AT3G11950

TRAF-type zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0004794
Physical Location & Seq
Reverse (-)
3783087 .. 3785664
2578 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G11950.1

Sequence Viewer

Length: 1719 bp
ATGGATCCTCCTGTGTCGGATCTTGAGAGTATTGAAGATCAGAAAGAAGGAGGACCTTCCTTTCACTGTGATCTTTACGATACACAAGTAGTTCACAAGATTGCTCAGGTTTTTCTCCCTGGTTTAGCCACTGCTTGTGTCGATAACACTACCGGAGATATCTTCAGGAGTCCTGGTTCTGTTGCTGCTGACATTCGAAAAGAAATGATAGAGTACTTGACTCGTAGAAGCGAAACCTTTGTGGCTGAACACATTGTTCTTCAAGGAGGTTCTGAGATTGAAGCTTCTCATGATCCTTTTGACATTATATCTGATTTCATCGATGATTTCGCCACTTCTAAGCGGAATTTGTTCAGCCGGGTTTCGGGTTGGATGCTTAGCGAAAGGAGAGAAGATAATATCGATGATTTCGCGCAAGAGATGGAGATAAGCGGGTTTTGGTTGACTGATCATAGAGAAGGTATCGCTCAGACTTTGCTTAAAAACGTTGATTTTAAAAGCAGTGCACATTGTGAGATGAAATTCCAAACCGAAGGAGAACTCGCCGAGCACGCCATGAATTGTGGGTATAGAACAATGAACTGTGAGAATGAGGGTTGTACTGCGGTGTTTTGTGCGAATCAGATGGAGAATCACGATTCTGTTTGCCCGTTCAAGATCATTCCGTGTGAGCAGAACTGCTCAGAGAGTATCATGAGACGTGATATGGATAGGCATTGTATAACCGTATGTCCTATGAAACTTGTCAACTGTCCATTTCATTCTGTTGGTTGTCTCTCTGATGTACATCAATGTGAGGTCCAACAACATCATTTGGATAATGTTAGCTCTCATTTGATGTACATTCTTCGGAGTATTTACAAGGAAGCATCTCTGGATGATCTCAAACCCCGAGCTGAACAGATACAGCAGTTGTCTACTAGGTTATCTGAAGCTCGTAATGCAAGATCACTAACAAATCTGGTCAAGGAAATTGATGGAAAGCTGGGGCCTTTAGAAATCAAACCAAAGATTGTTACTGACTCGGAATCCGATAAACCTGAAAATACAGAAAAGAAAGCCTTAGAAGAAGCTGAGATTAAAGAAAAACCAGAGACGAGTAACTTAAAAGCTGTTACATTGGAGCAAACCGCGAGAGAAGCTCCGGAAGATAAATTGGTTTCAAAAGAAGTAGATGCTGCAATGGTGAAAGAAGCTGCAAAGAAAGTTTCAGAAGCTGAGATAGCAGACAATGTTAATGAAGAAGGCGAATTAAAAGCGCAGAAGCTTTTAGAAATAGGCGAGTTCATCAAAGAAGGAGACAACAACTCTGCAGATGATTTATCAGAGAGAACCGAAACCAAAGCTCCAGAAGTTGTGGTCATGGATGAGGCTAGAGAGGAGGAGGATAGTGTAGAGACAAAAGACACAAGAACATATGAAACAATCAGAGGTTTAGAGATTGAAGCCAATGAAATGATTGATGAAGAGACAAAGAAATCGACTGAAACCAAAACCGAAGCTCCATCAAGAATAGTCATGGACAAAGAGGGGGATGAAGAGACAAAGAAATCAACTGAAACAGAAACCGAAGCTCCATCGAGAATAGTCATGGAGACAGAGAAGGATGAAGAGACTATGAACTCTAGGGCTCGTGCTTCGGATGAAGCTGAAGCACTGTCAAAGAGCTCTCAAGGTTTTTCTACGGTGCAAGCTGAAACCGTACCCCATATGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 map00130
Pfam Domains
Protein Families
zf-TRAF

Protein Analysis

572

Amino Acids

64.23

Weight (kDa)

