Rh3DG196700

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0002092
Physical Location & Seq
Reverse (-)
17620688 .. 17626817
6130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG196700.1

Sequence Viewer

Length: 774 bp
ATGGCGTCCGAAGGAATTCTGCTGGGGATGGGCAACCCACTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTGAAAAAATATGATCTCCAGCTCAACAATGCGATTCTCGCAGAGGACAAGCACCTTCCCATGTCACTTATTGCCAATTTGGCAGCTGCTAACTGCTACAAAGTTGAGCATTTGAAAAGACCAGAAAACTGGGCATTGGTTGAGAAGGCCAAGTACTTCTATATTGCTGGTTTTTTCTTAACTGTATCTCCAGAATCCATTCAGCTGGTTGCTGAACATGCAGCTGCAAATAACAAGGTTTTCAGCATGAACCTTTCTGCCCCCTTTATCTGTGAGTTTTTCAAGGATGTCCAGGAGAAAGTTTTGCCGTATATGGATTATGTTTTTGGAAATGAGACAGAAGCAAGAACTTTCTCAAAAGTTCACGGCTGGGAGACTGATGATGTTGAGCAAATAGCTCTTAAGATCTCTGAGTGGCCGAAAGTAGGAGGACGCAAGCGGATTACTGTTATTACTCAGGGGGCTGATCCTGTGGTTGTTGCTGAGGATGGGAAAGTGAAGAAGTTCCCGGTGATACTGTTGCCAAAAGAAAAGCTTGTTGATACCAATGGAGCAGGGGATGCATTTGTTGGAGGTTTTCTATCTCAGTTAGTTCAAGAGAAACCCATTGAAGATTGCGTGAAAGCTGGTTGTTATGCTGCAAATGTGATCATCCAGAGGTCTGGCTGCACCTACCCAGAGAAGCCTGACTTTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

257

Amino Acids

28.48

Weight (kDa)

