Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Forward (+)

38499347 .. 38502180

Gene Structure 2834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024714

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGCGCGCTTTGCCTTTGCGCTAGCATGTGCCCTGGCTTTGTTGGCTTCTTCAGTAGCCTCTGCTGCAATAGTCGAGCATTCTTTTCATGTGAATAACTTGACTGTTACGCGGCTATGCAATAATCAACTGATAACCGCAGTTAATGGGGAGTATCCAGGTCCAACAATAAGGGCAAGAGAGGGTGACACTCTTGTTGTTCACGTCTTGAACCAGTCCCCCTATAACATTACTATTCATTGGCATGGGATCTTTCAGCTTCTAAGTGCATGGGCAGATGGACCTGCATATGTAACCCAGTGCCCTATACTTCCTGGACAAAACTATACCTACAGATTCAATATCACCGGACAAGAAGGTACTCTCTGGTGGCATGCACACTTTTCATGGCTCCGTGCAACAGTCTATGGCGCCCTCATAATCCACCCGAGATCCACTCTATCCTACCCATTCCCTAAACCATACCAGGACGTACCGATTATGTTAGGAGAGTGGTGGAATGCTAGTGTCGTTGACGTTGAGAATCAAGCACAAGCCACCGGAGGTGCTCCGGAGGATTCTGATGCATACACGATCAATGGACTACCTGGCGACTTTTATAATTGCTCTCAAAATCAGACATATGAGCTGAATGTGGTGAGGGGAAAGACCTACATGCTGCGCATAATCAACGCTGCACTCAATACCCAGTTCTTCTTCGGCATAGCCAATCACAGCATGACAGTTGTAGCGGTCGACGCCTCCTACACCAAACCATACGTCACAGAAGTCGTCGTGGTCGCGCCAGGTCAGACCACCGATGTTCTCATCACCGCCAACCAGTCCATCGGATCTTACTACATGGCCGCCACTCCTTACGCTAGCTCAGTCATACCGTTTCCTAACACGACCACACGCGGAGTCCTCGTCTACAACGGCTCCAAGTCATCGAGCGCCCCGCTCATGCCTGCCCTACCTAATCCTCAAGACACGGCAACGGCCCATAAATTCAACAGCAATCTGACGGGGCTAGCCGGTGGGCCCCAGTGGGTGCCGGTTCCGCTCACGGTGGACGAGCACATGTTCGTGACAGTAGGTGTGAATCTGGATAAATGTGCCGAAGGTGTCACATGTCAAGGTCCACTTAACAACAGATTGTCCGCGAGCATGAACAACGAGTCCTTCCAGCTGCCTACAACACTGTCAATTCAACAAGCATCCTTTTACAACGTGAGCGGGATTTACACCACCGATTTTCCCGACAATCCTCCGGTCGAGTTTGACTACACGAACGAAAACATCAGCCTGAACCTAGATCTGATCTTCGCTCCAAAATCTACCAAAGTCAAGAAGTTGAAGTACAACTCAACTGTAGAGATCGTGCTGCAGAACACGGCGTTTATAGCGATCGAGAATCACCCTATTCATATTCATGGTTTCAACTTCCACGTATTAGCTCAAGGTTTTGGAAATTATGACCCCATTAACGATAGCAAGAAATTCAATCTTGTTAACCCACAAATTCGTAACACAATTGGTGTTCCAGTCGGAGGATGGGCGGTGATCAGATTTCAAGCAAATAATCCAGGTGTATGGATGGCGCATTGTCACCTGGACGTGCACTTGCCCTGGGGTCTGGCCATGGCTTTTGAGGTTGAAAATGGACCAACTGTTGCATCTACTTTGCCTCCGCCACCGCTCGATCTACCCAAATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

61.86

Weight (kDa)

5.87

Isoelectric Point (pI)

32.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	31 - 145	2e-42	Multicopper oxidase
Cu-oxidase	PF00394	157 - 307	6.6e-45	Multicopper oxidase
Cu-oxidase_2	PF07731	411 - 547	3.9e-42	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	600
