Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002092

Physical Location & Seq

Genomic Coordinates Reverse (-)

24388726 .. 24392567

Gene Structure 3842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G211700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGGCGTACGAGCGGGTTCTCCTGGGGATGGGCAATCCTCTTCTCGACATTTCAGCTGTCGTTGACGATGAATTCTTGACAAAATATGACATCAAGCCGAACAATGCCATTCTTGCTGAGGACAAGCACCTGCCCATGTATGACGAAATGGCTTCCAAGTCCAATGTAGAGTATATTGCTGGAGGTGCGACTCAAAATTCAATTAGGGTTGCCCAGTGGATGCTCCAAGTTCCTGATGCGACTAGTTACATTGGATCCATTGGGAAGGACAAATTTGGAGAAGAGATGAAGAAAAATAGTAAACTTGCTGGTGTTAATGTACAATACTATGAAGATGACAAGGCTCCAACAGGAACATGTGCTGTTTGTGTAGTTGGTGGTGAGAGGTCCCTTGTTGCTAACTTATCAGCTGCAAATTGTTACAAATCTGAGCATTTGAAGCAACCAGAAAACTGGGCTCTGGTGGAAAAGGCAAAATATTTCTACATTGCTGGATTTTTCCTTACTGTGTCTCCTGAGTCCATCCAACTGGTTGCTGAACATGCAGCTGCAAACAATAAGGTATTCATGATGAATCTATCTGCTCCTTTCATTTGTGAGTTCTTCAAGGATGTGCAGGAGAAAGCCCTGCCGTACATGGACTATGTTTTTGGGAATGAGACAGAAGCAAGAACCTTTTCAAGGGTTCATGGCTGGGAGACTGACAATGTCGAGGAGATCGCCATAAAGATTTCCCAGTTGCCCAAAGCATCAGGTGCTCACAAGAGGATTACTGTGATCACACAAGGTGCAGATCCTGTTGTGGTTGCTCAGGATGGGAAGGTGAAATTGTATCCTGTGATCTTGTTGCCTAAGGAGAATCTGGTTGATACCAATGGAGCTGGGGATGCATTTGTTGGGGGATTCTTGTCTCAGCTGGTTCAAGAGAAGCCCATGGAAGACTGTGTTAGAGCTGGTTGTTATGCCGCAAATGTTGTCATCCAAAGGTCAGGCTGCACATACCCCGAAAAGCCTGATTTCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046872 GO:0046914 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 map00230 map01100

Pfam Domains

Protein Families

PfkB

Protein Analysis

342

Amino Acids

37.58

Weight (kDa)

5.13

Isoelectric Point (pI)