5.23

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 21 - 251 5.5e-49 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 63
AciI CCGC 2 cut(s) 54, 514
AclWI GGATC 1 cut(s) 536
AcoI YGGCCR 1 cut(s) 491
AcsI RAATTY 1 cut(s) 15
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 230
AfiI CCNNNNNNNGG 1 cut(s) 500
AflII CTTAAG 1 cut(s) 476
AgsI TTSAA 5 cut(s) 79, 190, 358, 671, 686
AjnI CCWGG 1 cut(s) 366
AluBI AGCT 7 cut(s) 97, 161, 280, 299, 473, 610, 701
AluI AGCT 7 cut(s) 97, 161, 280, 299, 473, 610, 701
Alw26I GTCTC 2 cut(s) 404, 443
AlwI GGATC 1 cut(s) 536
AoxI GGCC 2 cut(s) 222, 491
ApeKI GCWGC 6 cut(s) 158, 161, 296, 299, 713, 741
ApoI RAATTY 1 cut(s) 15
Asp700I GAANNNNTTC 3 cut(s) 15, 273, 578
AsuC2I CCSGG 1 cut(s) 584
AsuHPI GGTGA 1 cut(s) 598
BarI GAAGNNNNNNTAC 2 cut(s) 212, 244
BbvCI CCTCAGC 1 cut(s) 558
BbvI GCAGC 6 cut(s) 148, 170, 286, 308, 700, 728
BccI CCATC 2 cut(s) 22, 557
BceAI ACGGC 3 cut(s) 41, 367, 457
BciT130I CCWGG 1 cut(s) 368
BclI TGATCA 1 cut(s) 723
BcnI CCSGG 1 cut(s) 584
BcoDI GTCTC 2 cut(s) 404, 443
BfrI CTTAAG 1 cut(s) 476
BglI GCCNNNNNGGC 1 cut(s) 155
BglII AGATCT 1 cut(s) 480
BisI GCNGC 6 cut(s) 159, 162, 297, 300, 714, 742
BlsI GCNGC 6 cut(s) 160, 163, 298, 301, 715, 743
BmcAI AGTACT 1 cut(s) 230
Bme1390I CCNGG 2 cut(s) 368, 584
BmrFI CCNGG 2 cut(s) 368, 584
BmrI ACTGGG 1 cut(s) 214
BmsI GCATC 1 cut(s) 625
BmuI ACTGGG 1 cut(s) 214
BpmI CTGGAG 2 cut(s) 77, 249
Bpu10I CCTNAGC 1 cut(s) 558
BpuMI CCSGG 1 cut(s) 584
BsaHI GRCGYC 1 cut(s) 5
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bsc4I CCNNNNNNNGG 1 cut(s) 500
Bse1I ACTGG 1 cut(s) 209
BseBI CCWGG 1 cut(s) 368
BseGI GGATG 5 cut(s) 33, 367, 568, 640, 726
BseLI CCNNNNNNNGG 1 cut(s) 500
BseMII CTCAG 4 cut(s) 477, 545, 549, 674
BseNI ACTGG 1 cut(s) 209
BseRI GAGGAG 1 cut(s) 32
BseXI GCAGC 6 cut(s) 148, 170, 286, 308, 700, 728
BseYI CCCAGC 2 cut(s) 22, 444
BsgI GTGCAG 1 cut(s) 727
BshFI GGCC 2 cut(s) 224, 493
BsiSI CCGG 1 cut(s) 584
BslI CCNNNNNNNGG 1 cut(s) 500
BsmAI GTCTC 2 cut(s) 404, 443
BsnI GGCC 2 cut(s) 224, 493
Bsp143I GATC 4 cut(s) 88, 480, 541, 723
BspACI CCGC 2 cut(s) 54, 514
BspANI GGCC 2 cut(s) 224, 493
BspCNI CTCAG 4 cut(s) 478, 544, 550, 673
BspPI GGATC 1 cut(s) 536
BspTI CTTAAG 1 cut(s) 476
BsrI ACTGG 1 cut(s) 209
BssMI GATC 4 cut(s) 88, 480, 541, 723
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 1 cut(s) 368
Bst4CI ACNGT 3 cut(s) 259, 523, 594
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 476
BstAPI GCANNNNNTGC 1 cut(s) 635
BstC8I GCNNGC 1 cut(s) 512
BstDEI CTNAG 4 cut(s) 486, 531, 558, 660
BstF5I GGATG 5 cut(s) 33, 367, 568, 640, 726
BstKTI GATC 4 cut(s) 91, 483, 544, 726
BstMAI GTCTC 2 cut(s) 404, 443
BstMBI GATC 4 cut(s) 88, 480, 541, 723
BstMWI GCNNNNNNNGC 4 cut(s) 113, 155, 293, 635
BstNI CCWGG 1 cut(s) 368
BstNSI RCATGY 1 cut(s) 296
BstSCI CCNGG 2 cut(s) 366, 582
BstV1I GCAGC 6 cut(s) 148, 170, 286, 308, 700, 728
BstX2I RGATCY 1 cut(s) 480
BstXI CCANNNNNNTGG 3 cut(s) 204, 280, 737
BstYI RGATCY 1 cut(s) 480
BsuRI GGCC 2 cut(s) 224, 493
BtsCI GGATG 5 cut(s) 33, 367, 568, 640, 726
Cac8I GCNNGC 1 cut(s) 512
CseI GACGC 1 cut(s) 516
Csp6I GTAC 1 cut(s) 229
CviAII CATG 3 cut(s) 136, 293, 322
CviQI GTAC 1 cut(s) 229
DdeI CTNAG 4 cut(s) 486, 531, 558, 660
DpnI GATC 4 cut(s) 90, 482, 543, 725
DpnII GATC 4 cut(s) 88, 480, 541, 723
EaeI YGGCCR 1 cut(s) 491
EciI GGCGGA 1 cut(s) 43
EcoRI GAATTC 1 cut(s) 15
EcoRII CCWGG 1 cut(s) 366
