MD02G1263700.v1.1

TRAF-type zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0004794
Physical Location & Seq
Forward (+)
31779026 .. 31782248
3223 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1263700.v1.1.491

Sequence Viewer

Length: 1839 bp
ATGATGCAGGTGGAATTGTCTACCATTGATGATCTGCCTGCAAGTAACGTGGAACTCAAACCAGAAAAGTTTGAAGGCGGGAAGGATGGAGGTCCTTCGTACCATTGTGATCTTTACGACACAGAATTAGTTCACAAGATAGCTCAAGTGTTCATCCCTGGATTAGCTACAGCTTGTGTTGACAACACGTCTGGTGATATCTTCCGGACCCCTGGTTCGGTGGCTGCTGATATCAGAAAGGAAATGGTGGAGTATATTACTCAGAGAAGCCAAAATTTTGTGGCAGAATCTGTTATCTTGGAAGATAGCACAGATGCACAAGTATCTGATCATCCGTATGATATCATTTCTGATTTTGTCGATGACTTTGCAAGTTCCAAGAGAAATCTGTTTGGTAGGGTTTCAGGATGGCTGCTAAGTGAAAAAAGAGAAGATAAAATAGATGATTTCGTTCAAGAGATGGAAATTAACGGGTTTTGGTTGATTGATAAAAGAGAAGCAATAGCACAGACTCTACTTAAGAATGTCGACTTTAAGAATGAACATCACTGCAACATGAAGTTTAACTCTCCAGAAGCGCTTGCTGAGCATGCTTCAAGCTGCAGTTTTAGGTCTATGACTTGCACAAATGAAGGGTGTACTACTGTATTTTGTGCAAGTCACATGGAGAAACATGATTCAATTTGCCCGTTCAAGATAATTCCATGTGAACAAAACTGCTCCAATACCATCATGAGACGCCAGATGGACAGACATTGTATTACTGTCTGTCCAATGAAGCTTGTTAGTTGTCCTTTCTATGCAGTGGGTTGTCAATCCCCTGTACCACATTGTAAAGTTGAGCAACATCATTCAGATGATCTCCATTCTCACTTGCTTTTCATTCTTCAAACTATTCACAAGGAAGCGTCTGCAGAGGATCTAAAGAAACGAGTGGAGCAAGTAGAAAAGGCATCTTCATCCAGTCAATTAGCGGAAGCTCGAGATGTGAGGTCGTTAACATCTGCAGTCAAGGGTATTGAAGAGAAACTTGGTCCAATGGAAGTGACCAGCAAGCACCCAGAGGATGTTGAATCAAAGCTAGGGCCAGTGGATTTGAGCAGCAAAAATCCAGAGGATCCTGAAGCAATATTAGGGCCAACGGAAGTGACCAGCAAACCTGCTGAGGATCTTGAAGCAAAATTTCAGCCACAGGAAGTGAACAGAAGTGCACCAGAGGATGTTGAAACAAAACTAGGGCCAAAGGAAGTGAGCAGCAAACCCCCAGAGGATCCTGAAACGAAGGTTGGGACAAAGGAACTGAGCAGAAAATCCCCAGAGGATGTTGAAAAAAAGCTGGCACCAAAGGAAGTGGACAACAAACCCCCCAAGGATCCTGAAACAAAGGTTGGGCCAAAGGAACTGAGCAGAAAATCCCCGCAGCATGTTGAAGAAAAACTAGCGCCAAAGGAAGTGGACAGCAAGCCCCTAGAGGATCATGAAGCAAAAACCAGGACAAGGGATGTGGACAACGAATCCCTGCAGGATACTGAAGCAAAATGGGAGCCAAAGGATGTGAACAAAGAATCCCCCAAGGATATTGAAGCAAAACACGGACCAAAGGAAGTGAACAATGAACCCCCCAAGGATATTGAAGCAAAAGTACGGTCAAAGGAAGTGAGTGGCAAATACTCGAAGGATATTGAAGCAAACGTAGGTTGTAATGAAATCAGCAGCAAACACCAGAAGGATCTCGAAGCAAAACTGGGGCCGACAGAAGTGAGCAGCAAACACAAGGATGGTGGAGAGAGTAGGGAAACCTCAGCCTCTGAAAATGCCTTGGAGGATGCTGAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 map00130
Pfam Domains
Protein Families
zf-TRAF

Protein Analysis

613

Amino Acids

68.16

Weight (kDa)

5.08

