Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Forward (+)

23253741 .. 23256241

Gene Structure 2501 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1142900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGCACGCTTAGCCTTTGTGCTAGCTTGTGCTCTAGCTCTATTGGCTTCCTCAATAGCCTCTGGTGCAATTGTTGAGCATTCTTTTAACGTGAACAACCTAACTGTTAGCCGATTGTGCCGGAATCAATCAATTACTGTAGTAAATGGGAGTTATCCAGGACCAACCATATATGCACGAGATGGGGATACACTTATTGTTCACGTTTTAAACCAGTCGCCCTATAACATTAGCATTCACTGGCATGGAATCTTTCAGCTTCTAAGTGCATGGGCGGATGGACCTGCATATGTAACTCAATGCCCTATACGCCCCGGACAAAGCTATACTTACAAATTTAATATCACCGGACAAGAAGGCACCCTTTGGTGGCATGCCCACATTTCGTGGCTCCGGGCAACTGTCCATGGAGCACTCATAATCCATCCGAAAGCCGATCGATCCTTCCCCTTCCCCAAGCCCGCCAAAGAAGTTCCCATCATATTAGGAGAGTGGTACAATGGCAATGTGGTCGACATTGAGGAAGAAGGCCTATCTAAAGGAATAGGTCCTAACATTTCAAATGCTTACACCATCAATGGACTTCCTGGCGATCTCTACGACTGCTCTCAAAATCAAACATATCAGTTAAGTGTGGTGAGAGGAAAGACCTACCTGCTACGCCTAATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAATCACAACATGACAGTTGTCGCCATCGATGCCACCTACACCGCTCCTTACGTCACCGACGTGGTGGTTACCGCACCCGGTCAGACTACCGACGTTCTCGTTACATTCAATCAACCTATTGGATCTTATTACATGGCCGCCACTCCGTACGCTAGCGCTAGTGATACCATTGACTTTGATAACTCGACCACCAGAGGCATCATCATCTATAAGAACTCCACATCAACCCCGATTATGCCCCCAATGCCTAACCCTCACGACACGCCGTTGGCCCACAAGTTCCTCACTAATCTCACCGGCCTCGCCGGTGGGCCCCAGTGGGTCCCGGTCCCACTTGAGGTGGACGAGCATATGTTCGTGACAATTGGCGTCAATTTGGCGTTATGTCCCGAAAATGCCACGTGTCAGGGCCTATTCAATAACAAATTGTCCGCGAGCATGAACAATGAGTCATTCGTGCTCCCAAGCAATACGTCCATGCTGGAAGCACAGTTTCACAACATGAGCGGGGTTTACACCAGAGACTTTCCCGACGAGCCTCCAGTCAAGTTTGACTACACGGACACGAACATAAGCCTCGACTTATCCTTGATATACGCGCCAAAATCGACCAAGGTCAAGACGCTGAAGTTCAATTCGACAGTAGAGATGGTGCTTCAAAACACGGCATTTTTGGCCATCGAGAACCACCCGATGCATCTCCACGGCTTCAATTTTCATGTGTTGGCACAAGGGTTTGGAAATTATGACCCGATTAATGACCCCCAAAAATTTAACTTCGATAATCCGCAAATACGTAACACAATTGGTGTGCCGGTCGGAGGATGGGCTGTGATTAGGTTTCAAGCAAATAATCCTGGTATCTGGAACATGCACTGTCATTTGGACATTCATCTGCCGTGGGGGCTAGGTATGGCTTTTGAGGTTGAAAATGGACCGACTCCAGAATCTACTTTGCCTCCACCACCACTTGATCTGCCTAAATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

62.22

Weight (kDa)

5.81

Isoelectric Point (pI)

37.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	31 - 145	5.4e-42	Multicopper oxidase
