Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Forward (+)

23787046 .. 23789552

Gene Structure 2507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1157100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCACGCTTAGCATTTGTGCTAGTATGTGCTGTAGCTCTATTGGCTTCTTCAGTAGCCTCTGGTGCAATTGTTGAGCATTCTTTTAATGTAAACAACATGACAGTTAGCCGACTGTGCCGAAATCAATCGATTACTGTAGTAAATGGGAGCTATCCAGGACCGACAATATATGCACGAGATGGAGACACACTTATTGTCCACGTTTTAAACCAATCACCCTACAACATTACTATTCACTGGCATGGAATCTTTCAGCTTCTGAGTGCATGGGCGGATGGACCTGCATATGTAACTCAATGTCCTATACGCCCTGGACAAAGCTTTACATACAAATTTAATATCACCGGACAAGAAGGCACCCTTTGGTGGCATGCCCACGTTTCGTGGCTCCGCGCAACCGTCCACGGAGCACTCATAATCCACCCGAAAGTCGGTCGATCCTTCCCCTTCCTCAAGCCCGCCAAAGAAGTTCCCATCTTATTAGGAGAGTGGTACAATGGTAATGTTGTTGACATTGAGGAAGAAGGCCTAGCTACCGGAATTGCTCCTAACGGTTCAAATGCTTACACCATAAATGGACTTCCCGGCGATCTATACGACTGCTCTCAAAATCAGACATATCAACTCAATGTGGTGAGAGGAAAGACCTACCTCCTACGCCTAATCAATGTTGCACTCAATAACCAACTCTTCTTCAAGATAGCCAATCACAACATGACAGTTGTCGCTATCGACGCCACCTATACCACTCCTTATGTCACCGACGTGGTGGTTACTGGACCCGGCCAGACCACTGACGTTCTCGTCAAATTCAATCAACCTATTGGATCCTATTTCATGGCCGCCACTCCTTATGCTAGCGCAAACATTAACTTTGATAACACAACCACCAGAGGCATCATCGTCTACAAGGGCTCTAGATCATCAACCCCCATTATGCCCTCAATGCCCAACCCTCGCAACACACCATTGGCCCACAAGTTCTTAACCAATCTCACCGGCCTTGCCGGCGGGCCCCAGTGGGTCCCGGTCCCACTCAAGGTGGACGAGCGCATGTTTGTGACAATTAGCGTCAACTTGGAGCTGTGTCCGGAAAATGCCACATGTCAGGGCCCGCTCTTTAATCGATTGTCCGCTAGCATGAACAACGAGTCATTCGTGCTTCCGAGCAATACATCCATGATGGAAGCACAGTTTAACAACATGAGTGGGGTTTACACCAGAGATTTTCCTGACGAGCCTCCGATCAAGTTTGACTACACGGACACGAACGTTAGCTTTGACCTGTCGTTGATATATGCCCCAAAATCAACCAAGGTCAAGACGTTGAAATTCAATTCGACGGTGGAGGTCGTGCTTCAAAACACAGCGTTCTTGGCGATTGAGAATCATCCGATGCATCTCCATGGCTTCAATTTCCACGTGCTGGCACAAGGGTTTGGTAATTACGACCCAATTAATGACCCCAAAAAATTTAACTTCATTAATCCACAAATACGTAACACAATTGGTGTGCCGGTCGGAGGATGGGCTGTGATCAGGTTTCAAGCAAATAATCCAGGTATTTGGTACATGCACTGTCATTTGGACGTTCATGTGCCCTGGGGGCTAGGCATGGCTTTTGAGGTTGAAAATGGACCGACGCCAGAATCTACTTTGCCTCCGCCACCACTTGATCTTCCCAAATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

565

Amino Acids

62.24

Weight (kDa)

6.62

Isoelectric Point (pI)

33.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	31 - 144	9.3e-42	Multicopper oxidase
