	GGTGA	2 cut(s)	649, 997
Hpy166II	GTNNAC	6 cut(s)	94, 514, 916, 1054, 1084, 1225
Hpy188I	TCNGA	4 cut(s)	792, 1371, 1464, 1532
Hpy188III	TCNNGA	7 cut(s)	700, 968, 1069, 1100, 1174, 1330, 1393
Hpy8I	GTNNAC	6 cut(s)	94, 514, 916, 1054, 1084, 1225
HpyAV	CCTTC	4 cut(s)	350, 454, 460, 521
HpyCH4IV	ACGT	8 cut(s)	291, 768, 801, 929, 1112, 1184, 1581, 1599
HpyCH4V	TGCA	6 cut(s)	68, 176, 269, 677, 1408, 1585
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 44, 65, 737, 955, 1385, 1615
HpyF3I	CTNAG	3 cut(s)	52, 629, 1283
HpySE526I	ACGT	8 cut(s)	291, 768, 801, 929, 1112, 1184, 1581, 1599
Hsp92I	GRCGYC	1 cut(s)	1652
HspAI	GCGC	4 cut(s)	396, 413, 864, 1310
KflI	GGGWCCC	1 cut(s)	1033
Ksp22I	TGATCA	1 cut(s)	1545
KspAI	GTTAAC	1 cut(s)	1084
Kzo9I	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
LmnI	GCTCC	3 cut(s)	410, 553, 611
Lsp1109I	GCAGC	1 cut(s)	661
LweI	GCATC	4 cut(s)	727, 915, 1395, 1417
MaeI	CTAG	4 cut(s)	23, 35, 861, 1242
MaeII	ACGT	8 cut(s)	291, 768, 801, 929, 1112, 1184, 1581, 1599
MaeIII	GTNAC	5 cut(s)	106, 292, 760, 775, 1069
MalI	GATC	6 cut(s)	442, 594, 832, 1461, 1547, 1686
MbiI	CCGCTC	1 cut(s)	1218
MboI	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
MboII	GAAGA	1 cut(s)	688
MfeI	CAATTG	2 cut(s)	69, 1515
MflI	RGATCY	1 cut(s)	830
MhlI	GDGCHC	3 cut(s)	34, 81, 1062
MlsI	TGGCCA	3 cut(s)	983, 1388, 1622
MluCI	AATT	8 cut(s)	69, 192, 335, 812, 1345, 1453, 1481, 1515
MluNI	TGGCCA	3 cut(s)	983, 1388, 1622
MlyI	GAGTC	2 cut(s)	258, 1169
MmeI	TCCRAC	1 cut(s)	1510
Mox20I	TGGCCA	3 cut(s)	983, 1388, 1622
Mph1103I	ATGCAT	1 cut(s)	1410
MscI	TGGCCA	3 cut(s)	983, 1388, 1622
MseI	TTAA	8 cut(s)	209, 339, 825, 1083, 1206, 1467, 1485, 1494
MslI	CAYNNNNRTG	4 cut(s)	243, 767, 1067, 1413
Msp20I	TGGCCA	3 cut(s)	983, 1388, 1622
MspI	CCGG	6 cut(s)	315, 435, 588, 786, 1037, 1253
MspR9I	CCNGG	6 cut(s)	159, 315, 588, 786, 1037, 1569
MunI	CAATTG	2 cut(s)	69, 1515
MvaI	CCWGG	2 cut(s)	159, 1569
MvnI	CGCG	1 cut(s)	396
MwoI	GCNNNNNNNGC	7 cut(s)	11, 44, 65, 737, 955, 1385, 1615
NciI	CCSGG	4 cut(s)	315, 588, 786, 1037
NcoI	CCATGG	3 cut(s)	406, 1414, 1623
NdeII	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
NheI	GCTAGC	2 cut(s)	22, 860
NlaIV	GGNNCC	6 cut(s)	361, 784, 1034, 1035, 1041, 1173
NmuCI	GTSAC	2 cut(s)	760, 1069
NsiI	ATGCAT	1 cut(s)	1410
NspI	RCATGY	2 cut(s)	377, 1066
OliI	CACNNNNGTG	1 cut(s)	767
PaeI	GCATGC	1 cut(s)	377
PceI	AGGCCT	1 cut(s)	531
PciI	ACATGT	1 cut(s)	1062
PfeI	GAWTC	2 cut(s)	124, 1658
PflFI	GACNNNGTC	1 cut(s)	786
PflMI	CCANNNNNTGG	1 cut(s)	1435
PfoI	TCCNGGA	1 cut(s)	157
PinAI	ACCGGT	1 cut(s)	434
PkrI	GCNGC	2 cut(s)	676, 847
PleI	GAGTC	2 cut(s)	257, 1168
