Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Reverse (-)

7501544 .. 7504444

Gene Structure 2901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g12430.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGCGCGCTTTGTCTTTGCGCTAGCGTGTGCCCTAGCTCTGCTGGCTTCTTCAGTAGCCTCTGCTGCAATAGTCGAGCAATCTTTCAACGTGAATAACCTGACTGTTACACGGCTGTGCCAAAATCAACTGATAACCGCCGTTAATGGGCAGTATCCAGGTCCAACAATAAGGGCAAGAGAGGGTGACACTCTTGTCGTTCACGTCCTGAACCAGTCCCCCTACAACCTTACTATTCATTGGCACGGTATCTTTCAGCTTCTAAGTGCATGGGCAGATGGACCTGCATATGTAACCCAGTGCCCTATACTTCCTGGAAATAGCTACACGTACAGATTCAACATCACCGGACAGGAAGGTACTCTCTGGTGGCATGCGCATGTTTCATGGCTCCGTGCAACTGTCTATGGCGCCCTCATAATCCACCCAAGATCCAATCGATCCTACCCCTTCGCTGCACCCTTCCAGGACGTACCGATTATGTTAGGAGAGTGGTGGAATGCTAATGTCGTCGACGTTGAGAATCAAGGACTAGCCACCGGAGGTGCTCCCAACAATTCCGATGCTTACACGATCAATGGATTACCCGGCGACTTCTATAATTGCTCTCAAAACCAGACATATAAGCTGAATGTGGTGAGGGGAAAGACATACATGCTACGCATAATCAACGCTGCACTCAATAACCAACTCTTCTTCGGCATAGCCAAACACAACATGACCGTGGTAGCCGTCGATGCCTCCTACACCAAACCCTACGTCACAGAAGTCGTCTTGGTCGCACCGGGGCAGACCACCGACGTTCTCATCACCGCCAACCAGCCCGTCGGGTCGTACTACATGGCCGCCACTCCATACGCTAGTGCAGCCATACCATTTCCTAACACAACCACACGCGGTGTCCTATTATACAACGGCTACAATTCCTCGAGCGCTCCTCTCATGCCTGCCCTTCCCAATCCCCGTGACACGTCAACGGCACATAGATTCTCCAGCAACCTGACGGGGCTAGCCGGCGGGCCTCAGTGGGTTCCGGTTCCGCTCCAGGTAGACGAGCATATGTTCGTGACAATAGGTGTAAATCTGGATGTATGTGCCGAGGGTATGACATGTCAAGGTCCCCTTAACAACAGATTGTCCGCGAGCATGAACAACGAATCCTTCCAGCTCCCTACAACACTCTCAATGCTAGAAGCATCAGTTTACAACGTGAGCGGGATTTACACCACCGATTTCCCCGATAATCCTCCGGTGGAGTTCGACTACACGAACGCGAACATCAGCCTGGACCTAAACCTGATCTTCGCCCCGAAATCTACCAAGGTCAAGAAGTTGAAGTACAACTCGACCGTGGAGATCGTGCTGCAGAACACGGCCTTTTTAGCGATCGAGAATCACCCTATTCATCTTCATGGTTTCAACTTCCACGTATTAGCTCAAGGGTTTGGAAACTATGACTCCGTTAACGATAGCAAGAACTTCAATCTTGTCGACCCACAACTGCGTAACACAATTGGTGTTCCGGTCGGAGGATGGGCGGTGATCAGATTTCAAGCTAATAATCCAGGTGTATGGATGATGCATTGTCATCTGGACGTGCACTTGCCATGGGGTCTGGCCATGGCGTTTGAGGTGGAAAATGGATCGACTCCTTCATCTACTCTGCCTCCACCACCACTTGATCTACCGAAATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

61.79

Weight (kDa)

6.03

Isoelectric Point (pI)

32.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	31 - 145	2.2e-42	Multicopper oxidase
Cu-oxidase	PF00394	157 - 306	1.7e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	411 - 548	2.5e-43	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
Acc16I	TGCGCA	1 cut(s)	378
Acc36I	ACCTGC	1 cut(s)	292