Acc16I	TGCGCA	1 cut(s)	662
Acc36I	ACCTGC	1 cut(s)	292
AccB1I	GGYRCC	2 cut(s)	410, 1030
AccBSI	CCGCTC	4 cut(s)	940, 1042, 1215, 1678
AccI	GTMKAC	2 cut(s)	735, 909
AccII	CGCG	5 cut(s)	7, 112, 782, 897, 1142
AccIII	TCCGGA	1 cut(s)	550
AclWI	GGATC	3 cut(s)	257, 426, 838
AcoI	YGGCCR	2 cut(s)	843, 1617
AcsI	RAATTY	3 cut(s)	986, 1478, 1500
AcuI	CTGAAG	1 cut(s)	36
AcyI	GRCGYC	2 cut(s)	411, 738
AfaI	GTAC	3 cut(s)	361, 474, 1340
AfiI	CCNNNNNNNGG	1 cut(s)	1529
AflIII	ACRYGT	2 cut(s)	1059, 1109
AgsI	TTSAA	9 cut(s)	211, 340, 991, 1190, 1336, 1420, 1483, 1553, 1637
AjiI	CACGTC	2 cut(s)	205, 1597
AjnI	CCWGG	9 cut(s)	33, 157, 313, 465, 586, 784, 1564, 1590, 1607
AloI	GAACNNNNNNTCC	2 cut(s)	1142, 1174
AluBI	AGCT	5 cut(s)	259, 628, 864, 1168, 1436
AluI	AGCT	5 cut(s)	259, 628, 864, 1168, 1436
Alw21I	GWGCWC	3 cut(s)	550, 1059, 1602
Alw44I	GTGCAC	1 cut(s)	1598
AlwI	GGATC	3 cut(s)	257, 426, 838
Ama87I	CYCGRG	1 cut(s)	427
Aor13HI	TCCGGA	1 cut(s)	550
AoxI	GGCC	4 cut(s)	843, 978, 1019, 1617
ApaI	GGGCCC	1 cut(s)	1023
ApaLI	GTGCAC	1 cut(s)	1598
ApeKI	GCWGC	5 cut(s)	65, 658, 674, 1168, 1363
ApoI	RAATTY	3 cut(s)	986, 1478, 1500
ArsI	GACNNNNNNTTYG	2 cut(s)	744, 776
AspLEI	GCGC	8 cut(s)	7, 9, 22, 413, 663, 784, 935, 1582
AspS9I	GGNCC	7 cut(s)	161, 281, 979, 1019, 1020, 1118, 1643
AsuHPI	GGTGA	7 cut(s)	197, 337, 649, 802, 1388, 1552, 1580
AsuNHI	GCTAGC	3 cut(s)	22, 860, 1009
AvaI	CYCGRG	1 cut(s)	427
AvaII	GGWCC	4 cut(s)	161, 281, 1118, 1643
BaeGI	GKGCMC	4 cut(s)	34, 305, 1023, 1602
BalI	TGGCCA	1 cut(s)	1619
BanI	GGYRCC	2 cut(s)	410, 1030
BanII	GRGCYC	1 cut(s)	1023
BarI	GAAGNNNNNNTAC	2 cut(s)	1322, 1354
Bbv12I	GWGCWC	3 cut(s)	550, 1059, 1602
BbvI	GCAGC	5 cut(s)	52, 645, 661, 1155, 1350
BccI	CCATC	4 cut(s)	272, 833, 1527, 1570
BceAI	ACGGC	4 cut(s)	931, 987, 993, 1389
BciT130I	CCWGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
BciVI	GTATCC	1 cut(s)	165
BclI	TGATCA	1 cut(s)	1542
BfaI	CTAG	5 cut(s)	23, 504, 861, 1010, 1292
BfmI	CTRYAG	3 cut(s)	331, 1350, 1364
BfoI	RGCGCY	2 cut(s)	414, 936
BfuAI	ACCTGC	1 cut(s)	292
BfuI	GTATCC	1 cut(s)	165
BglII	AGATCT	1 cut(s)	1294
BisI	GCNGC	7 cut(s)	66, 113, 659, 675, 846, 1169, 1364
BlsI	GCNGC	7 cut(s)	67, 114, 660, 676, 847, 1170, 1365