Cu-oxidase	PF00394	157 - 308	2.4e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	411 - 547	4.9e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	292, 663
AccB1I	GGYRCC	1 cut(s)	359
AccBSI	CCGCTC	2 cut(s)	752, 1215
AccI	GTMKAC	1 cut(s)	513
AccII	CGCG	2 cut(s)	1142, 1307
AciI	CCGC	8 cut(s)	275, 462, 750, 780, 846, 1140, 1215, 1496
AclWI	GGATC	2 cut(s)	435, 838
AcoI	YGGCCR	2 cut(s)	843, 1383
AcsI	RAATTY	2 cut(s)	335, 1478
AcuI	CTGAAG	1 cut(s)	1355
AcvI	CACGTG	1 cut(s)	1110
AcyI	GRCGYC	1 cut(s)	1077
AfaI	GTAC	2 cut(s)	497, 857
AfeI	AGCGCT	1 cut(s)	865
AfiI	CCNNNNNNNGG	3 cut(s)	369, 1045, 1529
AflIII	ACRYGT	1 cut(s)	1109
AgsI	TTSAA	9 cut(s)	561, 700, 817, 1126, 1342, 1367, 1420, 1553, 1637
AjiI	CACGTC	1 cut(s)	769
AjnI	CCWGG	3 cut(s)	157, 586, 1564
AleI	CACNNNNGTG	1 cut(s)	767
AluBI	AGCT	5 cut(s)	26, 38, 259, 324, 691
AluI	AGCT	5 cut(s)	26, 38, 259, 324, 691
Alw21I	GWGCWC	3 cut(s)	34, 415, 1170
Alw26I	GTCTC	1 cut(s)	1224
AlwI	GGATC	2 cut(s)	435, 838
Aor51HI	AGCGCT	1 cut(s)	865
AoxI	GGCC	7 cut(s)	529, 843, 978, 1006, 1019, 1117, 1383
ApaI	GGGCCC	1 cut(s)	1023
ApeKI	GCWGC	1 cut(s)	674
ApoI	RAATTY	2 cut(s)	335, 1478
AseI	ATTAAT	1 cut(s)	1464
AspLEI	GCGC	2 cut(s)	866, 1309
AsuC2I	CCSGG	4 cut(s)	315, 395, 786, 1034
AsuHPI	GGTGA	4 cut(s)	337, 649, 754, 994
AsuNHI	GCTAGC	2 cut(s)	22, 860
AvaII	GGWCC	6 cut(s)	161, 281, 548, 1030, 1036, 1643
BaeGI	GKGCMC	1 cut(s)	1023
BalI	TGGCCA	1 cut(s)	1385
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	1 cut(s)	1023
BauI	CACGAG	1 cut(s)	177
BbrPI	CACGTG	1 cut(s)	1110
Bbv12I	GWGCWC	3 cut(s)	34, 415, 1170
BbvI	GCAGC	1 cut(s)	661
BccI	CCATC	9 cut(s)	176, 272, 432, 485, 581, 740, 1351, 1394, 1527
BceAI	ACGGC	4 cut(s)	958, 1389, 1429, 1591
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	3 cut(s)	159, 588, 1566
BciVI	GTATCC	1 cut(s)	181
BcnI	CCSGG	4 cut(s)	315, 395, 786, 1034
BcoDI	GTCTC	1 cut(s)	1224
BfaI	CTAG	5 cut(s)	23, 35, 861, 867, 1616
BfmI	CTRYAG	1 cut(s)	138
BfoI	RGCGCY	1 cut(s)	867
BfuAI	ACCTGC	2 cut(s)	292, 663
BfuI	GTATCC	1 cut(s)	181
BglI	GCCNNNNNGGC	1 cut(s)	1612
BisI	GCNGC	2 cut(s)	675, 846
BlpI	GCTNAGC	1 cut(s)	10
BlsI	GCNGC	2 cut(s)	676, 847
Bme1390I	CCNGG	7 cut(s)	159, 315, 395, 588, 786, 1034, 1566
Bme18I	GGWCC	6 cut(s)	161, 281, 548, 1030, 1036, 1643
BmgBI	CACGTC	1 cut(s)	769
