Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0002092

Physical Location & Seq

Genomic Coordinates Reverse (-)

25007985 .. 25011638

Gene Structure 3654 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1172600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGGCGCACGAGCAGATCCTCCTGGGGATGGGCAATCCTCTTCTCGACATCTCTGCCGTCGTCGACGAAGAATTCTTGACAAAATATGACATCAAGCCGAACAATGCCATTCTTGCCGAGGACAAGCACCTGCCCATGTACGATGAAATGTCTTCCAAGTACAATGTAGAGTATATTGCTGGAGGTGCTACTCAAAATTCAATCAAAGTTGCGCAGTGGATGCTCCAAGCTCCTGGCGCAACTAGTTACATTGGATCCATTGGCAAAGACAAGTACGGTGAGGAGATGAAGAAAAATTGTAAACATGCTGGTGTTAATGTGCAATATTATGAAGATGACAAAGCTCCAACAGGAACATGTGCTGTTTGTGTAGTTGGTGGTGAGAGGTCTCTTGTTGCTAACTTATCAGCTGCAAATTGTTACAAAACTGAGCATTTGAAGCAACCTGAAAATTGGGCTCTGGTTGAAAAGGCAAAATATTACTACATTGCTGGGTTTTTCCTTACTGTGTCTCCTGAGTCCATTCAACTGGTTGCTGAACATGCTGCTGCAAACAATAAGGTATTCACGATGAATCTTTCCGCTCCTTTCATTTGTGAGTTCTTCAAGGATGTACAGGAGAAAGCACTTCCGTACATGGACTATGTTTTTGGGAATGAGACCGAAGCAAGAACTTTTTCAAGGGTTCATGGCTGGAAGACTGAAAATGTCGAGGAGATCGCCATAAAGATTTCCCAGTTGCCCAAAGCATCGGGTACGCACAAGAGGATTACTGTTATCACACAAGGTGCAGATCCTGTTGTAGTTGCTGAGGATGGGAAGGTGAAACTATTTCCTGTCATATTATTACCGAAGGAGAAGCTGGTTGATACCAATGGAGCTGGAGATGCATTTGTTGGGGGATTTTTGTCACAGCTGGTTCAAGAGAAGCCGATTGAAGACTGCGTTAAAGCTGGTTGTTATGCAGCAAATGTTGTCATCCAAAGGTCAGGCTGCACGTACCCAGAAAAGCCCAATTTCCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046872 GO:0046914 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 map00230 map01100

Pfam Domains

Protein Families

PfkB

Protein Analysis

342

Amino Acids

37.54

Weight (kDa)

5.5

Isoelectric Point (pI)