Cu-oxidase	PF00394	157 - 307	2.2e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	410 - 546	5.6e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	806
Acc36I	ACCTGC	1 cut(s)	292
AccB1I	GGYRCC	1 cut(s)	359
AccB7I	CCANNNNNTGG	1 cut(s)	1429
AccBSI	CCGCTC	1 cut(s)	1120
AccI	GTMKAC	1 cut(s)	909
AccII	CGCG	1 cut(s)	396
AccIII	TCCGGA	1 cut(s)	1093
AciI	CCGC	8 cut(s)	275, 394, 462, 846, 1014, 1118, 1137, 1667
AclI	AACGTT	1 cut(s)	1275
AclWI	GGATC	3 cut(s)	435, 825, 838
AcoI	YGGCCR	2 cut(s)	787, 843
AcsI	RAATTY	4 cut(s)	335, 812, 1334, 1475
AcuI	CTGAAG	1 cut(s)	36
AcvI	CACGTG	1 cut(s)	1426
AcyI	GRCGYC	2 cut(s)	738, 1646
AfaI	GTAC	2 cut(s)	497, 1574
AfiI	CCNNNNNNNGG	5 cut(s)	369, 434, 1042, 1429, 1526
AflIII	ACRYGT	1 cut(s)	1106
AgsI	TTSAA	9 cut(s)	561, 700, 817, 1333, 1339, 1364, 1417, 1550, 1634
AjiI	CACGTC	1 cut(s)	769
AjnI	CCWGG	4 cut(s)	157, 313, 1561, 1604
AleI	CACNNNNGTG	1 cut(s)	767
AluBI	AGCT	7 cut(s)	38, 153, 259, 324, 536, 1087, 1281
AluI	AGCT	7 cut(s)	38, 153, 259, 324, 536, 1087, 1281
Alw21I	GWGCWC	1 cut(s)	415
Alw26I	GTCTC	1 cut(s)	180
AlwI	GGATC	3 cut(s)	435, 825, 838
AlwNI	CAGNNNCTG	1 cut(s)	262
Aor13HI	TCCGGA	1 cut(s)	1093
AoxI	GGCC	7 cut(s)	529, 787, 843, 975, 1003, 1016, 1114
ApaI	GGGCCC	2 cut(s)	1020, 1118
ApoI	RAATTY	4 cut(s)	335, 812, 1334, 1475
AseI	ATTAAT	2 cut(s)	1461, 1488
AspLEI	GCGC	3 cut(s)	398, 866, 1056
AsuC2I	CCSGG	3 cut(s)	588, 786, 1031
AsuHPI	GGTGA	5 cut(s)	210, 337, 649, 754, 991
AsuNHI	GCTAGC	2 cut(s)	860, 1139
AvaII	GGWCC	6 cut(s)	161, 281, 782, 1027, 1033, 1640
BaeGI	GKGCMC	3 cut(s)	1020, 1118, 1605
BaeI	ACNNNNGTAYC	2 cut(s)	487, 520
BamHI	GGATCC	1 cut(s)	830
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	3 cut(s)	920, 1020, 1118
BauI	CACGAG	1 cut(s)	177
BbrPI	CACGTG	1 cut(s)	1426
Bbv12I	GWGCWC	1 cut(s)	415
BccI	CCATC	5 cut(s)	176, 272, 485, 1180, 1524
BciT130I	CCWGG	4 cut(s)	159, 315, 1563, 1606
BclI	TGATCA	1 cut(s)	1539
BcnI	CCSGG	3 cut(s)	588, 786, 1031
BcoDI	GTCTC	1 cut(s)	180
BfaI	CTAG	6 cut(s)	23, 533, 861, 921, 1140, 1613
BfmI	CTRYAG	2 cut(s)	33, 138
BfuAI	ACCTGC	1 cut(s)	292
BglI	GCCNNNNNGGC	2 cut(s)	1011, 1609
BisI	GCNGC	1 cut(s)	846
BlpI	GCTNAGC	1 cut(s)	10
BlsI	GCNGC	1 cut(s)	847
Bme1390I	CCNGG	7 cut(s)	159, 315, 588, 786, 1031, 1563, 1606
Bme18I	GGWCC	6 cut(s)	161, 281, 782, 1027, 1033, 1640
