RLG00000029742

TRAF-type zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0004794
Physical Location & Seq
Forward (+)
48217280 .. 48220567
3288 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029742

Sequence Viewer

Length: 2235 bp
ATGATGCAGGAATTGTCAACCATCGATGACCTACCTGCGACTAATGTGGAAATGGAACCGGAAAAGATAGAAGATGGGAAAGATGGAGGTCCTTCATTCCACTGTAAACTTTACAGCACGGAATTAGTCCACAAGATAGCTCAGGTTTTCATTCCTGGATTAGCTACAGCATGTGTTGATAACACATCTGGTGATATCTTCAAGACCCCTGCTTCTGTGGCCGCCGATGTGAGAAAGGAAATGGTGGAGTATATCACTCAAAGAAGTGAGAATTTTGTTGCAGAATCTGTTATCCTAGAAGGGGGCCAAGATGGACAAGTATCTGATCATCCCTATGACATTATTTCTGATTTTGTTGATGACTTTGCAAGTTCCAAGAGAAATTTGTTTAGTCGGGTTTCGGGATGGCTGCTCAGTGAAAAGAGAGAAGATAAAATAGATGATTTTGTTCAAGAGATGGAAATAAATGGGTTTTGGTTGGTTGATAAAAGAGAAACAATAGCACAGAGTTTGCTAAAGAATGTCGACCTTAAGAATGAGCATCACTGCGATATGAAATTTCACACCCCAGAGGAGCTTGAAGCGCATGTTCTAAAGTGTAGCTATAGGTCTATGAGTTGCATACATGAAGGATGTAATGCCATATTTTGTGCAAGTCAGGTGGATAAACATGATGCAGTTTGCCCCTTCAAGATAATTCCATGCGAACAAAACTGCTCCGACATGATCATGAGACGTGAAATGGACAGACATTGTATTACCATCTGTCCAATGAAGCTTGTTAGTTGTCCGTTCTATGCAGTGGGTTGTCAATCCCCGGTACCACATTGTAAGCTTGAGCAGCATCGTTCAGATGATCTCCATTCTCACATGCTGTTTGTTCTACAAAGTATTCATAAGGAAGCATCTATGGAAGATCTGAAAAGAAGGCTGGAGCAACTAAAAGACGCATCTTTATCCAATAACTTAGCACAAGCTCGAGATGTGAGATCACTAACCTCTGCAGTCAAGGATCTTGAAGCAAAACTAGGGCCGATGGAAATTAGCAGGAAACACCATGAGGATCTTGAAGCAGAACATGGGCCAGAGGAAGTAGGCAGCAAAAGCAAAACTCCAGAGGATGTGGAATCAGGGCCAAAAGAAGTGAGTAATAAACCCGAGGAGGACTTTGAAGTACAACCAGCACCAAAGGAAGCTAGCCAACAATCGGAGTATCTTGAAGCAAAATCAGAGCCAAAGGAAGTTAGTACTAAATCTGTGGAGGATCTTGAAGCTAAACCAGCACCAAAGGAAGATCTTGAAGCTAAACCAGCACCAAAGGAACTGAGCACCAAACCTGCAGAAGATCTTGAAGCAAAACCAGCTCCAAAGGAAGTCAGTAGTTCAAAAGCCCCCAAAGATGTTGAAGAAAGGCCAGTGGGAGTGAGTGGTAAGGCTCCAACAGGACATGAAGCTAAACCAGCACCAAAGGAACTGAGCACCAAACCTGCAGAAGATCTTGAAGCAAAACCAGCTCTGAAGGAAGTCAGTAGTTCAGAACCCCCCGAAGATGTTGAAACAAAAACAGTGGAAATAAGCGCTAAAGCCCCTACAGGACATGAAGAAAAATTAGGGACAAAGGAACTGAGCACCAAACCTGCAGAAGGTCGTGAGGCAAAACCAGCTCCGAAGGAAGTCACTAGCTCAAAAACCCCCAAAGATGTTGAAGAAAGGCCAGTGGGAGTGAGTGGTAAGGATCCAACAGGACATGAAGCTAAACCAGCACCAAAGGAACTGAGCACCAAACCTGCAGAAGATTGTGAAGCAAAACCAGCTCCGAAAGAAGTCAGTAGTTCAAAACCCCCGGAAGATGTTGAAGCAAGGTCAGCGGGAGTGAGCGGCAAGGCCCCAACAGGACACGAAGAAAAATTAGGGACAAAGGAAGTGAGAAGCGAATTGCCGGAGGAGCTCGAAACAGAACTAGGAACAAAGGAAGTGGGAAGCAAACCACCAGAGGAACTTGAAACACAACTAGGAATCAAGGAAGTGAGCAGCAAACTTCAACAGGAACTTGAAACAAAACTAGGAAGAAAAGAGGTAGGCAGCAAAACCCCAGAAGGATACGAAAGACAATTAGTAACAAAGGATGTCAACAGCAAACCTGAGGAACTTAAAAAAGAACTAGGGACAAAGGAAGTGAGCAGCAAACCCCCAGAGGAACTCGAGAAATTAAGTGACAAAGGAAGTGAGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 map00130
Pfam Domains
Protein Families
zf-TRAF

