Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Forward (+)

23149505 .. 23152333

Gene Structure 2829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1142300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCACGGTTAGCCTTTCTGCTAGCTTGTGCTCTAGCTCTATTGGCTTCCTCAGTGGCATCTGGTGCAATTGTTGAGCATTCTTTTAATGTGAACAATCTGACTGTTACCCGACTCTGCCAAAATCAATCGATAACTGTAGTAAATGAGAGTTATCCTGGACCAACCATATATGCACGAGAGGGAGACACACTTATCATCCATGTTTTAAACCAGTCACCCTATAACATTACTATTCACTGGCATGGAATCTATCAGCTTCTAAGTGCATGGGCAGATGGGCCTGCATACGTAACTCAATGTCCTATACCCCCCGGACAAAGCTATACTTACAAATTTAATATCACTGGACAAGAAGGCACCCTTTGGTGGCATGCCCACATTTCGTGGCTCCGTGCAACTGTCCACGGAGCGCTTATAATACACCCGAAAGCCGGTCAATCCTTCCCCTTCCCCAAGCCCGCCAAAGAAGTTCCCATCATATTAGGAGATTGGTACAGTGGCAATGTGGTCGACATTGAGCAAGAAGGCCTATCCAAGGGAATAGCTCCTAACCTTTCAAATGCTTACACCATCAATGGACTTCCCGGTGATCTCTACGACTGCTCTCAAAATCAAACATATCAGCTCAGTGTGGTGAGAGGAAAGACCTACTTGCTACGCCTAATCAACGCTGCACTCAATACCCAGCTCTTCTTCAAGATAGCCAATCACAACATGACAGTTGTTGCCATCGACGCCTCCTACACGACTCCTTATGATACAGACGTGGTGGTTATTGCACCTGGTCAGACCATTGACATTCTCGTCAAATTCAATCAACTTAACGGATCTTATTACATGGCCGCCACTCCTTACGCTAGCGCTGATGATACTGTCGGCTTTGATAACTCGACAACCAGAGGCATCATCGTCTACAAGGGCTACACGTCATCAACCCCCATTATGCCCCCCATGCCTAACCCTCACGACACGCCGTTGGCCCATAAGTTCCTCACCAATCTCACCGGCCTCCCTGGTGGGCCCCACTGGGTCCCAGTCCCACGCAAGGTGGACGAGCACATGTTCGTGACAGTCGGCGTTAACTTAGCGATGTGTCCCGAAAATACCACGTGTCAAGGCTTATTCAATAACCGATTCTCTGCGAGCATGAATAACGAGTCATTCATGGCCCCGACCAATACGTCCATGTTGGAAGCACATTTTAACAACGTGAACGGGGTTTATACTAGAGATTTTCCTAACGAGCCTCCGGTCAAGTTTGACTACACAGACACGAACCTCAGCCTCGACTTATCCTTGATATTTGCGCCAAAATCAACAAAGGTCAAGACGTTGAAGTTCAATTCGACAGTACAGTTGGTGTTTCAGAACACAGCATTTTTGGCCATCGAGAACCACCCGATGCATCTCCACGGCTTCGATTTCCACGTATTGGCACAAGGGTTTGGAAATTACGACCCGATTAATGACCCCAAAAAATTTAACTTCGTTAATCCGCAAGTACGTAACACAATTGGTGTGCCGGTCGGAGGATGGGCTGTGATCAGGTTTCGAGCAAATAATCCTGGTATCTGGTACGTGCATTGTCACTTGGACGTTCATCTGCCTTGGGGGCTGGCCATGGCTTTTGAGGTTGAAAATGGAGGGACGCCAGAATCTACTTTGCCTCCACCACCACTTGATCTGCCGAAATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

567

Amino Acids

62.45

Weight (kDa)

6.22

Isoelectric Point (pI)

30.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	31 - 145	6.1e-42	Multicopper oxidase
Cu-oxidase	PF00394	157 - 308	1e-42	Multicopper oxidase