Bme1390I	CCNGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
Bme18I	GGWCC	4 cut(s)	161, 281, 1118, 1643
BmeT110I	CYCGRG	1 cut(s)	427
BmgBI	CACGTC	2 cut(s)	205, 1597
BmgT120I	GGNCC	7 cut(s)	161, 281, 979, 1019, 1020, 1118, 1643
BmiI	GGNNCC	7 cut(s)	392, 412, 919, 1021, 1022, 1032, 1038
BmrFI	CCNGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
BmrI	ACTGGG	3 cut(s)	292, 682, 1018
BmsI	GCATC	3 cut(s)	553, 1205, 1664
BmtI	GCTAGC	3 cut(s)	26, 864, 1013
BmuI	ACTGGG	3 cut(s)	292, 682, 1018
BplI	GAGNNNNNCTC	2 cut(s)	421, 453
BpuEI	CTTGAG	2 cut(s)	948, 1422
BsaAI	YACGTR	1 cut(s)	1429
BsaHI	GRCGYC	2 cut(s)	411, 738
BsaJI	CCNNGG	4 cut(s)	33, 1607, 1608, 1620
BsaWI	WCCGGW	4 cut(s)	347, 539, 550, 1249
BsaXI	ACNNNNNCTCC	6 cut(s)	891, 902, 921, 932, 1651, 1681
Bsc4I	CCNNNNNNNGG	1 cut(s)	1529
Bse118I	RCCGGY	2 cut(s)	1013, 1033
Bse1I	ACTGG	6 cut(s)	214, 298, 688, 820, 1024, 1523
BseAI	TCCGGA	1 cut(s)	550
BseBI	CCWGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
BseDI	CCNNGG	4 cut(s)	33, 1607, 1608, 1620
BseGI	GGATG	3 cut(s)	1196, 1538, 1581
BseLI	CCNNNNNNNGG	1 cut(s)	1529
BseMII	CTCAG	1 cut(s)	879
BseNI	ACTGG	6 cut(s)	214, 298, 688, 820, 1024, 1523
BsePI	GCGCGC	1 cut(s)	5
BseSI	GKGCMC	4 cut(s)	34, 305, 1023, 1602
BseXI	GCAGC	5 cut(s)	52, 645, 661, 1155, 1350
BsgI	GTGCAG	1 cut(s)	660
Bsh1236I	CGCG	5 cut(s)	7, 112, 782, 897, 1142
Bsh1285I	CGRYCG	3 cut(s)	735, 1254, 1389
BshFI	GGCC	4 cut(s)	845, 980, 1021, 1619
BshNI	GGYRCC	2 cut(s)	410, 1030
BsiEI	CGRYCG	3 cut(s)	735, 1254, 1389
BsiHKAI	GWGCWC	3 cut(s)	550, 1059, 1602
BsiHKCI	CYCGRG	1 cut(s)	427
BsiSI	CCGG	6 cut(s)	348, 540, 551, 1014, 1034, 1250
BslFI	GGGAC	1 cut(s)	202
BslI	CCNNNNNNNGG	1 cut(s)	1529
BsmFI	GGGAC	1 cut(s)	202
BsmI	GAATGC	2 cut(s)	79, 505
BsnI	GGCC	4 cut(s)	845, 980, 1021, 1619
BsoBI	CYCGRG	1 cut(s)	427
Bsp120I	GGGCCC	1 cut(s)	1019
Bsp1286I	GDGCHC	6 cut(s)	34, 305, 550, 1023, 1059, 1602
Bsp13I	TCCGGA	1 cut(s)	550
Bsp19I	CCATGG	1 cut(s)	1620
BspANI	GGCC	4 cut(s)	845, 980, 1021, 1619
BspCNI	CTCAG	1 cut(s)	878
BspEI	TCCGGA	1 cut(s)	550
BspFNI	CGCG	5 cut(s)	7, 112, 782, 897, 1142
BspLI	GGNNCC	7 cut(s)	392, 412, 919, 1021, 1022, 1032, 1038
BspMAI	CTGCAG	1 cut(s)	1368
BspMI	ACCTGC	1 cut(s)	292
BspOI	GCTAGC	3 cut(s)	26, 864, 1013
BspPI	GGATC	3 cut(s)	257, 426, 838
