AT3G09820

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0002092
Physical Location & Seq
Forward (+)
3011780 .. 3014944
3165 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G09820.2

Sequence Viewer

Length: 1035 bp
ATGGCTTCCTCTGATTTCGATGGAATCCTTTTGGGAATGGGAAACCCACTCCTCGACGTCTCTGCCGTCGTCGACCAACAGTTTCTCGACAAATACGACATCAAATTGAACAATGCGATTCTCGCAGAGGACAAACATTTGCCCATGTACGATGAAATGAGCCAGAAGTTCAATGTTGAATACATTGCTGGAGGTGCTACCCAGAACTCAATCAAAGTGGCCCAGTGGATGCTTCAAGTTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAAATACGGAGAGGCAATGAAGAAGGATGCTACAGCAGCTGGTGTCTATGTCCACTATTACGAAGATGAGGCAACACCTACCGGAACTTGCGGTGTCTGTGTTCTTGGTGGAGAAAGATCGCTCATTGCCAATCTTTCTGCTGCTAATTGCTACAAGGTTGAACACTTGAAGAAGCCTGAGAACTGGGCTCTGGTTGAGAAGGCCAAGTTTTATTACATTGCTGGATTCTTCCTCACGGTATCACCAGAATCCATTCAGTTGGTACGTGAACATGCTGCTGCAAACAACAAGGTGTTCACGATGAACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATGTTCAGGAGAAGTGCCTGCCGTACATGGACTATATTTTTGGCAATGAGACCGAGGCAAGAACCTTCTCCAGGGTTCACGGCTGGGAGACTGATGATGTTGAGCAAATAGCCATCAAGATGTCCCAGTTACCCAAAGCCTCTGGAACATACAAGAGGACTACTGTGATTACACAAGGCGCAGATCCTGTGGTTGTCGCTGAGGATGGAAAAGTGAAGAAGTACCCAGTCATCCCTCTCCCCAAAGAGAAGCTTGTTGACACCAACGGTGCAGGTGATGCATTTGTGGGAGGGTTTCTGTCCCAGCTGGTGCACGGAAAGGGGATTGAAGAGTGTGTGAGGGCAGGATGCTACGCGTCAAACGTAGTGATCCAGAGGTCTGGTTGCACTTACCCTGAGAAACCAGACTTCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

344

Amino Acids

37.84

Weight (kDa)