Protein Analysis

745

Amino Acids

81.98

Weight (kDa)

5.05

Isoelectric Point (pI)

48.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-TRAF PF02176 224 - 282 9.5e-11 TRAF-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 5 cut(s) 43, 1345, 1495, 1645, 1795
Acc65I GGTACC 1 cut(s) 820
AccB1I GGYRCC 1 cut(s) 820
AccBSI CCGCTC 1 cut(s) 1878
AccI GTMKAC 1 cut(s) 525
AciI CCGC 3 cut(s) 222, 1868, 1878
AclWI GGATC 5 cut(s) 1020, 1071, 1272, 1730, 1743
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 3 cut(s) 271, 382, 557
AcuI CTGAAG 1 cut(s) 1538
AfaI GTAC 3 cut(s) 822, 1176, 1249
AfeI AGCGCT 1 cut(s) 1579
AfiI CCNNNNNNNGG 3 cut(s) 301, 1207, 1643
AflII CTTAAG 1 cut(s) 530
AjiI CACGTC 1 cut(s) 737
AjnI CCWGG 1 cut(s) 154
Alw21I GWGCWC 5 cut(s) 1331, 1481, 1631, 1781, 1950
Alw26I GTCTC 1 cut(s) 727
AlwI GGATC 5 cut(s) 1020, 1071, 1272, 1730, 1743
AlwNI CAGNNNCTG 1 cut(s) 287
Ama87I CYCGRG 3 cut(s) 978, 1157, 2201
Aor51HI AGCGCT 1 cut(s) 1579
AoxI GGCC 8 cut(s) 219, 304, 1031, 1082, 1133, 1412, 1712, 1884
ApeKI GCWGC 6 cut(s) 409, 841, 1098, 2031, 2082, 2181
ApoI RAATTY 3 cut(s) 271, 382, 557
Asp718I GGTACC 1 cut(s) 820
AspLEI GCGC 2 cut(s) 586, 1580
AspS9I GGNCC 6 cut(s) 89, 304, 1031, 1082, 1133, 1885
AsuC2I CCSGG 2 cut(s) 818, 1844
AsuHPI GGTGA 1 cut(s) 203
AsuNHI GCTAGC 1 cut(s) 1196
AvaI CYCGRG 3 cut(s) 978, 1157, 2201
AvaII GGWCC 1 cut(s) 89
AxyI CCTNAGG 1 cut(s) 2142
BamHI GGATCC 1 cut(s) 1735
BanI GGYRCC 1 cut(s) 820
BanII GRGCYC 1 cut(s) 1950
Bbv12I GWGCWC 5 cut(s) 1331, 1481, 1631, 1781, 1950
BbvI GCAGC 6 cut(s) 396, 853, 1110, 2043, 2094, 2193
BccI CCATC 8 cut(s) 29, 68, 77, 305, 399, 451, 770, 1030
BciT130I CCWGG 1 cut(s) 156
BciVI GTATCC 1 cut(s) 2093
BclI TGATCA 2 cut(s) 325, 726
BcnI CCSGG 2 cut(s) 818, 1844
BcoDI GTCTC 1 cut(s) 727
BfaI CTAG 8 cut(s) 296, 1028, 1197, 1680, 1961, 2012, 2063, 2162
BfmI CTRYAG 8 cut(s) 165, 604, 1002, 1338, 1488, 1590, 1638, 1788
BfoI RGCGCY 1 cut(s) 1581
BfrI CTTAAG 1 cut(s) 530
BfuAI ACCTGC 5 cut(s) 43, 1345, 1495, 1645, 1795
BfuI GTATCC 1 cut(s) 2093
BglII AGATCT 4 cut(s) 916, 1294, 1345, 1495
BisI GCNGC 8 cut(s) 222, 410, 842, 1099, 1879, 2032, 2083, 2182
BlsI GCNGC 8 cut(s) 223, 411, 843, 1100, 1880, 2033, 2084, 2183