31.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002092)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09820 AT3G09820 AT5G03300 AT5G03300 AT5G03300
fragaria_vesca	FvH4_6g16080 FvH4_6g16090 FvH4_6g16090 FvH4_7g19110
malus_domestica	MD01G1106200.v1.1 MD07G1172600.v1.1 MD12G1116000.v1.1
prunus_persica	Prupe.2G211700_v2.0.a1 Prupe.6G235100_v2.0.a1
pyrus_communis	pycom01g13290 pycom04g09090 pycom07g16710 pycom12g11550 pycom14g07710
rosa_chinensis	RchiOBHm_Chr1g0363001 RchiOBHm_Chr3g0469911 RchiOBHm_Chr3g0469921
rosa_laevigata	RLG00000024312 RLG00000024313 RLG00000027603
rosa_multiflora	Rmu_co8309403.1_g000001 Rmu_sc0000174.1_g000004 Rmu_sc0008730.1_g000002
rosa_roxburghii	Rroxscaffold_4G00293560 Rroxscaffold_6G00411370
rosa_rugosa	Rorug01G0303400 Rorug03G0105500 Rorug03G0105600
rosa_samantha	Rh1AG312400 Rh1CG292600 Rh1DG306400 Rh3AG154400 Rh3BG178500 Rh3CG169100 Rh3DG196600 Rh3DG196700
rosa_wichuraiana	Rw1G027690 Rw3G014540 Rw3G014550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	138
Acc36I	ACCTGC	1 cut(s)	138
AccBSI	CCGCTC	1 cut(s)	13
AciI	CCGC	2 cut(s)	13, 966
AclWI	GGATC	3 cut(s)	249, 262, 788
AcsI	RAATTY	3 cut(s)	71, 196, 272
AdeI	CACNNNGTG	1 cut(s)	788
AfaI	GTAC	3 cut(s)	8, 321, 635
AfiI	CCNNNNNNNGG	2 cut(s)	28, 681
AflIII	ACRYGT	1 cut(s)	356
AgsI	TTSAA	5 cut(s)	201, 439, 607, 681, 923
AhlI	ACTAGT	1 cut(s)	242
AjnI	CCWGG	1 cut(s)	21
AluBI	AGCT	6 cut(s)	56, 410, 548, 881, 916, 953
AluI	AGCT	6 cut(s)	56, 410, 548, 881, 916, 953
Alw21I	GWGCWC	1 cut(s)	760
Alw26I	GTCTC	4 cut(s)	516, 653, 692, 915
AlwI	GGATC	3 cut(s)	249, 262, 788
AlwNI	CAGNNNCTG	1 cut(s)	797
ApeKI	GCWGC	4 cut(s)	410, 545, 548, 993
ApoI	RAATTY	3 cut(s)	71, 196, 272
ArsI	GACNNNNNNTTYG	2 cut(s)	632, 664
Asp700I	GAANNNNTTC	1 cut(s)	676
AspS9I	GGNCC	1 cut(s)	387
AsuHPI	GGTGA	2 cut(s)	392, 835
AvaII	GGWCC	1 cut(s)	387
AxyI	CCTNAGG	1 cut(s)	852
BamHI	GGATCC	1 cut(s)	254
BanII	GRGCYC	1 cut(s)	460
BbsI	GAAGAC	1 cut(s)	945
Bbv12I	GWGCWC	1 cut(s)	760
BbvCI	CCTCAGC	1 cut(s)	117
BbvI	GCAGC	4 cut(s)	397, 535, 557, 980
BccI	CCATC	3 cut(s)	22, 530, 809
BceAI	ACGGC	1 cut(s)	616
BciT130I	CCWGG	1 cut(s)	23
BciVI	GTATCC	1 cut(s)	843
BclI	TGATCA	1 cut(s)	777
BcoDI	GTCTC	4 cut(s)	516, 653, 692, 915
BcuI	ACTAGT	1 cut(s)	242
BfaI	CTAG	1 cut(s)	243
BfuAI	ACCTGC	1 cut(s)	138
BfuI	GTATCC	1 cut(s)	843
BisI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
BlsI	GCNGC	5 cut(s)	412, 547, 550, 967, 995
Bme1390I	CCNGG	1 cut(s)	23
Bme18I	GGWCC	1 cut(s)	387