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-TRAF PF02176 225 - 283 2e-10 TRAF-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1168
AccB1I GGYRCC 1 cut(s) 1339
AccI GTMKAC 2 cut(s) 20, 528
AccIII TCCGGA 1 cut(s) 204
AciI CCGC 3 cut(s) 78, 974, 1418
AcsI RAATTY 2 cut(s) 274, 1181
AcuI CTGAAG 2 cut(s) 1143, 1551
AcyI GRCGYC 1 cut(s) 739
AfaI GTAC 4 cut(s) 101, 640, 825, 1644
AfeI AGCGCT 1 cut(s) 579
AfiI CCNNNNNNNGG 2 cut(s) 217, 1497
AflII CTTAAG 1 cut(s) 518
AflIII ACRYGT 1 cut(s) 186
AhdI GACNNNNNGTC 1 cut(s) 187
AjiI CACGTC 1 cut(s) 189
AjnI CCWGG 3 cut(s) 157, 211, 1490
AjuI GAANNNNNNNTTGG 6 cut(s) 1014, 1046, 1269, 1301, 1371, 1403
AloI GAACNNNNNNTCC 4 cut(s) 199, 231, 1550, 1582
AluBI AGCT 8 cut(s) 143, 167, 173, 600, 781, 980, 1081, 1336
AluI AGCT 8 cut(s) 143, 167, 173, 600, 781, 980, 1081, 1336
Alw21I GWGCWC 1 cut(s) 1213
Alw26I GTCTC 1 cut(s) 730
Alw44I GTGCAC 1 cut(s) 1209
AlwNI CAGNNNCTG 2 cut(s) 290, 1808
Ama87I CYCGRG 1 cut(s) 981
Aor13HI TCCGGA 1 cut(s) 204
Aor51HI AGCGCT 1 cut(s) 579
AoxI GGCC 5 cut(s) 1085, 1136, 1238, 1391, 1748
ApaLI GTGCAC 1 cut(s) 1209
ApeKI GCWGC 8 cut(s) 224, 412, 600, 1101, 1254, 1420, 1713, 1764
ApoI RAATTY 2 cut(s) 274, 1181
ArsI GACNNNNNNTTYG 4 cut(s) 199, 231, 1631, 1663
Asp700I GAANNNNTTC 1 cut(s) 129
AspLEI GCGC 2 cut(s) 580, 1444
AspS9I GGNCC 9 cut(s) 92, 207, 1034, 1085, 1136, 1238, 1391, 1595, 1748
AsuHPI GGTGA 1 cut(s) 206
AvaI CYCGRG 1 cut(s) 981
AvaII GGWCC 4 cut(s) 92, 207, 1034, 1595
BaeGI GKGCMC 1 cut(s) 1213
BamHI GGATCC 3 cut(s) 1117, 1270, 1372
BanI GGYRCC 1 cut(s) 1339
BarI GAAGNNNNNNTAC 2 cut(s) 1626, 1658
Bbv12I GWGCWC 1 cut(s) 1213
BbvCI CCTCAGC 2 cut(s) 1164, 1801
BbvI GCAGC 8 cut(s) 211, 399, 587, 1113, 1266, 1432, 1725, 1776
BccI CCATC 6 cut(s) 80, 402, 454, 737, 739, 1772
BcgI CGANNNNNNTGC 2 cut(s) 350, 384
BciT130I CCWGG 3 cut(s) 159, 213, 1492
BciVI GTATCC 1 cut(s) 1519
BclI TGATCA 1 cut(s) 328
BcoDI GTCTC 1 cut(s) 730
BfaI CTAG 4 cut(s) 1082, 1235, 1439, 1469
BfmI CTRYAG 5 cut(s) 168, 601, 912, 1005, 1520
BfoI RGCGCY 2 cut(s) 581, 1445
BfrI CTTAAG 1 cut(s) 518
BfuAI ACCTGC 1 cut(s) 1168
BfuI GTATCC 1 cut(s) 1519
BisI GCNGC 8 cut(s) 225, 413, 601, 1102, 1255, 1421, 1714, 1765
BlpI GCTNAGC 1 cut(s) 585
BlsI GCNGC 8 cut(s) 226, 414, 602, 1103, 1256, 1422, 1715, 1766
Bme1390I CCNGG 3 cut(s) 159, 213, 1492
Bme18I GGWCC 4 cut(s) 92, 207, 1034, 1595