BmgBI	CACGTC	1 cut(s)	769
BmrFI	CCNGG	7 cut(s)	159, 315, 588, 786, 1031, 1563, 1606
BmrI	ACTGGG	1 cut(s)	1015
BmsI	GCATC	3 cut(s)	909, 1389, 1411
BmtI	GCTAGC	2 cut(s)	864, 1143
BmuI	ACTGGG	1 cut(s)	1015
BoxI	GACNNNNGTC	1 cut(s)	725
Bpu1102I	GCTNAGC	1 cut(s)	10
BpuEI	CTTGAG	2 cut(s)	440, 1025
BpuMI	CCSGG	3 cut(s)	588, 786, 1031
Bsa29I	ATCGAT	2 cut(s)	131, 1129
BsaAI	YACGTR	2 cut(s)	1426, 1502
BsaHI	GRCGYC	2 cut(s)	738, 1646
BsaJI	CCNNGG	6 cut(s)	313, 406, 1317, 1408, 1604, 1605
BsaWI	WCCGGW	3 cut(s)	347, 539, 1093
BsaXI	ACNNNNNCTCC	2 cut(s)	1648, 1678
Bsc4I	CCNNNNNNNGG	5 cut(s)	369, 434, 1042, 1429, 1526
Bse118I	RCCGGY	3 cut(s)	1001, 1010, 1519
Bse1I	ACTGG	3 cut(s)	245, 784, 1021
BseAI	TCCGGA	1 cut(s)	1093
BseBI	CCWGG	4 cut(s)	159, 315, 1563, 1606
BseCI	ATCGAT	2 cut(s)	131, 1129
BseDI	CCNNGG	6 cut(s)	313, 406, 1317, 1408, 1604, 1605
BseGI	GGATG	4 cut(s)	283, 1178, 1393, 1535
BseLI	CCNNNNNNNGG	5 cut(s)	369, 434, 1042, 1429, 1526
BseMII	CTCAG	1 cut(s)	254
BseNI	ACTGG	3 cut(s)	245, 784, 1021
BseSI	GKGCMC	3 cut(s)	1020, 1118, 1605
Bsh1236I	CGCG	1 cut(s)	396
Bsh1285I	CGRYCG	2 cut(s)	439, 1524
BshFI	GGCC	7 cut(s)	531, 789, 845, 977, 1005, 1018, 1116
BshNI	GGYRCC	1 cut(s)	359
BshVI	ATCGAT	2 cut(s)	131, 1129
BsiEI	CGRYCG	2 cut(s)	439, 1524
BsiHKAI	GWGCWC	1 cut(s)	415
BsiSI	CCGG	9 cut(s)	348, 540, 588, 786, 1002, 1011, 1031, 1094, 1520
BslFI	GGGAC	2 cut(s)	1013, 1019
BslI	CCNNNNNNNGG	5 cut(s)	369, 434, 1042, 1429, 1526
BsmAI	GTCTC	1 cut(s)	180
BsmFI	GGGAC	2 cut(s)	1013, 1019
BsmI	GAATGC	1 cut(s)	79
BsnI	GGCC	7 cut(s)	531, 789, 845, 977, 1005, 1018, 1116
Bsp120I	GGGCCC	2 cut(s)	1016, 1114
Bsp1286I	GDGCHC	5 cut(s)	415, 920, 1020, 1118, 1605
Bsp13I	TCCGGA	1 cut(s)	1093
Bsp143I	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
Bsp1720I	GCTNAGC	1 cut(s)	10
Bsp19I	CCATGG	1 cut(s)	1408
BspACI	CCGC	8 cut(s)	275, 394, 462, 846, 1014, 1118, 1137, 1667
BspANI	GGCC	7 cut(s)	531, 789, 845, 977, 1005, 1018, 1116
BspCNI	CTCAG	1 cut(s)	255
BspDI	ATCGAT	2 cut(s)	131, 1129
BspEI	TCCGGA	1 cut(s)	1093
BspFNI	CGCG	1 cut(s)	396
BspMI	ACCTGC	1 cut(s)	292
BspOI	GCTAGC	2 cut(s)	864, 1143
BspPI	GGATC	3 cut(s)	435, 825, 838
BspT107I	GGYRCC	1 cut(s)	359
BsrBI	CCGCTC	1 cut(s)	1120
