Rh3DG196600

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0002092
Physical Location & Seq
Reverse (-)
17617073 .. 17619536
2464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG196600.1

Sequence Viewer

Length: 723 bp
ATGGCCTCCGAAGGAATCCTGTTGGGTATGGGCAACCCCCTTCTTGACATCTCCGCCATTGTCGATGAAGACTTCTTGAAAAAGTCACTTGTTGCCAATTTGTCAGCTGCTAACTGCTACAAATTTGAGCATTTGAAAAGACCAGAAAATTGGGCATTAGTTGAGAAGGCCAAATACTTGTATATTGCTGGTTTTTTCCTAACTGTATCGCCAGAATCCATACAGCTTGTTGCTGAACATGCGGCCAATAATAACAAGATTTTCGGCATGAACCTTTCTGCTACATTTATCTGTGAGTTTTTCAAGGATGCTCAGGAGAAAGCTTTGCCGTATGTGGACTATGTTTTTGGAAATGAGACAGAAGCAAGAACATTCTCAAAAGTTCACGGCTGGGAGACTGATGATGTTGAAGAAATAGCTCTAAAGATCTCCCAGTGGCCAAAAGCATCAGGAGCACACAAGAGGATTACTGTCATAACTCAAGGTGCAGATCCTGTAGTCGTCGCTGAGGATGGGAAAGTGAAGAAGTTCCCAGTGATACTGTTGCCCAAAGAAAAGATTGTTGATACCATTGGAGCAGGGGATGCGTTTGTTGGTGGCTTTCTATCACAGTTAGTTCAAGAGAAACCCACTGAAGAGTGCGTGAGAGCCGGTTGTTATGCTGCAAGTGTGATCATCCAAAGGTCTGGCTGCACCTACCCAGAGAAGCCCGATTTTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

240

Amino Acids

26.43

Weight (kDa)

5.23

Isoelectric Point (pI)