BmeRI GACNNNNNGTC 1 cut(s) 187
BmeT110I CYCGRG 1 cut(s) 981
BmgBI CACGTC 1 cut(s) 189
BmgT120I GGNCC 9 cut(s) 92, 207, 1034, 1085, 1136, 1238, 1391, 1595, 1748
BmiI GGNNCC 7 cut(s) 209, 1119, 1272, 1341, 1374, 1545, 1749
BmrFI CCNGG 3 cut(s) 159, 213, 1492
BmrI ACTGGG 1 cut(s) 1754
BmsI GCATC 3 cut(s) 304, 962, 1816
BmuI ACTGGG 1 cut(s) 1754
BpmI CTGGAG 1 cut(s) 555
Bpu10I CCTNAGC 2 cut(s) 1164, 1801
Bpu1102I GCTNAGC 1 cut(s) 585
BpuEI CTTGAG 1 cut(s) 129
BsaHI GRCGYC 1 cut(s) 739
BsaJI CCNNGG 6 cut(s) 157, 211, 1368, 1572, 1623, 1818
BsaWI WCCGGW 1 cut(s) 204
Bsc4I CCNNNNNNNGG 2 cut(s) 217, 1497
Bse1I ACTGG 3 cut(s) 963, 1088, 1749
BseAI TCCGGA 1 cut(s) 204
BseBI CCWGG 3 cut(s) 159, 213, 1492
BseDI CCNNGG 6 cut(s) 157, 211, 1368, 1572, 1623, 1818
BseLI CCNNNNNNNGG 2 cut(s) 217, 1497
BseMII CTCAG 6 cut(s) 275, 576, 1155, 1292, 1394, 1815
BseNI ACTGG 3 cut(s) 963, 1088, 1749
BseSI GKGCMC 1 cut(s) 1213
BseXI GCAGC 8 cut(s) 211, 399, 587, 1113, 1266, 1432, 1725, 1776
BshFI GGCC 5 cut(s) 1087, 1138, 1240, 1393, 1750
BshNI GGYRCC 1 cut(s) 1339
BsiHKAI GWGCWC 1 cut(s) 1213
BsiHKCI CYCGRG 1 cut(s) 981
BsiSI CCGG 1 cut(s) 205
BslFI GGGAC 1 cut(s) 1303
BslI CCNNNNNNNGG 2 cut(s) 217, 1497
BsmAI GTCTC 1 cut(s) 730
BsmBI CGTCTC 1 cut(s) 730
BsmFI GGGAC 1 cut(s) 1303
BsnI GGCC 5 cut(s) 1087, 1138, 1240, 1393, 1750
BsoBI CYCGRG 1 cut(s) 981
Bsp1286I GDGCHC 1 cut(s) 1213
Bsp13I TCCGGA 1 cut(s) 204
Bsp1720I GCTNAGC 1 cut(s) 585
BspACI CCGC 3 cut(s) 78, 974, 1418
BspANI GGCC 5 cut(s) 1087, 1138, 1240, 1393, 1750
BspCNI CTCAG 6 cut(s) 274, 577, 1156, 1293, 1395, 1814
BspEI TCCGGA 1 cut(s) 204
BspHI TCATGA 2 cut(s) 732, 1477
BspLI GGNNCC 7 cut(s) 209, 1119, 1272, 1341, 1374, 1545, 1749
BspMAI CTGCAG 4 cut(s) 605, 916, 1009, 1524
BspMI ACCTGC 1 cut(s) 1168
BspT107I GGYRCC 1 cut(s) 1339
BspTI CTTAAG 1 cut(s) 518
BsrI ACTGG 3 cut(s) 963, 1088, 1749
BssECI CCNNGG 6 cut(s) 157, 211, 1368, 1572, 1623, 1818
BssNI GRCGYC 1 cut(s) 739
BssT1I CCWWGG 4 cut(s) 1368, 1572, 1623, 1818
Bst2UI CCWGG 3 cut(s) 159, 213, 1492
Bst4CI ACNGT 3 cut(s) 646, 766, 1647
Bst6I CTCTTC 1 cut(s) 1017
BstACI GRCGYC 1 cut(s) 739
BstAFI CTTAAG 1 cut(s) 518
BstC8I GCNNGC 6 cut(s) 39, 582, 591, 1055, 1338, 1463
BstDEI CTNAG 7 cut(s) 261, 416, 585, 1164, 1301, 1403, 1801
BstH2I RGCGCY 2 cut(s) 581, 1445