37.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PfkB	PF00294	25 - 335	2.5e-75	pfkB family carbohydrate kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002092)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09820 AT3G09820 AT5G03300 AT5G03300 AT5G03300
fragaria_vesca	FvH4_6g16080 FvH4_6g16090 FvH4_6g16090 FvH4_7g19110
malus_domestica	MD01G1106200.v1.1 MD07G1172600.v1.1 MD12G1116000.v1.1
prunus_persica	Prupe.2G211700_v2.0.a1 Prupe.6G235100_v2.0.a1
pyrus_communis	pycom01g13290 pycom04g09090 pycom07g16710 pycom12g11550 pycom14g07710
rosa_chinensis	RchiOBHm_Chr1g0363001 RchiOBHm_Chr3g0469911 RchiOBHm_Chr3g0469921
rosa_laevigata	RLG00000024312 RLG00000024313 RLG00000027603
rosa_multiflora	Rmu_co8309403.1_g000001 Rmu_sc0000174.1_g000004 Rmu_sc0008730.1_g000002
rosa_roxburghii	Rroxscaffold_4G00293560 Rroxscaffold_6G00411370
rosa_rugosa	Rorug01G0303400 Rorug03G0105500 Rorug03G0105600
rosa_samantha	Rh1AG312400 Rh1CG292600 Rh1DG306400 Rh3AG154400 Rh3BG178500 Rh3CG169100 Rh3DG196600 Rh3DG196700
rosa_wichuraiana	Rw1G027690 Rw3G014540 Rw3G014550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	138
Acc16I	TGCGCA	1 cut(s)	213
Acc36I	ACCTGC	1 cut(s)	138
AccBSI	CCGCTC	1 cut(s)	584
AccI	GTMKAC	1 cut(s)	63
AciI	CCGC	1 cut(s)	582
AclWI	GGATC	4 cut(s)	10, 249, 262, 788
AcsI	RAATTY	2 cut(s)	71, 196
AdeI	CACNNNGTG	1 cut(s)	788
AfaI	GTAC	7 cut(s)	140, 161, 275, 615, 635, 757, 1001
AfiI	CCNNNNNNNGG	1 cut(s)	28
AflIII	ACRYGT	1 cut(s)	356
AgsI	TTSAA	8 cut(s)	201, 439, 467, 527, 607, 681, 923, 938
AhlI	ACTAGT	1 cut(s)	242
AjnI	CCWGG	2 cut(s)	21, 232
AluBI	AGCT	7 cut(s)	230, 344, 410, 862, 881, 916, 953
AluI	AGCT	7 cut(s)	230, 344, 410, 862, 881, 916, 953
Alw26I	GTCTC	3 cut(s)	393, 516, 653
AlwI	GGATC	4 cut(s)	10, 249, 262, 788
AlwNI	CAGNNNCTG	1 cut(s)	797
ApeKI	GCWGC	5 cut(s)	410, 545, 548, 965, 993
ApoI	RAATTY	2 cut(s)	71, 196
ArsI	GACNNNNNNTTYG	2 cut(s)	632, 664
Asp700I	GAANNNNTTC	1 cut(s)	676
AspLEI	GCGC	3 cut(s)	7, 214, 239
AsuHPI	GGTGA	3 cut(s)	290, 392, 835
BamHI	GGATCC	1 cut(s)	254
BanII	GRGCYC	1 cut(s)	460
BauI	CACGAG	1 cut(s)	8
BbsI	GAAGAC	3 cut(s)	144, 704, 945
BbvCI	CCTCAGC	1 cut(s)	810
BbvI	GCAGC	5 cut(s)	397, 532, 535, 977, 980
BccI	CCATC	2 cut(s)	22, 809
BceAI	ACGGC	1 cut(s)	41
BcgI	CGANNNNNNTGC	2 cut(s)	35, 69
BciT130I	CCWGG	2 cut(s)	23, 234
BcoDI	GTCTC	3 cut(s)	393, 516, 653
BcuI	ACTAGT	1 cut(s)	242
BfaI	CTAG	1 cut(s)	243
BfuAI	ACCTGC	1 cut(s)	138