Cu-oxidase_2	PF07731	413 - 548	5e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	419
AasI	GACNNNNNNGTC	2 cut(s)	806, 1183
AccB1I	GGYRCC	1 cut(s)	359
AccB7I	CCANNNNNTGG	1 cut(s)	1435
AccI	GTMKAC	2 cut(s)	513, 915
AciI	CCGC	3 cut(s)	462, 846, 1499
AclWI	GGATC	1 cut(s)	838
AcoI	YGGCCR	3 cut(s)	843, 1386, 1620
AcsI	RAATTY	3 cut(s)	335, 812, 1481
AcvI	CACGTG	1 cut(s)	1113
AcyI	GRCGYC	2 cut(s)	738, 1652
AfaI	GTAC	4 cut(s)	497, 1356, 1506, 1580
AfeI	AGCGCT	2 cut(s)	414, 865
AfiI	CCNNNNNNNGG	6 cut(s)	369, 434, 538, 1048, 1435, 1532
AflIII	ACRYGT	3 cut(s)	927, 1062, 1112
AgsI	TTSAA	7 cut(s)	561, 700, 817, 1129, 1339, 1345, 1640
AjiI	CACGTC	2 cut(s)	769, 930
AjnI	CCWGG	4 cut(s)	157, 784, 1015, 1567
AluBI	AGCT	7 cut(s)	26, 38, 259, 324, 548, 628, 691
AluI	AGCT	7 cut(s)	26, 38, 259, 324, 548, 628, 691
Alw21I	GWGCWC	2 cut(s)	34, 1062
Alw26I	GTCTC	1 cut(s)	180
AlwI	GGATC	1 cut(s)	838
Aor51HI	AGCGCT	2 cut(s)	414, 865
AoxI	GGCC	9 cut(s)	281, 529, 843, 981, 1009, 1022, 1170, 1386, 1620
ApaI	GGGCCC	1 cut(s)	1026
ApeKI	GCWGC	1 cut(s)	674
ApoI	RAATTY	3 cut(s)	335, 812, 1481
AseI	ATTAAT	1 cut(s)	1467
AspLEI	GCGC	3 cut(s)	415, 866, 1312
AspS9I	GGNCC	7 cut(s)	161, 281, 982, 1022, 1023, 1033, 1171
AsuC2I	CCSGG	2 cut(s)	315, 588
AsuHPI	GGTGA	5 cut(s)	210, 602, 649, 988, 997
AsuNHI	GCTAGC	2 cut(s)	22, 860
AvaII	GGWCC	2 cut(s)	161, 1033
BaeGI	GKGCMC	1 cut(s)	1026
BaeI	ACNNNNGTAYC	2 cut(s)	753, 786
BalI	TGGCCA	2 cut(s)	1388, 1622
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	1 cut(s)	1026
BauI	CACGAG	1 cut(s)	177
BbrPI	CACGTG	1 cut(s)	1113
Bbv12I	GWGCWC	2 cut(s)	34, 1062
BbvCI	CCTCAGC	1 cut(s)	1283
BbvI	GCAGC	1 cut(s)	661
BccI	CCATC	6 cut(s)	272, 485, 581, 740, 1397, 1530
BceAI	ACGGC	2 cut(s)	961, 1432
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	4 cut(s)	159, 786, 1017, 1569
BclI	TGATCA	1 cut(s)	1545
BcnI	CCSGG	2 cut(s)	315, 588
BcoDI	GTCTC	1 cut(s)	180
BfaI	CTAG	4 cut(s)	23, 35, 861, 1230
BfmI	CTRYAG	1 cut(s)	138
BfoI	RGCGCY	2 cut(s)	416, 867
BglI	GCCNNNNNGGC	1 cut(s)	1615
BisI	GCNGC	2 cut(s)	675, 846
BlsI	GCNGC	2 cut(s)	676, 847
Bme1390I	CCNGG	6 cut(s)	159, 315, 588, 786, 1017, 1569
Bme18I	GGWCC	2 cut(s)	161, 1033
BmgBI	CACGTC	2 cut(s)	769, 930
