AT3G14890

Polynucleotide kinase 3 phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0005030
Physical Location & Seq
Forward (+)
5008676 .. 5013265
4590 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G14890.1

Sequence Viewer

Length: 2085 bp
ATGATTACAGTAGCCCCCTTCGTGTCTCTTCGTTTCCAGTTCCCTCTTTATATAATAAATCGCTCCACTCTCTTTTTCCGAGAAAGAACACAGTATCTCGTCTACAACACCTGTCACATTTTGAGAACAACGGCGAAAACAATGCCGGTGGTTGCTGAGTACGCGAAGTCGAATCGGTCGTCGTGTAGGTCATGTTCGAACAAGATAGCTGTGAAATCGCTTAGGTTAGGGTTGATTAGCAAAGGACGTGGCGGGGTTGACATGACCAGGTGGCACCATTTCGATTGTTTTCCGACTGATTCTGAGTCGATTGCTTCCGTTGATGATATTCAAGGCTTATCCGCTTTAGAGAAAGAAGATCAAGATGCTTTGACGAAATTGGTGGAACAATGTGGTAAAGTACCTGCAAAAAAACCTGATGAGAAGAAGGGGAAGGCTAAAAAGCATATAATGGGGCCGAAGGGGCTTACGAAGGCGGCAACATCTTCAAAAGTTATTGCTGATAATGCGAAATCGAGCAGATCATCATGCAACAGGTGTTCTCAGACAATCGTTTCAAAGGATCTGAGAGTGGGGCTGGTTACTGAAGACTCCAGGGGATTTGATATAACAAGATGGCATCACTTGGGTTGTTTTCCCATTGATTTTCATCCAATTGATTCTGTGGAGGACATTGGTGGATATTCATCGCTTGAGAAAGGTGACCAGATGGAATTAAAGTATTTGGCCGAAGTAAACAAGAAGGATAAAACTTTGATAGATGATGTCCAGAAGATGGATGAAGGTGATGATGAAGCTATAGCTGATAATGAGCTAACGGAGGAGACCAAAAAAGGAAAACATTCTCCTGTTGCAAAATTGGTGGAACAACCTGGCGAGCCTGCAAAAGAAGATGAGGATGAAGAGAGTAAAAAGCCTGCATCAGATGAAATAAGTGAGCAGAAGACTAAGGATGTGAAAAATTCTCCTGATTCTTCAAAAGTTATTTCTGAGTATGCGAAATCGAGCAGATCAACATGCAAGAAGTGCTCTCAGACTATCGCTGCAAAGGAACTGAGGTTGGGGCTAGTGACCAGAAACTTCCGTGGCTTTGATATGAAACAATGGCATCACTTGGGTTGTTTTCCTGTCGACTCTGATCCAATTGTTTCGGTAGAGGACATTGGTGGATTTTCAGAACTGCAGAGTGGTGATCAGGATGCATTAAAGGAATTGGTCCAACAATGCGGGAAGCAGACTTTGGTAGATAAGATGGATGAAGATAATGATGACACTGAAGCTAAAATTAAGCTAACTGAGGAGACAAACAAAAGAAAACATTCTGAGGTTGGGGAGATGGTGGAAGAAGATGAATCGCTAACTAAAGCGAAACAACAGATGGCTAAAACACATAAGGTGAACATGAGTGAGTCAACTTCTCAGGTCGAGGTTGAAGCAGAAATCACTCTTTCAGCGTCTGATGTGAAGGATAAGTACAGGGATGCCAATCTATTACCAAAATGGAAAGCTTTTGAGACAGTTATATTCCTTGAGCGGGATGATGGTCTTAATGATTCAGAAAAAATAGCTGCATTTGACTTTGATGGATGCCTTGCAAAAACATCTGTGAAAATAGTAGGGGCAGATGCATGGTCCCTAATGTATCCTTCCATTCCTGAGAAACTGCAAAGTCTGCACGATCAAGGCTATAAGCTGGTCATTTTCACAAATGAATCCAACATTGATCGATGGAAGAACAAGCGGCAAGCTGCTGTAGATTCGAAAATTGGACGGCTCAACAGTTTTATCGAGCGCGTGAAGGTCCCCATTCAGGTGTTTATAGCCTGTGGAGTCTCAAGTTCTGGTGGTAAAGGTGGTAAAGATGACCTTTACCGCAAACCCAAGGCTGGAATGTGGCAACTCATGAAGAAGCATTTTAACTCTGGAATTGCAATTGATATGGATAAATCCTTCTACGTTGGGGATGCAGCTGGAAGAAAAATGGATCACAGCGACGCTGACATCAAATTTGCACAGGCGAGTGGGCTAAAGTTTTTTACCCCGGAGGAATACTTTATCCCCTCAAGTACATCGCCAGGGACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009117 