BspT107I	GGYRCC	2 cut(s)	410, 1030
BsrBI	CCGCTC	4 cut(s)	940, 1042, 1215, 1678
BsrFI	RCCGGY	2 cut(s)	1013, 1033
BsrI	ACTGG	6 cut(s)	214, 298, 688, 820, 1024, 1523
BssAI	RCCGGY	2 cut(s)	1013, 1033
BssECI	CCNNGG	4 cut(s)	33, 1607, 1608, 1620
BssHII	GCGCGC	1 cut(s)	5
BssNI	GRCGYC	2 cut(s)	411, 738
BssT1I	CCWWGG	1 cut(s)	1620
Bst2UI	CCWGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
Bst4CI	ACNGT	9 cut(s)	106, 403, 724, 876, 1048, 1072, 1182, 1351, 1651
BstACI	GRCGYC	2 cut(s)	411, 738
BstBAI	YACGTR	1 cut(s)	1429
BstC8I	GCNNGC	7 cut(s)	7, 24, 375, 862, 948, 1011, 1144
BstDEI	CTNAG	2 cut(s)	263, 865
BstDSI	CCRYGG	1 cut(s)	1620
BstF5I	GGATG	3 cut(s)	1196, 1538, 1581
BstFNI	CGCG	5 cut(s)	7, 112, 782, 897, 1142
BstH2I	RGCGCY	2 cut(s)	414, 936
BstHHI	GCGC	8 cut(s)	7, 9, 22, 413, 663, 784, 935, 1582
BstMCI	CGRYCG	3 cut(s)	735, 1254, 1389
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 44, 65, 737, 1039, 1382
BstNI	CCWGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
BstNSI	RCATGY	5 cut(s)	30, 377, 658, 1063, 1113
BstSCI	CCNGG	9 cut(s)	33, 157, 313, 465, 586, 784, 1564, 1590, 1607
BstSFI	CTRYAG	3 cut(s)	331, 1350, 1364
BstSLI	GKGCMC	4 cut(s)	34, 305, 1023, 1602
BstUI	CGCG	5 cut(s)	7, 112, 782, 897, 1142
BstV1I	GCAGC	5 cut(s)	52, 645, 661, 1155, 1350
BstX2I	RGATCY	4 cut(s)	249, 431, 830, 1294
BstXI	CCANNNNNNTGG	1 cut(s)	1572
BstYI	RGATCY	4 cut(s)	249, 431, 830, 1294
BsuI	GTATCC	1 cut(s)	165
BsuRI	GGCC	4 cut(s)	845, 980, 1021, 1619
BtgI	CCRYGG	1 cut(s)	1620
BtrI	CACGTC	2 cut(s)	205, 1597
BtsCI	GGATG	3 cut(s)	1196, 1538, 1581
BtsIMutI	CAGTG	3 cut(s)	305, 1031, 1178
BveI	ACCTGC	1 cut(s)	292
Cac8I	GCNNGC	7 cut(s)	7, 24, 375, 862, 948, 1011, 1144
CfoI	GCGC	8 cut(s)	7, 9, 22, 413, 663, 784, 935, 1582
Cfr10I	RCCGGY	2 cut(s)	1013, 1033
Cfr13I	GGNCC	7 cut(s)	161, 281, 979, 1019, 1020, 1118, 1643
CseI	GACGC	1 cut(s)	746
Csp6I	GTAC	3 cut(s)	360, 473, 1339
CviQI	GTAC	3 cut(s)	360, 473, 1339
DdeI	CTNAG	2 cut(s)	263, 865
DinI	GGCGCC	1 cut(s)	412
EaeI	YGGCCR	2 cut(s)	843, 1617
EciI	GGCGGA	1 cut(s)	1659
Eco130I	CCWWGG	1 cut(s)	1620
Eco24I	GRGCYC	1 cut(s)	1023
Eco47I	GGWCC	4 cut(s)	161, 281, 1118, 1643
Eco57I	CTGAAG	1 cut(s)	36
Eco88I	CYCGRG	1 cut(s)	427
EcoO109I	RGGNCCY	1 cut(s)	1020
