Rmu_co8309403.1_g000001

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8309403.1
OG0002092
Physical Location & Seq
Forward (+)
1 .. 862
862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8309403.1_g000001.1.cds

Sequence Viewer

Length: 489 bp
aactgctacaaatttgagcatttgaaaagaccagaaaattgggcattagttgagaaggccaaatacttgtatattgctggttttttcctaactgtatcgccagaatccatacagcttgttgctgaacatgcagccaataataacaagattttcggcatgaacctttctgctacatttatctgtgagtttttcaaggatgctcaggagaaagctttgccgtatgtggactatgtttttggaaatgagacagaagcaagaacattctcaaaagttcacggctgggagactgatgatgttgaagaaatagctctaaagatctcccagtggccaaaagcatcaggagcacacaagaggattactgtcataactcaaggtgcagatcctgtagtcgtcgctgaggatgggaaagtgaagcagttcccagtgatactgttgcccaaagaaaagattgttgataccattggagcaggtatctcttatatgcagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

162

Amino Acids

18.24

Weight (kDa)

5.83

Isoelectric Point (pI)

28.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 458
AclWI GGATC 1 cut(s) 374
AcoI YGGCCR 1 cut(s) 326
AcsI RAATTY 1 cut(s) 11
AgsI TTSAA 3 cut(s) 25, 193, 299
AluBI AGCT 3 cut(s) 115, 212, 308
AluI AGCT 3 cut(s) 115, 212, 308
Alw21I GWGCWC 1 cut(s) 346
Alw26I GTCTC 2 cut(s) 239, 278
AlwI GGATC 1 cut(s) 374
AlwNI CAGNNNCTG 1 cut(s) 383
AoxI GGCC 2 cut(s) 57, 326
ApeKI GCWGC 1 cut(s) 131
ApoI RAATTY 1 cut(s) 11
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
Asp700I GAANNNNTTC 1 cut(s) 416
BalI TGGCCA 1 cut(s) 328
BarI GAAGNNNNNNTAC 2 cut(s) 47, 79
Bbv12I GWGCWC 1 cut(s) 346
BbvCI CCTCAGC 1 cut(s) 396
BbvI GCAGC 1 cut(s) 143
BccI CCATC 1 cut(s) 395
BceAI ACGGC 2 cut(s) 202, 292
BcoDI GTCTC 2 cut(s) 239, 278
BfmI CTRYAG 1 cut(s) 384
BfuAI ACCTGC 1 cut(s) 458
BglII AGATCT 1 cut(s) 315
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
BmrI ACTGGG 2 cut(s) 316, 416
BmsI GCATC 2 cut(s) 187, 344
BmuI ACTGGG 2 cut(s) 316, 416
Bpu10I CCTNAGC 2 cut(s) 201, 396
BpuEI CTTGAG 1 cut(s) 354
Bse1I ACTGG 2 cut(s) 322, 422
BseGI GGATG 2 cut(s) 202, 406
BseMII CTCAG 2 cut(s) 215, 387
BseNI ACTGG 2 cut(s) 322, 422
BseXI GCAGC 1 cut(s) 143
BseYI CCCAGC 1 cut(s) 279
BsgI GTGCAG 1 cut(s) 396
BshFI GGCC 2 cut(s) 59, 328
BsiHKAI GWGCWC 1 cut(s) 346
BsmAI GTCTC 2 cut(s) 239, 278
BsnI GGCC 2 cut(s) 59, 328
Bsp1286I GDGCHC 1 cut(s) 346
Bsp143I GATC 2 cut(s) 315, 379
BspANI GGCC 2 cut(s) 59, 328
BspCNI CTCAG 2 cut(s) 214, 388
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 1 cut(s) 374
BsrI ACTGG 2 cut(s) 322, 422
BssMI GATC 2 cut(s) 315, 379
Bst4CI ACNGT 3 cut(s) 94, 361, 432
BstDEI CTNAG 2 cut(s) 201, 396
BstF5I GGATG 2 cut(s) 202, 406
BstKTI GATC 2 cut(s) 318, 382
BstMAI GTCTC 2 cut(s) 239, 278
BstMBI GATC 2 cut(s) 315, 379