AccB1I	GGYRCC	1 cut(s)	410
AccBSI	CCGCTC	2 cut(s)	1042, 1215
AccI	GTMKAC	3 cut(s)	513, 1050, 1491
AccII	CGCG	4 cut(s)	7, 897, 1142, 1274
AciI	CCGC	9 cut(s)	138, 813, 846, 897, 1017, 1040, 1140, 1215, 1538
AclWI	GGATC	3 cut(s)	426, 435, 1651
AcoI	YGGCCR	2 cut(s)	843, 1617
AcuI	CTGAAG	1 cut(s)	36
AcyI	GRCGYC	1 cut(s)	411
AdeI	CACNNNGTG	1 cut(s)	899
AfaI	GTAC	5 cut(s)	332, 361, 474, 836, 1340
AfeI	AGCGCT	1 cut(s)	934
AfiI	CCNNNNNNNGG	2 cut(s)	147, 1529
AflIII	ACRYGT	3 cut(s)	327, 969, 1109
AgsI	TTSAA	6 cut(s)	88, 340, 1336, 1420, 1483, 1553
AjiI	CACGTC	3 cut(s)	205, 972, 1597
AjnI	CCWGG	6 cut(s)	157, 313, 465, 1044, 1284, 1564
AleI	CACNNNNGTG	1 cut(s)	115
AloI	GAACNNNNNNTCC	2 cut(s)	1142, 1174
AluBI	AGCT	7 cut(s)	38, 259, 324, 628, 1168, 1436, 1556
AluI	AGCT	7 cut(s)	38, 259, 324, 628, 1168, 1436, 1556
Alw21I	GWGCWC	2 cut(s)	550, 1602
Alw44I	GTGCAC	1 cut(s)	1598
AlwI	GGATC	3 cut(s)	426, 435, 1651
Ama87I	CYCGRG	1 cut(s)	928
Aor51HI	AGCGCT	1 cut(s)	934
AoxI	GGCC	4 cut(s)	843, 1019, 1374, 1617
ApaLI	GTGCAC	1 cut(s)	1598
ApeKI	GCWGC	5 cut(s)	65, 455, 674, 866, 1363
ArsI	GACNNNNNNTTYG	2 cut(s)	744, 776
AspLEI	GCGC	6 cut(s)	7, 9, 22, 379, 413, 935
AspS9I	GGNCC	5 cut(s)	161, 281, 1019, 1118, 1288
AsuC2I	CCSGG	2 cut(s)	588, 786
AsuHPI	GGTGA	6 cut(s)	197, 337, 649, 802, 1388, 1552
AsuNHI	GCTAGC	2 cut(s)	22, 1009
AvaI	CYCGRG	1 cut(s)	928
AvaII	GGWCC	4 cut(s)	161, 281, 1118, 1288
BaeGI	GKGCMC	3 cut(s)	34, 305, 1602
BalI	TGGCCA	1 cut(s)	1619
BanI	GGYRCC	1 cut(s)	410
BarI	GAAGNNNNNNTAC	2 cut(s)	1322, 1354
Bbv12I	GWGCWC	2 cut(s)	550, 1602
BbvI	GCAGC	5 cut(s)	52, 442, 661, 878, 1350
BccI	CCATC	2 cut(s)	272, 1527
BceAI	ACGGC	6 cut(s)	125, 128, 716, 931, 993, 1389
BciT130I	CCWGG	6 cut(s)	159, 315, 467, 1046, 1286, 1566
BciVI	GTATCC	1 cut(s)	165
BclI	TGATCA	1 cut(s)	1542
BcnI	CCSGG	2 cut(s)	588, 786
BfaI	CTAG	6 cut(s)	23, 35, 533, 861, 1010, 1190
BfmI	CTRYAG	1 cut(s)	1364
BfoI	RGCGCY	2 cut(s)	414, 936
BfuAI	ACCTGC	1 cut(s)	292
BfuI	GTATCC	1 cut(s)	165
BisI	GCNGC	6 cut(s)	66, 456, 675, 846, 867, 1364
BlsI	GCNGC	6 cut(s)	67, 457, 676, 847, 868, 1365
Bme1390I	CCNGG	8 cut(s)	159, 315, 467, 588, 786, 1046, 1286, 1566
Bme18I	GGWCC	4 cut(s)	161, 281, 1118, 1288
BmeT110I	CYCGRG	1 cut(s)	928
BmgBI	CACGTC	3 cut(s)	205, 972, 1597
BmgT120I	GGNCC	5 cut(s)	161, 281, 1019, 1118, 1288