EcoRII	CCWGG	9 cut(s)	33, 157, 313, 465, 586, 784, 1564, 1590, 1607
EcoT14I	CCWWGG	1 cut(s)	1620
EcoT22I	ATGCAT	1 cut(s)	568
EcoT38I	GRGCYC	1 cut(s)	1023
EgeI	GGCGCC	1 cut(s)	412
EheI	GGCGCC	1 cut(s)	412
ErhI	CCWWGG	1 cut(s)	1620
FalI	AAGNNNNNCTT	2 cut(s)	1107, 1139
FaqI	GGGAC	1 cut(s)	202
FauI	CCCGC	2 cut(s)	945, 1208
FauNDI	CATATG	2 cut(s)	289, 622
FbaI	TGATCA	1 cut(s)	1542
FblI	GTMKAC	2 cut(s)	735, 909
Fnu4HI	GCNGC	7 cut(s)	66, 113, 659, 675, 846, 1169, 1364
FokI	GGATG	3 cut(s)	1183, 1545, 1588
FriOI	GRGCYC	1 cut(s)	1023
Fsp4HI	GCNGC	7 cut(s)	66, 113, 659, 675, 846, 1169, 1364
FspBI	CTAG	5 cut(s)	23, 504, 861, 1010, 1292
FspI	TGCGCA	1 cut(s)	662
GlaI	GCGC	8 cut(s)	6, 8, 21, 412, 662, 783, 934, 1581
GluI	GCNGC	7 cut(s)	66, 113, 659, 675, 846, 1169, 1364
HaeII	RGCGCY	2 cut(s)	414, 936
HaeIII	GGCC	4 cut(s)	845, 980, 1021, 1619
HapII	CCGG	6 cut(s)	348, 540, 551, 1014, 1034, 1250
HgaI	GACGC	1 cut(s)	746
HhaI	GCGC	8 cut(s)	7, 9, 22, 413, 663, 784, 935, 1582
Hin1I	GRCGYC	2 cut(s)	411, 738
Hin6I	GCGC	8 cut(s)	5, 7, 20, 411, 661, 782, 933, 1580
HinP1I	GCGC	8 cut(s)	5, 7, 20, 411, 661, 782, 933, 1580
HincII	GTYRAC	3 cut(s)	514, 736, 1492
HindII	GTYRAC	3 cut(s)	514, 736, 1492
HinfI	GANTC	7 cut(s)	336, 523, 557, 900, 1081, 1157, 1393
HpaI	GTTAAC	1 cut(s)	1492
HpaII	CCGG	6 cut(s)	348, 540, 551, 1014, 1034, 1250
HphI	GGTGA	7 cut(s)	197, 337, 649, 802, 1388, 1552, 1580
Hpy166II	GTNNAC	8 cut(s)	202, 514, 736, 910, 1051, 1121, 1492, 1600
Hpy188I	TCNGA	8 cut(s)	562, 618, 792, 830, 1002, 1299, 1529, 1547
Hpy188III	TCNNGA	8 cut(s)	208, 551, 965, 1066, 1085, 1238, 1327, 1390
Hpy8I	GTNNAC	8 cut(s)	202, 514, 736, 910, 1051, 1121, 1492, 1600
Hpy99I	CGWCG	2 cut(s)	740, 776
HpyAV	CCTTC	3 cut(s)	350, 1094, 1171
HpyCH4III	ACNGT	9 cut(s)	106, 403, 724, 876, 1048, 1072, 1182, 1351, 1651
HpyCH4IV	ACGT	7 cut(s)	204, 471, 516, 759, 1209, 1428, 1596
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 44, 65, 737, 1039, 1382
HpyF3I	CTNAG	2 cut(s)	263, 865
HpySE526I	ACGT	7 cut(s)	204, 471, 516, 759, 1209, 1428, 1596
Hsp92I	GRCGYC	2 cut(s)	411, 738
HspAI	GCGC	8 cut(s)	5, 7, 20, 411, 661, 782, 933, 1580
KasI	GGCGCC	1 cut(s)	410
Kpn2I	TCCGGA	1 cut(s)	550
Ksp22I	TGATCA	1 cut(s)	1542
KspAI	GTTAAC	1 cut(s)	1492
LmnI	GCTCC	4 cut(s)	396, 553, 923, 1312