BmgT120I	GGNCC	7 cut(s)	161, 281, 982, 1022, 1023, 1033, 1171
BmiI	GGNNCC	7 cut(s)	361, 392, 1024, 1025, 1034, 1035, 1173
BmrFI	CCNGG	6 cut(s)	159, 315, 588, 786, 1017, 1569
BmrI	ACTGGG	2 cut(s)	1031, 1039
BmsI	GCATC	4 cut(s)	68, 915, 1395, 1417
BmtI	GCTAGC	2 cut(s)	26, 864
BmuI	ACTGGG	2 cut(s)	1031, 1039
Bpu10I	CCTNAGC	1 cut(s)	1283
BpuMI	CCSGG	2 cut(s)	315, 588
Bsa29I	ATCGAT	1 cut(s)	131
BsaAI	YACGTR	5 cut(s)	292, 1113, 1432, 1508, 1582
BsaHI	GRCGYC	2 cut(s)	738, 1652
BsaJI	CCNNGG	7 cut(s)	313, 406, 537, 1015, 1414, 1610, 1623
BsaWI	WCCGGW	1 cut(s)	1252
BsaXI	ACNNNNNCTCC	2 cut(s)	1654, 1684
Bsc4I	CCNNNNNNNGG	6 cut(s)	369, 434, 538, 1048, 1435, 1532
Bse118I	RCCGGY	3 cut(s)	434, 1007, 1525
Bse1I	ACTGG	5 cut(s)	214, 245, 352, 1034, 1037
Bse3DI	GCAATG	1 cut(s)	511
BseBI	CCWGG	4 cut(s)	159, 786, 1017, 1569
BseCI	ATCGAT	1 cut(s)	131
BseDI	CCNNGG	7 cut(s)	313, 406, 537, 1015, 1414, 1610, 1623
BseGI	GGATG	2 cut(s)	198, 1541
BseLI	CCNNNNNNNGG	6 cut(s)	369, 434, 538, 1048, 1435, 1532
BseMI	GCAATG	1 cut(s)	511
BseMII	CTCAG	3 cut(s)	66, 643, 1297
BseNI	ACTGG	5 cut(s)	214, 245, 352, 1034, 1037
BseSI	GKGCMC	1 cut(s)	1026
BseXI	GCAGC	1 cut(s)	661
BseYI	CCCAGC	1 cut(s)	687
BsgI	GTGCAG	1 cut(s)	660
Bsh1285I	CGRYCG	1 cut(s)	1530
BshFI	GGCC	9 cut(s)	283, 531, 845, 983, 1011, 1024, 1172, 1388, 1622
BshNI	GGYRCC	1 cut(s)	359
BshVI	ATCGAT	1 cut(s)	131
BsiEI	CGRYCG	1 cut(s)	1530
BsiHKAI	GWGCWC	2 cut(s)	34, 1062
BsiSI	CCGG	6 cut(s)	315, 435, 588, 1008, 1253, 1526
BslFI	GGGAC	4 cut(s)	1019, 1025, 1083, 1663
BslI	CCNNNNNNNGG	6 cut(s)	369, 434, 538, 1048, 1435, 1532
BsmAI	GTCTC	1 cut(s)	180
BsmFI	GGGAC	4 cut(s)	1019, 1025, 1083, 1663
BsmI	GAATGC	1 cut(s)	79
BsnI	GGCC	9 cut(s)	283, 531, 845, 983, 1011, 1024, 1172, 1388, 1622
Bsp120I	GGGCCC	1 cut(s)	1022
Bsp1286I	GDGCHC	3 cut(s)	34, 1026, 1062
Bsp143I	GATC	4 cut(s)	592, 830, 1545, 1684
Bsp19I	CCATGG	1 cut(s)	1623
BspACI	CCGC	3 cut(s)	462, 846, 1499
BspANI	GGCC	9 cut(s)	283, 531, 845, 983, 1011, 1024, 1172, 1388, 1622
BspCNI	CTCAG	3 cut(s)	65, 642, 1296
BspDI	ATCGAT	1 cut(s)	131
BspLI	GGNNCC	7 cut(s)	361, 392, 1024, 1025, 1034, 1035, 1173
BspOI	GCTAGC	2 cut(s)	26, 864
BspPI	GGATC	1 cut(s)	838
BspQI	GCTCTTC	1 cut(s)	698