BmiI	GGNNCC	5 cut(s)	392, 412, 1032, 1038, 1120
BmrFI	CCNGG	8 cut(s)	159, 315, 467, 588, 786, 1046, 1286, 1566
BmrI	ACTGGG	1 cut(s)	292
BmsI	GCATC	4 cut(s)	553, 727, 1205, 1569
BmtI	GCTAGC	2 cut(s)	26, 1013
BmuI	ACTGGG	1 cut(s)	292
BplI	GAGNNNNNCTC	2 cut(s)	922, 954
BpmI	CTGGAG	2 cut(s)	976, 1028
BpuEI	CTTGAG	1 cut(s)	1422
BpuMI	CCSGG	2 cut(s)	588, 786
Bsa29I	ATCGAT	1 cut(s)	439
BsaAI	YACGTR	2 cut(s)	330, 1429
BsaHI	GRCGYC	1 cut(s)	411
BsaJI	CCNNGG	7 cut(s)	723, 785, 1098, 1320, 1350, 1607, 1620
BsaWI	WCCGGW	5 cut(s)	347, 539, 1033, 1249, 1522
BsaXI	ACNNNNNCTCC	4 cut(s)	1442, 1472, 1651, 1681
Bsc4I	CCNNNNNNNGG	2 cut(s)	147, 1529
Bse118I	RCCGGY	1 cut(s)	1013
Bse1I	ACTGG	2 cut(s)	214, 298
BseBI	CCWGG	6 cut(s)	159, 315, 467, 1046, 1286, 1566
BseCI	ATCGAT	1 cut(s)	439
BseDI	CCNNGG	7 cut(s)	723, 785, 1098, 1320, 1350, 1607, 1620
BseGI	GGATG	3 cut(s)	1093, 1538, 1581
BseLI	CCNNNNNNNGG	2 cut(s)	147, 1529
BseMII	CTCAG	1 cut(s)	1037
BseNI	ACTGG	2 cut(s)	214, 298
BsePI	GCGCGC	1 cut(s)	5
BseRI	GAGGAG	1 cut(s)	927
BseSI	GKGCMC	3 cut(s)	34, 305, 1602
BseXI	GCAGC	5 cut(s)	52, 442, 661, 878, 1350
BsgI	GTGCAG	3 cut(s)	441, 660, 885
Bsh1236I	CGCG	4 cut(s)	7, 897, 1142, 1274
Bsh1285I	CGRYCG	3 cut(s)	1350, 1389, 1527
BshFI	GGCC	4 cut(s)	845, 1021, 1376, 1619
BshNI	GGYRCC	1 cut(s)	410
BshVI	ATCGAT	1 cut(s)	439
BsiEI	CGRYCG	3 cut(s)	1350, 1389, 1527
BsiHKAI	GWGCWC	2 cut(s)	550, 1602
BsiHKCI	CYCGRG	1 cut(s)	928
BsiSI	CCGG	8 cut(s)	348, 540, 588, 785, 1014, 1034, 1250, 1523
BslFI	GGGAC	2 cut(s)	202, 1104
BslI	CCNNNNNNNGG	2 cut(s)	147, 1529
BsmFI	GGGAC	2 cut(s)	202, 1104
BsmI	GAATGC	1 cut(s)	505
BsnI	GGCC	4 cut(s)	845, 1021, 1376, 1619
BsoBI	CYCGRG	1 cut(s)	928
Bsp1286I	GDGCHC	4 cut(s)	34, 305, 550, 1602
Bsp143I	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
Bsp19I	CCATGG	2 cut(s)	1607, 1620
BspACI	CCGC	9 cut(s)	138, 813, 846, 897, 1017, 1040, 1140, 1215, 1538
BspANI	GGCC	4 cut(s)	845, 1021, 1376, 1619
BspCNI	CTCAG	1 cut(s)	1036
BspDI	ATCGAT	1 cut(s)	439
BspFNI	CGCG	4 cut(s)	7, 897, 1142, 1274
BspLI	GGNNCC	5 cut(s)	392, 412, 1032, 1038, 1120
BspMAI	CTGCAG	1 cut(s)	1368
BspMI	ACCTGC	1 cut(s)	292
BspOI	GCTAGC	2 cut(s)	26, 1013
BspPI	GGATC	3 cut(s)	426, 435, 1651
BspT107I	GGYRCC	1 cut(s)	410
BsrBI	CCGCTC	2 cut(s)	1042, 1215
BsrFI	RCCGGY	1 cut(s)	1013
BsrI	ACTGG	2 cut(s)	214, 298
BssAI	RCCGGY	1 cut(s)	1013