BmiI	GGNNCC	7 cut(s)	361, 392, 1021, 1022, 1031, 1032, 1038
BmrFI	CCNGG	7 cut(s)	159, 315, 395, 588, 786, 1034, 1566
BmrI	ACTGGG	1 cut(s)	1018
BmsI	GCATC	4 cut(s)	727, 915, 1392, 1414
BmtI	GCTAGC	2 cut(s)	26, 864
BmuI	ACTGGG	1 cut(s)	1018
BoxI	GACNNNNGTC	2 cut(s)	725, 1322
BpmI	CTGGAG	2 cut(s)	1233, 1635
Bpu1102I	GCTNAGC	1 cut(s)	10
BpuEI	CTTGAG	1 cut(s)	1064
BpuMI	CCSGG	4 cut(s)	315, 395, 786, 1034
Bsa29I	ATCGAT	2 cut(s)	439, 735
BsaAI	YACGTR	2 cut(s)	1110, 1505
BsaHI	GRCGYC	1 cut(s)	1077
BsaJI	CCNNGG	5 cut(s)	313, 406, 1320, 1411, 1607
BsaWI	WCCGGW	1 cut(s)	347
BsaXI	ACNNNNNCTCC	2 cut(s)	1651, 1681
Bsc4I	CCNNNNNNNGG	3 cut(s)	369, 1045, 1529
Bse118I	RCCGGY	3 cut(s)	1004, 1013, 1522
Bse1I	ACTGG	4 cut(s)	214, 245, 1024, 1250
Bse3DI	GCAATG	1 cut(s)	511
BseBI	CCWGG	3 cut(s)	159, 588, 1566
BseCI	ATCGAT	2 cut(s)	439, 735
BseDI	CCNNGG	5 cut(s)	313, 406, 1320, 1411, 1607
BseGI	GGATG	3 cut(s)	283, 424, 1538
BseLI	CCNNNNNNNGG	3 cut(s)	369, 1045, 1529
BseMI	GCAATG	1 cut(s)	511
BseNI	ACTGG	4 cut(s)	214, 245, 1024, 1250
BseSI	GKGCMC	1 cut(s)	1023
BseXI	GCAGC	1 cut(s)	661
BsgI	GTGCAG	1 cut(s)	660
Bsh1236I	CGCG	2 cut(s)	1142, 1307
Bsh1285I	CGRYCG	2 cut(s)	439, 1527
BshFI	GGCC	7 cut(s)	531, 845, 980, 1008, 1021, 1119, 1385
BshNI	GGYRCC	1 cut(s)	359
BshVI	ATCGAT	2 cut(s)	439, 735
BsiEI	CGRYCG	2 cut(s)	439, 1527
BsiHKAI	GWGCWC	3 cut(s)	34, 415, 1170
BsiSI	CCGG	9 cut(s)	121, 315, 348, 394, 786, 1005, 1014, 1034, 1523
BsiWI	CGTACG	1 cut(s)	855
BslFI	GGGAC	3 cut(s)	1016, 1022, 1080
BslI	CCNNNNNNNGG	3 cut(s)	369, 1045, 1529
BsmAI	GTCTC	1 cut(s)	1224
BsmFI	GGGAC	3 cut(s)	1016, 1022, 1080
BsmI	GAATGC	2 cut(s)	79, 234
BsnI	GGCC	7 cut(s)	531, 845, 980, 1008, 1021, 1119, 1385
Bsp120I	GGGCCC	1 cut(s)	1019
Bsp1286I	GDGCHC	4 cut(s)	34, 415, 1023, 1170
Bsp143I	GATC	5 cut(s)	436, 440, 592, 830, 1681
Bsp1720I	GCTNAGC	1 cut(s)	10
Bsp19I	CCATGG	1 cut(s)	406
BspACI	CCGC	8 cut(s)	275, 462, 750, 780, 846, 1140, 1215, 1496
BspANI	GGCC	7 cut(s)	531, 845, 980, 1008, 1021, 1119, 1385
BspDI	ATCGAT	2 cut(s)	439, 735
BspFNI	CGCG	2 cut(s)	1142, 1307
BspLI	GGNNCC	7 cut(s)	361, 392, 1021, 1022, 1031, 1032, 1038
BspMI	ACCTGC	2 cut(s)	292, 663
BspOI	GCTAGC	2 cut(s)	26, 864
BspPI	GGATC	2 cut(s)	435, 838