BspT107I	GGYRCC	1 cut(s)	359
BsrDI	GCAATG	1 cut(s)	511
BsrFI	RCCGGY	3 cut(s)	434, 1007, 1525
BsrI	ACTGG	5 cut(s)	214, 245, 352, 1034, 1037
BssAI	RCCGGY	3 cut(s)	434, 1007, 1525
BssECI	CCNNGG	7 cut(s)	313, 406, 537, 1015, 1414, 1610, 1623
BssMI	GATC	4 cut(s)	592, 830, 1545, 1684
BssNI	GRCGYC	2 cut(s)	738, 1652
BssSI	CACGAG	1 cut(s)	177
BssT1I	CCWWGG	3 cut(s)	537, 1610, 1623
Bst2BI	CACGAG	1 cut(s)	177
Bst2UI	CCWGG	4 cut(s)	159, 786, 1017, 1569
Bst6I	CTCTTC	1 cut(s)	698
BstACI	GRCGYC	2 cut(s)	738, 1652
BstAPI	GCANNNNNTGC	1 cut(s)	65
BstBAI	YACGTR	5 cut(s)	292, 1113, 1432, 1508, 1582
BstC8I	GCNNGC	7 cut(s)	24, 285, 375, 462, 862, 1147, 1620
BstDEI	CTNAG	5 cut(s)	52, 263, 629, 1087, 1283
BstDSI	CCRYGG	3 cut(s)	406, 1414, 1623
BstENI	CCTNNNNNAGG	1 cut(s)	536
BstF5I	GGATG	2 cut(s)	198, 1541
BstH2I	RGCGCY	2 cut(s)	416, 867
BstHHI	GCGC	3 cut(s)	415, 866, 1312
BstKTI	GATC	4 cut(s)	595, 833, 1548, 1687
BstMAI	GTCTC	1 cut(s)	180
BstMBI	GATC	4 cut(s)	592, 830, 1545, 1684
BstMCI	CGRYCG	1 cut(s)	1530
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 44, 65, 737, 955, 1385, 1615
BstNI	CCWGG	4 cut(s)	159, 786, 1017, 1569
BstNSI	RCATGY	2 cut(s)	377, 1066
BstSCI	CCNGG	6 cut(s)	157, 313, 586, 784, 1015, 1567
BstSFI	CTRYAG	1 cut(s)	138
BstSLI	GKGCMC	1 cut(s)	1026
BstSNI	TACGTA	2 cut(s)	292, 1508
BstV1I	GCAGC	1 cut(s)	661
BstX2I	RGATCY	1 cut(s)	830
BstYI	RGATCY	1 cut(s)	830
Bsu15I	ATCGAT	1 cut(s)	131
BsuRI	GGCC	9 cut(s)	283, 531, 845, 983, 1011, 1024, 1172, 1388, 1622
BsuTUI	ATCGAT	1 cut(s)	131
BtgI	CCRYGG	3 cut(s)	406, 1414, 1623
BtgZI	GCGATG	1 cut(s)	1106
BtrI	CACGTC	2 cut(s)	769, 930
BtsCI	GGATG	2 cut(s)	198, 1541
BtsIMutI	CAGTG	6 cut(s)	60, 238, 345, 505, 637, 1027
Cac8I	GCNNGC	7 cut(s)	24, 285, 375, 462, 862, 1147, 1620
CfoI	GCGC	3 cut(s)	415, 866, 1312
Cfr10I	RCCGGY	3 cut(s)	434, 1007, 1525
Cfr13I	GGNCC	7 cut(s)	161, 281, 982, 1022, 1023, 1033, 1171
ClaI	ATCGAT	1 cut(s)	131
CseI	GACGC	2 cut(s)	746, 1660
CsiI	ACCWGGT	1 cut(s)	784
Csp6I	GTAC	4 cut(s)	496, 1355, 1505, 1579
CviQI	GTAC	4 cut(s)	496, 1355, 1505, 1579
DdeI	CTNAG	5 cut(s)	52, 263, 629, 1087, 1283
DpnI	GATC	4 cut(s)	594, 832, 1547, 1686
DpnII	GATC	4 cut(s)	592, 830, 1545, 1684
DraI	TTTAAA	1 cut(s)	210
