Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003803

Physical Location & Seq

Genomic Coordinates Reverse (-)

5654880 .. 5658545

Gene Structure 3666 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0071000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGACGGAGAAGAGAAACCCAGCAGCAGAAAATGCTATGATGGAGATAGAGAGCAGCAAGGCCTCTGGAAATGGGATTGTGGCTGGTGGACTTAGTCCTCTGAGTGAGACTCTATGGAGGGAGAAGGCCAGTGTGGAAATAGTAGGGGATGTGTCGGCGAGGCTGACGTGGAAGGATCTGACAGTGATGGTGACTCTGAGCAACGGTGAGACTCAGACGGTTTTGGAGGGTTTAACTGGTTATGCAGAGCCTGGAAGCTTCACAGCTCTGATGGGCCCTTCTGGTTCCGGCAAATCAACCTTGCTTGATGCTCTCTCTAGCCGTTTGGCTTCCAATGCCTTCCTTTCTGGCTCTGTTTTACTCAATGGCCGCAGAAGAAAGCTCTCTTTCGGCACTGCTGCATATGTGACACAAGATGACAATTTGATTGGGACTCTGACTGTAAGAGAGACGATATCGTACTCGGCTAGATTGAGGCTGCCGGATAAGATGGGGAGGTCGGAGAAGCGAGCACTGGTGGAGAGGACAATCATAGAAATGGGTCTGCAGGATTGCGCCGATACAGTTATTGGGAATTGGCATTTGCGTGGGATCAGTGGGGGAGAAAAGAGAAGGGTCAGCATTGCTGTGGAGATCTTGATGAGGCCTAGATTGCTCTTTCTTGATGAGCCAACCAGTGGACTGGATAGTGCTTCAGCATTTTTCGTAACACAGACACTACGTGCTCTATCACGAGATGGAAGGACTGTGATAGCTTCAATTCACCAGCCAAGCAGTGAAGTCTTTGAACTATTTGATCAACTGTACTTGCTTTCTGGTGGCAAAACAGTTTACTTTGGTCAGGCCTCTGAGGCATATGAGTTCTTTTCACAAGCTGGTTTTCCCTGCCCTGCTTTGAGGAATCCATCTGATCATTTTCTTAGATGTGTAAACTCTGACTTTGATAAAGTAAAGGCCACACTGAAAGGGTCCATGAAACTCAGGTTTGAGGCAAGCGATGATCCTGTGGAGAAGATTACCACCGCTGAAGCTATAAGAGTCCTTGTTGATTCCTATCGTAGCTCGCAATACTCTTATGCAGCTACAGAAAAAGTTGCAGAGATATCCAAAGTTAAAGGGACTGTTTTAGACTCTGGAGGAAGTCAGGCTAGTTTCCTAAGGCAGACCTTCACATTGACAAAGCGTTCATTTGTCAACATGTCAAGGGACTTTGGCTATTACTGGCTTAGGCTTGCCATTTACATTGTTGTTGTAGTTTGTATCGGAACCATCTATCTGAATATTGGAACTGGTTACGCTTCGATTCTGGCAAGGGGTTCATGTGCATCTTTTGTTTTTGGTTTTGTCACTTTCATGTCAATTGGCGGGTTTCCTTCATTTGTAGAGGATATGAAGGTTTTCCAAAGAGAGAGGTTGAATGGTCACTATGGTGTCACTGCCTTTGTCCTCAGCAACACATTCTCTGCAATGCCATTCCTGATACTGATTACCTTTCTGGCCGGAACTATCTGTTACTTCATGGTCGGTCTCCATCCAGGCTTCGAGCATTACTTCTTCTTTGTGGCGTGCCTCTATGCATGTGTCACTGTAGTTGAGAGCTTGATGATGGCGATAGCGAGCGTTATTCCTAACTTCCTCATGGGTATCATCATAGGGGCCGGAATTCAGGGCATATTCATGCTAGTCTCCGGCTACTTCAGGCTACCAAATGACATCCCTAAGCCAGTCTGGCGTTACCCGATGTCATACATCAGCTTCCACTTCTGGGCTCTACAGGGTCAATATCAGAATGACTTGGCCGGCTTAATGTTTGACAATGAGACACCGGATCAAATTAAGATACCAGGTGACTACATCCTAGTAAATGTGTTCCAGATTGACACCAGCAGATCAAAATGGATAGACCTTGGTGTTATATTCAGCATGATTGTTGCCTACCGGATCATCTTTTTCGTCATGATCAAGTACAATGAGGATGTCTCACCTTGGATTCGAGGTTATATGGCGAGGAGAAGACTGCAACAGAAAAATGCCATCCAAAACACAAATATTGCCCCTGATGGTCTCACACAGTCCCCTTCTTTGAGGACCTATGCAACTGGTAAAAGATTGACGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0010035 GO:0010038 GO:0010228 GO:0016491 GO:0016722 GO:0022414 GO:0032501 GO:0032502 GO:0042221 GO:0046688 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