BspQI	GCTCTTC	1 cut(s)	698
BspT107I	GGYRCC	1 cut(s)	359
BsrBI	CCGCTC	2 cut(s)	752, 1215
BsrDI	GCAATG	1 cut(s)	511
BsrFI	RCCGGY	3 cut(s)	1004, 1013, 1522
BsrI	ACTGG	4 cut(s)	214, 245, 1024, 1250
BssAI	RCCGGY	3 cut(s)	1004, 1013, 1522
BssECI	CCNNGG	5 cut(s)	313, 406, 1320, 1411, 1607
BssMI	GATC	5 cut(s)	436, 440, 592, 830, 1681
BssNI	GRCGYC	1 cut(s)	1077
BssSI	CACGAG	1 cut(s)	177
BssT1I	CCWWGG	2 cut(s)	406, 1320
Bst2BI	CACGAG	1 cut(s)	177
Bst2UI	CCWGG	3 cut(s)	159, 588, 1566
Bst4CI	ACNGT	7 cut(s)	106, 139, 403, 724, 1200, 1351, 1586
Bst6I	CTCTTC	1 cut(s)	698
BstACI	GRCGYC	1 cut(s)	1077
BstBAI	YACGTR	2 cut(s)	1110, 1505
BstC8I	GCNNGC	6 cut(s)	7, 24, 375, 462, 862, 1144
BstDEI	CTNAG	2 cut(s)	10, 263
BstDSI	CCRYGG	3 cut(s)	406, 1411, 1607
BstEII	GGTNACC	1 cut(s)	775
BstF5I	GGATG	3 cut(s)	283, 424, 1538
BstFNI	CGCG	2 cut(s)	1142, 1307
BstH2I	RGCGCY	1 cut(s)	867
BstHHI	GCGC	2 cut(s)	866, 1309
BstKTI	GATC	5 cut(s)	439, 443, 595, 833, 1684
BstMAI	GTCTC	1 cut(s)	1224
BstMBI	GATC	5 cut(s)	436, 440, 592, 830, 1681
BstMCI	CGRYCG	2 cut(s)	439, 1527
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 44, 65, 117, 309, 737, 952, 1382, 1612
BstNI	CCWGG	3 cut(s)	159, 588, 1566
BstNSI	RCATGY	2 cut(s)	377, 1582
BstPAI	GACNNNNGTC	2 cut(s)	725, 1322
BstPI	GGTNACC	1 cut(s)	775
BstSCI	CCNGG	7 cut(s)	157, 313, 393, 586, 784, 1032, 1564
BstSFI	CTRYAG	1 cut(s)	138
BstSLI	GKGCMC	1 cut(s)	1023
BstSNI	TACGTA	1 cut(s)	1505
BstUI	CGCG	2 cut(s)	1142, 1307
BstV1I	GCAGC	1 cut(s)	661
BstX2I	RGATCY	1 cut(s)	830
BstYI	RGATCY	1 cut(s)	830
Bsu15I	ATCGAT	2 cut(s)	439, 735
BsuI	GTATCC	1 cut(s)	181
BsuRI	GGCC	7 cut(s)	531, 845, 980, 1008, 1021, 1119, 1385
BsuTUI	ATCGAT	2 cut(s)	439, 735
BtgI	CCRYGG	3 cut(s)	406, 1411, 1607
BtrI	CACGTC	1 cut(s)	769
BtsCI	GGATG	3 cut(s)	283, 424, 1538
BtsIMutI	CAGTG	3 cut(s)	238, 1031, 1582
BveI	ACCTGC	2 cut(s)	292, 663
Cac8I	GCNNGC	6 cut(s)	7, 24, 375, 462, 862, 1144
CfoI	GCGC	2 cut(s)	866, 1309
Cfr10I	RCCGGY	3 cut(s)	1004, 1013, 1522
ClaI	ATCGAT	2 cut(s)	439, 735
CseI	GACGC	2 cut(s)	1066, 1339
Csp6I	GTAC	2 cut(s)	496, 856
CviQI	GTAC	2 cut(s)	496, 856
DdeI	CTNAG	2 cut(s)	10, 263
DpnI	GATC	5 cut(s)	438, 442, 594, 832, 1683
DpnII	GATC	5 cut(s)	436, 440, 592, 830, 1681
DraI	TTTAAA	1 cut(s)	210