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010638 GO:0010835 GO:0010836 GO:0016301 GO:0016310 GO:0016311 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0016791 GO:0019205 GO:0019219 GO:0019222 GO:0019637 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032268 GO:0032269 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0042578 GO:0042769 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045935 GO:0046403 GO:0046404 GO:0046483 GO:0046939 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051338 GO:0051347 GO:0051606 GO:0051716 GO:0051731 GO:0051733 GO:0051734 GO:0051972 GO:0051973 GO:0055086 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0098501 GO:0098502 GO:0098503 GO:0098504 GO:0098506 GO:0098518 GO:1901360 GO:1901363 GO:1904353 GO:1904355 GO:1904356 GO:1904358 GO:2000112 GO:2000278 GO:2000573 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PNK3P zf-PARP

Protein Analysis

694

Amino Acids

77.39

Weight (kDa)

6.18

Isoelectric Point (pI)

49.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-PARP PF00645 53 - 127 1.3e-16 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
zf-PARP PF00645 169 - 240 6.4e-12 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
zf-PARP PF00645 331 - 405 2.8e-16 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
PNK3P PF08645 521 - 685 1.7e-49 Polynucleotide kinase 3 phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 412
AccB1I GGYRCC 1 cut(s) 273
AccB7I CCANNNNNTGG 1 cut(s) 775
AccBSI CCGCTC 1 cut(s) 1534
AccI GTMKAC 2 cut(s) 102, 1131
AccII CGCG 2 cut(s) 164, 1794
AciI CCGC 7 cut(s) 252, 342, 476, 1227, 1534, 1741, 1873
AclWI GGATC 3 cut(s) 570, 1133, 1992
AcoI YGGCCR 1 cut(s) 726
AcsI RAATTY 2 cut(s) 961, 2006
AcuI CTGAAG 2 cut(s) 606, 1296
AfaI GTAC 4 cut(s) 161, 402, 1475, 2068
AfiI CCNNNNNNNGG 4 cut(s) 775, 1534, 1810, 1886
AgsI TTSAA 5 cut(s) 332, 489, 558, 978, 1433
AjiI CACGTC 1 cut(s) 248
AjnI CCWGG 4 cut(s) 266, 593, 871, 2074
AjuI GAANNNNNNNTTGG 2 cut(s) 1223, 1255
Alw21I GWGCWC 1 cut(s) 1031
Alw26I GTCTC 5 cut(s) 30, 818, 1295, 1508, 1837