706

Amino Acids

78.3

Weight (kDa)

8.86

Isoelectric Point (pI)

42.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	76 - 226	1.6e-24	ABC transporter
AAA_29	PF13555	87 - 111	2.6e-06	P-loop containing region of AAA domain
ABC2_membrane_7	PF19055	255 - 310	7.7e-09	ABC-2 type transporter
ABC2_membrane	PF01061	387 - 597	9.2e-40	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09220 AT3G09220
fragaria_vesca	FvH4_6g12410 FvH4_6g12430 FvH4_6g12430
malus_domestica	MD04G1142300.v1.1 MD04G1142400.v1.1 MD04G1142600.v1.1 MD04G1142900.v1.1 MD12G1157000.v1.1 MD12G1157100.v1.1 MD12G1157900.v1.1 MD16G1147100.v1.1
prunus_persica	Prupe.6G267700_v2.0.a1
pyrus_communis	pycom04g12930 pycom04g12940 pycom04g12950 pycom04g12960 pycom04g12970 pycom04g12980 pycom12g14940
rosa_chinensis	RchiOBHm_Chr3g0464241
rosa_laevigata	RLG00000024714 RLG00000036611
rosa_multiflora	Rmu_sc0005961.1_g000011 Rmu_sc0007811.1_g000009
rosa_roxburghii	Rroxscaffold_1G00005620 Rroxscaffold_6G00415910
rosa_rugosa	Rorug03G0071000
rosa_samantha	Rh3DG134200 Rh5AG501600 Rh5CG547100
rosa_wichuraiana	Rw3G010860 Rw5G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	677
AciI	CCGC	3 cut(s)	370, 1023, 1365
AclWI	GGATC	5 cut(s)	183, 599, 995, 1836, 1949
AcoI	YGGCCR	3 cut(s)	367, 1497, 1797
AcsI	RAATTY	1 cut(s)	1662
AcuI	CTGAAG	3 cut(s)	678, 1047, 1681
AdeI	CACNNNGTG	1 cut(s)	722
AfaI	GTAC	3 cut(s)	461, 806, 1967
AfiI	CCNNNNNNNGG	2 cut(s)	677, 1765
AflIII	ACRYGT	1 cut(s)	1197
AgsI	TTSAA	3 cut(s)	759, 788, 1417
AjiI	CACGTC	1 cut(s)	168
AjnI	CCWGG	3 cut(s)	250, 1534, 1843
AleI	CACNNNNGTG	1 cut(s)	1428
Alw21I	GWGCWC	2 cut(s)	514, 727
Alw26I	GTCTC	8 cut(s)	101, 203, 443, 1532, 1690, 1814, 1984, 2069
AlwI	GGATC	5 cut(s)	183, 599, 995, 1836, 1949
AlwNI	CAGNNNCTG	1 cut(s)	251
ApaI	GGGCCC	1 cut(s)	278
ApeKI	GCWGC	5 cut(s)	23, 54, 398, 478, 1079
ApoI	RAATTY	1 cut(s)	1662
Asp700I	GAANNNNTTC	1 cut(s)	1397
AspLEI	GCGC	1 cut(s)	557
AspS9I	GGNCC	5 cut(s)	274, 275, 969, 1656, 2088
AsuHPI	GGTGA	5 cut(s)	202, 218, 755, 1859, 1974
AvaII	GGWCC	2 cut(s)	969, 2088
AxyI	CCTNAGG	1 cut(s)	1157
BaeGI	GKGCMC	1 cut(s)	278
BanII	GRGCYC	2 cut(s)	278, 1771
BauI	CACGAG	1 cut(s)	732
BbsI	GAAGAC	1 cut(s)	2020
Bbv12I	GWGCWC	2 cut(s)	514, 727
BbvCI	CCTCAGC	1 cut(s)	1448
BbvI	GCAGC	5 cut(s)	35, 66, 385, 465, 1091
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	3 cut(s)	252, 1536, 1845
BclI	TGATCA	3 cut(s)	796, 910, 1959