DrdI	GACNNNNNNGTC	2 cut(s)	806, 1183
DseDI	GACNNNNNNGTC	2 cut(s)	806, 1183
EaeI	YGGCCR	3 cut(s)	843, 1386, 1620
Eam1104I	CTCTTC	1 cut(s)	698
EarI	CTCTTC	1 cut(s)	698
Eco105I	TACGTA	2 cut(s)	292, 1508
Eco130I	CCWWGG	3 cut(s)	537, 1610, 1623
Eco147I	AGGCCT	1 cut(s)	531
Eco24I	GRGCYC	1 cut(s)	1026
Eco47I	GGWCC	2 cut(s)	161, 1033
Eco47III	AGCGCT	2 cut(s)	414, 865
Eco72I	CACGTG	1 cut(s)	1113
EcoNI	CCTNNNNNAGG	1 cut(s)	536
EcoO109I	RGGNCCY	2 cut(s)	1023, 1033
EcoRII	CCWGG	4 cut(s)	157, 784, 1015, 1567
EcoT14I	CCWWGG	3 cut(s)	537, 1610, 1623
EcoT22I	ATGCAT	1 cut(s)	1410
EcoT38I	GRGCYC	1 cut(s)	1026
ErhI	CCWWGG	3 cut(s)	537, 1610, 1623
FalI	AAGNNNNNCTT	6 cut(s)	313, 345, 348, 380, 638, 670
FaqI	GGGAC	4 cut(s)	1019, 1025, 1083, 1663
FauI	CCCGC	1 cut(s)	469
FbaI	TGATCA	1 cut(s)	1545
FblI	GTMKAC	2 cut(s)	513, 915
Fnu4HI	GCNGC	2 cut(s)	675, 846
FokI	GGATG	2 cut(s)	185, 1548
FriOI	GRGCYC	1 cut(s)	1026
Fsp4HI	GCNGC	2 cut(s)	675, 846
FspBI	CTAG	4 cut(s)	23, 35, 861, 1230
GlaI	GCGC	3 cut(s)	414, 865, 1311
GluI	GCNGC	2 cut(s)	675, 846
GsaI	CCCAGC	1 cut(s)	691
HaeII	RGCGCY	2 cut(s)	416, 867
HaeIII	GGCC	9 cut(s)	283, 531, 845, 983, 1011, 1024, 1172, 1388, 1622
HapII	CCGG	6 cut(s)	315, 435, 588, 1008, 1253, 1526
HgaI	GACGC	2 cut(s)	746, 1660
HhaI	GCGC	3 cut(s)	415, 866, 1312
Hin1I	GRCGYC	2 cut(s)	738, 1652
Hin6I	GCGC	3 cut(s)	413, 864, 1310
HinP1I	GCGC	3 cut(s)	413, 864, 1310
HincII	GTYRAC	2 cut(s)	514, 1084
HindII	GTYRAC	2 cut(s)	514, 1084
HinfI	GANTC	6 cut(s)	114, 249, 751, 1137, 1160, 1658
HpaI	GTTAAC	1 cut(s)	1084
HpaII	CCGG	6 cut(s)	315, 435, 588, 1008, 1253, 1526
HphI	GGTGA	5 cut(s)	210, 602, 649, 988, 997
Hpy166II	GTNNAC	7 cut(s)	94, 406, 514, 916, 1054, 1084, 1216
Hpy188I	TCNGA	4 cut(s)	102, 792, 1371, 1532
Hpy188III	TCNNGA	6 cut(s)	700, 968, 1069, 1100, 1330, 1393
Hpy8I	GTNNAC	7 cut(s)	94, 406, 514, 916, 1054, 1084, 1216
Hpy99I	CGWCG	1 cut(s)	740
HpyAV	CCTTC	4 cut(s)	350, 454, 460, 521
HpyCH4V	TGCA	9 cut(s)	68, 176, 269, 287, 398, 677, 782, 1408, 1585
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 44, 65, 737, 955, 1385, 1615
HpyF3I	CTNAG	5 cut(s)	52, 263, 629, 1087, 1283
Hsp92I	GRCGYC	2 cut(s)	738, 1652
HspAI	GCGC	3 cut(s)	413, 864, 1310
KflI	GGGWCCC	1 cut(s)	1033