5.29

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 8 - 296 2.7e-71 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 881
AatII GACGTC 1 cut(s) 60
Acc36I ACCTGC 1 cut(s) 881
AccI GTMKAC 1 cut(s) 72
AccII CGCG 1 cut(s) 974
AciI CCGC 1 cut(s) 369
AclWI GGATC 4 cut(s) 258, 271, 797, 982
AcsI RAATTY 1 cut(s) 608
AcyI GRCGYC 1 cut(s) 57
AfaI GTAC 4 cut(s) 149, 543, 644, 842
AfiI CCNNNNNNNGG 1 cut(s) 690
AflIII ACRYGT 1 cut(s) 972
AgsI TTSAA 9 cut(s) 109, 172, 179, 236, 440, 448, 616, 947, 1030
AjnI CCWGG 2 cut(s) 241, 689
AluBI AGCT 3 cut(s) 317, 871, 925
AluI AGCT 3 cut(s) 317, 871, 925
Alw21I GWGCWC 1 cut(s) 933
Alw26I GTCTC 3 cut(s) 64, 662, 701
Alw44I GTGCAC 1 cut(s) 929
AlwI GGATC 4 cut(s) 258, 271, 797, 982
AlwNI CAGNNNCTG 2 cut(s) 317, 806
AoxI GGCC 2 cut(s) 219, 480
ApaLI GTGCAC 1 cut(s) 929
ApeKI GCWGC 4 cut(s) 314, 419, 554, 557
ApoI RAATTY 1 cut(s) 608
ArsI GACNNNNNNTTYG 2 cut(s) 641, 673
Asp700I GAANNNNTTC 1 cut(s) 531
AspLEI GCGC 1 cut(s) 800
AspS9I GGNCC 1 cut(s) 220
AsuHPI GGTGA 2 cut(s) 513, 905
BaeGI GKGCMC 1 cut(s) 933
BamHI GGATCC 1 cut(s) 263
BanII GRGCYC 1 cut(s) 469
Bbv12I GWGCWC 1 cut(s) 933
BbvCI CCTCAGC 1 cut(s) 819
BbvI GCAGC 4 cut(s) 326, 406, 541, 544
BccI CCATC 3 cut(s) 14, 740, 818
BceAI ACGGC 3 cut(s) 50, 625, 715
BcgI CGANNNNNNTGC 2 cut(s) 44, 78
BciT130I CCWGG 2 cut(s) 243, 691
BcoDI GTCTC 3 cut(s) 64, 662, 701
BfmI CTRYAG 1 cut(s) 309
BfuAI ACCTGC 1 cut(s) 881
BisI GCNGC 4 cut(s) 315, 420, 555, 558
BlsI GCNGC 4 cut(s) 316, 421, 556, 559
Bme1390I CCNGG 2 cut(s) 243, 691
BmgT120I GGNCC 1 cut(s) 220
BmiI GGNNCC 1 cut(s) 265
BmrFI CCNGG 2 cut(s) 243, 691
BmrI ACTGGG 4 cut(s) 217, 472, 739, 839
BmsI GCATC 4 cut(s) 219, 295, 886, 956
BmuI ACTGGG 4 cut(s) 217, 472, 739, 839
BpmI CTGGAG 2 cut(s) 210, 673
Bpu10I CCTNAGC 1 cut(s) 819
BsaAI YACGTR 1 cut(s) 545
BsaHI GRCGYC 1 cut(s) 57
BsaI GGTCTC 1 cut(s) 662
BsaJI CCNNGG 3 cut(s) 242, 672, 690
BsaWI WCCGGW 1 cut(s) 359
Bsc4I CCNNNNNNNGG 1 cut(s) 690
Bse1I ACTGG 5 cut(s) 223, 252, 467, 745, 845
Bse3DI GCAATG 5 cut(s) 183, 300, 402, 495, 670
BseBI CCWGG 2 cut(s) 243, 691
BseDI CCNNGG 3 cut(s) 242, 672, 690
BseGI GGATG 5 cut(s) 234, 310, 829, 849, 971
BseLI CCNNNNNNNGG 1 cut(s) 690
BseMI GCAATG 5 cut(s) 183, 300, 402, 495, 670
BseMII CTCAG 3 cut(s) 447, 810, 1005
BseNI ACTGG 5 cut(s) 223, 252, 467, 745, 845
BseRI GAGGAG 1 cut(s) 41
BseSI GKGCMC 1 cut(s) 933
BseXI GCAGC 4 cut(s) 326, 406, 541, 544
BseYI CCCAGC 2 cut(s) 702, 921
BsgI GTGCAG 1 cut(s) 909
Bsh1236I CGCG 1 cut(s) 974
BshFI GGCC 2 cut(s) 221, 482
BsiHKAI GWGCWC 1 cut(s) 933
BsiSI CCGG 1 cut(s) 360
BslFI GGGAC 2 cut(s) 727, 904
BslI CCNNNNNNNGG 1 cut(s) 690
BsmAI GTCTC 3 cut(s) 64, 662, 701
BsmBI CGTCTC 1 cut(s) 64
BsmFI GGGAC 2 cut(s) 727, 904
BsnI GGCC 2 cut(s) 221, 482
Bso31I GGTCTC 1 cut(s) 662
Bsp1286I GDGCHC 2 cut(s) 469, 933
Bsp143I GATC 4 cut(s) 263, 395, 802, 987
BspACI CCGC 1 cut(s) 369
BspANI GGCC 2 cut(s) 221, 482
BspCNI CTCAG 3 cut(s) 448, 811, 1006