BcoDI	GTCTC	8 cut(s)	101, 203, 443, 1532, 1690, 1814, 1984, 2069
BfaI	CTAG	6 cut(s)	318, 468, 648, 1149, 1682, 1859
BfmI	CTRYAG	4 cut(s)	545, 1083, 1587, 1772
BglI	GCCNNNNNGGC	2 cut(s)	851, 1729
BglII	AGATCT	1 cut(s)	633
BisI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1080
BlsI	GCNGC	6 cut(s)	25, 56, 371, 400, 480, 1081
Bme1390I	CCNGG	3 cut(s)	252, 1536, 1845
Bme18I	GGWCC	2 cut(s)	969, 2088
BmgBI	CACGTC	1 cut(s)	168
BmgT120I	GGNCC	5 cut(s)	274, 275, 969, 1656, 2088
BmiI	GGNNCC	5 cut(s)	276, 286, 970, 1267, 1657
BmrFI	CCNGG	3 cut(s)	252, 1536, 1845
BmsI	GCATC	2 cut(s)	298, 1334
BpiI	GAAGAC	1 cut(s)	2020
BplI	GAGNNNNNCTC	4 cut(s)	94, 126, 1964, 1996
BpmI	CTGGAG	1 cut(s)	1155
Bpu10I	CCTNAGC	3 cut(s)	1226, 1448, 1719
BsaAI	YACGTR	1 cut(s)	722
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaI	GGTCTC	2 cut(s)	1532, 2069
BsaJI	CCNNGG	2 cut(s)	1906, 1985
BsaWI	WCCGGW	2 cut(s)	1825, 1938
Bsc4I	CCNNNNNNNGG	2 cut(s)	677, 1765
Bse118I	RCCGGY	1 cut(s)	1799
Bse1I	ACTGG	9 cut(s)	129, 241, 519, 675, 687, 1226, 1294, 1724, 2104
Bse21I	CCTNAGG	1 cut(s)	1157
Bse3DI	GCAATG	2 cut(s)	621, 1473
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	3 cut(s)	252, 1536, 1845
BseDI	CCNNGG	2 cut(s)	1906, 1985
BseGI	GGATG	6 cut(s)	154, 1531, 1713, 1854, 1981, 2034
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	2 cut(s)	677, 1765
BseMI	GCAATG	2 cut(s)	621, 1473
BseMII	CTCAG	6 cut(s)	92, 188, 227, 840, 994, 1462
BseNI	ACTGG	9 cut(s)	129, 241, 519, 675, 687, 1226, 1294, 1724, 2104
BseRI	GAGGAG	1 cut(s)	2023
BseSI	GKGCMC	1 cut(s)	278
BseXI	GCAGC	5 cut(s)	35, 66, 385, 465, 1091
BseYI	CCCAGC	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	514, 727
BsiSI	CCGG	8 cut(s)	288, 482, 1500, 1659, 1689, 1800, 1826, 1939
BslFI	GGGAC	4 cut(s)	445, 1132, 1220, 2059
BslI	CCNNNNNNNGG	2 cut(s)	677, 1765
BsmAI	GTCTC	8 cut(s)	101, 203, 443, 1532, 1690, 1814, 1984, 2069
BsmBI	CGTCTC	1 cut(s)	443
BsmFI	GGGAC	4 cut(s)	445, 1132, 1220, 2059
Bso31I	GGTCTC	2 cut(s)	1532, 2069
Bsp120I	GGGCCC	1 cut(s)	274
Bsp1286I	GDGCHC	4 cut(s)	278, 514, 727, 1771
BspACI	CCGC	3 cut(s)	370, 1023, 1365
BspCNI	CTCAG	6 cut(s)	93, 189, 226, 841, 993, 1461
BspHI	TCATGA	1 cut(s)	1956
BspLI	GGNNCC	5 cut(s)	276, 286, 970, 1267, 1657
BspMAI	CTGCAG	1 cut(s)	549
BspPI	GGATC	5 cut(s)	183, 599, 995, 1836, 1949
BspTNI	GGTCTC	2 cut(s)	1532, 2069
BsrDI	GCAATG	2 cut(s)	621, 1473
BsrFI	RCCGGY	1 cut(s)	1799
BsrI	ACTGG	9 cut(s)	129, 241, 519, 675, 687, 1226, 1294, 1724, 2104