PmaCI	CACGTG	1 cut(s)	1113
PmlI	CACGTG	1 cut(s)	1113
PpsI	GAGTC	2 cut(s)	257, 1168
Ppu21I	YACGTR	3 cut(s)	292, 1113, 1582
PpuMI	RGGWCCY	1 cut(s)	1033
PscI	ACATGT	1 cut(s)	1062
PshBI	ATTAAT	1 cut(s)	1467
PsiI	TTATAA	1 cut(s)	419
Psp5II	RGGWCCY	1 cut(s)	1033
Psp6I	CCWGG	2 cut(s)	157, 1567
PspCI	CACGTG	1 cut(s)	1113
PspGI	CCWGG	2 cut(s)	157, 1567
PspN4I	GGNNCC	6 cut(s)	361, 784, 1034, 1035, 1041, 1173
PspPI	GGNCC	7 cut(s)	161, 281, 782, 1022, 1033, 1039, 1171
PspPPI	RGGWCCY	1 cut(s)	1033
PsuI	RGATCY	1 cut(s)	830
PsyI	GACNNNGTC	1 cut(s)	786
RsaI	GTAC	4 cut(s)	497, 1356, 1506, 1580
RsaNI	GTAC	4 cut(s)	496, 1355, 1505, 1579
RseI	CAYNNNNRTG	4 cut(s)	243, 767, 1067, 1413
SalI	GTCGAC	1 cut(s)	512
SaqAI	TTAA	8 cut(s)	209, 339, 825, 1083, 1206, 1467, 1485, 1494
SatI	GCNGC	2 cut(s)	675, 846
Sau3AI	GATC	6 cut(s)	440, 592, 830, 1459, 1545, 1684
Sau96I	GGNCC	7 cut(s)	161, 281, 782, 1022, 1033, 1039, 1171
SchI	GAGTC	2 cut(s)	258, 1169
ScrFI	CCNGG	6 cut(s)	159, 315, 588, 786, 1037, 1569
SduI	GDGCHC	3 cut(s)	34, 81, 1062
SfaNI	GCATC	4 cut(s)	727, 915, 1395, 1417
SfcI	CTRYAG	1 cut(s)	138
SinI	GGWCC	5 cut(s)	161, 782, 1033, 1039, 1171
SmiMI	CAYNNNNRTG	4 cut(s)	243, 767, 1067, 1413
SnaBI	TACGTA	1 cut(s)	292
SphI	GCATGC	1 cut(s)	377
Sse9I	AATT	8 cut(s)	69, 192, 335, 812, 1345, 1453, 1481, 1515
SseBI	AGGCCT	1 cut(s)	531
SsiI	CCGC	5 cut(s)	462, 846, 1143, 1218, 1499
SspMI	CTAG	4 cut(s)	23, 35, 861, 1242
StuI	AGGCCT	1 cut(s)	531
StyD4I	CCNGG	6 cut(s)	157, 313, 586, 784, 1035, 1567
StyI	CCWWGG	4 cut(s)	406, 1323, 1414, 1623
TaiI	ACGT	8 cut(s)	294, 771, 804, 932, 1115, 1187, 1584, 1602
TaqI	TCGA	7 cut(s)	131, 439, 513, 1290, 1349, 1392, 1555
TasI	AATT	8 cut(s)	69, 192, 335, 812, 1345, 1453, 1481, 1515
TatI	WGTACW	1 cut(s)	1354
TauI	GCSGC	1 cut(s)	848
TfiI	GAWTC	2 cut(s)	124, 1658
Tru1I	TTAA	8 cut(s)	209, 339, 825, 1083, 1206, 1467, 1485, 1494
Tru9I	TTAA	8 cut(s)	209, 339, 825, 1083, 1206, 1467, 1485, 1494
TscAI	CASTG	7 cut(s)	94, 245, 352, 505, 637, 802, 1034
TseFI	GTSAC	2 cut(s)	760, 1069
TseI	GCWGC	1 cut(s)	674
Tsp45I	GTSAC	2 cut(s)	760, 1069
TspDTI	ATGAA	3 cut(s)	1156, 1166, 1592
TspGWI	ACGGA	1 cut(s)	1286
TspRI	CASTG	7 cut(s)	94, 245, 352, 505, 637, 802, 1034
Tth111I	GACNNNGTC	1 cut(s)	786
Van91I	CCANNNNNTGG	1 cut(s)	1435
VpaK11BI	GGWCC	5 cut(s)	161, 782, 1033, 1039, 1171
VspI	ATTAAT	1 cut(s)	1467
XapI	RAATTY	3 cut(s)	335, 812, 1481
XceI	RCATGY	2 cut(s)	377, 1066
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1533
XmiI	GTMKAC	2 cut(s)	513, 915
XspI	CTAG	4 cut(s)	23, 35, 861, 1242
Zsp2I	ATGCAT	1 cut(s)	1410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.