BssECI	CCNNGG	7 cut(s)	723, 785, 1098, 1320, 1350, 1607, 1620
BssHII	GCGCGC	1 cut(s)	5
BssMI	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
BssNI	GRCGYC	1 cut(s)	411
BssT1I	CCWWGG	3 cut(s)	1320, 1607, 1620
Bst2UI	CCWGG	6 cut(s)	159, 315, 467, 1046, 1286, 1566
Bst4CI	ACNGT	5 cut(s)	106, 248, 403, 724, 1351
Bst6I	CTCTTC	1 cut(s)	698
BstACI	GRCGYC	1 cut(s)	411
BstBAI	YACGTR	2 cut(s)	330, 1429
BstC8I	GCNNGC	9 cut(s)	7, 24, 45, 375, 948, 1011, 1015, 1019, 1144
BstDEI	CTNAG	2 cut(s)	263, 1023
BstDSI	CCRYGG	4 cut(s)	723, 1350, 1607, 1620
BstF5I	GGATG	3 cut(s)	1093, 1538, 1581
BstFNI	CGCG	4 cut(s)	7, 897, 1142, 1274
BstH2I	RGCGCY	2 cut(s)	414, 936
BstHHI	GCGC	6 cut(s)	7, 9, 22, 379, 413, 935
BstKTI	GATC	9 cut(s)	434, 443, 576, 1302, 1359, 1389, 1545, 1646, 1684
BstMBI	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
BstMCI	CGRYCG	3 cut(s)	1350, 1389, 1527
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 65, 737, 866, 1382
BstNI	CCWGG	6 cut(s)	159, 315, 467, 1046, 1286, 1566
BstNSI	RCATGY	4 cut(s)	377, 383, 658, 1113
BstSCI	CCNGG	8 cut(s)	157, 313, 465, 586, 784, 1044, 1284, 1564
BstSFI	CTRYAG	1 cut(s)	1364
BstSLI	GKGCMC	3 cut(s)	34, 305, 1602
BstUI	CGCG	4 cut(s)	7, 897, 1142, 1274
BstV1I	GCAGC	5 cut(s)	52, 442, 661, 878, 1350
BstX2I	RGATCY	1 cut(s)	431
BstXI	CCANNNNNNTGG	1 cut(s)	1572
BstYI	RGATCY	1 cut(s)	431
Bsu15I	ATCGAT	1 cut(s)	439
BsuI	GTATCC	1 cut(s)	165
BsuRI	GGCC	4 cut(s)	845, 1021, 1376, 1619
BsuTUI	ATCGAT	1 cut(s)	439
BtgI	CCRYGG	4 cut(s)	723, 1350, 1607, 1620
BtrI	CACGTC	3 cut(s)	205, 972, 1597
BtsCI	GGATG	3 cut(s)	1093, 1538, 1581
BtsIMutI	CAGTG	2 cut(s)	305, 1031
BveI	ACCTGC	1 cut(s)	292
Cac8I	GCNNGC	9 cut(s)	7, 24, 45, 375, 948, 1011, 1015, 1019, 1144
CfoI	GCGC	6 cut(s)	7, 9, 22, 379, 413, 935
Cfr10I	RCCGGY	1 cut(s)	1013
Cfr13I	GGNCC	5 cut(s)	161, 281, 1019, 1118, 1288
ClaI	ATCGAT	1 cut(s)	439
Csp6I	GTAC	5 cut(s)	331, 360, 473, 835, 1339
CviQI	GTAC	5 cut(s)	331, 360, 473, 835, 1339
DdeI	CTNAG	2 cut(s)	263, 1023
DinI	GGCGCC	1 cut(s)	412
DpnI	GATC	9 cut(s)	433, 442, 575, 1301, 1358, 1388, 1544, 1645, 1683
DpnII	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
DraIII	CACNNNGTG	1 cut(s)	899
DrdI	GACNNNNNNGTC	1 cut(s)	194
DseDI	GACNNNNNNGTC	1 cut(s)	194
EaeI	YGGCCR	2 cut(s)	843, 1617
Eam1104I	CTCTTC	1 cut(s)	698
EarI	CTCTTC	1 cut(s)	698