EaeI	YGGCCR	2 cut(s)	843, 1383
Eam1104I	CTCTTC	1 cut(s)	698
EarI	CTCTTC	1 cut(s)	698
EciI	GGCGGA	1 cut(s)	290
Eco105I	TACGTA	1 cut(s)	1505
Eco130I	CCWWGG	2 cut(s)	406, 1320
Eco147I	AGGCCT	1 cut(s)	531
Eco24I	GRGCYC	1 cut(s)	1023
Eco47I	GGWCC	6 cut(s)	161, 281, 548, 1030, 1036, 1643
Eco47III	AGCGCT	1 cut(s)	865
Eco57I	CTGAAG	1 cut(s)	1355
Eco72I	CACGTG	1 cut(s)	1110
Eco91I	GGTNACC	1 cut(s)	775
EcoO109I	RGGNCCY	4 cut(s)	548, 1020, 1030, 1117
EcoO65I	GGTNACC	1 cut(s)	775
EcoRII	CCWGG	3 cut(s)	157, 586, 1564
EcoT14I	CCWWGG	2 cut(s)	406, 1320
EcoT22I	ATGCAT	1 cut(s)	1407
EcoT38I	GRGCYC	1 cut(s)	1023
ErhI	CCWWGG	2 cut(s)	406, 1320
FalI	AAGNNNNNCTT	4 cut(s)	313, 345, 348, 380
FaqI	GGGAC	3 cut(s)	1016, 1022, 1080
FauI	CCCGC	2 cut(s)	469, 1208
FauNDI	CATATG	2 cut(s)	289, 1059
FblI	GTMKAC	1 cut(s)	513
Fnu4HI	GCNGC	2 cut(s)	675, 846
FokI	GGATG	3 cut(s)	290, 411, 1545
FriOI	GRGCYC	1 cut(s)	1023
Fsp4HI	GCNGC	2 cut(s)	675, 846
FspBI	CTAG	5 cut(s)	23, 35, 861, 867, 1616
GlaI	GCGC	2 cut(s)	865, 1308
GluI	GCNGC	2 cut(s)	675, 846
GsuI	CTGGAG	2 cut(s)	1233, 1635
HaeII	RGCGCY	1 cut(s)	867
HaeIII	GGCC	7 cut(s)	531, 845, 980, 1008, 1021, 1119, 1385
HapII	CCGG	9 cut(s)	121, 315, 348, 394, 786, 1005, 1014, 1034, 1523
HgaI	GACGC	2 cut(s)	1066, 1339
HhaI	GCGC	2 cut(s)	866, 1309
Hin1I	GRCGYC	1 cut(s)	1077
Hin6I	GCGC	2 cut(s)	864, 1307
HinP1I	GCGC	2 cut(s)	864, 1307
HincII	GTYRAC	1 cut(s)	514
HindII	GTYRAC	1 cut(s)	514
HinfI	GANTC	5 cut(s)	124, 249, 1157, 1648, 1655
HpaII	CCGG	9 cut(s)	121, 315, 348, 394, 786, 1005, 1014, 1034, 1523
HphI	GGTGA	4 cut(s)	337, 649, 754, 994
Hpy166II	GTNNAC	5 cut(s)	94, 202, 514, 1051, 1222
Hpy188I	TCNGA	3 cut(s)	429, 792, 1529
Hpy188III	TCNNGA	9 cut(s)	700, 965, 1066, 1097, 1238, 1327, 1390, 1573, 1652
Hpy8I	GTNNAC	5 cut(s)	94, 202, 514, 1051, 1222
Hpy99I	CGWCG	3 cut(s)	770, 803, 1244
HpyAV	CCTTC	4 cut(s)	350, 454, 460, 521
HpyCH4III	ACNGT	7 cut(s)	106, 139, 403, 724, 1200, 1351, 1586
HpyCH4IV	ACGT	8 cut(s)	90, 204, 759, 768, 801, 1109, 1181, 1504
HpyCH4V	TGCA	7 cut(s)	68, 176, 269, 287, 677, 1405, 1582
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 44, 65, 117, 309, 737, 952, 1382, 1612
HpyF3I	CTNAG	2 cut(s)	10, 263