30.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 20 - 234 1.2e-50 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 54, 242
AclWI GGATC 1 cut(s) 485
AcoI YGGCCR 2 cut(s) 243, 437
AcsI RAATTY 1 cut(s) 122
AcuI CTGAAG 1 cut(s) 654
AgsI TTSAA 5 cut(s) 79, 136, 304, 410, 620
AluBI AGCT 4 cut(s) 107, 226, 323, 419
AluI AGCT 4 cut(s) 107, 226, 323, 419
Alw21I GWGCWC 1 cut(s) 457
Alw26I GTCTC 2 cut(s) 350, 389
AlwI GGATC 1 cut(s) 485
AlwNI CAGNNNCTG 1 cut(s) 494
AoxI GGCC 4 cut(s) 3, 168, 243, 437
ApeKI GCWGC 3 cut(s) 107, 662, 690
ApoI RAATTY 1 cut(s) 122
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
Asp700I GAANNNNTTC 1 cut(s) 527
BalI TGGCCA 1 cut(s) 439
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BbsI GAAGAC 1 cut(s) 75
Bbv12I GWGCWC 1 cut(s) 457
BbvCI CCTCAGC 1 cut(s) 507
BbvI GCAGC 3 cut(s) 94, 649, 677
BccI CCATC 1 cut(s) 506
BceAI ACGGC 2 cut(s) 313, 403
BclI TGATCA 1 cut(s) 672
BcoDI GTCTC 2 cut(s) 350, 389
BfmI CTRYAG 1 cut(s) 495
BglII AGATCT 1 cut(s) 426
BisI GCNGC 4 cut(s) 108, 243, 663, 691
BlsI GCNGC 4 cut(s) 109, 244, 664, 692
BmrI ACTGGG 2 cut(s) 427, 527
BmsI GCATC 3 cut(s) 298, 455, 574
BmuI ACTGGG 2 cut(s) 427, 527
BpiI GAAGAC 1 cut(s) 75
Bpu10I CCTNAGC 2 cut(s) 312, 507
BpuEI CTTGAG 1 cut(s) 465
Bse118I RCCGGY 1 cut(s) 650
Bse1I ACTGG 2 cut(s) 433, 533
BseGI GGATG 4 cut(s) 313, 517, 589, 675
BseMII CTCAG 2 cut(s) 326, 498
BseNI ACTGG 2 cut(s) 433, 533
BseXI GCAGC 3 cut(s) 94, 649, 677
BseYI CCCAGC 1 cut(s) 390
BsgI GTGCAG 2 cut(s) 507, 676
BshFI GGCC 4 cut(s) 5, 170, 245, 439
BsiHKAI GWGCWC 1 cut(s) 457
BsiSI CCGG 1 cut(s) 651
BsmAI GTCTC 2 cut(s) 350, 389
BsnI GGCC 4 cut(s) 5, 170, 245, 439
Bsp1286I GDGCHC 1 cut(s) 457
Bsp143I GATC 3 cut(s) 426, 490, 672
BspACI CCGC 2 cut(s) 54, 242
BspANI GGCC 4 cut(s) 5, 170, 245, 439
BspCNI CTCAG 2 cut(s) 325, 499
BspPI GGATC 1 cut(s) 485
BsrFI RCCGGY 1 cut(s) 650
BsrI ACTGG 2 cut(s) 433, 533
BssAI RCCGGY 1 cut(s) 650
BssMI GATC 3 cut(s) 426, 490, 672
Bst4CI ACNGT 4 cut(s) 205, 472, 543, 612
Bst6I CTCTTC 1 cut(s) 630
BstAPI GCANNNNNTGC 1 cut(s) 584
BstDEI CTNAG 2 cut(s) 312, 507
BstF5I GGATG 4 cut(s) 313, 517, 589, 675
BstKTI GATC 3 cut(s) 429, 493, 675
BstMAI GTCTC 2 cut(s) 350, 389
BstMBI GATC 3 cut(s) 426, 490, 672
BstMWI GCNNNNNNNGC 3 cut(s) 239, 452, 584
BstNSI RCATGY 1 cut(s) 242
BstSFI CTRYAG 1 cut(s) 495
BstV1I GCAGC 3 cut(s) 94, 649, 677
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 2 cut(s) 426, 490
BstXI CCANNNNNNTGG 2 cut(s) 150, 686
BstYI RGATCY 2 cut(s) 426, 490
BsuRI GGCC 4 cut(s) 5, 170, 245, 439
BtsCI GGATG 4 cut(s) 313, 517, 589, 675
BtsIMutI CAGTG 3 cut(s) 440, 540, 630
CaiI CAGNNNCTG 1 cut(s) 494
Cfr10I RCCGGY 1 cut(s) 650
CviAII CATG 2 cut(s) 239, 268
DdeI CTNAG 2 cut(s) 312, 507
DpnI GATC 3 cut(s) 428, 492, 674
DpnII GATC 3 cut(s) 426, 490, 672
EaeI YGGCCR 2 cut(s) 243, 437
Eam1104I CTCTTC 1 cut(s) 630