EcoT22I ATGCAT 1 cut(s) 640
FaeI CATG 3 cut(s) 139, 296, 325
FaiI YATR 9 cut(s) 87, 137, 237, 294, 323, 387, 389, 396, 711
FalI AAGNNNNNCTT 3 cut(s) 594, 626, 749
FatI CATG 3 cut(s) 135, 292, 321
FbaI TGATCA 1 cut(s) 723
FblI GTMKAC 1 cut(s) 63
Fnu4HI GCNGC 6 cut(s) 159, 162, 297, 300, 714, 742
FokI GGATG 5 cut(s) 40, 374, 575, 647, 713
Fsp4HI GCNGC 6 cut(s) 159, 162, 297, 300, 714, 742
GluI GCNGC 6 cut(s) 159, 162, 297, 300, 714, 742
GsaI CCCAGC 2 cut(s) 26, 448
GsuI CTGGAG 2 cut(s) 77, 249
HaeIII GGCC 2 cut(s) 224, 493
HapII CCGG 1 cut(s) 584
HgaI GACGC 1 cut(s) 516
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 3 cut(s) 139, 296, 325
HincII GTYRAC 1 cut(s) 64
HindII GTYRAC 1 cut(s) 64
HindIII AAGCTT 1 cut(s) 608
HinfI GANTC 2 cut(s) 109, 269
HpaII CCGG 1 cut(s) 584
HphI GGTGA 1 cut(s) 598
Hpy166II GTNNAC 2 cut(s) 64, 439
Hpy188I TCNGA 2 cut(s) 10, 487
Hpy188III TCNNGA 4 cut(s) 76, 266, 671, 730
Hpy8I GTNNAC 2 cut(s) 64, 439
Hpy99I CGWCG 2 cut(s) 62, 65
HpyAV CCTTC 3 cut(s) 5, 140, 214
HpyCH4III ACNGT 3 cut(s) 259, 523, 594
HpyCH4V TGCA 5 cut(s) 296, 302, 638, 716, 744
HpyF10VI GCNNNNNNNGC 4 cut(s) 113, 155, 293, 635
HpyF3I CTNAG 4 cut(s) 486, 531, 558, 660
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 3 cut(s) 139, 296, 325
Ksp22I TGATCA 1 cut(s) 723
Kzo9I GATC 4 cut(s) 88, 480, 541, 723
LmnI GCTCC 1 cut(s) 626
Lsp1109I GCAGC 6 cut(s) 148, 170, 286, 308, 700, 728
LweI GCATC 1 cut(s) 625
MaeIII GTNAC 1 cut(s) 138
MalI GATC 4 cut(s) 90, 482, 543, 725
MboI GATC 4 cut(s) 88, 480, 541, 723
MboII GAAGA 2 cut(s) 586, 698
MflI RGATCY 1 cut(s) 480
MluCI AATT 2 cut(s) 15, 151
MmeI TCCRAC 1 cut(s) 625
MnlI CCTC 6 cut(s) 53, 112, 497, 553, 641, 726
Mph1103I ATGCAT 1 cut(s) 640
MroXI GAANNNNTTC 3 cut(s) 15, 273, 578
MseI TTAA 3 cut(s) 254, 477, 768
MspA1I CMGCKG 3 cut(s) 161, 280, 299
MspCI CTTAAG 1 cut(s) 476
MspI CCGG 1 cut(s) 584
MspR9I CCNGG 2 cut(s) 368, 584
MvaI CCWGG 1 cut(s) 368
MwoI GCNNNNNNNGC 4 cut(s) 113, 155, 293, 635
NciI CCSGG 1 cut(s) 584
NdeII GATC 4 cut(s) 88, 480, 541, 723
NlaIII CATG 3 cut(s) 139, 296, 325
NmuCI GTSAC 1 cut(s) 138
NsiI ATGCAT 1 cut(s) 640
NspI RCATGY 1 cut(s) 296
PdmI GAANNNNTTC 3 cut(s) 15, 273, 578
PfeI GAWTC 2 cut(s) 109, 269
PfoI TCCNGGA 1 cut(s) 366
PkrI GCNGC 6 cut(s) 160, 163, 298, 301, 715, 743
Psp6I CCWGG 1 cut(s) 366
PspFI CCCAGC 2 cut(s) 22, 444
PspGI CCWGG 1 cut(s) 366
PsuI RGATCY 1 cut(s) 480
PvuII CAGCTG 3 cut(s) 161, 280, 299
RsaI GTAC 1 cut(s) 230
RsaNI GTAC 1 cut(s) 229
SalI GTCGAC 1 cut(s) 62
SaqAI TTAA 3 cut(s) 254, 477, 768
SatI GCNGC 6 cut(s) 159, 162, 297, 300, 714, 742
Sau3AI GATC 4 cut(s) 88, 480, 541, 723
ScaI AGTACT 1 cut(s) 230
ScrFI CCNGG 2 cut(s) 368, 584
SfaNI GCATC 1 cut(s) 625
SmlI CTYRAG 1 cut(s) 476
SmoI CTYRAG 1 cut(s) 476
Sse9I AATT 2 cut(s) 15, 151
SsiI CCGC 2 cut(s) 54, 514
StyD4I CCNGG 2 cut(s) 366, 582
TaaI ACNGT 3 cut(s) 259, 523, 594
TaqI TCGA 2 cut(s) 45, 63
TasI AATT 2 cut(s) 15, 151
TatI WGTACW 1 cut(s) 228
TfiI GAWTC 2 cut(s) 109, 269
Tru1I TTAA 3 cut(s) 254, 477, 768
Tru9I TTAA 3 cut(s) 254, 477, 768
TseFI GTSAC 1 cut(s) 138
TseI GCWGC 6 cut(s) 158, 161, 296, 299, 713, 741
Tsp45I GTSAC 1 cut(s) 138
TspDTI ATGAA 1 cut(s) 338
Vha464I CTTAAG 1 cut(s) 476
XapI RAATTY 1 cut(s) 15
XceI RCATGY 1 cut(s) 296
XmiI GTMKAC 1 cut(s) 63
XmnI GAANNNNTTC 3 cut(s) 15, 273, 578
ZrmI AGTACT 1 cut(s) 230
Zsp2I ATGCAT 1 cut(s) 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.