4.62

Isoelectric Point (pI)

45.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-TRAF PF02176 212 - 270 5.5e-12 TRAF-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 917
AccII CGCG 2 cut(s) 413, 1133
AccIII TCCGGA 1 cut(s) 1144
AciI CCGC 4 cut(s) 343, 432, 605, 1131
AclI AACGTT 1 cut(s) 486
AclWI GGATC 3 cut(s) 12, 27, 287
AcsI RAATTY 2 cut(s) 346, 521
AcuI CTGAAG 3 cut(s) 148, 951, 1671
AdeI CACNNNGTG 1 cut(s) 512
AfaI GTAC 5 cut(s) 215, 601, 786, 842, 1704
AfiI CCNNNNNNNGG 1 cut(s) 364
AgsI TTSAA 6 cut(s) 35, 263, 281, 655, 1164, 1445
AjiI CACGTC 1 cut(s) 701
AjnI CCWGG 2 cut(s) 118, 172
AloI GAACNNNNNNTCC 2 cut(s) 160, 192
Alw21I GWGCWC 3 cut(s) 508, 552, 1670
Alw26I GTCTC 9 cut(s) 691, 779, 1088, 1293, 1391, 1463, 1535, 1589, 1607
Alw44I GTGCAC 1 cut(s) 504
AlwI GGATC 3 cut(s) 12, 27, 287
AlwNI CAGNNNCTG 1 cut(s) 1217
Ama87I CYCGRG 1 cut(s) 891
Aor13HI TCCGGA 1 cut(s) 1144
AoxI GGCC 1 cut(s) 989
ApaLI GTGCAC 1 cut(s) 504
ApeKI GCWGC 3 cut(s) 185, 1178, 1196
ApoI RAATTY 2 cut(s) 346, 521
Asp700I GAANNNNTTC 1 cut(s) 350
AspLEI GCGC 2 cut(s) 415, 1261
AspS9I GGNCC 3 cut(s) 53, 799, 989
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 1 cut(s) 1198
AsuII TTCGAA 1 cut(s) 196
AvaI CYCGRG 1 cut(s) 891
AvaII GGWCC 2 cut(s) 53, 799
BaeGI GKGCMC 1 cut(s) 508
BaeI ACNNNNGTAYC 4 cut(s) 72, 105, 896, 929
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 1633, 1670
BauI CACGAG 1 cut(s) 1632
Bbv12I GWGCWC 3 cut(s) 508, 552, 1670
BbvI GCAGC 3 cut(s) 172, 1165, 1183
BccI CCATC 5 cut(s) 415, 619, 971, 1513, 1585
BciT130I CCWGG 2 cut(s) 120, 174
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 9 cut(s) 691, 779, 1088, 1293, 1391, 1463, 1535, 1589, 1607
BfaI CTAG 3 cut(s) 921, 1374, 1626
BfmI CTRYAG 1 cut(s) 1311
BisI GCNGC 3 cut(s) 186, 1179, 1197
BlpI GCTNAGC 1 cut(s) 377
BlsI GCNGC 3 cut(s) 187, 1180, 1198
BmcAI AGTACT 1 cut(s) 215
Bme1390I CCNGG 3 cut(s) 120, 174, 359
Bme18I GGWCC 2 cut(s) 53, 799
BmeT110I CYCGRG 1 cut(s) 891
BmgBI CACGTC 1 cut(s) 701
BmgT120I GGNCC 3 cut(s) 53, 799, 989
BmiI GGNNCC 2 cut(s) 6, 990
BmrFI CCNGG 3 cut(s) 120, 174, 359
BmsI GCATC 3 cut(s) 363, 878, 1165
BplI GAGNNNNNCTC 2 cut(s) 1126, 1158
BpmI CTGGAG 1 cut(s) 1332
Bpu10I CCTNAGC 1 cut(s) 105
Bpu1102I GCTNAGC 1 cut(s) 377