BmcAI AGTACT 1 cut(s) 1249
Bme1390I CCNGG 3 cut(s) 156, 818, 1844
Bme18I GGWCC 1 cut(s) 89
BmeT110I CYCGRG 3 cut(s) 978, 1157, 2201
BmgBI CACGTC 1 cut(s) 737
BmgT120I GGNCC 6 cut(s) 89, 304, 1031, 1082, 1133, 1885
BmiI GGNNCC 6 cut(s) 57, 305, 822, 1437, 1737, 1887
BmrFI CCNGG 3 cut(s) 156, 818, 1844
BmsI GCATC 5 cut(s) 550, 664, 853, 914, 959
BmtI GCTAGC 1 cut(s) 1200
BpmI CTGGAG 2 cut(s) 953, 1098
Bpu10I CCTNAGC 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 857
BpuMI CCSGG 2 cut(s) 818, 1844
Bsa29I ATCGAT 1 cut(s) 24
BsaJI CCNNGG 3 cut(s) 816, 1158, 1842
BsaWI WCCGGW 1 cut(s) 58
Bsc4I CCNNNNNNNGG 3 cut(s) 301, 1207, 1643
Bse1I ACTGG 2 cut(s) 1415, 1715
Bse21I CCTNAGG 1 cut(s) 2142
BseBI CCWGG 1 cut(s) 156
BseCI ATCGAT 1 cut(s) 24
BseDI CCNNGG 3 cut(s) 816, 1158, 1842
BseGI GGATG 5 cut(s) 328, 410, 638, 1126, 2131
BseLI CCNNNNNNNGG 3 cut(s) 301, 1207, 1643
BseMII CTCAG 7 cut(s) 155, 427, 1316, 1466, 1616, 1766, 2133
BseNI ACTGG 2 cut(s) 1415, 1715
BseRI GAGGAG 3 cut(s) 587, 1175, 1958
BseXI GCAGC 6 cut(s) 396, 853, 1110, 2043, 2094, 2193
BshFI GGCC 8 cut(s) 221, 306, 1033, 1084, 1135, 1414, 1714, 1886
BshNI GGYRCC 1 cut(s) 820
BshVI ATCGAT 1 cut(s) 24
BsiHKAI GWGCWC 5 cut(s) 1331, 1481, 1631, 1781, 1950
BsiHKCI CYCGRG 3 cut(s) 978, 1157, 2201
BsiSI CCGG 4 cut(s) 59, 818, 1844, 1940
BslFI GGGAC 3 cut(s) 1627, 1927, 2179
BslI CCNNNNNNNGG 3 cut(s) 301, 1207, 1643
BsmAI GTCTC 1 cut(s) 727
BsmBI CGTCTC 1 cut(s) 727
BsmFI GGGAC 3 cut(s) 1627, 1927, 2179
BsnI GGCC 8 cut(s) 221, 306, 1033, 1084, 1135, 1414, 1714, 1886
BsoBI CYCGRG 3 cut(s) 978, 1157, 2201
Bsp1286I GDGCHC 5 cut(s) 1331, 1481, 1631, 1781, 1950
BspACI CCGC 3 cut(s) 222, 1868, 1878
BspANI GGCC 8 cut(s) 221, 306, 1033, 1084, 1135, 1414, 1714, 1886
BspCNI CTCAG 7 cut(s) 154, 426, 1317, 1467, 1617, 1767, 2134
BspDI ATCGAT 1 cut(s) 24
BspHI TCATGA 1 cut(s) 729
BspLI GGNNCC 6 cut(s) 57, 305, 822, 1437, 1737, 1887
BspMAI CTGCAG 5 cut(s) 1006, 1342, 1492, 1642, 1792
BspMI ACCTGC 5 cut(s) 43, 1345, 1495, 1645, 1795
BspOI GCTAGC 1 cut(s) 1200
BspPI GGATC 5 cut(s) 1020, 1071, 1272, 1730, 1743
BspT107I GGYRCC 1 cut(s) 820
BspTI CTTAAG 1 cut(s) 530
BsrBI CCGCTC 1 cut(s) 1878
BsrI ACTGG 2 cut(s) 1415, 1715
BssECI CCNNGG 3 cut(s) 816, 1158, 1842