Eco130I	CCWWGG	3 cut(s)	1320, 1607, 1620
Eco47I	GGWCC	4 cut(s)	161, 281, 1118, 1288
Eco47III	AGCGCT	1 cut(s)	934
Eco57I	CTGAAG	1 cut(s)	36
Eco88I	CYCGRG	1 cut(s)	928
EcoO109I	RGGNCCY	1 cut(s)	1118
EcoRII	CCWGG	6 cut(s)	157, 313, 465, 1044, 1284, 1564
EcoT14I	CCWWGG	3 cut(s)	1320, 1607, 1620
EcoT22I	ATGCAT	1 cut(s)	1584
EgeI	GGCGCC	1 cut(s)	412
EheI	GGCGCC	1 cut(s)	412
ErhI	CCWWGG	3 cut(s)	1320, 1607, 1620
FalI	AAGNNNNNCTT	2 cut(s)	1107, 1139
FaqI	GGGAC	2 cut(s)	202, 1104
FauI	CCCGC	2 cut(s)	1010, 1208
FauNDI	CATATG	2 cut(s)	289, 1059
FbaI	TGATCA	1 cut(s)	1542
FblI	GTMKAC	3 cut(s)	513, 1050, 1491
Fnu4HI	GCNGC	6 cut(s)	66, 456, 675, 846, 867, 1364
FokI	GGATG	3 cut(s)	1100, 1545, 1588
Fsp4HI	GCNGC	6 cut(s)	66, 456, 675, 846, 867, 1364
FspAI	RTGCGCAY	1 cut(s)	378
FspBI	CTAG	6 cut(s)	23, 35, 533, 861, 1010, 1190
FspI	TGCGCA	1 cut(s)	378
GlaI	GCGC	6 cut(s)	6, 8, 21, 378, 412, 934
GluI	GCNGC	6 cut(s)	66, 456, 675, 846, 867, 1364
GsuI	CTGGAG	2 cut(s)	976, 1028
HaeII	RGCGCY	2 cut(s)	414, 936
HaeIII	GGCC	4 cut(s)	845, 1021, 1376, 1619
HapII	CCGG	8 cut(s)	348, 540, 588, 785, 1014, 1034, 1250, 1523
HhaI	GCGC	6 cut(s)	7, 9, 22, 379, 413, 935
Hin1I	GRCGYC	1 cut(s)	411
Hin6I	GCGC	6 cut(s)	5, 7, 20, 377, 411, 933
HinP1I	GCGC	6 cut(s)	5, 7, 20, 377, 411, 933
HincII	GTYRAC	4 cut(s)	514, 975, 1465, 1492
HindII	GTYRAC	4 cut(s)	514, 975, 1465, 1492
HinfI	GANTC	7 cut(s)	336, 523, 987, 1157, 1393, 1457, 1648
HpaI	GTTAAC	1 cut(s)	1465
HpaII	CCGG	8 cut(s)	348, 540, 588, 785, 1014, 1034, 1250, 1523
HphI	GGTGA	6 cut(s)	197, 337, 649, 802, 1388, 1552
Hpy166II	GTNNAC	8 cut(s)	202, 514, 975, 1051, 1204, 1465, 1492, 1600
Hpy188I	TCNGA	3 cut(s)	562, 1529, 1547
Hpy188III	TCNNGA	6 cut(s)	208, 1066, 1085, 1327, 1390, 1592
Hpy8I	GTNNAC	8 cut(s)	202, 514, 975, 1051, 1204, 1465, 1492, 1600
Hpy99I	CGWCG	5 cut(s)	515, 518, 737, 803, 830
HpyAV	CCTTC	6 cut(s)	350, 460, 472, 962, 1171, 1662
HpyCH4III	ACNGT	5 cut(s)	106, 248, 403, 724, 1351
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 65, 737, 866, 1382
HpyF3I	CTNAG	2 cut(s)	263, 1023
Hsp92I	GRCGYC	1 cut(s)	411
HspAI	GCGC	6 cut(s)	5, 7, 20, 377, 411, 933
KasI	GGCGCC	1 cut(s)	410
KroI	GCCGGC	1 cut(s)	1013
KroNI	GCCGGC	1 cut(s)	1015
Ksp22I	TGATCA	1 cut(s)	1542
KspAI	GTTAAC	1 cut(s)	1465
Kzo9I	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