BisI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
BlsI	GCNGC	5 cut(s)	412, 547, 550, 967, 995
Bme1390I	CCNGG	2 cut(s)	23, 234
BmiI	GGNNCC	1 cut(s)	256
BmrFI	CCNGG	2 cut(s)	23, 234
BmrI	ACTGGG	1 cut(s)	730
BmsI	GCATC	3 cut(s)	210, 758, 877
BmuI	ACTGGG	1 cut(s)	730
BpiI	GAAGAC	3 cut(s)	144, 704, 945
BpmI	CTGGAG	2 cut(s)	201, 903
Bpu10I	CCTNAGC	1 cut(s)	810
BsaAI	YACGTR	1 cut(s)	999
BsaI	GGTCTC	2 cut(s)	393, 653
BsaJI	CCNNGG	2 cut(s)	22, 117
BsaXI	ACNNNNNCTCC	2 cut(s)	496, 526
Bsc4I	CCNNNNNNNGG	1 cut(s)	28
Bse1I	ACTGG	2 cut(s)	534, 736
Bse3DI	GCAATG	1 cut(s)	486
BseBI	CCWGG	2 cut(s)	23, 234
BseDI	CCNNGG	2 cut(s)	22, 117
BseGI	GGATG	5 cut(s)	33, 225, 616, 820, 978
BseLI	CCNNNNNNNGG	1 cut(s)	28
BseMI	GCAATG	1 cut(s)	486
BseMII	CTCAG	3 cut(s)	420, 507, 801
BseNI	ACTGG	2 cut(s)	534, 736
BseRI	GAGGAG	2 cut(s)	296, 728
BseXI	GCAGC	5 cut(s)	397, 532, 535, 977, 980
BseYI	CCCAGC	1 cut(s)	491
BsgI	GTGCAG	2 cut(s)	810, 979
BslI	CCNNNNNNNGG	1 cut(s)	28
BsmAI	GTCTC	3 cut(s)	393, 516, 653
Bso31I	GGTCTC	2 cut(s)	393, 653
Bsp1286I	GDGCHC	1 cut(s)	460
Bsp1407I	TGTACA	1 cut(s)	613
Bsp143I	GATC	4 cut(s)	15, 254, 717, 793
BspACI	CCGC	1 cut(s)	582
BspCNI	CTCAG	3 cut(s)	421, 508, 802
BspLI	GGNNCC	1 cut(s)	256
BspMI	ACCTGC	1 cut(s)	138
BspPI	GGATC	4 cut(s)	10, 249, 262, 788
BspTNI	GGTCTC	2 cut(s)	393, 653
BsrBI	CCGCTC	1 cut(s)	584
BsrDI	GCAATG	1 cut(s)	486
BsrGI	TGTACA	1 cut(s)	613
BsrI	ACTGG	2 cut(s)	534, 736
BssECI	CCNNGG	2 cut(s)	22, 117
BssMI	GATC	4 cut(s)	15, 254, 717, 793
BssSI	CACGAG	1 cut(s)	8
Bst2BI	CACGAG	1 cut(s)	8
Bst2UI	CCWGG	2 cut(s)	23, 234
Bst4CI	ACNGT	3 cut(s)	278, 508, 775
Bst6I	CTCTTC	1 cut(s)	45
BstAPI	GCANNNNNTGC	1 cut(s)	220
BstAUI	TGTACA	1 cut(s)	613
BstBAI	YACGTR	1 cut(s)	999
BstDEI	CTNAG	4 cut(s)	429, 516, 810, 1023
BstF5I	GGATG	5 cut(s)	33, 225, 616, 820, 978
BstHHI	GCGC	3 cut(s)	7, 214, 239
BstKTI	GATC	4 cut(s)	18, 257, 720, 796
BstMAI	GTCTC	3 cut(s)	393, 516, 653
BstMBI	GATC	4 cut(s)	15, 254, 717, 793
BstMWI	GCNNNNNNNGC	7 cut(s)	113, 185, 220, 236, 439, 542, 887
BstNI	CCWGG	2 cut(s)	23, 234
BstNSI	RCATGY	3 cut(s)	308, 360, 545
BstSCI	CCNGG	2 cut(s)	21, 232
BstV1I	GCAGC	5 cut(s)	397, 532, 535, 977, 980
BstV2I	GAAGAC	3 cut(s)	144, 704, 945
BstX2I	RGATCY	3 cut(s)	15, 254, 793
BstXI	CCANNNNNNTGG	2 cut(s)	233, 529
BstYI	RGATCY	3 cut(s)	15, 254, 793
BtsCI	GGATG	5 cut(s)	33, 225, 616, 820, 978
BtsI	GCAGTG	1 cut(s)	221
BtsIMutI	CAGTG	1 cut(s)	221
BveI	ACCTGC	1 cut(s)	138