AlwI GGATC 3 cut(s) 570, 1133, 1992
AlwNI CAGNNNCTG 1 cut(s) 1457
AoxI GGCC 2 cut(s) 455, 726
ApeKI GCWGC 4 cut(s) 1043, 1568, 1748, 1967
ApoI RAATTY 2 cut(s) 961, 2006
ArsI GACNNNNNNTTYG 4 cut(s) 164, 196, 1991, 2023
Asp700I GAANNNNTTC 2 cut(s) 841, 1318
AspLEI GCGC 1 cut(s) 1794
AspS9I GGNCC 4 cut(s) 455, 1216, 1632, 1801
AsuC2I CCSGG 1 cut(s) 2042
AsuHPI GGTGA 4 cut(s) 713, 797, 1202, 1408
AsuII TTCGAA 2 cut(s) 197, 1760
AvaII GGWCC 3 cut(s) 1216, 1632, 1801
BanI GGYRCC 1 cut(s) 273
BarI GAAGNNNNNNTAC 2 cut(s) 1457, 1489
BbsI GAAGAC 2 cut(s) 594, 950
Bbv12I GWGCWC 1 cut(s) 1031
BbvI GCAGC 4 cut(s) 1030, 1555, 1735, 1979
BccI CCATC 9 cut(s) 609, 703, 769, 1246, 1330, 1372, 1535, 1577, 1722
BceAI ACGGC 2 cut(s) 147, 1787
BcgI CGANNNNNNTGC 2 cut(s) 124, 158
BciT130I CCWGG 4 cut(s) 268, 595, 873, 2076
BciVI GTATCC 1 cut(s) 1653
BclI TGATCA 1 cut(s) 1192
BcnI CCSGG 1 cut(s) 2042
BcoDI GTCTC 5 cut(s) 30, 818, 1295, 1508, 1837
BfaI CTAG 1 cut(s) 1067
BfmI CTRYAG 3 cut(s) 798, 1181, 1752
BfuAI ACCTGC 1 cut(s) 412
BfuI GTATCC 1 cut(s) 1653
BglI GCCNNNNNGGC 1 cut(s) 463
BisI GCNGC 6 cut(s) 477, 1044, 1569, 1742, 1749, 1968
BlsI GCNGC 6 cut(s) 478, 1045, 1570, 1743, 1750, 1969
Bme1390I CCNGG 5 cut(s) 268, 595, 873, 2042, 2076
Bme18I GGWCC 3 cut(s) 1216, 1632, 1801
BmgBI CACGTC 1 cut(s) 248
BmgT120I GGNCC 4 cut(s) 455, 1216, 1632, 1801
BmiI GGNNCC 4 cut(s) 275, 456, 1634, 1803
BmrFI CCNGG 5 cut(s) 268, 595, 873, 2042, 2076
BmsI GCATC 9 cut(s) 355, 628, 929, 1117, 1189, 1471, 1577, 1615, 1954
BpiI GAAGAC 2 cut(s) 594, 950
BpmI CTGGAG 1 cut(s) 577
Bpu10I CCTNAGC 1 cut(s) 221
Bpu14I TTCGAA 2 cut(s) 197, 1760
BpuEI CTTGAG 4 cut(s) 713, 1550, 1819, 2047
BpuMI CCSGG 1 cut(s) 2042
Bsa29I ATCGAT 1 cut(s) 1726
BsaBI GATNNNNATC 3 cut(s) 648, 685, 1485
BsaI GGTCTC 1 cut(s) 818
BsaJI CCNNGG 5 cut(s) 594, 1084, 1881, 2040, 2075
Bsc4I CCNNNNNNNGG 4 cut(s) 775, 1534, 1810, 1886
Bse118I RCCGGY 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 37
Bse8I GATNNNNATC 3 cut(s) 648, 685, 1485
BseBI CCWGG 4 cut(s) 268, 595, 873, 2076
BseCI ATCGAT 1 cut(s) 1726
BseDI CCNNGG 5 cut(s) 594, 1084, 1881, 2040, 2075
BseJI GATNNNNATC 3 cut(s) 648, 685, 1485
BseLI CCNNNNNNNGG 4 cut(s) 775, 1534, 1810, 1886