BstHHI GCGC 2 cut(s) 580, 1444
BstMAI GTCTC 1 cut(s) 730
BstMWI GCNNNNNNNGC 2 cut(s) 586, 590
BstNI CCWGG 3 cut(s) 159, 213, 1492
BstNSI RCATGY 2 cut(s) 593, 1427
BstSCI CCNGG 3 cut(s) 157, 211, 1490
BstSFI CTRYAG 5 cut(s) 168, 601, 912, 1005, 1520
BstSLI GKGCMC 1 cut(s) 1213
BstV1I GCAGC 8 cut(s) 211, 399, 587, 1113, 1266, 1432, 1725, 1776
BstX2I RGATCY 6 cut(s) 919, 1117, 1168, 1270, 1372, 1729
BstYI RGATCY 6 cut(s) 919, 1117, 1168, 1270, 1372, 1729
BsuI GTATCC 1 cut(s) 1519
BsuRI GGCC 5 cut(s) 1087, 1138, 1240, 1393, 1750
BtrI CACGTC 1 cut(s) 189
BtsI GCAGTG 2 cut(s) 547, 810
BtsIMutI CAGTG 3 cut(s) 547, 810, 1095
BveI ACCTGC 1 cut(s) 1168
Cac8I GCNNGC 6 cut(s) 39, 582, 591, 1055, 1338, 1463
CaiI CAGNNNCTG 2 cut(s) 290, 1808
CciI TCATGA 2 cut(s) 732, 1477
CfoI GCGC 2 cut(s) 580, 1444
Cfr13I GGNCC 9 cut(s) 92, 207, 1034, 1085, 1136, 1238, 1391, 1595, 1748
CseI GACGC 2 cut(s) 747, 897
Csp6I GTAC 4 cut(s) 100, 639, 824, 1643
CviAII CATG 8 cut(s) 556, 590, 664, 674, 705, 733, 1424, 1478
CviQI GTAC 4 cut(s) 100, 639, 824, 1643
DdeI CTNAG 7 cut(s) 261, 416, 585, 1164, 1301, 1403, 1801
DriI GACNNNNNGTC 1 cut(s) 187
Eam1104I CTCTTC 1 cut(s) 1017
Eam1105I GACNNNNNGTC 1 cut(s) 187
EarI CTCTTC 1 cut(s) 1017
Eco130I CCWWGG 4 cut(s) 1368, 1572, 1623, 1818
Eco32I GATATC 3 cut(s) 199, 232, 343
Eco47I GGWCC 4 cut(s) 92, 207, 1034, 1595
Eco47III AGCGCT 1 cut(s) 579
Eco57I CTGAAG 2 cut(s) 1143, 1551
Eco88I CYCGRG 1 cut(s) 981
EcoO109I RGGNCCY 1 cut(s) 92
EcoRII CCWGG 3 cut(s) 157, 211, 1490
EcoRV GATATC 3 cut(s) 199, 232, 343
EcoT14I CCWWGG 4 cut(s) 1368, 1572, 1623, 1818
ErhI CCWWGG 4 cut(s) 1368, 1572, 1623, 1818
Esp3I CGTCTC 1 cut(s) 730
FaeI CATG 8 cut(s) 559, 593, 667, 677, 708, 736, 1427, 1481
FalI AAGNNNNNCTT 2 cut(s) 1014, 1046
FaqI GGGAC 1 cut(s) 1303
FatI CATG 8 cut(s) 555, 589, 663, 673, 704, 732, 1423, 1477
FauI CCCGC 2 cut(s) 71, 1425
FbaI TGATCA 1 cut(s) 328
FblI GTMKAC 2 cut(s) 20, 528
Fnu4HI GCNGC 8 cut(s) 225, 413, 601, 1102, 1255, 1421, 1714, 1765
Fsp4HI GCNGC 8 cut(s) 225, 413, 601, 1102, 1255, 1421, 1714, 1765
FspBI CTAG 4 cut(s) 1082, 1235, 1439, 1469
GlaI GCGC 2 cut(s) 579, 1443
GluI GCNGC 8 cut(s) 225, 413, 601, 1102, 1255, 1421, 1714, 1765
GsuI CTGGAG 1 cut(s) 555
HaeII RGCGCY 2 cut(s) 581, 1445
HaeIII GGCC 5 cut(s) 1087, 1138, 1240, 1393, 1750