BssAI	RCCGGY	1 cut(s)	1799
BssECI	CCNNGG	2 cut(s)	1906, 1985
BssSI	CACGAG	1 cut(s)	732
BssT1I	CCWWGG	2 cut(s)	1906, 1985
Bst2BI	CACGAG	1 cut(s)	732
Bst2UI	CCWGG	3 cut(s)	252, 1536, 1845
Bst6I	CTCTTC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	32
BstBAI	YACGTR	1 cut(s)	722
BstC8I	GCNNGC	7 cut(s)	510, 994, 1064, 1233, 1567, 1618, 1801
BstF5I	GGATG	6 cut(s)	154, 1531, 1713, 1854, 1981, 2034
BstHHI	GCGC	1 cut(s)	557
BstMAI	GTCTC	8 cut(s)	101, 203, 443, 1532, 1690, 1814, 1984, 2069
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 851, 1729
BstNI	CCWGG	3 cut(s)	252, 1536, 1845
BstNSI	RCATGY	2 cut(s)	1201, 1581
BstSCI	CCNGG	3 cut(s)	250, 1534, 1843
BstSFI	CTRYAG	4 cut(s)	545, 1083, 1587, 1772
BstSLI	GKGCMC	1 cut(s)	278
BstV1I	GCAGC	5 cut(s)	35, 66, 385, 465, 1091
BstV2I	GAAGAC	1 cut(s)	2020
BstX2I	RGATCY	2 cut(s)	175, 633
BstXI	CCANNNNNNTGG	1 cut(s)	682
BstYI	RGATCY	2 cut(s)	175, 633
Bsu36I	CCTNAGG	1 cut(s)	1157
BtgZI	GCGATG	1 cut(s)	1011
BtrI	CACGTC	1 cut(s)	168
BtsCI	GGATG	6 cut(s)	154, 1531, 1713, 1854, 1981, 2034
BtsI	GCAGTG	3 cut(s)	393, 781, 1434
Cac8I	GCNNGC	7 cut(s)	510, 994, 1064, 1233, 1567, 1618, 1801
CaiI	CAGNNNCTG	1 cut(s)	251
CciI	TCATGA	1 cut(s)	1956
CfoI	GCGC	1 cut(s)	557
Cfr10I	RCCGGY	1 cut(s)	1799
Cfr13I	GGNCC	5 cut(s)	274, 275, 969, 1656, 2088
CsiI	ACCWGGT	1 cut(s)	1843
Csp6I	GTAC	3 cut(s)	460, 805, 1966
CviQI	GTAC	3 cut(s)	460, 805, 1966
DraIII	CACNNNGTG	1 cut(s)	722
EaeI	YGGCCR	3 cut(s)	367, 1497, 1797
Eam1104I	CTCTTC	1 cut(s)	5
EarI	CTCTTC	1 cut(s)	5
Eco130I	CCWWGG	2 cut(s)	1906, 1985
Eco147I	AGGCCT	3 cut(s)	62, 646, 845
Eco24I	GRGCYC	2 cut(s)	278, 1771
Eco31I	GGTCTC	2 cut(s)	1532, 2069
Eco32I	GATATC	2 cut(s)	456, 1104
Eco47I	GGWCC	2 cut(s)	969, 2088
Eco57I	CTGAAG	3 cut(s)	678, 1047, 1681
Eco81I	CCTNAGG	1 cut(s)	1157
EcoO109I	RGGNCCY	2 cut(s)	275, 2088
EcoRI	GAATTC	1 cut(s)	1662
EcoRII	CCWGG	3 cut(s)	250, 1534, 1843
EcoRV	GATATC	2 cut(s)	456, 1104
EcoT14I	CCWWGG	2 cut(s)	1906, 1985
EcoT22I	ATGCAT	1 cut(s)	1579
EcoT38I	GRGCYC	2 cut(s)	278, 1771
ErhI	CCWWGG	2 cut(s)	1906, 1985
Esp3I	CGTCTC	1 cut(s)	443
FaqI	GGGAC	4 cut(s)	445, 1132, 1220, 2059
FauI	CCCGC	1 cut(s)	1358
FauNDI	CATATG	2 cut(s)	403, 856
FbaI	TGATCA	3 cut(s)	796, 910, 1959
Fnu4HI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1080
FokI	GGATG	6 cut(s)	161, 1518, 1700, 1841, 1988, 2021
FriOI	GRGCYC	2 cut(s)	278, 1771