Bst2UI CCWGG 1 cut(s) 156
Bst4CI ACNGT 2 cut(s) 104, 1567
BstAFI CTTAAG 1 cut(s) 530
BstC8I GCNNGC 1 cut(s) 1198
BstDEI CTNAG 8 cut(s) 141, 413, 967, 1325, 1475, 1625, 1775, 2142
BstENI CCTNNNNNAGG 1 cut(s) 1641
BstF5I GGATG 5 cut(s) 328, 410, 638, 1126, 2131
BstH2I RGCGCY 1 cut(s) 1581
BstHHI GCGC 2 cut(s) 586, 1580
BstMAI GTCTC 1 cut(s) 727
BstNI CCWGG 1 cut(s) 156
BstNSI RCATGY 3 cut(s) 174, 590, 874
BstSCI CCNGG 3 cut(s) 154, 816, 1842
BstSFI CTRYAG 8 cut(s) 165, 604, 1002, 1338, 1488, 1590, 1638, 1788
BstV1I GCAGC 6 cut(s) 396, 853, 1110, 2043, 2094, 2193
BstX2I RGATCY 8 cut(s) 916, 1012, 1063, 1264, 1294, 1345, 1495, 1735
BstYI RGATCY 8 cut(s) 916, 1012, 1063, 1264, 1294, 1345, 1495, 1735
Bsu15I ATCGAT 1 cut(s) 24
Bsu36I CCTNAGG 1 cut(s) 2142
BsuI GTATCC 1 cut(s) 2093
BsuRI GGCC 8 cut(s) 221, 306, 1033, 1084, 1135, 1414, 1714, 1886
BsuTUI ATCGAT 1 cut(s) 24
BtrI CACGTC 1 cut(s) 737
BtsCI GGATG 5 cut(s) 328, 410, 638, 1126, 2131
BtsI GCAGTG 2 cut(s) 544, 807
BtsIMutI CAGTG 7 cut(s) 100, 421, 544, 807, 1422, 1572, 1722
BveI ACCTGC 5 cut(s) 43, 1345, 1495, 1645, 1795
Cac8I GCNNGC 1 cut(s) 1198
CaiI CAGNNNCTG 1 cut(s) 287
CciI TCATGA 1 cut(s) 729
CfoI GCGC 2 cut(s) 586, 1580
Cfr13I GGNCC 6 cut(s) 89, 304, 1031, 1082, 1133, 1885
ClaI ATCGAT 1 cut(s) 24
CseI GACGC 1 cut(s) 956
Csp6I GTAC 3 cut(s) 821, 1175, 1248
CspCI CAANNNNNGTGG 6 cut(s) 642, 677, 1548, 1583, 1956, 1991
CviQI GTAC 3 cut(s) 821, 1175, 1248
DdeI CTNAG 8 cut(s) 141, 413, 967, 1325, 1475, 1625, 1775, 2142
EaeI YGGCCR 1 cut(s) 219
Ecl136II GAGCTC 1 cut(s) 1948
Eco24I GRGCYC 1 cut(s) 1950
Eco32I GATATC 1 cut(s) 196
Eco47I GGWCC 1 cut(s) 89
Eco47III AGCGCT 1 cut(s) 1579
Eco53kI GAGCTC 1 cut(s) 1948
Eco57I CTGAAG 1 cut(s) 1538
Eco81I CCTNAGG 1 cut(s) 2142
Eco88I CYCGRG 3 cut(s) 978, 1157, 2201
EcoICRI GAGCTC 1 cut(s) 1948
EcoNI CCTNNNNNAGG 1 cut(s) 1641
EcoO109I RGGNCCY 2 cut(s) 89, 1885
EcoRII CCWGG 1 cut(s) 154
EcoRV GATATC 1 cut(s) 196
EcoT38I GRGCYC 1 cut(s) 1950
Esp3I CGTCTC 1 cut(s) 727
FaqI GGGAC 3 cut(s) 1627, 1927, 2179
FauI CCCGC 1 cut(s) 1861
FbaI TGATCA 2 cut(s) 325, 726
FblI GTMKAC 1 cut(s) 525
Fnu4HI GCNGC 8 cut(s) 222, 410, 842, 1099, 1879, 2032, 2083, 2182
FokI GGATG 5 cut(s) 315, 417, 645, 1133, 2138
FriOI GRGCYC 1 cut(s) 1950