HapII CCGG 1 cut(s) 205
HgaI GACGC 2 cut(s) 747, 897
HhaI GCGC 2 cut(s) 580, 1444
Hin1I GRCGYC 1 cut(s) 739
Hin1II CATG 8 cut(s) 559, 593, 667, 677, 708, 736, 1427, 1481
Hin6I GCGC 2 cut(s) 578, 1442
HinP1I GCGC 2 cut(s) 578, 1442
HincII GTYRAC 3 cut(s) 181, 529, 999
HindII GTYRAC 3 cut(s) 181, 529, 999
HindIII AAGCTT 1 cut(s) 779
HinfI GANTC 6 cut(s) 287, 511, 677, 1073, 1514, 1565
HpaI GTTAAC 1 cut(s) 999
HpaII CCGG 1 cut(s) 205
HphI GGTGA 1 cut(s) 206
Hpy188I TCNGA 6 cut(s) 236, 264, 328, 352, 856, 1810
HpyAV CCTTC 7 cut(s) 68, 76, 105, 626, 1276, 1669, 1720
HpyCH4III ACNGT 3 cut(s) 646, 766, 1647
HpyCH4IV ACGT 3 cut(s) 48, 188, 1692
HpyF10VI GCNNNNNNNGC 2 cut(s) 586, 590
HpyF3I CTNAG 7 cut(s) 261, 416, 585, 1164, 1301, 1403, 1801
HpySE526I ACGT 3 cut(s) 48, 188, 1692
Hsp92I GRCGYC 1 cut(s) 739
Hsp92II CATG 8 cut(s) 559, 593, 667, 677, 708, 736, 1427, 1481
HspAI GCGC 2 cut(s) 578, 1442
Kpn2I TCCGGA 1 cut(s) 204
Ksp22I TGATCA 1 cut(s) 328
KspAI GTTAAC 1 cut(s) 999
LmnI GCTCC 3 cut(s) 725, 937, 1543
Lsp1109I GCAGC 8 cut(s) 211, 399, 587, 1113, 1266, 1432, 1725, 1776
LweI GCATC 3 cut(s) 304, 962, 1816
MaeI CTAG 4 cut(s) 1082, 1235, 1439, 1469
MaeII ACGT 3 cut(s) 48, 188, 1692
MaeIII GTNAC 4 cut(s) 44, 659, 1045, 1147
MboII GAAGA 7 cut(s) 193, 314, 443, 878, 948, 1034, 1442
MflI RGATCY 6 cut(s) 919, 1117, 1168, 1270, 1372, 1729
MhlI GDGCHC 1 cut(s) 1213
MluCI AATT 8 cut(s) 14, 125, 274, 465, 681, 699, 968, 1181
MlyI GAGTC 1 cut(s) 505
MroI TCCGGA 1 cut(s) 204
MroXI GAANNNNTTC 1 cut(s) 129
MseI TTAA 5 cut(s) 468, 519, 534, 564, 998
MslI CAYNNNNRTG 3 cut(s) 336, 855, 1776
MspCI CTTAAG 1 cut(s) 518
MspI CCGG 1 cut(s) 205
MspR9I CCNGG 3 cut(s) 159, 213, 1492
MvaI CCWGG 3 cut(s) 159, 213, 1492
MwoI GCNNNNNNNGC 2 cut(s) 586, 590
NlaIII CATG 8 cut(s) 559, 593, 667, 677, 708, 736, 1427, 1481
NlaIV GGNNCC 7 cut(s) 209, 1119, 1272, 1341, 1374, 1545, 1749
NmuCI GTSAC 3 cut(s) 659, 1045, 1147
NspI RCATGY 2 cut(s) 593, 1427
PaeI GCATGC 1 cut(s) 593
PaeR7I CTCGAG 1 cut(s) 981
PagI TCATGA 2 cut(s) 732, 1477
PdmI GAANNNNTTC 1 cut(s) 129
PfeI GAWTC 5 cut(s) 287, 677, 1073, 1514, 1565
PkrI GCNGC 8 cut(s) 226, 414, 602, 1103, 1256, 1422, 1715, 1766
PleI GAGTC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 505
PpuMI RGGWCCY 1 cut(s) 92
Psp5II RGGWCCY 1 cut(s) 92
Psp6I CCWGG 3 cut(s) 157, 211, 1490