Bpu14I TTCGAA 1 cut(s) 196
BpuEI CTTGAG 2 cut(s) 44, 1656
BpuMI CCSGG 1 cut(s) 359
Bsa29I ATCGAT 2 cut(s) 321, 402
BsaBI GATNNNNATC 1 cut(s) 786
BsaJI CCNNGG 1 cut(s) 118
BsaWI WCCGGW 2 cut(s) 152, 1144
BsaXI ACNNNNNCTCC 8 cut(s) 160, 190, 1330, 1360, 1486, 1516, 1558, 1588
Bsc4I CCNNNNNNNGG 1 cut(s) 364
Bse3DI GCAATG 1 cut(s) 1188
Bse8I GATNNNNATC 1 cut(s) 786
BseAI TCCGGA 1 cut(s) 1144
BseBI CCWGG 2 cut(s) 120, 174
BseCI ATCGAT 2 cut(s) 321, 402
BseDI CCNNGG 1 cut(s) 118
BseGI GGATG 6 cut(s) 378, 883, 1372, 1540, 1612, 1648
BseJI GATNNNNATC 1 cut(s) 786
BseLI CCNNNNNNNGG 1 cut(s) 364
BseMI GCAATG 1 cut(s) 1188
BseMII CTCAG 6 cut(s) 119, 264, 482, 696, 1065, 1209
BseRI GAGGAG 2 cut(s) 1394, 1397
BseSI GKGCMC 1 cut(s) 508
BseXI GCAGC 3 cut(s) 172, 1165, 1183
BseYI CCCAGC 1 cut(s) 985
Bsh1236I CGCG 2 cut(s) 413, 1133
BshFI GGCC 1 cut(s) 991
BshVI ATCGAT 2 cut(s) 321, 402
BsiHKAI GWGCWC 3 cut(s) 508, 552, 1670
BsiHKCI CYCGRG 1 cut(s) 891
BsiSI CCGG 3 cut(s) 153, 358, 1145
BslI CCNNNNNNNGG 1 cut(s) 364
BsmAI GTCTC 9 cut(s) 691, 779, 1088, 1293, 1391, 1463, 1535, 1589, 1607
BsmBI CGTCTC 2 cut(s) 691, 1088
BsnI GGCC 1 cut(s) 991
BsoBI CYCGRG 1 cut(s) 891
Bsp119I TTCGAA 1 cut(s) 196
Bsp1286I GDGCHC 4 cut(s) 508, 552, 1633, 1670
Bsp13I TCCGGA 1 cut(s) 1144
Bsp1407I TGTACA 2 cut(s) 784, 840
Bsp143I GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
Bsp1720I GCTNAGC 1 cut(s) 377
BspACI CCGC 4 cut(s) 343, 432, 605, 1131
BspANI GGCC 1 cut(s) 991
BspCNI CTCAG 6 cut(s) 118, 265, 481, 695, 1066, 1210
BspDI ATCGAT 2 cut(s) 321, 402
BspEI TCCGGA 1 cut(s) 1144
BspFNI CGCG 2 cut(s) 413, 1133
BspHI TCATGA 2 cut(s) 289, 693
BspLI GGNNCC 2 cut(s) 6, 990
BspMAI CTGCAG 1 cut(s) 1315
BspPI GGATC 3 cut(s) 12, 27, 287
BspT104I TTCGAA 1 cut(s) 196
BsrDI GCAATG 1 cut(s) 1188
BsrGI TGTACA 2 cut(s) 784, 840
BssECI CCNNGG 1 cut(s) 118
BssMI GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
BssSI CACGAG 1 cut(s) 1632
Bst2BI CACGAG 1 cut(s) 1632
Bst2UI CCWGG 2 cut(s) 120, 174
Bst4CI ACNGT 7 cut(s) 68, 584, 727, 752, 1659, 1687, 1702
Bst6I CTCTTC 3 cut(s) 1461, 1533, 1605
BstAUI TGTACA 2 cut(s) 784, 840
BstBI TTCGAA 1 cut(s) 196
BstC8I GCNNGC 2 cut(s) 552, 1692
BstDEI CTNAG 9 cut(s) 105, 273, 339, 377, 468, 682, 1063, 1074, 1218