Fsp4HI GCNGC 8 cut(s) 222, 410, 842, 1099, 1879, 2032, 2083, 2182
FspBI CTAG 8 cut(s) 296, 1028, 1197, 1680, 1961, 2012, 2063, 2162
GlaI GCGC 2 cut(s) 585, 1579
GluI GCNGC 8 cut(s) 222, 410, 842, 1099, 1879, 2032, 2083, 2182
GsuI CTGGAG 2 cut(s) 953, 1098
HaeII RGCGCY 1 cut(s) 1581
HaeIII GGCC 8 cut(s) 221, 306, 1033, 1084, 1135, 1414, 1714, 1886
HapII CCGG 4 cut(s) 59, 818, 1844, 1940
HgaI GACGC 1 cut(s) 956
HhaI GCGC 2 cut(s) 586, 1580
Hin6I GCGC 2 cut(s) 584, 1578
HinP1I GCGC 2 cut(s) 584, 1578
HincII GTYRAC 3 cut(s) 18, 526, 2131
HindII GTYRAC 3 cut(s) 18, 526, 2131
HindIII AAGCTT 2 cut(s) 776, 833
HinfI GANTC 3 cut(s) 284, 1127, 2016
HpaII CCGG 4 cut(s) 59, 818, 1844, 1940
HphI GGTGA 1 cut(s) 203
Hpy166II GTNNAC 5 cut(s) 18, 107, 130, 526, 2131
Hpy8I GTNNAC 5 cut(s) 18, 107, 130, 526, 2131
HpyAV CCTTC 9 cut(s) 102, 293, 623, 697, 921, 1513, 1637, 1663, 2090
HpyCH4III ACNGT 2 cut(s) 104, 1567
HpyCH4IV ACGT 1 cut(s) 736
HpyF3I CTNAG 8 cut(s) 141, 413, 967, 1325, 1475, 1625, 1775, 2142
HpySE526I ACGT 1 cut(s) 736
HspAI GCGC 2 cut(s) 584, 1578
KpnI GGTACC 1 cut(s) 824
Ksp22I TGATCA 2 cut(s) 325, 726
LmnI GCTCC 8 cut(s) 574, 722, 934, 1369, 1441, 1669, 1819, 1945
Lsp1109I GCAGC 6 cut(s) 396, 853, 1110, 2043, 2094, 2193
LweI GCATC 5 cut(s) 550, 664, 853, 914, 959
MaeI CTAG 8 cut(s) 296, 1028, 1197, 1680, 1961, 2012, 2063, 2162
MaeII ACGT 1 cut(s) 736
MaeIII GTNAC 3 cut(s) 1675, 2116, 2213
MbiI CCGCTC 1 cut(s) 1878
MflI RGATCY 8 cut(s) 916, 1012, 1063, 1264, 1294, 1345, 1495, 1735
MhlI GDGCHC 5 cut(s) 1331, 1481, 1631, 1781, 1950
MmeI TCCRAC 3 cut(s) 744, 1463, 1763
MseI TTAA 3 cut(s) 531, 2151, 2210
MslI CAYNNNNRTG 2 cut(s) 333, 728
MspA1I CMGCKG 1 cut(s) 1868
MspCI CTTAAG 1 cut(s) 530
MspI CCGG 4 cut(s) 59, 818, 1844, 1940
MspR9I CCNGG 3 cut(s) 156, 818, 1844
MvaI CCWGG 1 cut(s) 156
NciI CCSGG 2 cut(s) 818, 1844
NheI GCTAGC 1 cut(s) 1196
NlaIV GGNNCC 6 cut(s) 57, 305, 822, 1437, 1737, 1887
NmuCI GTSAC 2 cut(s) 1675, 2213
NspI RCATGY 3 cut(s) 174, 590, 874
PaeR7I CTCGAG 2 cut(s) 978, 2201
PagI TCATGA 1 cut(s) 729
PfeI GAWTC 3 cut(s) 284, 1127, 2016
PfoI TCCNGGA 1 cut(s) 154
PkrI GCNGC 8 cut(s) 223, 411, 843, 1100, 1880, 2033, 2084, 2183
PpuMI RGGWCCY 1 cut(s) 89
Psp124BI GAGCTC 1 cut(s) 1950