PspGI CCWGG 3 cut(s) 157, 211, 1490
PspN4I GGNNCC 7 cut(s) 209, 1119, 1272, 1341, 1374, 1545, 1749
PspPI GGNCC 9 cut(s) 92, 207, 1034, 1085, 1136, 1238, 1391, 1595, 1748
PspPPI RGGWCCY 1 cut(s) 92
PstI CTGCAG 4 cut(s) 605, 916, 1009, 1524
PstNI CAGNNNCTG 2 cut(s) 290, 1808
PsuI RGATCY 6 cut(s) 919, 1117, 1168, 1270, 1372, 1729
RsaI GTAC 4 cut(s) 101, 640, 825, 1644
RsaNI GTAC 4 cut(s) 100, 639, 824, 1643
RseI CAYNNNNRTG 3 cut(s) 336, 855, 1776
SalI GTCGAC 1 cut(s) 527
SaqAI TTAA 5 cut(s) 468, 519, 534, 564, 998
SatI GCNGC 8 cut(s) 225, 413, 601, 1102, 1255, 1421, 1714, 1765
Sau96I GGNCC 9 cut(s) 92, 207, 1034, 1085, 1136, 1238, 1391, 1595, 1748
SbfI CCTGCAGG 1 cut(s) 1524
SchI GAGTC 1 cut(s) 505
ScrFI CCNGG 3 cut(s) 159, 213, 1492
SdaI CCTGCAGG 1 cut(s) 1524
SduI GDGCHC 1 cut(s) 1213
SfaNI GCATC 3 cut(s) 304, 962, 1816
SfcI CTRYAG 5 cut(s) 168, 601, 912, 1005, 1520
Sfr274I CTCGAG 1 cut(s) 981
SinI GGWCC 4 cut(s) 92, 207, 1034, 1595
SlaI CTCGAG 1 cut(s) 981
SmiMI CAYNNNNRTG 3 cut(s) 336, 855, 1776
SmlI CTYRAG 3 cut(s) 144, 518, 981
SmoI CTYRAG 3 cut(s) 144, 518, 981
SphI GCATGC 1 cut(s) 593
Sse8387I CCTGCAGG 1 cut(s) 1524
Sse9I AATT 8 cut(s) 14, 125, 274, 465, 681, 699, 968, 1181
SsiI CCGC 3 cut(s) 78, 974, 1418
SspI AATATT 1 cut(s) 1131
SspMI CTAG 4 cut(s) 1082, 1235, 1439, 1469
StyD4I CCNGG 3 cut(s) 157, 211, 1490
StyI CCWWGG 4 cut(s) 1368, 1572, 1623, 1818
TaaI ACNGT 3 cut(s) 646, 766, 1647
TaiI ACGT 3 cut(s) 51, 191, 1695
TaqI TCGA 5 cut(s) 360, 528, 982, 1673, 1734
TasI AATT 8 cut(s) 14, 125, 274, 465, 681, 699, 968, 1181
TatI WGTACW 1 cut(s) 638
TfiI GAWTC 5 cut(s) 287, 677, 1073, 1514, 1565
Tru1I TTAA 5 cut(s) 468, 519, 534, 564, 998
Tru9I TTAA 5 cut(s) 468, 519, 534, 564, 998
TscAI CASTG 3 cut(s) 554, 810, 1095
TseFI GTSAC 3 cut(s) 659, 1045, 1147
TseI GCWGC 8 cut(s) 224, 412, 600, 1101, 1254, 1420, 1713, 1764
Tsp45I GTSAC 3 cut(s) 659, 1045, 1147
TspGWI ACGGA 3 cut(s) 324, 1157, 1608
TspRI CASTG 3 cut(s) 554, 810, 1095
Vha464I CTTAAG 1 cut(s) 518
VneI GTGCAC 1 cut(s) 1209
VpaK11BI GGWCC 4 cut(s) 92, 207, 1034, 1595
XapI RAATTY 2 cut(s) 274, 1181
XceI RCATGY 2 cut(s) 593, 1427
XhoI CTCGAG 1 cut(s) 981
XmiI GTMKAC 2 cut(s) 20, 528
XmnI GAANNNNTTC 1 cut(s) 129
XspI CTAG 4 cut(s) 1082, 1235, 1439, 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.