HpySE526I	ACGT	8 cut(s)	90, 204, 759, 768, 801, 1109, 1181, 1504
Hsp92I	GRCGYC	1 cut(s)	1077
HspAI	GCGC	2 cut(s)	864, 1307
KflI	GGGWCCC	1 cut(s)	1030
Kzo9I	GATC	5 cut(s)	436, 440, 592, 830, 1681
LguI	GCTCTTC	1 cut(s)	698
LmnI	GCTCC	4 cut(s)	396, 410, 757, 1173
Lsp1109I	GCAGC	1 cut(s)	661
LweI	GCATC	4 cut(s)	727, 915, 1392, 1414
MaeI	CTAG	5 cut(s)	23, 35, 861, 867, 1616
MaeII	ACGT	8 cut(s)	90, 204, 759, 768, 801, 1109, 1181, 1504
MaeIII	GTNAC	6 cut(s)	292, 760, 775, 808, 1066, 1505
MalI	GATC	5 cut(s)	438, 442, 594, 832, 1683
MbiI	CCGCTC	2 cut(s)	752, 1215
MboI	GATC	5 cut(s)	436, 440, 592, 830, 1681
MboII	GAAGA	3 cut(s)	536, 685, 688
MfeI	CAATTG	3 cut(s)	69, 1071, 1512
MflI	RGATCY	1 cut(s)	830
MhlI	GDGCHC	4 cut(s)	34, 415, 1023, 1170
MlsI	TGGCCA	1 cut(s)	1385
MluNI	TGGCCA	1 cut(s)	1385
MlyI	GAGTC	2 cut(s)	1166, 1642
MmeI	TCCRAC	1 cut(s)	1507
Mox20I	TGGCCA	1 cut(s)	1385
Mph1103I	ATGCAT	1 cut(s)	1407
MscI	TGGCCA	1 cut(s)	1385
MseI	TTAA	6 cut(s)	87, 209, 339, 629, 1464, 1482
MslI	CAYNNNNRTG	2 cut(s)	243, 767
Msp20I	TGGCCA	1 cut(s)	1385
MspI	CCGG	9 cut(s)	121, 315, 348, 394, 786, 1005, 1014, 1034, 1523
MspR9I	CCNGG	7 cut(s)	159, 315, 395, 588, 786, 1034, 1566
MunI	CAATTG	3 cut(s)	69, 1071, 1512
Mva1269I	GAATGC	2 cut(s)	79, 234
MvaI	CCWGG	3 cut(s)	159, 588, 1566
MvnI	CGCG	2 cut(s)	1142, 1307
MwoI	GCNNNNNNNGC	9 cut(s)	11, 44, 65, 117, 309, 737, 952, 1382, 1612
NciI	CCSGG	4 cut(s)	315, 395, 786, 1034
NcoI	CCATGG	1 cut(s)	406
NdeI	CATATG	2 cut(s)	289, 1059
NdeII	GATC	5 cut(s)	436, 440, 592, 830, 1681
NheI	GCTAGC	2 cut(s)	22, 860
NlaIV	GGNNCC	7 cut(s)	361, 392, 1021, 1022, 1031, 1032, 1038
NmuCI	GTSAC	2 cut(s)	760, 1066
NsiI	ATGCAT	1 cut(s)	1407
NspI	RCATGY	2 cut(s)	377, 1582
OliI	CACNNNNGTG	1 cut(s)	767
PaeI	GCATGC	1 cut(s)	377
PceI	AGGCCT	1 cut(s)	531
PciSI	GCTCTTC	1 cut(s)	698
PcsI	WCGNNNNNNNCGW	1 cut(s)	765
PctI	GAATGC	2 cut(s)	79, 234
PfeI	GAWTC	3 cut(s)	124, 249, 1655
Pfl23II	CGTACG	1 cut(s)	855
PfoI	TCCNGGA	1 cut(s)	157
PkrI	GCNGC	2 cut(s)	676, 847
Ple19I	CGATCG	1 cut(s)	439
PleI	GAGTC	2 cut(s)	1165, 1642
PmaCI	CACGTG	1 cut(s)	1110
PmlI	CACGTG	1 cut(s)	1110
PpsI	GAGTC	2 cut(s)	1165, 1642
Ppu21I	YACGTR	2 cut(s)	1110, 1505
PpuMI	RGGWCCY	2 cut(s)	548, 1030
PshAI	GACNNNNGTC	2 cut(s)	725, 1322