LmnI	GCTCC	5 cut(s)	396, 553, 940, 1047, 1173
Lsp1109I	GCAGC	5 cut(s)	52, 442, 661, 878, 1350
LweI	GCATC	4 cut(s)	553, 727, 1205, 1569
MaeI	CTAG	6 cut(s)	23, 35, 533, 861, 1010, 1190
MaeIII	GTNAC	7 cut(s)	106, 185, 292, 760, 965, 1066, 1505
MalI	GATC	9 cut(s)	433, 442, 575, 1301, 1358, 1388, 1544, 1645, 1683
MbiI	CCGCTC	2 cut(s)	1042, 1215
MboI	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
MboII	GAAGA	5 cut(s)	42, 685, 688, 1294, 1400
MfeI	CAATTG	1 cut(s)	1512
MflI	RGATCY	1 cut(s)	431
MhlI	GDGCHC	4 cut(s)	34, 305, 550, 1602
MlsI	TGGCCA	1 cut(s)	1619
MluCI	AATT	4 cut(s)	556, 601, 922, 1512
MluNI	TGGCCA	1 cut(s)	1619
Mly113I	GGCGCC	1 cut(s)	411
MlyI	GAGTC	2 cut(s)	1451, 1642
MmeI	TCCRAC	2 cut(s)	188, 1507
Mox20I	TGGCCA	1 cut(s)	1619
Mph1103I	ATGCAT	1 cut(s)	1584
MroNI	GCCGGC	1 cut(s)	1013
MscI	TGGCCA	1 cut(s)	1619
MseI	TTAA	4 cut(s)	144, 1125, 1464, 1696
MslI	CAYNNNNRTG	4 cut(s)	115, 378, 722, 1410
Msp20I	TGGCCA	1 cut(s)	1619
MspI	CCGG	8 cut(s)	348, 540, 588, 785, 1014, 1034, 1250, 1523
MspR9I	CCNGG	8 cut(s)	159, 315, 467, 588, 786, 1046, 1286, 1566
MunI	CAATTG	1 cut(s)	1512
Mva1269I	GAATGC	1 cut(s)	505
MvaI	CCWGG	6 cut(s)	159, 315, 467, 1046, 1286, 1566
MvnI	CGCG	4 cut(s)	7, 897, 1142, 1274
MwoI	GCNNNNNNNGC	5 cut(s)	44, 65, 737, 866, 1382
NaeI	GCCGGC	1 cut(s)	1015
NarI	GGCGCC	1 cut(s)	411
NciI	CCSGG	2 cut(s)	588, 786
NcoI	CCATGG	2 cut(s)	1607, 1620
NdeI	CATATG	2 cut(s)	289, 1059
NdeII	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
NgoMIV	GCCGGC	1 cut(s)	1013
NheI	GCTAGC	2 cut(s)	22, 1009
NlaIV	GGNNCC	5 cut(s)	392, 412, 1032, 1038, 1120
NmeAIII	GCCGAG	1 cut(s)	1123
NmuCI	GTSAC	4 cut(s)	185, 760, 965, 1066
NsbI	TGCGCA	1 cut(s)	378
NsiI	ATGCAT	1 cut(s)	1584
NspI	RCATGY	4 cut(s)	377, 383, 658, 1113
OliI	CACNNNNGTG	1 cut(s)	115
PaeI	GCATGC	1 cut(s)	377
PaeR7I	CTCGAG	1 cut(s)	928
PauI	GCGCGC	1 cut(s)	5
PciI	ACATGT	1 cut(s)	1109
PctI	GAATGC	1 cut(s)	505
PdiI	GCCGGC	1 cut(s)	1015
PfeI	GAWTC	5 cut(s)	336, 523, 987, 1157, 1393
PfoI	TCCNGGA	2 cut(s)	313, 465
PkrI	GCNGC	6 cut(s)	67, 457, 676, 847, 868, 1365
Ple19I	CGATCG	1 cut(s)	1389
PleI	GAGTC	2 cut(s)	1451, 1642
PluTI	GGCGCC	1 cut(s)	414
PpsI	GAGTC	2 cut(s)	1451, 1642
Ppu21I	YACGTR	2 cut(s)	330, 1429
PpuMI	RGGWCCY	1 cut(s)	1118
PscI	ACATGT	1 cut(s)	1109
Psp5II	RGGWCCY	1 cut(s)	1118
Psp6I	CCWGG	6 cut(s)	157, 313, 465, 1044, 1284, 1564