Fsp4HI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1080
FspBI	CTAG	6 cut(s)	318, 468, 648, 1149, 1682, 1859
GlaI	GCGC	1 cut(s)	556
GluI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1080
GsaI	CCCAGC	1 cut(s)	23
GsuI	CTGGAG	1 cut(s)	1155
HapII	CCGG	8 cut(s)	288, 482, 1500, 1659, 1689, 1800, 1826, 1939
HhaI	GCGC	1 cut(s)	557
Hin6I	GCGC	1 cut(s)	555
HinP1I	GCGC	1 cut(s)	555
HincII	GTYRAC	1 cut(s)	1195
HindII	GTYRAC	1 cut(s)	1195
HindIII	AAGCTT	1 cut(s)	256
HpaII	CCGG	8 cut(s)	288, 482, 1500, 1659, 1689, 1800, 1826, 1939
HphI	GGTGA	5 cut(s)	202, 218, 755, 1859, 1974
Hpy166II	GTNNAC	5 cut(s)	89, 680, 832, 931, 1195
Hpy188III	TCNNGA	8 cut(s)	66, 637, 662, 732, 1134, 1477, 1873, 1957
Hpy8I	GTNNAC	5 cut(s)	89, 680, 832, 931, 1195
HpyCH4IV	ACGT	2 cut(s)	167, 721
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 851, 1729
HpySE526I	ACGT	2 cut(s)	167, 721
HspAI	GCGC	1 cut(s)	555
KroI	GCCGGC	1 cut(s)	1799
KroNI	GCCGGC	1 cut(s)	1801
Ksp22I	TGATCA	3 cut(s)	796, 910, 1959
Lsp1109I	GCAGC	5 cut(s)	35, 66, 385, 465, 1091
LweI	GCATC	2 cut(s)	298, 1334
MabI	ACCWGGT	1 cut(s)	1843
MaeI	CTAG	6 cut(s)	318, 468, 648, 1149, 1682, 1859
MaeII	ACGT	2 cut(s)	167, 721
MboII	GAAGA	5 cut(s)	22, 387, 1024, 1546, 2025
MfeI	CAATTG	1 cut(s)	1359
MflI	RGATCY	2 cut(s)	175, 633
MhlI	GDGCHC	4 cut(s)	278, 514, 727, 1771
MluCI	AATT	6 cut(s)	421, 574, 759, 1359, 1662, 1833
MlyI	GAGTC	6 cut(s)	103, 187, 205, 427, 1047, 1124
MmeI	TCCRAC	1 cut(s)	480
Mph1103I	ATGCAT	1 cut(s)	1579
MroNI	GCCGGC	1 cut(s)	1799
MroXI	GAANNNNTTC	1 cut(s)	1397
MseI	TTAA	4 cut(s)	233, 1113, 1805, 1836
MslI	CAYNNNNRTG	6 cut(s)	536, 585, 626, 1352, 1428, 1676
MspA1I	CMGCKG	1 cut(s)	1025
MspI	CCGG	8 cut(s)	288, 482, 1500, 1659, 1689, 1800, 1826, 1939
MspR9I	CCNGG	3 cut(s)	252, 1536, 1845
MunI	CAATTG	1 cut(s)	1359
MvaI	CCWGG	3 cut(s)	252, 1536, 1845
MwoI	GCNNNNNNNGC	5 cut(s)	32, 335, 652, 851, 1729
NaeI	GCCGGC	1 cut(s)	1801
NdeI	CATATG	2 cut(s)	403, 856
NgoMIV	GCCGGC	1 cut(s)	1799
NlaIV	GGNNCC	5 cut(s)	276, 286, 970, 1267, 1657
NmeAIII	GCCGAG	1 cut(s)	443
NmuCI	GTSAC	7 cut(s)	190, 406, 1345, 1421, 1432, 1582, 1847
NsiI	ATGCAT	1 cut(s)	1579
NspI	RCATGY	2 cut(s)	1201, 1581
OliI	CACNNNNGTG	1 cut(s)	1428
PagI	TCATGA	1 cut(s)	1956
PceI	AGGCCT	3 cut(s)	62, 646, 845
PciI	ACATGT	1 cut(s)	1197
PdiI	GCCGGC	1 cut(s)	1801
PdmI	GAANNNNTTC	1 cut(s)	1397
PfeI	GAWTC	4 cut(s)	901, 1049, 1303, 1990
PflFI	GACNNNGTC	1 cut(s)	93
PflMI	CCANNNNNTGG	1 cut(s)	677