BsrFI	RCCGGY	3 cut(s)	1001, 1010, 1519
BsrI	ACTGG	3 cut(s)	245, 784, 1021
BssAI	RCCGGY	3 cut(s)	1001, 1010, 1519
BssECI	CCNNGG	6 cut(s)	313, 406, 1317, 1408, 1604, 1605
BssMI	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
BssNI	GRCGYC	2 cut(s)	738, 1646
BssSI	CACGAG	1 cut(s)	177
BssT1I	CCWWGG	2 cut(s)	1317, 1408
Bst2BI	CACGAG	1 cut(s)	177
Bst2UI	CCWGG	4 cut(s)	159, 315, 1563, 1606
Bst4CI	ACNGT	9 cut(s)	106, 117, 139, 403, 557, 724, 1197, 1348, 1583
Bst6I	CTCTTC	1 cut(s)	698
BstACI	GRCGYC	2 cut(s)	738, 1646
BstBAI	YACGTR	2 cut(s)	1426, 1502
BstC8I	GCNNGC	9 cut(s)	7, 375, 462, 862, 1012, 1016, 1118, 1141, 1431
BstDEI	CTNAG	2 cut(s)	10, 263
BstDSI	CCRYGG	2 cut(s)	406, 1408
BstF5I	GGATG	4 cut(s)	283, 1178, 1393, 1535
BstFNI	CGCG	1 cut(s)	396
BstHHI	GCGC	3 cut(s)	398, 866, 1056
BstKTI	GATC	7 cut(s)	443, 595, 833, 926, 1251, 1542, 1681
BstMAI	GTCTC	1 cut(s)	180
BstMBI	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
BstMCI	CGRYCG	2 cut(s)	439, 1524
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 44, 65, 117, 737, 949, 1011, 1379, 1609
BstNI	CCWGG	4 cut(s)	159, 315, 1563, 1606
BstNSI	RCATGY	4 cut(s)	377, 1060, 1110, 1579
BstPAI	GACNNNNGTC	1 cut(s)	725
BstSCI	CCNGG	7 cut(s)	157, 313, 586, 784, 1029, 1561, 1604
BstSFI	CTRYAG	2 cut(s)	33, 138
BstSLI	GKGCMC	3 cut(s)	1020, 1118, 1605
BstSNI	TACGTA	1 cut(s)	1502
BstUI	CGCG	1 cut(s)	396
BstX2I	RGATCY	1 cut(s)	830
BstXI	CCANNNNNNTGG	1 cut(s)	1569
BstYI	RGATCY	1 cut(s)	830
Bsu15I	ATCGAT	2 cut(s)	131, 1129
BsuRI	GGCC	7 cut(s)	531, 789, 845, 977, 1005, 1018, 1116
BsuTUI	ATCGAT	2 cut(s)	131, 1129
BtgI	CCRYGG	2 cut(s)	406, 1408
BtrI	CACGTC	1 cut(s)	769
BtsCI	GGATG	4 cut(s)	283, 1178, 1393, 1535
BtsIMutI	CAGTG	4 cut(s)	238, 795, 1028, 1579
BveI	ACCTGC	1 cut(s)	292
Cac8I	GCNNGC	9 cut(s)	7, 375, 462, 862, 1012, 1016, 1118, 1141, 1431
CaiI	CAGNNNCTG	1 cut(s)	262
CfoI	GCGC	3 cut(s)	398, 866, 1056
Cfr10I	RCCGGY	3 cut(s)	1001, 1010, 1519
ClaI	ATCGAT	2 cut(s)	131, 1129
CseI	GACGC	3 cut(s)	746, 1063, 1654
Csp6I	GTAC	2 cut(s)	496, 1573
CspCI	CAANNNNNGTGG	2 cut(s)	1192, 1227
CviQI	GTAC	2 cut(s)	496, 1573
DdeI	CTNAG	2 cut(s)	10, 263
DpnI	GATC	7 cut(s)	442, 594, 832, 925, 1250, 1541, 1680
DpnII	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