Ksp22I	TGATCA	1 cut(s)	1545
KspAI	GTTAAC	1 cut(s)	1084
Kzo9I	GATC	4 cut(s)	592, 830, 1545, 1684
LguI	GCTCTTC	1 cut(s)	698
LmnI	GCTCC	3 cut(s)	396, 410, 553
Lsp1109I	GCAGC	1 cut(s)	661
LweI	GCATC	4 cut(s)	68, 915, 1395, 1417
MabI	ACCWGGT	1 cut(s)	784
MaeI	CTAG	4 cut(s)	23, 35, 861, 1230
MaeIII	GTNAC	6 cut(s)	106, 216, 292, 1069, 1508, 1589
MalI	GATC	4 cut(s)	594, 832, 1547, 1686
MboI	GATC	4 cut(s)	592, 830, 1545, 1684
MboII	GAAGA	2 cut(s)	685, 688
MfeI	CAATTG	2 cut(s)	69, 1515
MflI	RGATCY	1 cut(s)	830
MhlI	GDGCHC	3 cut(s)	34, 1026, 1062
MlsI	TGGCCA	2 cut(s)	1388, 1622
MluCI	AATT	7 cut(s)	69, 335, 812, 1345, 1453, 1481, 1515
MluNI	TGGCCA	2 cut(s)	1388, 1622
MlyI	GAGTC	3 cut(s)	108, 745, 1169
MmeI	TCCRAC	2 cut(s)	1173, 1510
Mox20I	TGGCCA	2 cut(s)	1388, 1622
Mph1103I	ATGCAT	1 cut(s)	1410
MscI	TGGCCA	2 cut(s)	1388, 1622
MseI	TTAA	9 cut(s)	87, 209, 339, 825, 1083, 1206, 1467, 1485, 1494
MslI	CAYNNNNRTG	2 cut(s)	243, 1067
Msp20I	TGGCCA	2 cut(s)	1388, 1622
MspI	CCGG	6 cut(s)	315, 435, 588, 1008, 1253, 1526
MspR9I	CCNGG	6 cut(s)	159, 315, 588, 786, 1017, 1569
MunI	CAATTG	2 cut(s)	69, 1515
Mva1269I	GAATGC	1 cut(s)	79
MvaI	CCWGG	4 cut(s)	159, 786, 1017, 1569
MwoI	GCNNNNNNNGC	7 cut(s)	11, 44, 65, 737, 955, 1385, 1615
NciI	CCSGG	2 cut(s)	315, 588
NcoI	CCATGG	1 cut(s)	1623
NdeII	GATC	4 cut(s)	592, 830, 1545, 1684
NheI	GCTAGC	2 cut(s)	22, 860
NlaIV	GGNNCC	7 cut(s)	361, 392, 1024, 1025, 1034, 1035, 1173
NmuCI	GTSAC	3 cut(s)	216, 1069, 1589
NsiI	ATGCAT	1 cut(s)	1410
NspI	RCATGY	2 cut(s)	377, 1066
PaeI	GCATGC	1 cut(s)	377
PceI	AGGCCT	1 cut(s)	531
PciI	ACATGT	1 cut(s)	1062
PciSI	GCTCTTC	1 cut(s)	698
PcsI	WCGNNNNNNNCGW	1 cut(s)	1428
PctI	GAATGC	1 cut(s)	79
PfeI	GAWTC	3 cut(s)	249, 1137, 1658
PflMI	CCANNNNNTGG	1 cut(s)	1435
PfoI	TCCNGGA	1 cut(s)	157
PkrI	GCNGC	2 cut(s)	676, 847
PleI	GAGTC	3 cut(s)	108, 745, 1168
PmaCI	CACGTG	1 cut(s)	1113
PmlI	CACGTG	1 cut(s)	1113
PpsI	GAGTC	3 cut(s)	108, 745, 1168
Ppu21I	YACGTR	5 cut(s)	292, 1113, 1432, 1508, 1582
PpuMI	RGGWCCY	1 cut(s)	1033
PscI	ACATGT	1 cut(s)	1062
PshBI	ATTAAT	1 cut(s)	1467
PsiI	TTATAA	1 cut(s)	419
Psp5II	RGGWCCY	1 cut(s)	1033
Psp6I	CCWGG	4 cut(s)	157, 784, 1015, 1567
PspCI	CACGTG	1 cut(s)	1113
PspFI	CCCAGC	1 cut(s)	687