BmgT120I	GGNCC	1 cut(s)	387
BmiI	GGNNCC	3 cut(s)	256, 345, 389
BmrFI	CCNGG	1 cut(s)	23
BmrI	ACTGGG	3 cut(s)	208, 463, 730
BmsI	GCATC	4 cut(s)	210, 226, 758, 877
BmuI	ACTGGG	3 cut(s)	208, 463, 730
BpiI	GAAGAC	1 cut(s)	945
BpmI	CTGGAG	1 cut(s)	201
Bpu10I	CCTNAGC	2 cut(s)	117, 810
BsaJI	CCNNGG	2 cut(s)	22, 933
BsaXI	ACNNNNNCTCC	2 cut(s)	496, 526
Bsc4I	CCNNNNNNNGG	2 cut(s)	28, 681
Bse1I	ACTGG	4 cut(s)	214, 458, 534, 736
Bse21I	CCTNAGG	1 cut(s)	852
Bse3DI	GCAATG	1 cut(s)	486
BseBI	CCWGG	1 cut(s)	23
BseDI	CCNNGG	2 cut(s)	22, 933
BseGI	GGATG	7 cut(s)	33, 225, 522, 616, 820, 892, 978
BseLI	CCNNNNNNNGG	2 cut(s)	28, 681
BseMI	GCAATG	1 cut(s)	486
BseMII	CTCAG	5 cut(s)	108, 420, 507, 824, 926
BseNI	ACTGG	4 cut(s)	214, 458, 534, 736
BseRI	GAGGAG	1 cut(s)	728
BseXI	GCAGC	4 cut(s)	397, 535, 557, 980
BseYI	CCCAGC	2 cut(s)	693, 881
BsgI	GTGCAG	3 cut(s)	635, 810, 979
BsiHKAI	GWGCWC	1 cut(s)	760
BsiWI	CGTACG	1 cut(s)	6
BslFI	GGGAC	1 cut(s)	373
BslI	CCNNNNNNNGG	2 cut(s)	28, 681
BsmAI	GTCTC	4 cut(s)	516, 653, 692, 915
BsmFI	GGGAC	1 cut(s)	373
Bsp1286I	GDGCHC	2 cut(s)	460, 760
Bsp1407I	TGTACA	1 cut(s)	319
Bsp143I	GATC	5 cut(s)	254, 717, 777, 793, 840
Bsp19I	CCATGG	1 cut(s)	933
BspACI	CCGC	2 cut(s)	13, 966
BspCNI	CTCAG	5 cut(s)	109, 421, 508, 823, 925
BspHI	TCATGA	1 cut(s)	567
BspLI	GGNNCC	3 cut(s)	256, 345, 389
BspMI	ACCTGC	1 cut(s)	138
BspPI	GGATC	3 cut(s)	249, 262, 788
BsrBI	CCGCTC	1 cut(s)	13
BsrDI	GCAATG	1 cut(s)	486
BsrGI	TGTACA	1 cut(s)	319
BsrI	ACTGG	4 cut(s)	214, 458, 534, 736
BssECI	CCNNGG	2 cut(s)	22, 933
BssMI	GATC	5 cut(s)	254, 717, 777, 793, 840
BssT1I	CCWWGG	1 cut(s)	933
Bst2UI	CCWGG	1 cut(s)	23
Bst4CI	ACNGT	3 cut(s)	508, 775, 944
Bst6I	CTCTTC	2 cut(s)	45, 276
BstAPI	GCANNNNNTGC	1 cut(s)	755
BstAUI	TGTACA	1 cut(s)	319
BstDEI	CTNAG	6 cut(s)	117, 429, 516, 810, 852, 912
BstDSI	CCRYGG	1 cut(s)	933
BstENI	CCTNNNNNAGG	1 cut(s)	679
BstF5I	GGATG	7 cut(s)	33, 225, 522, 616, 820, 892, 978
BstKTI	GATC	5 cut(s)	257, 720, 780, 796, 843
BstMAI	GTCTC	4 cut(s)	516, 653, 692, 915
BstMBI	GATC	5 cut(s)	254, 717, 777, 793, 840
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 185, 439, 542, 755, 887
BstNI	CCWGG	1 cut(s)	23
BstNSI	RCATGY	2 cut(s)	360, 545
BstSCI	CCNGG	1 cut(s)	21
BstV1I	GCAGC	4 cut(s)	397, 535, 557, 980
BstV2I	GAAGAC	1 cut(s)	945
BstX2I	RGATCY	2 cut(s)	254, 793
BstXI	CCANNNNNNTGG	2 cut(s)	453, 529
BstYI	RGATCY	2 cut(s)	254, 793
Bsu36I	CCTNAGG	1 cut(s)	852
BsuI	GTATCC	1 cut(s)	843
BtgI	CCRYGG	1 cut(s)	933
BtsCI	GGATG	7 cut(s)	33, 225, 522, 616, 820, 892, 978