Lsp1109I	GCAGC	5 cut(s)	52, 645, 661, 1155, 1350
LweI	GCATC	3 cut(s)	553, 1205, 1664
MaeI	CTAG	5 cut(s)	23, 504, 861, 1010, 1292
MaeII	ACGT	7 cut(s)	204, 471, 516, 759, 1209, 1428, 1596
MaeIII	GTNAC	8 cut(s)	106, 185, 292, 760, 1066, 1105, 1505, 1586
MbiI	CCGCTC	4 cut(s)	940, 1042, 1215, 1678
MboII	GAAGA	4 cut(s)	42, 685, 688, 1294
MfeI	CAATTG	1 cut(s)	1512
MflI	RGATCY	4 cut(s)	249, 431, 830, 1294
MhlI	GDGCHC	6 cut(s)	34, 305, 550, 1023, 1059, 1602
MlsI	TGGCCA	1 cut(s)	1619
MluCI	AATT	7 cut(s)	601, 986, 1185, 1450, 1478, 1500, 1512
MluNI	TGGCCA	1 cut(s)	1619
Mly113I	GGCGCC	1 cut(s)	411
MlyI	GAGTC	2 cut(s)	909, 1166
MmeI	TCCRAC	2 cut(s)	188, 1507
Mox20I	TGGCCA	1 cut(s)	1619
Mph1103I	ATGCAT	1 cut(s)	568
MroI	TCCGGA	1 cut(s)	550
MscI	TGGCCA	1 cut(s)	1619
MseI	TTAA	5 cut(s)	144, 1125, 1464, 1491, 1696
MslI	CAYNNNNRTG	3 cut(s)	243, 1064, 1410
Msp20I	TGGCCA	1 cut(s)	1619
MspA1I	CMGCKG	1 cut(s)	1168
MspI	CCGG	6 cut(s)	348, 540, 551, 1014, 1034, 1250
MspR9I	CCNGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
MunI	CAATTG	1 cut(s)	1512
Mva1269I	GAATGC	2 cut(s)	79, 505
MvaI	CCWGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
MvnI	CGCG	5 cut(s)	7, 112, 782, 897, 1142
MwoI	GCNNNNNNNGC	6 cut(s)	11, 44, 65, 737, 1039, 1382
NarI	GGCGCC	1 cut(s)	411
NcoI	CCATGG	1 cut(s)	1620
NdeI	CATATG	2 cut(s)	289, 622
NheI	GCTAGC	3 cut(s)	22, 860, 1009
NlaIV	GGNNCC	7 cut(s)	392, 412, 919, 1021, 1022, 1032, 1038
NmuCI	GTSAC	5 cut(s)	185, 760, 1066, 1105, 1586
NsbI	TGCGCA	1 cut(s)	662
NsiI	ATGCAT	1 cut(s)	568
NspI	RCATGY	5 cut(s)	30, 377, 658, 1063, 1113
PaeI	GCATGC	1 cut(s)	377
PasI	CCCWGGG	1 cut(s)	1608
PauI	GCGCGC	1 cut(s)	5
PciI	ACATGT	2 cut(s)	1059, 1109
PctI	GAATGC	2 cut(s)	79, 505
PfeI	GAWTC	5 cut(s)	336, 523, 557, 1081, 1393
PfoI	TCCNGGA	1 cut(s)	313
PkrI	GCNGC	7 cut(s)	67, 114, 660, 676, 847, 1170, 1365
Ple19I	CGATCG	1 cut(s)	1389
PleI	GAGTC	2 cut(s)	908, 1165
PluTI	GGCGCC	1 cut(s)	414
PpsI	GAGTC	2 cut(s)	908, 1165
Ppu21I	YACGTR	1 cut(s)	1429
PscI	ACATGT	2 cut(s)	1059, 1109
PsiI	TTATAA	1 cut(s)	600
Psp6I	CCWGG	9 cut(s)	33, 157, 313, 465, 586, 784, 1564, 1590, 1607
PspGI	CCWGG	9 cut(s)	33, 157, 313, 465, 586, 784, 1564, 1590, 1607
PspN4I	GGNNCC	7 cut(s)	392, 412, 919, 1021, 1022, 1032, 1038
PspOMI	GGGCCC	1 cut(s)	1019