PshBI	ATTAAT	1 cut(s)	1464
Psp5II	RGGWCCY	2 cut(s)	548, 1030
Psp6I	CCWGG	3 cut(s)	157, 586, 1564
PspCI	CACGTG	1 cut(s)	1110
PspEI	GGTNACC	1 cut(s)	775
PspGI	CCWGG	3 cut(s)	157, 586, 1564
PspLI	CGTACG	1 cut(s)	855
PspN4I	GGNNCC	7 cut(s)	361, 392, 1021, 1022, 1031, 1032, 1038
PspOMI	GGGCCC	1 cut(s)	1019
PspPPI	RGGWCCY	2 cut(s)	548, 1030
PsuI	RGATCY	1 cut(s)	830
PvuI	CGATCG	1 cut(s)	439
RsaI	GTAC	2 cut(s)	497, 857
RsaNI	GTAC	2 cut(s)	496, 856
RseI	CAYNNNNRTG	2 cut(s)	243, 767
SalI	GTCGAC	1 cut(s)	512
SapI	GCTCTTC	1 cut(s)	698
SaqAI	TTAA	6 cut(s)	87, 209, 339, 629, 1464, 1482
SatI	GCNGC	2 cut(s)	675, 846
Sau3AI	GATC	5 cut(s)	436, 440, 592, 830, 1681
SchI	GAGTC	2 cut(s)	1166, 1642
ScrFI	CCNGG	7 cut(s)	159, 315, 395, 588, 786, 1034, 1566
SduI	GDGCHC	4 cut(s)	34, 415, 1023, 1170
SfaNI	GCATC	4 cut(s)	727, 915, 1392, 1414
SfcI	CTRYAG	1 cut(s)	138
SgrAI	CRCCGGYG	1 cut(s)	1013
SinI	GGWCC	6 cut(s)	161, 281, 548, 1030, 1036, 1643
SmiMI	CAYNNNNRTG	2 cut(s)	243, 767
SmlI	CTYRAG	1 cut(s)	1043
SmoI	CTYRAG	1 cut(s)	1043
SnaBI	TACGTA	1 cut(s)	1505
SphI	GCATGC	1 cut(s)	377
SseBI	AGGCCT	1 cut(s)	531
SsiI	CCGC	8 cut(s)	275, 462, 750, 780, 846, 1140, 1215, 1496
SspMI	CTAG	5 cut(s)	23, 35, 861, 867, 1616
StuI	AGGCCT	1 cut(s)	531
StyD4I	CCNGG	7 cut(s)	157, 313, 393, 586, 784, 1032, 1564
StyI	CCWWGG	2 cut(s)	406, 1320
TaaI	ACNGT	7 cut(s)	106, 139, 403, 724, 1200, 1351, 1586
TaiI	ACGT	8 cut(s)	93, 207, 762, 771, 804, 1112, 1184, 1507
TaqI	TCGA	9 cut(s)	439, 513, 735, 893, 1287, 1316, 1346, 1389, 1488
TaqII	GACCGA	1 cut(s)	1660
TauI	GCSGC	1 cut(s)	848
TfiI	GAWTC	3 cut(s)	124, 249, 1655
Tru1I	TTAA	6 cut(s)	87, 209, 339, 629, 1464, 1482
Tru9I	TTAA	6 cut(s)	87, 209, 339, 629, 1464, 1482
TscAI	CASTG	3 cut(s)	245, 1031, 1589
TseFI	GTSAC	2 cut(s)	760, 1066
TseI	GCWGC	1 cut(s)	674
Tsp45I	GTSAC	2 cut(s)	760, 1066
TspDTI	ATGAA	3 cut(s)	1163, 1415, 1589
TspGWI	ACGGA	2 cut(s)	843, 1283
TspRI	CASTG	3 cut(s)	245, 1031, 1589
VpaK11BI	GGWCC	6 cut(s)	161, 281, 548, 1030, 1036, 1643
VspI	ATTAAT	1 cut(s)	1464
XapI	RAATTY	2 cut(s)	335, 1478
XceI	RCATGY	2 cut(s)	377, 1582
XmiI	GTMKAC	1 cut(s)	513
XspI	CTAG	5 cut(s)	23, 35, 861, 867, 1616
Zsp2I	ATGCAT	1 cut(s)	1407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.