BseNI ACTGG 1 cut(s) 37
BseRI GAGGAG 2 cut(s) 836, 1313
BseXI GCAGC 4 cut(s) 1030, 1555, 1735, 1979
BsgI GTGCAG 1 cut(s) 1658
Bsh1236I CGCG 2 cut(s) 164, 1794
Bsh1285I CGRYCG 1 cut(s) 179
BshFI GGCC 2 cut(s) 457, 728
BshNI GGYRCC 1 cut(s) 273
BshVI ATCGAT 1 cut(s) 1726
BsiEI CGRYCG 1 cut(s) 179
BsiHKAI GWGCWC 1 cut(s) 1031
BsiSI CCGG 2 cut(s) 146, 2042
BslFI GGGAC 2 cut(s) 1618, 1787
BslI CCNNNNNNNGG 4 cut(s) 775, 1534, 1810, 1886
BsmAI GTCTC 5 cut(s) 30, 818, 1295, 1508, 1837
BsmFI GGGAC 2 cut(s) 1618, 1787
BsnI GGCC 2 cut(s) 457, 728
Bso31I GGTCTC 1 cut(s) 818
Bsp119I TTCGAA 2 cut(s) 197, 1760
Bsp1286I GDGCHC 1 cut(s) 1031
Bsp143I GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
BspACI CCGC 7 cut(s) 252, 342, 476, 1227, 1534, 1741, 1873
BspANI GGCC 2 cut(s) 457, 728
BspDI ATCGAT 1 cut(s) 1726
BspFNI CGCG 2 cut(s) 164, 1794
BspHI TCATGA 1 cut(s) 1902
BspLI GGNNCC 4 cut(s) 275, 456, 1634, 1803
BspMAI CTGCAG 1 cut(s) 1185
BspMI ACCTGC 1 cut(s) 412
BspPI GGATC 3 cut(s) 570, 1133, 1992
BspT104I TTCGAA 2 cut(s) 197, 1760
BspT107I GGYRCC 1 cut(s) 273
BspTNI GGTCTC 1 cut(s) 818
BsrBI CCGCTC 1 cut(s) 1534
BsrFI RCCGGY 1 cut(s) 145
BsrI ACTGG 1 cut(s) 37
BssAI RCCGGY 1 cut(s) 145
BssECI CCNNGG 5 cut(s) 594, 1084, 1881, 2040, 2075
BssMI GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
BssT1I CCWWGG 1 cut(s) 1881
Bst2UI CCWGG 4 cut(s) 268, 595, 873, 2076
Bst4CI ACNGT 4 cut(s) 10, 93, 1519, 1781
Bst6I CTCTTC 2 cut(s) 33, 897
BstAPI GCANNNNNTGC 2 cut(s) 1026, 1672
BstBI TTCGAA 2 cut(s) 197, 1760
BstC8I GCNNGC 4 cut(s) 878, 882, 918, 1746
BstDSI CCRYGG 1 cut(s) 1084
BstEII GGTNACC 1 cut(s) 701
BstFNI CGCG 2 cut(s) 164, 1794
BstHHI GCGC 1 cut(s) 1794
BstKTI GATC 9 cut(s) 361, 524, 565, 1013, 1141, 1195, 1681, 1726, 1987
BstMAI GTCTC 5 cut(s) 30, 818, 1295, 1508, 1837
BstMBI GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
BstMCI CGRYCG 1 cut(s) 179
BstMWI GCNNNNNNNGC 5 cut(s) 161, 463, 506, 1026, 1672
BstNI CCWGG 4 cut(s) 268, 595, 873, 2076
BstNSI RCATGY 1 cut(s) 1020
BstPI GGTNACC 1 cut(s) 701
BstSCI CCNGG 5 cut(s) 266, 593, 871, 2040, 2074
BstSFI CTRYAG 3 cut(s) 798, 1181, 1752
BstUI CGCG 2 cut(s) 164, 1794
BstV1I GCAGC 4 cut(s) 1030, 1555, 1735, 1979
BstV2I GAAGAC 2 cut(s) 594, 950