PspGI	CCWGG	6 cut(s)	157, 313, 465, 1044, 1284, 1564
PspN4I	GGNNCC	5 cut(s)	392, 412, 1032, 1038, 1120
PspPI	GGNCC	5 cut(s)	161, 281, 1019, 1118, 1288
PspPPI	RGGWCCY	1 cut(s)	1118
PspXI	VCTCGAGB	1 cut(s)	928
PstI	CTGCAG	1 cut(s)	1368
PsuI	RGATCY	1 cut(s)	431
PteI	GCGCGC	1 cut(s)	5
PvuI	CGATCG	1 cut(s)	1389
RsaI	GTAC	5 cut(s)	332, 361, 474, 836, 1340
RsaNI	GTAC	5 cut(s)	331, 360, 473, 835, 1339
RseI	CAYNNNNRTG	4 cut(s)	115, 378, 722, 1410
SalI	GTCGAC	2 cut(s)	512, 1490
SaqAI	TTAA	4 cut(s)	144, 1125, 1464, 1696
SatI	GCNGC	6 cut(s)	66, 456, 675, 846, 867, 1364
Sau3AI	GATC	9 cut(s)	431, 440, 573, 1299, 1356, 1386, 1542, 1643, 1681
Sau96I	GGNCC	5 cut(s)	161, 281, 1019, 1118, 1288
SchI	GAGTC	2 cut(s)	1451, 1642
ScrFI	CCNGG	8 cut(s)	159, 315, 467, 588, 786, 1046, 1286, 1566
SduI	GDGCHC	4 cut(s)	34, 305, 550, 1602
SfaNI	GCATC	4 cut(s)	553, 727, 1205, 1569
SfcI	CTRYAG	1 cut(s)	1364
SfoI	GGCGCC	1 cut(s)	412
Sfr274I	CTCGAG	1 cut(s)	928
SgrDI	CGTCGACG	1 cut(s)	512
SinI	GGWCC	4 cut(s)	161, 281, 1118, 1288
SlaI	CTCGAG	1 cut(s)	928
SmiMI	CAYNNNNRTG	4 cut(s)	115, 378, 722, 1410
SmlI	CTYRAG	2 cut(s)	928, 1437
SmoI	CTYRAG	2 cut(s)	928, 1437
SphI	GCATGC	1 cut(s)	377
Sse9I	AATT	4 cut(s)	556, 601, 922, 1512
SsiI	CCGC	9 cut(s)	138, 813, 846, 897, 1017, 1040, 1140, 1215, 1538
SspDI	GGCGCC	1 cut(s)	410
SspMI	CTAG	6 cut(s)	23, 35, 533, 861, 1010, 1190
StyD4I	CCNGG	8 cut(s)	157, 313, 465, 586, 784, 1044, 1284, 1564
StyI	CCWWGG	3 cut(s)	1320, 1607, 1620
TaaI	ACNGT	5 cut(s)	106, 248, 403, 724, 1351
TasI	AATT	4 cut(s)	556, 601, 922, 1512
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	1 cut(s)	848
TfiI	GAWTC	5 cut(s)	336, 523, 987, 1157, 1393
Tru1I	TTAA	4 cut(s)	144, 1125, 1464, 1696
Tru9I	TTAA	4 cut(s)	144, 1125, 1464, 1696
TscAI	CASTG	2 cut(s)	305, 1031
TseFI	GTSAC	4 cut(s)	185, 760, 965, 1066
TseI	GCWGC	5 cut(s)	65, 455, 674, 866, 1363
Tsp45I	GTSAC	4 cut(s)	185, 760, 965, 1066
TspDTI	ATGAA	6 cut(s)	227, 375, 1163, 1394, 1400, 1644
TspGWI	ACGGA	2 cut(s)	383, 1450
TspRI	CASTG	2 cut(s)	305, 1031
VneI	GTGCAC	1 cut(s)	1598
VpaK11BI	GGWCC	4 cut(s)	161, 281, 1118, 1288
XceI	RCATGY	4 cut(s)	377, 383, 658, 1113
XhoI	CTCGAG	1 cut(s)	928
XmiI	GTMKAC	3 cut(s)	513, 1050, 1491
XspI	CTAG	6 cut(s)	23, 35, 533, 861, 1010, 1190
Zsp2I	ATGCAT	1 cut(s)	1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.