BtsIMutI	CAGTG	1 cut(s)	221
BveI	ACCTGC	1 cut(s)	138
CaiI	CAGNNNCTG	1 cut(s)	797
CciI	TCATGA	1 cut(s)	567
Cfr13I	GGNCC	1 cut(s)	387
Csp6I	GTAC	3 cut(s)	7, 320, 634
CviAII	CATG	7 cut(s)	136, 357, 542, 568, 637, 689, 934
CviQI	GTAC	3 cut(s)	7, 320, 634
DdeI	CTNAG	6 cut(s)	117, 429, 516, 810, 852, 912
DpnI	GATC	5 cut(s)	256, 719, 779, 795, 842
DpnII	GATC	5 cut(s)	254, 717, 777, 793, 840
DraIII	CACNNNGTG	1 cut(s)	788
Eam1104I	CTCTTC	2 cut(s)	45, 276
EarI	CTCTTC	2 cut(s)	45, 276
Eco130I	CCWWGG	1 cut(s)	933
Eco24I	GRGCYC	1 cut(s)	460
Eco47I	GGWCC	1 cut(s)	387
Eco81I	CCTNAGG	1 cut(s)	852
EcoNI	CCTNNNNNAGG	1 cut(s)	679
EcoO109I	RGGNCCY	1 cut(s)	387
EcoRI	GAATTC	1 cut(s)	71
EcoRII	CCWGG	1 cut(s)	21
EcoT14I	CCWWGG	1 cut(s)	933
EcoT22I	ATGCAT	1 cut(s)	892
EcoT38I	GRGCYC	1 cut(s)	460
ErhI	CCWWGG	1 cut(s)	933
FaeI	CATG	7 cut(s)	139, 360, 545, 571, 640, 692, 937
FaqI	GGGAC	1 cut(s)	373
FatI	CATG	7 cut(s)	135, 356, 541, 567, 636, 688, 933
FauI	CCCGC	1 cut(s)	6
FbaI	TGATCA	1 cut(s)	777
Fnu4HI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
FokI	GGATG	7 cut(s)	40, 232, 509, 623, 827, 899, 965
FriOI	GRGCYC	1 cut(s)	460
Fsp4HI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
FspBI	CTAG	1 cut(s)	243
GluI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
GsaI	CCCAGC	2 cut(s)	697, 885
GsuI	CTGGAG	1 cut(s)	201
Hin1II	CATG	7 cut(s)	139, 360, 545, 571, 640, 692, 937
HincII	GTYRAC	1 cut(s)	64
HindII	GTYRAC	1 cut(s)	64
HinfI	GANTC	5 cut(s)	190, 518, 574, 859, 903
HphI	GGTGA	2 cut(s)	392, 835
Hpy166II	GTNNAC	2 cut(s)	64, 302
Hpy188I	TCNGA	1 cut(s)	430
Hpy188III	TCNNGA	7 cut(s)	44, 76, 233, 515, 568, 812, 923
Hpy8I	GTNNAC	2 cut(s)	64, 302
HpyAV	CCTTC	2 cut(s)	259, 814
HpyCH4III	ACNGT	3 cut(s)	508, 775, 944
HpyCH4V	TGCA	7 cut(s)	413, 545, 551, 616, 791, 890, 996
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 185, 439, 542, 755, 887
HpyF3I	CTNAG	6 cut(s)	117, 429, 516, 810, 852, 912
Hsp92II	CATG	7 cut(s)	139, 360, 545, 571, 640, 692, 937
Ksp22I	TGATCA	1 cut(s)	777
Kzo9I	GATC	5 cut(s)	254, 717, 777, 793, 840
LmnI	GCTCC	4 cut(s)	228, 349, 589, 878
Lsp1109I	GCAGC	4 cut(s)	397, 535, 557, 980
LweI	GCATC	4 cut(s)	210, 226, 758, 877
MaeI	CTAG	1 cut(s)	243
MaeIII	GTNAC	2 cut(s)	245, 419
MalI	GATC	5 cut(s)	256, 719, 779, 795, 842
MbiI	CCGCTC	1 cut(s)	13
MboI	GATC	5 cut(s)	254, 717, 777, 793, 840
MboII	GAAGA	6 cut(s)	32, 293, 301, 344, 595, 950
MflI	RGATCY	2 cut(s)	254, 793
MhlI	GDGCHC	2 cut(s)	460, 760
MluCI	AATT	6 cut(s)	71, 196, 201, 272, 415, 827