PspGI	CCWGG	4 cut(s)	157, 784, 1015, 1567
PspN4I	GGNNCC	7 cut(s)	361, 392, 1024, 1025, 1034, 1035, 1173
PspOMI	GGGCCC	1 cut(s)	1022
PspPI	GGNCC	7 cut(s)	161, 281, 982, 1022, 1023, 1033, 1171
PspPPI	RGGWCCY	1 cut(s)	1033
PsuI	RGATCY	1 cut(s)	830
RsaI	GTAC	4 cut(s)	497, 1356, 1506, 1580
RsaNI	GTAC	4 cut(s)	496, 1355, 1505, 1579
RseI	CAYNNNNRTG	2 cut(s)	243, 1067
SalI	GTCGAC	1 cut(s)	512
SapI	GCTCTTC	1 cut(s)	698
SaqAI	TTAA	9 cut(s)	87, 209, 339, 825, 1083, 1206, 1467, 1485, 1494
SatI	GCNGC	2 cut(s)	675, 846
Sau3AI	GATC	4 cut(s)	592, 830, 1545, 1684
Sau96I	GGNCC	7 cut(s)	161, 281, 982, 1022, 1023, 1033, 1171
SchI	GAGTC	3 cut(s)	108, 745, 1169
ScrFI	CCNGG	6 cut(s)	159, 315, 588, 786, 1017, 1569
SduI	GDGCHC	3 cut(s)	34, 1026, 1062
SexAI	ACCWGGT	1 cut(s)	784
SfaNI	GCATC	4 cut(s)	68, 915, 1395, 1417
SfcI	CTRYAG	1 cut(s)	138
SinI	GGWCC	2 cut(s)	161, 1033
SmiMI	CAYNNNNRTG	2 cut(s)	243, 1067
SnaBI	TACGTA	2 cut(s)	292, 1508
SphI	GCATGC	1 cut(s)	377
Sse9I	AATT	7 cut(s)	69, 335, 812, 1345, 1453, 1481, 1515
SseBI	AGGCCT	1 cut(s)	531
SsiI	CCGC	3 cut(s)	462, 846, 1499
SspMI	CTAG	4 cut(s)	23, 35, 861, 1230
StuI	AGGCCT	1 cut(s)	531
StyD4I	CCNGG	6 cut(s)	157, 313, 586, 784, 1015, 1567
StyI	CCWWGG	3 cut(s)	537, 1610, 1623
TaqI	TCGA	9 cut(s)	131, 513, 735, 893, 1290, 1349, 1392, 1422, 1555
TasI	AATT	7 cut(s)	69, 335, 812, 1345, 1453, 1481, 1515
TatI	WGTACW	1 cut(s)	1354
TauI	GCSGC	1 cut(s)	848
TfiI	GAWTC	3 cut(s)	249, 1137, 1658
Tru1I	TTAA	9 cut(s)	87, 209, 339, 825, 1083, 1206, 1467, 1485, 1494
Tru9I	TTAA	9 cut(s)	87, 209, 339, 825, 1083, 1206, 1467, 1485, 1494
TscAI	CASTG	6 cut(s)	60, 245, 352, 505, 637, 1034
TseFI	GTSAC	3 cut(s)	216, 1069, 1589
TseI	GCWGC	1 cut(s)	674
Tsp45I	GTSAC	3 cut(s)	216, 1069, 1589
TspDTI	ATGAA	3 cut(s)	1156, 1166, 1592
TspGWI	ACGGA	3 cut(s)	383, 423, 843
TspRI	CASTG	6 cut(s)	60, 245, 352, 505, 637, 1034
Van91I	CCANNNNNTGG	1 cut(s)	1435
VpaK11BI	GGWCC	2 cut(s)	161, 1033
VspI	ATTAAT	1 cut(s)	1467
XagI	CCTNNNNNAGG	1 cut(s)	536
XapI	RAATTY	3 cut(s)	335, 812, 1481
XceI	RCATGY	2 cut(s)	377, 1066
XmiI	GTMKAC	2 cut(s)	513, 915
XspI	CTAG	4 cut(s)	23, 35, 861, 1230
Zsp2I	ATGCAT	1 cut(s)	1410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.