BstX2I RGATCY 1 cut(s) 562
BstYI RGATCY 1 cut(s) 562
Bsu15I ATCGAT 1 cut(s) 1726
BsuI GTATCC 1 cut(s) 1653
BsuRI GGCC 2 cut(s) 457, 728
BsuTUI ATCGAT 1 cut(s) 1726
BtgI CCRYGG 1 cut(s) 1084
BtgZI GCGATG 2 cut(s) 672, 2055
BtrI CACGTC 1 cut(s) 248
BtsIMutI CAGTG 1 cut(s) 1272
BveI ACCTGC 1 cut(s) 412
Cac8I GCNNGC 4 cut(s) 878, 882, 918, 1746
CaiI CAGNNNCTG 1 cut(s) 1457
CciI TCATGA 1 cut(s) 1902
CfoI GCGC 1 cut(s) 1794
Cfr10I RCCGGY 1 cut(s) 145
Cfr13I GGNCC 4 cut(s) 455, 1216, 1632, 1801
ClaI ATCGAT 1 cut(s) 1726
CseI GACGC 2 cut(s) 1443, 2003
CsiI ACCWGGT 1 cut(s) 266
Csp6I GTAC 4 cut(s) 160, 401, 1474, 2067
CspCI CAANNNNNGTGG 6 cut(s) 129, 164, 229, 264, 843, 878
CviAII CATG 7 cut(s) 192, 262, 528, 1017, 1402, 1629, 1903
CviQI GTAC 4 cut(s) 160, 401, 1474, 2067
DpnI GATC 9 cut(s) 360, 523, 564, 1012, 1140, 1194, 1680, 1725, 1986
DpnII GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
EaeI YGGCCR 1 cut(s) 726
Eam1104I CTCTTC 2 cut(s) 33, 897
EarI CTCTTC 2 cut(s) 33, 897
Eco130I CCWWGG 1 cut(s) 1881
Eco31I GGTCTC 1 cut(s) 818
Eco47I GGWCC 3 cut(s) 1216, 1632, 1801
Eco57I CTGAAG 2 cut(s) 606, 1296
Eco91I GGTNACC 1 cut(s) 701
EcoO109I RGGNCCY 1 cut(s) 1801
EcoO65I GGTNACC 1 cut(s) 701
EcoRII CCWGG 4 cut(s) 266, 593, 871, 2074
EcoT14I CCWWGG 1 cut(s) 1881
EcoT22I ATGCAT 2 cut(s) 1204, 1630
ErhI CCWWGG 1 cut(s) 1881
FaeI CATG 7 cut(s) 195, 265, 531, 1020, 1405, 1632, 1906
FalI AAGNNNNNCTT 2 cut(s) 1851, 1883
FaqI GGGAC 2 cut(s) 1618, 1787
FatI CATG 7 cut(s) 191, 261, 527, 1016, 1401, 1628, 1902
FauI CCCGC 3 cut(s) 245, 1220, 1527
FbaI TGATCA 1 cut(s) 1192
FblI GTMKAC 2 cut(s) 102, 1131
Fnu4HI GCNGC 6 cut(s) 477, 1044, 1569, 1742, 1749, 1968
Fsp4HI GCNGC 6 cut(s) 477, 1044, 1569, 1742, 1749, 1968
FspBI CTAG 1 cut(s) 1067
GlaI GCGC 1 cut(s) 1793
GluI GCNGC 6 cut(s) 477, 1044, 1569, 1742, 1749, 1968
GsuI CTGGAG 1 cut(s) 577
HaeIII GGCC 2 cut(s) 457, 728
HapII CCGG 2 cut(s) 146, 2042
HgaI GACGC 2 cut(s) 1443, 2003
HhaI GCGC 1 cut(s) 1794
Hin1II CATG 7 cut(s) 195, 265, 531, 1020, 1405, 1632, 1906
Hin6I GCGC 1 cut(s) 1792
HinP1I GCGC 1 cut(s) 1792
HincII GTYRAC 3 cut(s) 259, 1132, 1413
HindII GTYRAC 3 cut(s) 259, 1132, 1413
HindIII AAGCTT 1 cut(s) 1506
HpaII CCGG 2 cut(s) 146, 2042