MlyI	GAGTC	2 cut(s)	184, 527
MmeI	TCCRAC	2 cut(s)	371, 550
MnlI	CCTC	6 cut(s)	48, 112, 176, 378, 706, 759
Mph1103I	ATGCAT	1 cut(s)	892
MroXI	GAANNNNTTC	1 cut(s)	676
MseI	TTAA	1 cut(s)	315
MspA1I	CMGCKG	4 cut(s)	56, 410, 548, 916
MspR9I	CCNGG	1 cut(s)	23
MvaI	CCWGG	1 cut(s)	23
MwoI	GCNNNNNNNGC	6 cut(s)	113, 185, 439, 542, 755, 887
NcoI	CCATGG	1 cut(s)	933
NdeII	GATC	5 cut(s)	254, 717, 777, 793, 840
NlaIII	CATG	7 cut(s)	139, 360, 545, 571, 640, 692, 937
NlaIV	GGNNCC	3 cut(s)	256, 345, 389
NsiI	ATGCAT	1 cut(s)	892
NspI	RCATGY	2 cut(s)	360, 545
PagI	TCATGA	1 cut(s)	567
PaqCI	CACCTGC	1 cut(s)	138
PciI	ACATGT	1 cut(s)	356
PdmI	GAANNNNTTC	1 cut(s)	676
PfeI	GAWTC	3 cut(s)	574, 859, 903
Pfl23II	CGTACG	1 cut(s)	6
PflFI	GACNNNGTC	1 cut(s)	707
PkrI	GCNGC	5 cut(s)	412, 547, 550, 967, 995
PleI	GAGTC	2 cut(s)	184, 526
PpsI	GAGTC	2 cut(s)	184, 526
PpuMI	RGGWCCY	1 cut(s)	387
PscI	ACATGT	1 cut(s)	356
Psp5II	RGGWCCY	1 cut(s)	387
Psp6I	CCWGG	1 cut(s)	21
PspFI	CCCAGC	2 cut(s)	693, 881
PspGI	CCWGG	1 cut(s)	21
PspLI	CGTACG	1 cut(s)	6
PspN4I	GGNNCC	3 cut(s)	256, 345, 389
PspPI	GGNCC	1 cut(s)	387
PspPPI	RGGWCCY	1 cut(s)	387
PstNI	CAGNNNCTG	1 cut(s)	797
PsuI	RGATCY	2 cut(s)	254, 793
PsyI	GACNNNGTC	1 cut(s)	707
PvuII	CAGCTG	4 cut(s)	56, 410, 548, 916
RsaI	GTAC	3 cut(s)	8, 321, 635
RsaNI	GTAC	3 cut(s)	7, 320, 634
SaqAI	TTAA	1 cut(s)	315
SatI	GCNGC	5 cut(s)	411, 546, 549, 966, 994
Sau3AI	GATC	5 cut(s)	254, 717, 777, 793, 840
Sau96I	GGNCC	1 cut(s)	387
SchI	GAGTC	2 cut(s)	184, 527
ScrFI	CCNGG	1 cut(s)	23
SduI	GDGCHC	2 cut(s)	460, 760
SfaNI	GCATC	4 cut(s)	210, 226, 758, 877
SinI	GGWCC	1 cut(s)	387
SpeI	ACTAGT	1 cut(s)	242
Sse9I	AATT	6 cut(s)	71, 196, 201, 272, 415, 827
SsiI	CCGC	2 cut(s)	13, 966
SspI	AATATT	1 cut(s)	479
SspMI	CTAG	1 cut(s)	243
StyD4I	CCNGG	1 cut(s)	21
StyI	CCWWGG	1 cut(s)	933
TaaI	ACNGT	3 cut(s)	508, 775, 944
TaqI	TCGA	2 cut(s)	45, 711
TasI	AATT	6 cut(s)	71, 196, 201, 272, 415, 827
TatI	WGTACW	1 cut(s)	319
TauI	GCSGC	1 cut(s)	968
TfiI	GAWTC	3 cut(s)	574, 859, 903
Tru1I	TTAA	1 cut(s)	315
Tru9I	TTAA	1 cut(s)	315
TscAI	CASTG	1 cut(s)	221
TseI	GCWGC	4 cut(s)	410, 545, 548, 993
TspDTI	ATGAA	7 cut(s)	84, 302, 345, 556, 580, 587, 677
TspRI	CASTG	1 cut(s)	221
Tth111I	GACNNNGTC	1 cut(s)	707
VpaK11BI	GGWCC	1 cut(s)	387
XagI	CCTNNNNNAGG	1 cut(s)	679
XapI	RAATTY	3 cut(s)	71, 196, 272
XceI	RCATGY	2 cut(s)	360, 545
XmnI	GAANNNNTTC	1 cut(s)	676
XspI	CTAG	1 cut(s)	243
Zsp2I	ATGCAT	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.