DraI	TTTAAA	1 cut(s)	210
DrdI	GACNNNNNNGTC	1 cut(s)	806
DseDI	GACNNNNNNGTC	1 cut(s)	806
EaeI	YGGCCR	2 cut(s)	787, 843
Eam1104I	CTCTTC	1 cut(s)	698
EarI	CTCTTC	1 cut(s)	698
EciI	GGCGGA	2 cut(s)	290, 1656
Eco105I	TACGTA	1 cut(s)	1502
Eco130I	CCWWGG	2 cut(s)	1317, 1408
Eco147I	AGGCCT	1 cut(s)	531
Eco24I	GRGCYC	3 cut(s)	920, 1020, 1118
Eco47I	GGWCC	6 cut(s)	161, 281, 782, 1027, 1033, 1640
Eco57I	CTGAAG	1 cut(s)	36
Eco72I	CACGTG	1 cut(s)	1426
EcoO109I	RGGNCCY	3 cut(s)	1017, 1027, 1114
EcoRII	CCWGG	4 cut(s)	157, 313, 1561, 1604
EcoT14I	CCWWGG	2 cut(s)	1317, 1408
EcoT22I	ATGCAT	1 cut(s)	1404
EcoT38I	GRGCYC	3 cut(s)	920, 1020, 1118
ErhI	CCWWGG	2 cut(s)	1317, 1408
FalI	AAGNNNNNCTT	2 cut(s)	348, 380
FaqI	GGGAC	2 cut(s)	1013, 1019
FauI	CCCGC	3 cut(s)	469, 1007, 1125
FauNDI	CATATG	1 cut(s)	289
FbaI	TGATCA	1 cut(s)	1539
FblI	GTMKAC	1 cut(s)	909
Fnu4HI	GCNGC	1 cut(s)	846
FokI	GGATG	4 cut(s)	290, 1165, 1380, 1542
FriOI	GRGCYC	3 cut(s)	920, 1020, 1118
Fsp4HI	GCNGC	1 cut(s)	846
FspBI	CTAG	6 cut(s)	23, 533, 861, 921, 1140, 1613
GlaI	GCGC	3 cut(s)	397, 865, 1055
GluI	GCNGC	1 cut(s)	846
HaeIII	GGCC	7 cut(s)	531, 789, 845, 977, 1005, 1018, 1116
HapII	CCGG	9 cut(s)	348, 540, 588, 786, 1002, 1011, 1031, 1094, 1520
HgaI	GACGC	3 cut(s)	746, 1063, 1654
HhaI	GCGC	3 cut(s)	398, 866, 1056
Hin1I	GRCGYC	2 cut(s)	738, 1646
Hin6I	GCGC	3 cut(s)	396, 864, 1054
HinP1I	GCGC	3 cut(s)	396, 864, 1054
HincII	GTYRAC	2 cut(s)	514, 1078
HindII	GTYRAC	2 cut(s)	514, 1078
HindIII	AAGCTT	1 cut(s)	322
HinfI	GANTC	4 cut(s)	249, 1154, 1390, 1652
HpaII	CCGG	9 cut(s)	348, 540, 588, 786, 1002, 1011, 1031, 1094, 1520
HphI	GGTGA	5 cut(s)	210, 337, 649, 754, 991
Hpy166II	GTNNAC	8 cut(s)	94, 202, 406, 514, 910, 1048, 1078, 1219
Hpy188I	TCNGA	6 cut(s)	264, 618, 1170, 1248, 1398, 1526
Hpy188III	TCNNGA	5 cut(s)	700, 921, 1094, 1235, 1324
Hpy8I	GTNNAC	8 cut(s)	94, 202, 406, 514, 910, 1048, 1078, 1219
Hpy99I	CGWCG	4 cut(s)	740, 770, 1348, 1648
HpyAV	CCTTC	4 cut(s)	350, 454, 460, 521
HpyCH4III	ACNGT	9 cut(s)	106, 117, 139, 403, 557, 724, 1197, 1348, 1583
HpyCH4IV	ACGT	9 cut(s)	204, 381, 768, 801, 1275, 1328, 1425, 1501, 1593
HpyCH4V	TGCA	7 cut(s)	68, 176, 269, 287, 677, 1402, 1579