HphI GGTGA 4 cut(s) 713, 797, 1202, 1408
Hpy166II GTNNAC 6 cut(s) 103, 259, 736, 1132, 1399, 1413
Hpy188III TCNNGA 7 cut(s) 362, 769, 968, 1196, 1655, 1903, 1923
Hpy8I GTNNAC 6 cut(s) 103, 259, 736, 1132, 1399, 1413
Hpy99I CGWCG 2 cut(s) 184, 1997
HpyCH4III ACNGT 4 cut(s) 10, 93, 1519, 1781
HpyCH4IV ACGT 2 cut(s) 247, 1956
HpyF10VI GCNNNNNNNGC 5 cut(s) 161, 463, 506, 1026, 1672
HpySE526I ACGT 2 cut(s) 247, 1956
Hsp92II CATG 7 cut(s) 195, 265, 531, 1020, 1405, 1632, 1906
HspAI GCGC 1 cut(s) 1792
Ksp22I TGATCA 1 cut(s) 1192
Kzo9I GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
LmnI GCTCC 1 cut(s) 68
Lsp1109I GCAGC 4 cut(s) 1030, 1555, 1735, 1979
LweI GCATC 9 cut(s) 355, 628, 929, 1117, 1189, 1471, 1577, 1615, 1954
MabI ACCWGGT 1 cut(s) 266
MaeI CTAG 1 cut(s) 1067
MaeII ACGT 2 cut(s) 247, 1956
MaeIII GTNAC 4 cut(s) 113, 580, 701, 1069
MalI GATC 9 cut(s) 360, 523, 564, 1012, 1140, 1194, 1680, 1725, 1986
MbiI CCGCTC 1 cut(s) 1534
MboI GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
MfeI CAATTG 3 cut(s) 654, 1143, 1932
MflI RGATCY 1 cut(s) 562
MhlI GDGCHC 1 cut(s) 1031
MlyI GAGTC 5 cut(s) 314, 584, 1127, 1418, 1839
MmeI TCCRAC 3 cut(s) 317, 1243, 1740
Mph1103I ATGCAT 2 cut(s) 1204, 1630
MroXI GAANNNNTTC 2 cut(s) 841, 1318
MseI TTAA 5 cut(s) 716, 1205, 1287, 1548, 1917
MslI CAYNNNNRTG 1 cut(s) 1811
MspA1I CMGCKG 1 cut(s) 1970
MspI CCGG 2 cut(s) 146, 2042
MspR9I CCNGG 5 cut(s) 268, 595, 873, 2042, 2076
MunI CAATTG 3 cut(s) 654, 1143, 1932
MvaI CCWGG 4 cut(s) 268, 595, 873, 2076
MvnI CGCG 2 cut(s) 164, 1794
MwoI GCNNNNNNNGC 5 cut(s) 161, 463, 506, 1026, 1672
NciI CCSGG 1 cut(s) 2042
NdeII GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
NlaIII CATG 7 cut(s) 195, 265, 531, 1020, 1405, 1632, 1906
NlaIV GGNNCC 4 cut(s) 275, 456, 1634, 1803
NmuCI GTSAC 3 cut(s) 113, 701, 1069
NsiI ATGCAT 2 cut(s) 1204, 1630
NspI RCATGY 1 cut(s) 1020
NspV TTCGAA 2 cut(s) 197, 1760
PagI TCATGA 1 cut(s) 1902
PcsI WCGNNNNNNNCGW 1 cut(s) 176
PdmI GAANNNNTTC 2 cut(s) 841, 1318
PfeI GAWTC 8 cut(s) 172, 299, 659, 971, 1352, 1553, 1712, 1757
PflMI CCANNNNNTGG 1 cut(s) 775
PkrI GCNGC 6 cut(s) 478, 1045, 1570, 1743, 1750, 1969
PleI GAGTC 5 cut(s) 313, 584, 1127, 1417, 1838
PpsI GAGTC 5 cut(s) 313, 584, 1127, 1417, 1838