BstF5I GGATG 6 cut(s) 378, 883, 1372, 1540, 1612, 1648
BstFNI CGCG 2 cut(s) 413, 1133
BstHHI GCGC 2 cut(s) 415, 1261
BstKTI GATC 9 cut(s) 7, 22, 40, 73, 295, 451, 660, 883, 950
BstMAI GTCTC 9 cut(s) 691, 779, 1088, 1293, 1391, 1463, 1535, 1589, 1607
BstMBI GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
BstMWI GCNNNNNNNGC 4 cut(s) 551, 941, 1139, 1223
BstNI CCWGG 2 cut(s) 120, 174
BstSCI CCNGG 3 cut(s) 118, 172, 357
BstSFI CTRYAG 1 cut(s) 1311
BstSLI GKGCMC 1 cut(s) 508
BstUI CGCG 2 cut(s) 413, 1133
BstV1I GCAGC 3 cut(s) 172, 1165, 1183
BstX2I RGATCY 2 cut(s) 4, 19
BstYI RGATCY 2 cut(s) 4, 19
Bsu15I ATCGAT 2 cut(s) 321, 402
BsuRI GGCC 1 cut(s) 991
BsuTUI ATCGAT 2 cut(s) 321, 402
BtrI CACGTC 1 cut(s) 701
BtsCI GGATG 6 cut(s) 378, 883, 1372, 1540, 1612, 1648
BtsI GCAGTG 2 cut(s) 129, 508
BtsIMutI CAGTG 4 cut(s) 64, 129, 508, 1655
Cac8I GCNNGC 2 cut(s) 552, 1692
CaiI CAGNNNCTG 1 cut(s) 1217
CciI TCATGA 2 cut(s) 289, 693
CfoI GCGC 2 cut(s) 415, 1261
Cfr13I GGNCC 3 cut(s) 53, 799, 989
ClaI ATCGAT 2 cut(s) 321, 402
Csp6I GTAC 5 cut(s) 214, 600, 785, 841, 1703
CviAII CATG 6 cut(s) 290, 556, 694, 1363, 1519, 1591
CviQI GTAC 5 cut(s) 214, 600, 785, 841, 1703
DdeI CTNAG 9 cut(s) 105, 273, 339, 377, 468, 682, 1063, 1074, 1218
DpnI GATC 9 cut(s) 6, 21, 39, 72, 294, 450, 659, 882, 949
DpnII GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
DraI TTTAAA 1 cut(s) 496
DraIII CACNNNGTG 1 cut(s) 512
Eam1104I CTCTTC 3 cut(s) 1461, 1533, 1605
EarI CTCTTC 3 cut(s) 1461, 1533, 1605
Ecl136II GAGCTC 1 cut(s) 1668
Eco24I GRGCYC 2 cut(s) 1633, 1670
Eco32I GATATC 1 cut(s) 160
Eco47I GGWCC 2 cut(s) 53, 799
Eco53kI GAGCTC 1 cut(s) 1668
Eco57I CTGAAG 3 cut(s) 148, 951, 1671
Eco88I CYCGRG 1 cut(s) 891
EcoICRI GAGCTC 1 cut(s) 1668
EcoO109I RGGNCCY 2 cut(s) 53, 989
EcoRII CCWGG 2 cut(s) 118, 172
EcoRV GATATC 1 cut(s) 160
EcoT38I GRGCYC 2 cut(s) 1633, 1670
Esp3I CGTCTC 2 cut(s) 691, 1088
FaeI CATG 6 cut(s) 293, 559, 697, 1366, 1522, 1594
FalI AAGNNNNNCTT 2 cut(s) 1046, 1078
FatI CATG 6 cut(s) 289, 555, 693, 1362, 1518, 1590
FauI CCCGC 1 cut(s) 425
FauNDI CATATG 2 cut(s) 1417, 1710
FbaI TGATCA 1 cut(s) 448
FblI GTMKAC 1 cut(s) 917
Fnu4HI GCNGC 3 cut(s) 186, 1179, 1197
FokI GGATG 6 cut(s) 385, 890, 1379, 1547, 1619, 1655
FriOI GRGCYC 2 cut(s) 1633, 1670
Fsp4HI GCNGC 3 cut(s) 186, 1179, 1197