PspPI	GGNCC	7 cut(s)	161, 281, 979, 1019, 1020, 1118, 1643
PstI	CTGCAG	1 cut(s)	1368
PsuI	RGATCY	4 cut(s)	249, 431, 830, 1294
PteI	GCGCGC	1 cut(s)	5
PvuI	CGATCG	1 cut(s)	1389
PvuII	CAGCTG	1 cut(s)	1168
RsaI	GTAC	3 cut(s)	361, 474, 1340
RsaNI	GTAC	3 cut(s)	360, 473, 1339
RseI	CAYNNNNRTG	3 cut(s)	243, 1064, 1410
SalI	GTCGAC	1 cut(s)	734
SaqAI	TTAA	5 cut(s)	144, 1125, 1464, 1491, 1696
SatI	GCNGC	7 cut(s)	66, 113, 659, 675, 846, 1169, 1364
Sau96I	GGNCC	7 cut(s)	161, 281, 979, 1019, 1020, 1118, 1643
SchI	GAGTC	2 cut(s)	909, 1166
ScrFI	CCNGG	9 cut(s)	35, 159, 315, 467, 588, 786, 1566, 1592, 1609
SduI	GDGCHC	6 cut(s)	34, 305, 550, 1023, 1059, 1602
SfaNI	GCATC	3 cut(s)	553, 1205, 1664
SfcI	CTRYAG	3 cut(s)	331, 1350, 1364
SfoI	GGCGCC	1 cut(s)	412
SinI	GGWCC	4 cut(s)	161, 281, 1118, 1643
SmiMI	CAYNNNNRTG	3 cut(s)	243, 1064, 1410
SmlI	CTYRAG	2 cut(s)	963, 1437
SmoI	CTYRAG	2 cut(s)	963, 1437
SphI	GCATGC	1 cut(s)	377
Sse9I	AATT	7 cut(s)	601, 986, 1185, 1450, 1478, 1500, 1512
SspDI	GGCGCC	1 cut(s)	410
SspMI	CTAG	5 cut(s)	23, 504, 861, 1010, 1292
StyD4I	CCNGG	9 cut(s)	33, 157, 313, 465, 586, 784, 1564, 1590, 1607
StyI	CCWWGG	1 cut(s)	1620
TaaI	ACNGT	9 cut(s)	106, 403, 724, 876, 1048, 1072, 1182, 1351, 1651
TaiI	ACGT	7 cut(s)	207, 474, 519, 762, 1212, 1431, 1599
TaqI	TCGA	6 cut(s)	75, 735, 929, 1254, 1389, 1680
TasI	AATT	7 cut(s)	601, 986, 1185, 1450, 1478, 1500, 1512
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	2 cut(s)	115, 848
TfiI	GAWTC	5 cut(s)	336, 523, 557, 1081, 1393
Tru1I	TTAA	5 cut(s)	144, 1125, 1464, 1491, 1696
Tru9I	TTAA	5 cut(s)	144, 1125, 1464, 1491, 1696
TscAI	CASTG	3 cut(s)	305, 1031, 1185
TseFI	GTSAC	5 cut(s)	185, 760, 1066, 1105, 1586
TseI	GCWGC	5 cut(s)	65, 658, 674, 1168, 1363
Tsp45I	GTSAC	5 cut(s)	185, 760, 1066, 1105, 1586
TspDTI	ATGAA	6 cut(s)	77, 227, 375, 1163, 1394, 1400
TspGWI	ACGGA	1 cut(s)	383
TspRI	CASTG	3 cut(s)	305, 1031, 1185
VneI	GTGCAC	1 cut(s)	1598
VpaK11BI	GGWCC	4 cut(s)	161, 281, 1118, 1643
XapI	RAATTY	3 cut(s)	986, 1478, 1500
XceI	RCATGY	5 cut(s)	30, 377, 658, 1063, 1113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1530
XmiI	GTMKAC	2 cut(s)	735, 909
XspI	CTAG	5 cut(s)	23, 504, 861, 1010, 1292
Zsp2I	ATGCAT	1 cut(s)	568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.