PkrI	GCNGC	6 cut(s)	25, 56, 371, 400, 480, 1081
PleI	GAGTC	6 cut(s)	103, 187, 205, 427, 1046, 1124
PpsI	GAGTC	6 cut(s)	103, 187, 205, 427, 1046, 1124
Ppu21I	YACGTR	1 cut(s)	722
PpuMI	RGGWCCY	1 cut(s)	2088
PscI	ACATGT	1 cut(s)	1197
Psp5II	RGGWCCY	1 cut(s)	2088
Psp6I	CCWGG	3 cut(s)	250, 1534, 1843
PspFI	CCCAGC	1 cut(s)	19
PspGI	CCWGG	3 cut(s)	250, 1534, 1843
PspN4I	GGNNCC	5 cut(s)	276, 286, 970, 1267, 1657
PspOMI	GGGCCC	1 cut(s)	274
PspPI	GGNCC	5 cut(s)	274, 275, 969, 1656, 2088
PspPPI	RGGWCCY	1 cut(s)	2088
PstI	CTGCAG	1 cut(s)	549
PstNI	CAGNNNCTG	1 cut(s)	251
PsuI	RGATCY	2 cut(s)	175, 633
PsyI	GACNNNGTC	1 cut(s)	93
RsaI	GTAC	3 cut(s)	461, 806, 1967
RsaNI	GTAC	3 cut(s)	460, 805, 1966
RseI	CAYNNNNRTG	6 cut(s)	536, 585, 626, 1352, 1428, 1676
SaqAI	TTAA	4 cut(s)	233, 1113, 1805, 1836
SatI	GCNGC	6 cut(s)	24, 55, 370, 399, 479, 1080
Sau96I	GGNCC	5 cut(s)	274, 275, 969, 1656, 2088
SchI	GAGTC	6 cut(s)	103, 187, 205, 427, 1047, 1124
ScrFI	CCNGG	3 cut(s)	252, 1536, 1845
SduI	GDGCHC	4 cut(s)	278, 514, 727, 1771
SexAI	ACCWGGT	1 cut(s)	1843
SfaNI	GCATC	2 cut(s)	298, 1334
SfcI	CTRYAG	4 cut(s)	545, 1083, 1587, 1772
SinI	GGWCC	2 cut(s)	969, 2088
SmiMI	CAYNNNNRTG	6 cut(s)	536, 585, 626, 1352, 1428, 1676
Sse9I	AATT	6 cut(s)	421, 574, 759, 1359, 1662, 1833
SseBI	AGGCCT	3 cut(s)	62, 646, 845
SsiI	CCGC	3 cut(s)	370, 1023, 1365
SspI	AATATT	2 cut(s)	1282, 2050
SspMI	CTAG	6 cut(s)	318, 468, 648, 1149, 1682, 1859
StuI	AGGCCT	3 cut(s)	62, 646, 845
StyD4I	CCNGG	3 cut(s)	250, 1534, 1843
StyI	CCWWGG	2 cut(s)	1906, 1985
TaiI	ACGT	2 cut(s)	170, 724
TaqI	TCGA	3 cut(s)	1301, 1542, 1993
TaqII	GACCGA	1 cut(s)	1514
TasI	AATT	6 cut(s)	421, 574, 759, 1359, 1662, 1833
TatI	WGTACW	2 cut(s)	804, 1965
TauI	GCSGC	1 cut(s)	372
TfiI	GAWTC	4 cut(s)	901, 1049, 1303, 1990
Tru1I	TTAA	4 cut(s)	233, 1113, 1805, 1836
Tru9I	TTAA	4 cut(s)	233, 1113, 1805, 1836
TseFI	GTSAC	7 cut(s)	190, 406, 1345, 1421, 1432, 1582, 1847
TseI	GCWGC	5 cut(s)	23, 54, 398, 478, 1079
Tsp45I	GTSAC	7 cut(s)	190, 406, 1345, 1421, 1432, 1582, 1847
TspDTI	ATGAA	8 cut(s)	989, 1176, 1308, 1342, 1365, 1406, 1507, 1666
TspGWI	ACGGA	1 cut(s)	20
Tth111I	GACNNNGTC	1 cut(s)	93
Van91I	CCANNNNNTGG	1 cut(s)	677
VpaK11BI	GGWCC	2 cut(s)	969, 2088
XapI	RAATTY	1 cut(s)	1662
XceI	RCATGY	2 cut(s)	1201, 1581
XmnI	GAANNNNTTC	1 cut(s)	1397
XspI	CTAG	6 cut(s)	318, 468, 648, 1149, 1682, 1859
Zsp2I	ATGCAT	1 cut(s)	1579

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.