FspBI CTAG 3 cut(s) 921, 1374, 1626
GlaI GCGC 2 cut(s) 414, 1260
GluI GCNGC 3 cut(s) 186, 1179, 1197
GsaI CCCAGC 1 cut(s) 989
GsuI CTGGAG 1 cut(s) 1332
HaeIII GGCC 1 cut(s) 991
HapII CCGG 3 cut(s) 153, 358, 1145
HhaI GCGC 2 cut(s) 415, 1261
Hin1II CATG 6 cut(s) 293, 559, 697, 1366, 1522, 1594
Hin6I GCGC 2 cut(s) 413, 1259
HinP1I GCGC 2 cut(s) 413, 1259
HincII GTYRAC 2 cut(s) 444, 748
HindII GTYRAC 2 cut(s) 444, 748
HindIII AAGCTT 2 cut(s) 282, 1265
HinfI GANTC 7 cut(s) 169, 220, 619, 631, 638, 1022, 1028
HpaII CCGG 3 cut(s) 153, 358, 1145
HphI GGTGA 1 cut(s) 1198
Hpy166II GTNNAC 5 cut(s) 94, 444, 506, 748, 918
Hpy8I GTNNAC 5 cut(s) 94, 444, 506, 748, 918
HpyAV CCTTC 7 cut(s) 41, 66, 452, 527, 1238, 1289, 1597
HpyCH4III ACNGT 7 cut(s) 68, 584, 727, 752, 1659, 1687, 1702
HpyCH4IV ACGT 2 cut(s) 486, 700
HpyCH4V TGCA 6 cut(s) 506, 944, 1181, 1199, 1313, 1690
HpyF10VI GCNNNNNNNGC 4 cut(s) 551, 941, 1139, 1223
HpyF3I CTNAG 9 cut(s) 105, 273, 339, 377, 468, 682, 1063, 1074, 1218
HpySE526I ACGT 2 cut(s) 486, 700
Hsp92II CATG 6 cut(s) 293, 559, 697, 1366, 1522, 1594
HspAI GCGC 2 cut(s) 413, 1259
Kpn2I TCCGGA 1 cut(s) 1144
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
LmnI GCTCC 5 cut(s) 1123, 1147, 1351, 1507, 1579
Lsp1109I GCAGC 3 cut(s) 172, 1165, 1183
LweI GCATC 3 cut(s) 363, 878, 1165
MaeI CTAG 3 cut(s) 921, 1374, 1626
MaeII ACGT 2 cut(s) 486, 700
MaeIII GTNAC 3 cut(s) 1015, 1100, 1114
MalI GATC 9 cut(s) 6, 21, 39, 72, 294, 450, 659, 882, 949
MboI GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
MflI RGATCY 2 cut(s) 4, 19
MhlI GDGCHC 4 cut(s) 508, 552, 1633, 1670
MluCI AATT 6 cut(s) 346, 521, 559, 972, 1154, 1250
MlyI GAGTC 3 cut(s) 178, 214, 1016
MmeI TCCRAC 2 cut(s) 350, 826
MroI TCCGGA 1 cut(s) 1144
MroXI GAANNNNTTC 1 cut(s) 350
MseI TTAA 7 cut(s) 480, 495, 1080, 1106, 1236, 1253, 1717
MslI CAYNNNNRTG 1 cut(s) 792
MspI CCGG 3 cut(s) 153, 358, 1145
MspR9I CCNGG 3 cut(s) 120, 174, 359
MvaI CCWGG 2 cut(s) 120, 174
MvnI CGCG 2 cut(s) 413, 1133
MwoI GCNNNNNNNGC 4 cut(s) 551, 941, 1139, 1223
NciI CCSGG 1 cut(s) 359
NdeI CATATG 2 cut(s) 1417, 1710
NdeII GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
NlaIII CATG 6 cut(s) 293, 559, 697, 1366, 1522, 1594
NlaIV GGNNCC 2 cut(s) 6, 990