BspFNI CGCG 1 cut(s) 974
BspLI GGNNCC 1 cut(s) 265
BspMI ACCTGC 1 cut(s) 881
BspPI GGATC 4 cut(s) 258, 271, 797, 982
BspTNI GGTCTC 1 cut(s) 662
BsrDI GCAATG 5 cut(s) 183, 300, 402, 495, 670
BsrI ACTGG 5 cut(s) 223, 252, 467, 745, 845
BssECI CCNNGG 3 cut(s) 242, 672, 690
BssMI GATC 4 cut(s) 263, 395, 802, 987
BssNI GRCGYC 1 cut(s) 57
Bst2UI CCWGG 2 cut(s) 243, 691
Bst4CI ACNGT 4 cut(s) 81, 517, 784, 887
Bst6I CTCTTC 1 cut(s) 942
BstACI GRCGYC 1 cut(s) 57
BstAPI GCANNNNNTGC 1 cut(s) 896
BstBAI YACGTR 1 cut(s) 545
BstC8I GCNNGC 1 cut(s) 638
BstDEI CTNAG 3 cut(s) 456, 819, 1014
BstENI CCTNNNNNAGG 1 cut(s) 688
BstF5I GGATG 5 cut(s) 234, 310, 829, 849, 971
BstFNI CGCG 1 cut(s) 974
BstHHI GCGC 1 cut(s) 800
BstKTI GATC 4 cut(s) 266, 398, 805, 990
BstMAI GTCTC 3 cut(s) 64, 662, 701
BstMBI GATC 4 cut(s) 263, 395, 802, 987
BstMWI GCNNNNNNNGC 4 cut(s) 122, 194, 314, 896
BstNI CCWGG 2 cut(s) 243, 691
BstNSI RCATGY 1 cut(s) 554
BstSCI CCNGG 2 cut(s) 241, 689
BstSFI CTRYAG 1 cut(s) 309
BstSLI GKGCMC 1 cut(s) 933
BstUI CGCG 1 cut(s) 974
BstV1I GCAGC 4 cut(s) 326, 406, 541, 544
BstX2I RGATCY 2 cut(s) 263, 802
BstXI CCANNNNNNTGG 3 cut(s) 259, 538, 998
BstYI RGATCY 2 cut(s) 263, 802
BsuRI GGCC 2 cut(s) 221, 482
BtsCI GGATG 5 cut(s) 234, 310, 829, 849, 971
BtsIMutI CAGTG 1 cut(s) 230
BveI ACCTGC 1 cut(s) 881
Cac8I GCNNGC 1 cut(s) 638
CaiI CAGNNNCTG 2 cut(s) 317, 806
CfoI GCGC 1 cut(s) 800
Cfr13I GGNCC 1 cut(s) 220
CseI GACGC 1 cut(s) 963
Csp6I GTAC 4 cut(s) 148, 542, 643, 841
CspCI CAANNNNNGTGG 2 cut(s) 198, 233
CviAII CATG 4 cut(s) 145, 259, 551, 646
CviQI GTAC 4 cut(s) 148, 542, 643, 841
DdeI CTNAG 3 cut(s) 456, 819, 1014
DpnI GATC 4 cut(s) 265, 397, 804, 989
DpnII GATC 4 cut(s) 263, 395, 802, 987
Eam1104I CTCTTC 1 cut(s) 942
EarI CTCTTC 1 cut(s) 942
Eco24I GRGCYC 1 cut(s) 469
Eco31I GGTCTC 1 cut(s) 662
EcoNI CCTNNNNNAGG 1 cut(s) 688
EcoRI GAATTC 1 cut(s) 608
EcoRII CCWGG 2 cut(s) 241, 689
EcoT22I ATGCAT 1 cut(s) 901
EcoT38I GRGCYC 1 cut(s) 469
Esp3I CGTCTC 1 cut(s) 64
FaeI CATG 4 cut(s) 148, 262, 554, 649
FaiI YATR 7 cut(s) 146, 260, 327, 552, 647, 654, 769
FalI AAGNNNNNCTT 2 cut(s) 855, 887
FaqI GGGAC 2 cut(s) 727, 904
FatI CATG 4 cut(s) 144, 258, 550, 645
FblI GTMKAC 1 cut(s) 72
Fnu4HI GCNGC 4 cut(s) 315, 420, 555, 558
FokI GGATG 5 cut(s) 241, 317, 836, 836, 978
FriOI GRGCYC 1 cut(s) 469
Fsp4HI GCNGC 4 cut(s) 315, 420, 555, 558
GlaI GCGC 1 cut(s) 799
GluI GCNGC 4 cut(s) 315, 420, 555, 558
GsaI CCCAGC 2 cut(s) 706, 925
GsuI CTGGAG 2 cut(s) 210, 673
HaeIII GGCC 2 cut(s) 221, 482
HapII CCGG 1 cut(s) 360
HgaI GACGC 1 cut(s) 963
HhaI GCGC 1 cut(s) 800
Hin1I GRCGYC 1 cut(s) 57
Hin1II CATG 4 cut(s) 148, 262, 554, 649
Hin6I GCGC 1 cut(s) 798
HinP1I GCGC 1 cut(s) 798
HincII GTYRAC 2 cut(s) 73, 877
HindII GTYRAC 2 cut(s) 73, 877
HindIII AAGCTT 1 cut(s) 869
HinfI GANTC 4 cut(s) 24, 118, 504, 527
HpaII CCGG 1 cut(s) 360
HphI GGTGA 2 cut(s) 513, 905
Hpy166II GTNNAC 7 cut(s) 73, 331, 548, 576, 697, 877, 931
Hpy188I TCNGA 1 cut(s) 13