Psp5II RGGWCCY 1 cut(s) 89
Psp6I CCWGG 1 cut(s) 154
PspGI CCWGG 1 cut(s) 154
PspN4I GGNNCC 6 cut(s) 57, 305, 822, 1437, 1737, 1887
PspPI GGNCC 6 cut(s) 89, 304, 1031, 1082, 1133, 1885
PspPPI RGGWCCY 1 cut(s) 89
PstI CTGCAG 5 cut(s) 1006, 1342, 1492, 1642, 1792
PstNI CAGNNNCTG 1 cut(s) 287
PsuI RGATCY 8 cut(s) 916, 1012, 1063, 1264, 1294, 1345, 1495, 1735
RsaI GTAC 3 cut(s) 822, 1176, 1249
RsaNI GTAC 3 cut(s) 821, 1175, 1248
RseI CAYNNNNRTG 2 cut(s) 333, 728
SacI GAGCTC 1 cut(s) 1950
SalI GTCGAC 1 cut(s) 524
SaqAI TTAA 3 cut(s) 531, 2151, 2210
SatI GCNGC 8 cut(s) 222, 410, 842, 1099, 1879, 2032, 2083, 2182
Sau96I GGNCC 6 cut(s) 89, 304, 1031, 1082, 1133, 1885
ScaI AGTACT 1 cut(s) 1249
ScrFI CCNGG 3 cut(s) 156, 818, 1844
SduI GDGCHC 5 cut(s) 1331, 1481, 1631, 1781, 1950
SfaNI GCATC 5 cut(s) 550, 664, 853, 914, 959
SfcI CTRYAG 8 cut(s) 165, 604, 1002, 1338, 1488, 1590, 1638, 1788
Sfr274I CTCGAG 2 cut(s) 978, 2201
SinI GGWCC 1 cut(s) 89
SlaI CTCGAG 2 cut(s) 978, 2201
SmiMI CAYNNNNRTG 2 cut(s) 333, 728
SmlI CTYRAG 4 cut(s) 530, 836, 978, 2201
SmoI CTYRAG 4 cut(s) 530, 836, 978, 2201
SsiI CCGC 3 cut(s) 222, 1868, 1878
SspMI CTAG 8 cut(s) 296, 1028, 1197, 1680, 1961, 2012, 2063, 2162
SstI GAGCTC 1 cut(s) 1950
StyD4I CCNGG 3 cut(s) 154, 816, 1842
TaaI ACNGT 2 cut(s) 104, 1567
TaiI ACGT 1 cut(s) 739
TaqI TCGA 5 cut(s) 24, 525, 979, 1950, 2202
TatI WGTACW 2 cut(s) 1174, 1247
TauI GCSGC 2 cut(s) 224, 1881
TfiI GAWTC 3 cut(s) 284, 1127, 2016
Tru1I TTAA 3 cut(s) 531, 2151, 2210
Tru9I TTAA 3 cut(s) 531, 2151, 2210
TscAI CASTG 7 cut(s) 107, 421, 551, 807, 1422, 1572, 1722
TseFI GTSAC 2 cut(s) 1675, 2213
TseI GCWGC 6 cut(s) 409, 841, 1098, 2031, 2082, 2181
Tsp45I GTSAC 2 cut(s) 1675, 2213
TspDTI ATGAA 9 cut(s) 84, 139, 569, 642, 788, 884, 1464, 1614, 1764
TspGWI ACGGA 2 cut(s) 134, 780
TspRI CASTG 7 cut(s) 107, 421, 551, 807, 1422, 1572, 1722
Vha464I CTTAAG 1 cut(s) 530
VpaK11BI GGWCC 1 cut(s) 89
XagI CCTNNNNNAGG 1 cut(s) 1641
XapI RAATTY 3 cut(s) 271, 382, 557
XceI RCATGY 3 cut(s) 174, 590, 874
XhoI CTCGAG 2 cut(s) 978, 2201
XmiI GTMKAC 1 cut(s) 525
XspI CTAG 8 cut(s) 296, 1028, 1197, 1680, 1961, 2012, 2063, 2162
ZrmI AGTACT 1 cut(s) 1249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.