NmeAIII GCCGAG 1 cut(s) 571
NspV TTCGAA 1 cut(s) 196
PagI TCATGA 2 cut(s) 289, 693
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 4 cut(s) 619, 631, 638, 1028
PkrI GCNGC 3 cut(s) 187, 1180, 1198
PleI GAGTC 3 cut(s) 177, 214, 1016
PpsI GAGTC 3 cut(s) 177, 214, 1016
PpuMI RGGWCCY 1 cut(s) 53
Psp124BI GAGCTC 1 cut(s) 1670
Psp1406I AACGTT 1 cut(s) 486
Psp5II RGGWCCY 1 cut(s) 53
Psp6I CCWGG 2 cut(s) 118, 172
PspFI CCCAGC 1 cut(s) 985
PspGI CCWGG 2 cut(s) 118, 172
PspN4I GGNNCC 2 cut(s) 6, 990
PspPI GGNCC 3 cut(s) 53, 799, 989
PspPPI RGGWCCY 1 cut(s) 53
PstI CTGCAG 1 cut(s) 1315
PstNI CAGNNNCTG 1 cut(s) 1217
PsuI RGATCY 2 cut(s) 4, 19
RsaI GTAC 5 cut(s) 215, 601, 786, 842, 1704
RsaNI GTAC 5 cut(s) 214, 600, 785, 841, 1703
RseI CAYNNNNRTG 1 cut(s) 792
SacI GAGCTC 1 cut(s) 1670
SaqAI TTAA 7 cut(s) 480, 495, 1080, 1106, 1236, 1253, 1717
SatI GCNGC 3 cut(s) 186, 1179, 1197
Sau3AI GATC 9 cut(s) 4, 19, 37, 70, 292, 448, 657, 880, 947
Sau96I GGNCC 3 cut(s) 53, 799, 989
ScaI AGTACT 1 cut(s) 215
SchI GAGTC 3 cut(s) 178, 214, 1016
ScrFI CCNGG 3 cut(s) 120, 174, 359
SduI GDGCHC 4 cut(s) 508, 552, 1633, 1670
SfaNI GCATC 3 cut(s) 363, 878, 1165
SfcI CTRYAG 1 cut(s) 1311
SfuI TTCGAA 1 cut(s) 196
SinI GGWCC 2 cut(s) 53, 799
SmiMI CAYNNNNRTG 1 cut(s) 792
SmlI CTYRAG 2 cut(s) 23, 1671
SmoI CTYRAG 2 cut(s) 23, 1671
Sse9I AATT 6 cut(s) 346, 521, 559, 972, 1154, 1250
SsiI CCGC 4 cut(s) 343, 432, 605, 1131
SspMI CTAG 3 cut(s) 921, 1374, 1626
SstI GAGCTC 1 cut(s) 1670
StyD4I CCNGG 3 cut(s) 118, 172, 357
TaaI ACNGT 7 cut(s) 68, 584, 727, 752, 1659, 1687, 1702
TaiI ACGT 2 cut(s) 489, 703
TaqI TCGA 6 cut(s) 141, 196, 321, 402, 1481, 1580
TasI AATT 6 cut(s) 346, 521, 559, 972, 1154, 1250
TatI WGTACW 4 cut(s) 213, 599, 784, 840
TfiI GAWTC 4 cut(s) 619, 631, 638, 1028
Tru1I TTAA 7 cut(s) 480, 495, 1080, 1106, 1236, 1253, 1717
Tru9I TTAA 7 cut(s) 480, 495, 1080, 1106, 1236, 1253, 1717
TscAI CASTG 4 cut(s) 71, 136, 508, 1662
TseI GCWGC 3 cut(s) 185, 1178, 1196
TspGWI ACGGA 1 cut(s) 654
TspRI CASTG 4 cut(s) 71, 136, 508, 1662
VneI GTGCAC 1 cut(s) 504
VpaK11BI GGWCC 2 cut(s) 53, 799
XapI RAATTY 2 cut(s) 346, 521
XmiI GTMKAC 1 cut(s) 917
XmnI GAANNNNTTC 1 cut(s) 350
XspI CTAG 3 cut(s) 921, 1374, 1626
ZrmI AGTACT 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.