CaiI	CAGNNNCTG	1 cut(s)	797
CfoI	GCGC	3 cut(s)	7, 214, 239
Csp6I	GTAC	7 cut(s)	139, 160, 274, 614, 634, 756, 1000
CviAII	CATG	6 cut(s)	136, 305, 357, 542, 637, 689
CviQI	GTAC	7 cut(s)	139, 160, 274, 614, 634, 756, 1000
DdeI	CTNAG	4 cut(s)	429, 516, 810, 1023
DpnI	GATC	4 cut(s)	17, 256, 719, 795
DpnII	GATC	4 cut(s)	15, 254, 717, 793
DraIII	CACNNNGTG	1 cut(s)	788
Eam1104I	CTCTTC	1 cut(s)	45
EarI	CTCTTC	1 cut(s)	45
Eco24I	GRGCYC	1 cut(s)	460
Eco31I	GGTCTC	2 cut(s)	393, 653
EcoRI	GAATTC	1 cut(s)	71
EcoRII	CCWGG	2 cut(s)	21, 232
EcoT22I	ATGCAT	1 cut(s)	892
EcoT38I	GRGCYC	1 cut(s)	460
FaeI	CATG	6 cut(s)	139, 308, 360, 545, 640, 692
FatI	CATG	6 cut(s)	135, 304, 356, 541, 636, 688
FblI	GTMKAC	1 cut(s)	63
Fnu4HI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
FokI	GGATG	5 cut(s)	40, 232, 623, 827, 965
FriOI	GRGCYC	1 cut(s)	460
Fsp4HI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
FspBI	CTAG	1 cut(s)	243
FspI	TGCGCA	1 cut(s)	213
GlaI	GCGC	3 cut(s)	6, 213, 238
GluI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
GsaI	CCCAGC	1 cut(s)	495
GsuI	CTGGAG	2 cut(s)	201, 903
HhaI	GCGC	3 cut(s)	7, 214, 239
Hin1II	CATG	6 cut(s)	139, 308, 360, 545, 640, 692
Hin6I	GCGC	3 cut(s)	5, 212, 237
HinP1I	GCGC	3 cut(s)	5, 212, 237
HincII	GTYRAC	1 cut(s)	64
HindII	GTYRAC	1 cut(s)	64
HinfI	GANTC	2 cut(s)	518, 574
HphI	GGTGA	3 cut(s)	290, 392, 835
Hpy166II	GTNNAC	2 cut(s)	64, 302
Hpy188III	TCNNGA	5 cut(s)	44, 76, 515, 568, 923
Hpy8I	GTNNAC	2 cut(s)	64, 302
Hpy99I	CGWCG	3 cut(s)	62, 65, 68
HpyAV	CCTTC	2 cut(s)	814, 847
HpyCH4III	ACNGT	3 cut(s)	278, 508, 775
HpyCH4IV	ACGT	1 cut(s)	998
HpyCH4V	TGCA	7 cut(s)	322, 413, 551, 791, 890, 965, 996
HpyF10VI	GCNNNNNNNGC	7 cut(s)	113, 185, 220, 236, 439, 542, 887
HpyF3I	CTNAG	4 cut(s)	429, 516, 810, 1023
HpySE526I	ACGT	1 cut(s)	998
Hsp92II	CATG	6 cut(s)	139, 308, 360, 545, 640, 692
HspAI	GCGC	3 cut(s)	5, 212, 237
Kzo9I	GATC	4 cut(s)	15, 254, 717, 793
LmnI	GCTCC	5 cut(s)	228, 235, 349, 589, 878
Lsp1109I	GCAGC	5 cut(s)	397, 532, 535, 977, 980
LweI	GCATC	3 cut(s)	210, 758, 877
MaeI	CTAG	1 cut(s)	243
MaeII	ACGT	1 cut(s)	998
MaeIII	GTNAC	3 cut(s)	245, 419, 909
MalI	GATC	4 cut(s)	17, 256, 719, 795
MbiI	CCGCTC	1 cut(s)	584
MboI	GATC	4 cut(s)	15, 254, 717, 793
MboII	GAAGA	8 cut(s)	32, 80, 144, 301, 344, 595, 709, 950
MflI	RGATCY	3 cut(s)	15, 254, 793
MhlI	GDGCHC	1 cut(s)	460
MluCI	AATT	6 cut(s)	71, 196, 295, 415, 451, 1015
MlyI	GAGTC	1 cut(s)	527