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 44, 65, 117, 737, 949, 1011, 1379, 1609
HpyF3I	CTNAG	2 cut(s)	10, 263
HpySE526I	ACGT	9 cut(s)	204, 381, 768, 801, 1275, 1328, 1425, 1501, 1593
Hsp92I	GRCGYC	2 cut(s)	738, 1646
HspAI	GCGC	3 cut(s)	396, 864, 1054
KflI	GGGWCCC	1 cut(s)	1027
Kpn2I	TCCGGA	1 cut(s)	1093
KroI	GCCGGC	1 cut(s)	1010
KroNI	GCCGGC	1 cut(s)	1012
Ksp22I	TGATCA	1 cut(s)	1539
Kzo9I	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
LmnI	GCTCC	5 cut(s)	150, 396, 410, 553, 1084
LweI	GCATC	3 cut(s)	909, 1389, 1411
MaeI	CTAG	6 cut(s)	23, 533, 861, 921, 1140, 1613
MaeII	ACGT	9 cut(s)	204, 381, 768, 801, 1275, 1328, 1425, 1501, 1593
MaeIII	GTNAC	5 cut(s)	292, 760, 775, 1063, 1502
MalI	GATC	7 cut(s)	442, 594, 832, 925, 1250, 1541, 1680
MbiI	CCGCTC	1 cut(s)	1120
MboI	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
MboII	GAAGA	5 cut(s)	42, 536, 685, 688, 1673
MfeI	CAATTG	2 cut(s)	69, 1509
MflI	RGATCY	1 cut(s)	830
MhlI	GDGCHC	5 cut(s)	415, 920, 1020, 1118, 1605
MlyI	GAGTC	1 cut(s)	1163
MmeI	TCCRAC	1 cut(s)	1504
Mph1103I	ATGCAT	1 cut(s)	1404
MroI	TCCGGA	1 cut(s)	1093
MroNI	GCCGGC	1 cut(s)	1010
MslI	CAYNNNNRTG	4 cut(s)	243, 767, 1061, 1407
MspI	CCGG	9 cut(s)	348, 540, 588, 786, 1002, 1011, 1031, 1094, 1520
MspR9I	CCNGG	7 cut(s)	159, 315, 588, 786, 1031, 1563, 1606
MunI	CAATTG	2 cut(s)	69, 1509
Mva1269I	GAATGC	1 cut(s)	79
MvaI	CCWGG	4 cut(s)	159, 315, 1563, 1606
MvnI	CGCG	1 cut(s)	396
MwoI	GCNNNNNNNGC	9 cut(s)	11, 44, 65, 117, 737, 949, 1011, 1379, 1609
NaeI	GCCGGC	1 cut(s)	1012
NciI	CCSGG	3 cut(s)	588, 786, 1031
NcoI	CCATGG	1 cut(s)	1408
NdeI	CATATG	1 cut(s)	289
NdeII	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
NgoMIV	GCCGGC	1 cut(s)	1010
NheI	GCTAGC	2 cut(s)	860, 1139
NmuCI	GTSAC	2 cut(s)	760, 1063
NsiI	ATGCAT	1 cut(s)	1404
NspI	RCATGY	4 cut(s)	377, 1060, 1110, 1579
OliI	CACNNNNGTG	1 cut(s)	767
PaeI	GCATGC	1 cut(s)	377
PasI	CCCWGGG	1 cut(s)	1605
PceI	AGGCCT	1 cut(s)	531
PciI	ACATGT	1 cut(s)	1106
PcsI	WCGNNNNNNNCGW	1 cut(s)	1158
PctI	GAATGC	1 cut(s)	79
PdiI	GCCGGC	1 cut(s)	1012
PfeI	GAWTC	3 cut(s)	249, 1390, 1652
PflMI	CCANNNNNTGG	1 cut(s)	1429
PfoI	TCCNGGA	1 cut(s)	157
PkrI	GCNGC	1 cut(s)	847
PleI	GAGTC	1 cut(s)	1162
PmaCI	CACGTG	1 cut(s)	1426
PmlI	CACGTG	1 cut(s)	1426