PpuMI RGGWCCY 1 cut(s) 1801
Psp5II RGGWCCY 1 cut(s) 1801
Psp6I CCWGG 4 cut(s) 266, 593, 871, 2074
PspEI GGTNACC 1 cut(s) 701
PspGI CCWGG 4 cut(s) 266, 593, 871, 2074
PspN4I GGNNCC 4 cut(s) 275, 456, 1634, 1803
PspPI GGNCC 4 cut(s) 455, 1216, 1632, 1801
PspPPI RGGWCCY 1 cut(s) 1801
PsrI GAACNNNNNNTAC 2 cut(s) 178, 210
PstI CTGCAG 1 cut(s) 1185
PstNI CAGNNNCTG 1 cut(s) 1457
PsuI RGATCY 1 cut(s) 562
PvuII CAGCTG 1 cut(s) 1970
RsaI GTAC 4 cut(s) 161, 402, 1475, 2068
RsaNI GTAC 4 cut(s) 160, 401, 1474, 2067
RseI CAYNNNNRTG 1 cut(s) 1811
SalI GTCGAC 1 cut(s) 1130
SaqAI TTAA 5 cut(s) 716, 1205, 1287, 1548, 1917
SatI GCNGC 6 cut(s) 477, 1044, 1569, 1742, 1749, 1968
Sau3AI GATC 9 cut(s) 358, 521, 562, 1010, 1138, 1192, 1678, 1723, 1984
Sau96I GGNCC 4 cut(s) 455, 1216, 1632, 1801
SchI GAGTC 5 cut(s) 314, 584, 1127, 1418, 1839
ScrFI CCNGG 5 cut(s) 268, 595, 873, 2042, 2076
SduI GDGCHC 1 cut(s) 1031
SexAI ACCWGGT 1 cut(s) 266
SfaNI GCATC 9 cut(s) 355, 628, 929, 1117, 1189, 1471, 1577, 1615, 1954
SfcI CTRYAG 3 cut(s) 798, 1181, 1752
SfuI TTCGAA 2 cut(s) 197, 1760
SinI GGWCC 3 cut(s) 1216, 1632, 1801
SmiMI CAYNNNNRTG 1 cut(s) 1811
SmlI CTYRAG 4 cut(s) 692, 1529, 1834, 2062
SmoI CTYRAG 4 cut(s) 692, 1529, 1834, 2062
SsiI CCGC 7 cut(s) 252, 342, 476, 1227, 1534, 1741, 1873
SspMI CTAG 1 cut(s) 1067
StyD4I CCNGG 5 cut(s) 266, 593, 871, 2040, 2074
StyI CCWWGG 1 cut(s) 1881
TaaI ACNGT 4 cut(s) 10, 93, 1519, 1781
TaiI ACGT 2 cut(s) 250, 1959
TaqII GACCGA 1 cut(s) 165
TatI WGTACW 2 cut(s) 1473, 2066
TauI GCSGC 2 cut(s) 479, 1744
TfiI GAWTC 8 cut(s) 172, 299, 659, 971, 1352, 1553, 1712, 1757
Tru1I TTAA 5 cut(s) 716, 1205, 1287, 1548, 1917
Tru9I TTAA 5 cut(s) 716, 1205, 1287, 1548, 1917
TscAI CASTG 1 cut(s) 1279
TseFI GTSAC 3 cut(s) 113, 701, 1069
TseI GCWGC 4 cut(s) 1043, 1568, 1748, 1967
Tsp45I GTSAC 3 cut(s) 113, 701, 1069
TspGWI ACGGA 3 cut(s) 307, 833, 1073
TspRI CASTG 1 cut(s) 1279
Van91I CCANNNNNTGG 1 cut(s) 775
VpaK11BI GGWCC 3 cut(s) 1216, 1632, 1801
XapI RAATTY 2 cut(s) 961, 2006
XceI RCATGY 1 cut(s) 1020
XmiI GTMKAC 2 cut(s) 102, 1131
XmnI GAANNNNTTC 2 cut(s) 841, 1318
XspI CTAG 1 cut(s) 1067
Zsp2I ATGCAT 2 cut(s) 1204, 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.