EarI CTCTTC 1 cut(s) 630
EciI GGCGGA 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 654
FaeI CATG 2 cut(s) 242, 271
FaiI YATR 9 cut(s) 29, 183, 221, 240, 269, 333, 342, 476, 660
FatI CATG 2 cut(s) 238, 267
FbaI TGATCA 1 cut(s) 672
Fnu4HI GCNGC 4 cut(s) 108, 243, 663, 691
FokI GGATG 4 cut(s) 320, 524, 596, 662
Fsp4HI GCNGC 4 cut(s) 108, 243, 663, 691
GluI GCNGC 4 cut(s) 108, 243, 663, 691
GsaI CCCAGC 1 cut(s) 394
HaeIII GGCC 4 cut(s) 5, 170, 245, 439
HapII CCGG 1 cut(s) 651
Hin1II CATG 2 cut(s) 242, 271
HindIII AAGCTT 1 cut(s) 321
HinfI GANTC 2 cut(s) 15, 215
HpaII CCGG 1 cut(s) 651
Hpy166II GTNNAC 2 cut(s) 337, 385
Hpy188I TCNGA 1 cut(s) 10
Hpy188III TCNNGA 5 cut(s) 44, 76, 314, 450, 620
Hpy8I GTNNAC 2 cut(s) 337, 385
Hpy99I CGWCG 1 cut(s) 506
HpyAV CCTTC 3 cut(s) 5, 50, 160
HpyCH4III ACNGT 4 cut(s) 205, 472, 543, 612
HpyCH4V TGCA 3 cut(s) 488, 665, 693
HpyF10VI GCNNNNNNNGC 3 cut(s) 239, 452, 584
HpyF3I CTNAG 2 cut(s) 312, 507
Hsp92II CATG 2 cut(s) 242, 271
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 3 cut(s) 426, 490, 672
LmnI GCTCC 2 cut(s) 452, 575
Lsp1109I GCAGC 3 cut(s) 94, 649, 677
LweI GCATC 3 cut(s) 298, 455, 574
MaeIII GTNAC 1 cut(s) 84
MalI GATC 3 cut(s) 428, 492, 674
MboI GATC 3 cut(s) 426, 490, 672
MboII GAAGA 4 cut(s) 80, 422, 535, 647
MflI RGATCY 2 cut(s) 426, 490
MhlI GDGCHC 1 cut(s) 457
MlsI TGGCCA 1 cut(s) 439
MluCI AATT 3 cut(s) 97, 122, 148
MluNI TGGCCA 1 cut(s) 439
MnlI CCTC 3 cut(s) 16, 456, 502
Mox20I TGGCCA 1 cut(s) 439
MroXI GAANNNNTTC 1 cut(s) 527
MscI TGGCCA 1 cut(s) 439
MseI TTAA 1 cut(s) 717
Msp20I TGGCCA 1 cut(s) 439
MspA1I CMGCKG 1 cut(s) 107
MspI CCGG 1 cut(s) 651
MwoI GCNNNNNNNGC 3 cut(s) 239, 452, 584
NdeII GATC 3 cut(s) 426, 490, 672
NlaIII CATG 2 cut(s) 242, 271
NmuCI GTSAC 1 cut(s) 84
NspI RCATGY 1 cut(s) 242
PdmI GAANNNNTTC 1 cut(s) 527
PfeI GAWTC 2 cut(s) 15, 215
PkrI GCNGC 4 cut(s) 109, 244, 664, 692
PspFI CCCAGC 1 cut(s) 390
PstNI CAGNNNCTG 1 cut(s) 494
PsuI RGATCY 2 cut(s) 426, 490
PvuII CAGCTG 1 cut(s) 107
SaqAI TTAA 1 cut(s) 717
SatI GCNGC 4 cut(s) 108, 243, 663, 691
Sau3AI GATC 3 cut(s) 426, 490, 672
SduI GDGCHC 1 cut(s) 457
SetI ASST 8 cut(s) 109, 228, 276, 325, 421, 487, 686, 698
SfaNI GCATC 3 cut(s) 298, 455, 574
SfcI CTRYAG 1 cut(s) 495
SmlI CTYRAG 1 cut(s) 480
SmoI CTYRAG 1 cut(s) 480
Sse9I AATT 3 cut(s) 97, 122, 148
SsiI CCGC 2 cut(s) 54, 242
TaaI ACNGT 4 cut(s) 205, 472, 543, 612
TaqI TCGA 1 cut(s) 63
TasI AATT 3 cut(s) 97, 122, 148
TauI GCSGC 1 cut(s) 245
TfiI GAWTC 2 cut(s) 15, 215
Tru1I TTAA 1 cut(s) 717
Tru9I TTAA 1 cut(s) 717
TscAI CASTG 3 cut(s) 440, 540, 637
TseFI GTSAC 1 cut(s) 84
TseI GCWGC 3 cut(s) 107, 662, 690
Tsp45I GTSAC 1 cut(s) 84
TspDTI ATGAA 2 cut(s) 81, 284
TspRI CASTG 3 cut(s) 440, 540, 637
XapI RAATTY 1 cut(s) 122
XceI RCATGY 1 cut(s) 242
XmnI GAANNNNTTC 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.