MmeI	TCCRAC	1 cut(s)	371
MnlI	CCTC	9 cut(s)	29, 48, 112, 176, 274, 378, 706, 759, 805
Mph1103I	ATGCAT	1 cut(s)	892
MroXI	GAANNNNTTC	1 cut(s)	676
MseI	TTAA	2 cut(s)	315, 948
MslI	CAYNNNNRTG	1 cut(s)	309
MspA1I	CMGCKG	2 cut(s)	410, 916
MspR9I	CCNGG	2 cut(s)	23, 234
MvaI	CCWGG	2 cut(s)	23, 234
MwoI	GCNNNNNNNGC	7 cut(s)	113, 185, 220, 236, 439, 542, 887
NdeII	GATC	4 cut(s)	15, 254, 717, 793
NlaIII	CATG	6 cut(s)	139, 308, 360, 545, 640, 692
NlaIV	GGNNCC	1 cut(s)	256
NmeAIII	GCCGAG	1 cut(s)	142
NmuCI	GTSAC	1 cut(s)	909
NsbI	TGCGCA	1 cut(s)	213
NsiI	ATGCAT	1 cut(s)	892
NspI	RCATGY	3 cut(s)	308, 360, 545
PaqCI	CACCTGC	1 cut(s)	138
PciI	ACATGT	1 cut(s)	356
PdmI	GAANNNNTTC	1 cut(s)	676
PfeI	GAWTC	1 cut(s)	574
PkrI	GCNGC	5 cut(s)	412, 547, 550, 967, 995
PleI	GAGTC	1 cut(s)	526
PpsI	GAGTC	1 cut(s)	526
Ppu21I	YACGTR	1 cut(s)	999
PscI	ACATGT	1 cut(s)	356
Psp6I	CCWGG	2 cut(s)	21, 232
PspFI	CCCAGC	1 cut(s)	491
PspGI	CCWGG	2 cut(s)	21, 232
PspN4I	GGNNCC	1 cut(s)	256
PstNI	CAGNNNCTG	1 cut(s)	797
PsuI	RGATCY	3 cut(s)	15, 254, 793
PvuII	CAGCTG	2 cut(s)	410, 916
RsaI	GTAC	7 cut(s)	140, 161, 275, 615, 635, 757, 1001
RsaNI	GTAC	7 cut(s)	139, 160, 274, 614, 634, 756, 1000
RseI	CAYNNNNRTG	1 cut(s)	309
SalI	GTCGAC	1 cut(s)	62
SaqAI	TTAA	2 cut(s)	315, 948
SatI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
Sau3AI	GATC	4 cut(s)	15, 254, 717, 793
SchI	GAGTC	1 cut(s)	527
ScrFI	CCNGG	2 cut(s)	23, 234
SduI	GDGCHC	1 cut(s)	460
SfaNI	GCATC	3 cut(s)	210, 758, 877
SgrDI	CGTCGACG	1 cut(s)	62
SmiMI	CAYNNNNRTG	1 cut(s)	309
SpeI	ACTAGT	1 cut(s)	242
Sse9I	AATT	6 cut(s)	71, 196, 295, 415, 451, 1015
SsiI	CCGC	1 cut(s)	582
SspI	AATATT	2 cut(s)	326, 479
SspMI	CTAG	1 cut(s)	243
StyD4I	CCNGG	2 cut(s)	21, 232
TaaI	ACNGT	3 cut(s)	278, 508, 775
TaiI	ACGT	1 cut(s)	1001
TaqI	TCGA	3 cut(s)	45, 63, 711
TaqII	GACCGA	1 cut(s)	677
TasI	AATT	6 cut(s)	71, 196, 295, 415, 451, 1015
TatI	WGTACW	2 cut(s)	159, 613
TfiI	GAWTC	1 cut(s)	574
Tru1I	TTAA	2 cut(s)	315, 948
Tru9I	TTAA	2 cut(s)	315, 948
TscAI	CASTG	1 cut(s)	221
TseFI	GTSAC	1 cut(s)	909
TseI	GCWGC	5 cut(s)	410, 545, 548, 965, 993
Tsp45I	GTSAC	1 cut(s)	909
TspDTI	ATGAA	6 cut(s)	159, 302, 345, 580, 587, 677
TspGWI	ACGGA	1 cut(s)	621
TspRI	CASTG	1 cut(s)	221
XapI	RAATTY	2 cut(s)	71, 196
XceI	RCATGY	3 cut(s)	308, 360, 545
XmiI	GTMKAC	1 cut(s)	63
XmnI	GAANNNNTTC	1 cut(s)	676
XspI	CTAG	1 cut(s)	243
Zsp2I	ATGCAT	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.