BstMWI GCNNNNNNNGC 2 cut(s) 128, 341
BstNSI RCATGY 1 cut(s) 131
BstSFI CTRYAG 1 cut(s) 384
BstV1I GCAGC 1 cut(s) 143
BstX2I RGATCY 2 cut(s) 315, 379
BstXI CCANNNNNNTGG 1 cut(s) 39
BstYI RGATCY 2 cut(s) 315, 379
BsuRI GGCC 2 cut(s) 59, 328
BtsCI GGATG 2 cut(s) 202, 406
BtsIMutI CAGTG 2 cut(s) 329, 429
BveI ACCTGC 1 cut(s) 458
CaiI CAGNNNCTG 1 cut(s) 383
CviAII CATG 2 cut(s) 128, 157
CviJI RGCY 7 cut(s) 59, 115, 134, 212, 279, 308, 328
CviKI_1 RGCY 7 cut(s) 59, 115, 134, 212, 279, 308, 328
DdeI CTNAG 2 cut(s) 201, 396
DpnI GATC 2 cut(s) 317, 381
DpnII GATC 2 cut(s) 315, 379
EaeI YGGCCR 1 cut(s) 326
FaeI CATG 2 cut(s) 131, 160
FaiI YATR 9 cut(s) 72, 110, 129, 158, 222, 231, 365, 480, 482
FatI CATG 2 cut(s) 127, 156
Fnu4HI GCNGC 1 cut(s) 132
FokI GGATG 2 cut(s) 209, 413
Fsp4HI GCNGC 1 cut(s) 132
GluI GCNGC 1 cut(s) 132
GsaI CCCAGC 1 cut(s) 283
HaeIII GGCC 2 cut(s) 59, 328
Hin1II CATG 2 cut(s) 131, 160
HindIII AAGCTT 1 cut(s) 210
HinfI GANTC 1 cut(s) 104
Hpy166II GTNNAC 2 cut(s) 226, 274
Hpy188III TCNNGA 2 cut(s) 203, 339
Hpy8I GTNNAC 2 cut(s) 226, 274
Hpy99I CGWCG 1 cut(s) 395
HpyAV CCTTC 1 cut(s) 49
HpyCH4III ACNGT 3 cut(s) 94, 361, 432
HpyCH4V TGCA 3 cut(s) 131, 377, 484
HpyF10VI GCNNNNNNNGC 2 cut(s) 128, 341
HpyF3I CTNAG 2 cut(s) 201, 396
Hsp92II CATG 2 cut(s) 131, 160
Kzo9I GATC 2 cut(s) 315, 379
LmnI GCTCC 2 cut(s) 341, 464
Lsp1109I GCAGC 1 cut(s) 143
LweI GCATC 2 cut(s) 187, 344
MalI GATC 2 cut(s) 317, 381
MboI GATC 2 cut(s) 315, 379
MboII GAAGA 1 cut(s) 311
MflI RGATCY 2 cut(s) 315, 379
MhlI GDGCHC 1 cut(s) 346
MlsI TGGCCA 1 cut(s) 328
MluCI AATT 2 cut(s) 11, 37
MluNI TGGCCA 1 cut(s) 328
MnlI CCTC 2 cut(s) 345, 391
Mox20I TGGCCA 1 cut(s) 328
MroXI GAANNNNTTC 1 cut(s) 416
MscI TGGCCA 1 cut(s) 328
Msp20I TGGCCA 1 cut(s) 328
MwoI GCNNNNNNNGC 2 cut(s) 128, 341
NdeII GATC 2 cut(s) 315, 379
NlaIII CATG 2 cut(s) 131, 160
NspI RCATGY 1 cut(s) 131
PdmI GAANNNNTTC 1 cut(s) 416
PfeI GAWTC 1 cut(s) 104
PkrI GCNGC 1 cut(s) 133
PspFI CCCAGC 1 cut(s) 279
PstNI CAGNNNCTG 1 cut(s) 383
PsuI RGATCY 2 cut(s) 315, 379
SatI GCNGC 1 cut(s) 132
Sau3AI GATC 2 cut(s) 315, 379
SduI GDGCHC 1 cut(s) 346
SetI ASST 6 cut(s) 117, 165, 214, 310, 376, 472
SfaNI GCATC 2 cut(s) 187, 344
SfcI CTRYAG 1 cut(s) 384
SmlI CTYRAG 1 cut(s) 369
SmoI CTYRAG 1 cut(s) 369
Sse9I AATT 2 cut(s) 11, 37
TaaI ACNGT 3 cut(s) 94, 361, 432
TasI AATT 2 cut(s) 11, 37
TfiI GAWTC 1 cut(s) 104
TscAI CASTG 2 cut(s) 329, 429
TseI GCWGC 1 cut(s) 131
TspDTI ATGAA 1 cut(s) 173
TspRI CASTG 2 cut(s) 329, 429
XapI RAATTY 1 cut(s) 11
XceI RCATGY 1 cut(s) 131
XmnI GAANNNNTTC 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.