Hpy188III TCNNGA 6 cut(s) 86, 577, 626, 736, 762, 991
Hpy8I GTNNAC 7 cut(s) 73, 331, 548, 576, 697, 877, 931
Hpy99I CGWCG 3 cut(s) 59, 71, 74
HpyAV CCTTC 3 cut(s) 295, 472, 694
HpyCH4III ACNGT 4 cut(s) 81, 517, 784, 887
HpyCH4IV ACGT 3 cut(s) 57, 544, 981
HpyCH4V TGCA 5 cut(s) 560, 890, 899, 931, 1005
HpyF10VI GCNNNNNNNGC 4 cut(s) 122, 194, 314, 896
HpyF3I CTNAG 3 cut(s) 456, 819, 1014
HpySE526I ACGT 3 cut(s) 57, 544, 981
Hsp92I GRCGYC 1 cut(s) 57
Hsp92II CATG 4 cut(s) 148, 262, 554, 649
HspAI GCGC 1 cut(s) 798
Kzo9I GATC 4 cut(s) 263, 395, 802, 987
LmnI GCTCC 1 cut(s) 598
Lsp1109I GCAGC 4 cut(s) 326, 406, 541, 544
LweI GCATC 4 cut(s) 219, 295, 886, 956
MaeII ACGT 3 cut(s) 57, 544, 981
MaeIII GTNAC 2 cut(s) 254, 747
MalI GATC 4 cut(s) 265, 397, 804, 989
MboI GATC 4 cut(s) 263, 395, 802, 987
MboII GAAGA 7 cut(s) 310, 353, 460, 499, 604, 847, 959
MflI RGATCY 2 cut(s) 263, 802
MhlI GDGCHC 2 cut(s) 469, 933
MluCI AATT 3 cut(s) 104, 424, 608
MluI ACGCGT 1 cut(s) 972
Mph1103I ATGCAT 1 cut(s) 901
MroXI GAANNNNTTC 1 cut(s) 531
MslI CAYNNNNRTG 1 cut(s) 737
MspA1I CMGCKG 2 cut(s) 317, 925
MspI CCGG 1 cut(s) 360
MspR9I CCNGG 2 cut(s) 243, 691
MvaI CCWGG 2 cut(s) 243, 691
MvnI CGCG 1 cut(s) 974
MwoI GCNNNNNNNGC 4 cut(s) 122, 194, 314, 896
NdeII GATC 4 cut(s) 263, 395, 802, 987
NlaIII CATG 4 cut(s) 148, 262, 554, 649
NlaIV GGNNCC 1 cut(s) 265
NsiI ATGCAT 1 cut(s) 901
NspI RCATGY 1 cut(s) 554
PaqCI CACCTGC 1 cut(s) 881
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 93, 978
PdmI GAANNNNTTC 1 cut(s) 531
PfeI GAWTC 4 cut(s) 24, 118, 504, 527
PkrI GCNGC 4 cut(s) 316, 421, 556, 559
Ppu21I YACGTR 1 cut(s) 545
Psp6I CCWGG 2 cut(s) 241, 689
PspFI CCCAGC 2 cut(s) 702, 921
PspGI CCWGG 2 cut(s) 241, 689
PspN4I GGNNCC 1 cut(s) 265
PspPI GGNCC 1 cut(s) 220
PstNI CAGNNNCTG 2 cut(s) 317, 806
PsuI RGATCY 2 cut(s) 263, 802
PvuII CAGCTG 2 cut(s) 317, 925
RsaI GTAC 4 cut(s) 149, 543, 644, 842
RsaNI GTAC 4 cut(s) 148, 542, 643, 841
RseI CAYNNNNRTG 1 cut(s) 737
SalI GTCGAC 1 cut(s) 71
SatI GCNGC 4 cut(s) 315, 420, 555, 558
Sau3AI GATC 4 cut(s) 263, 395, 802, 987
Sau96I GGNCC 1 cut(s) 220
ScrFI CCNGG 2 cut(s) 243, 691
SduI GDGCHC 2 cut(s) 469, 933
SfaNI GCATC 4 cut(s) 219, 295, 886, 956
SfcI CTRYAG 1 cut(s) 309
SmiMI CAYNNNNRTG 1 cut(s) 737
Sse9I AATT 3 cut(s) 104, 424, 608
SsiI CCGC 1 cut(s) 369
StyD4I CCNGG 2 cut(s) 241, 689
TaaI ACNGT 4 cut(s) 81, 517, 784, 887
TaiI ACGT 3 cut(s) 60, 547, 984
TaqI TCGA 4 cut(s) 18, 54, 72, 87
TaqII GACCGA 1 cut(s) 686
TasI AATT 3 cut(s) 104, 424, 608
TfiI GAWTC 4 cut(s) 24, 118, 504, 527
TscAI CASTG 1 cut(s) 230
TseI GCWGC 4 cut(s) 314, 419, 554, 557
TspDTI ATGAA 4 cut(s) 168, 311, 589, 596
TspGWI ACGGA 2 cut(s) 300, 948
TspRI CASTG 1 cut(s) 230
VneI GTGCAC 1 cut(s) 929
XagI CCTNNNNNAGG 1 cut(s) 688
XapI RAATTY 1 cut(s) 608
XceI RCATGY 1 cut(s) 554
XmiI GTMKAC 1 cut(s) 72
XmnI GAANNNNTTC 1 cut(s) 531
ZraI GACGTC 1 cut(s) 58
Zsp2I ATGCAT 1 cut(s) 901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.