PpsI	GAGTC	1 cut(s)	1162
Ppu21I	YACGTR	2 cut(s)	1426, 1502
PpuMI	RGGWCCY	1 cut(s)	1027
PscI	ACATGT	1 cut(s)	1106
PshAI	GACNNNNGTC	1 cut(s)	725
PshBI	ATTAAT	2 cut(s)	1461, 1488
Psp1406I	AACGTT	1 cut(s)	1275
Psp5II	RGGWCCY	1 cut(s)	1027
Psp6I	CCWGG	4 cut(s)	157, 313, 1561, 1604
PspCI	CACGTG	1 cut(s)	1426
PspGI	CCWGG	4 cut(s)	157, 313, 1561, 1604
PspOMI	GGGCCC	2 cut(s)	1016, 1114
PspPPI	RGGWCCY	1 cut(s)	1027
PstNI	CAGNNNCTG	1 cut(s)	262
PsuI	RGATCY	1 cut(s)	830
RsaI	GTAC	2 cut(s)	497, 1574
RsaNI	GTAC	2 cut(s)	496, 1573
RseI	CAYNNNNRTG	4 cut(s)	243, 767, 1061, 1407
SatI	GCNGC	1 cut(s)	846
Sau3AI	GATC	7 cut(s)	440, 592, 830, 923, 1248, 1539, 1678
SchI	GAGTC	1 cut(s)	1163
ScrFI	CCNGG	7 cut(s)	159, 315, 588, 786, 1031, 1563, 1606
SduI	GDGCHC	5 cut(s)	415, 920, 1020, 1118, 1605
SfaNI	GCATC	3 cut(s)	909, 1389, 1411
SfcI	CTRYAG	2 cut(s)	33, 138
SinI	GGWCC	6 cut(s)	161, 281, 782, 1027, 1033, 1640
SmiMI	CAYNNNNRTG	4 cut(s)	243, 767, 1061, 1407
SmlI	CTYRAG	2 cut(s)	455, 1040
SmoI	CTYRAG	2 cut(s)	455, 1040
SnaBI	TACGTA	1 cut(s)	1502
SphI	GCATGC	1 cut(s)	377
SseBI	AGGCCT	1 cut(s)	531
SsiI	CCGC	8 cut(s)	275, 394, 462, 846, 1014, 1118, 1137, 1667
SspMI	CTAG	6 cut(s)	23, 533, 861, 921, 1140, 1613
StuI	AGGCCT	1 cut(s)	531
StyD4I	CCNGG	7 cut(s)	157, 313, 586, 784, 1029, 1561, 1604
StyI	CCWWGG	2 cut(s)	1317, 1408
TaaI	ACNGT	9 cut(s)	106, 117, 139, 403, 557, 724, 1197, 1348, 1583
TaiI	ACGT	9 cut(s)	207, 384, 771, 804, 1278, 1331, 1428, 1504, 1596
TaqI	TCGA	5 cut(s)	131, 439, 735, 1129, 1343
TaqII	GACCGA	3 cut(s)	178, 425, 1657
TauI	GCSGC	1 cut(s)	848
TfiI	GAWTC	3 cut(s)	249, 1390, 1652
TscAI	CASTG	4 cut(s)	245, 802, 1028, 1586
TseFI	GTSAC	2 cut(s)	760, 1063
Tsp45I	GTSAC	2 cut(s)	760, 1063
TspDTI	ATGAA	4 cut(s)	829, 1160, 1474, 1586
TspGWI	ACGGA	2 cut(s)	423, 1280
TspRI	CASTG	4 cut(s)	245, 802, 1028, 1586
Van91I	CCANNNNNTGG	1 cut(s)	1429
VpaK11BI	GGWCC	6 cut(s)	161, 281, 782, 1027, 1033, 1640
VspI	ATTAAT	2 cut(s)	1461, 1488
XapI	RAATTY	4 cut(s)	335, 812, 1334, 1475
XbaI	TCTAGA	1 cut(s)	920
XceI	RCATGY	4 cut(s)	377, 1060, 1110, 1579
XmiI	GTMKAC	1 cut(s)	909
XspI	CTAG	6 cut(s)	23, 533, 861, 921, 1140, 1613
Zsp2I	ATGCAT	1 cut(s)	1404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.