Polynucleotide
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14890 AT3G14890 |
| fragaria_vesca | FvH4_3g18270 FvH4_3g18270 FvH4_3g18270 FvH4_3g18270 FvH4_3g18270 FvH4_3g18270 |
| malus_domestica | MD11G1263900.v1.1 |
| prunus_persica | Prupe.4G164600_v2.0.a1 |
| pyrus_communis | pycom11g23240 |
| rosa_chinensis | RchiOBHm_Chr1g0352751 RchiOBHm_Chr5g0030901 |
| rosa_laevigata | RLG00000033264 |
| rosa_multiflora | Rmu_co8379571.1_g000001 Rmu_co8381907.1_g000001 Rmu_sc0001974.1_g000024 Rmu_sc0007903.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00049370 |
| rosa_rugosa | Rorug05G0121400 |
| rosa_samantha | Rh2AG245900 Rh2DG254200 Rh5AG214500 Rh5AG510900 Rh5BG213500 Rh5CG237400 Rh5DG218000 |
| rosa_wichuraiana | Rw1G007780 Rw4G027950 Rw5G019610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 297 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 175 |
| AccII | CGCG | 5 cut(s) | 188, 272, 274, 276, 458 |
| AciI | CCGC | 4 cut(s) | 130, 276, 458, 1151 |
| AclI | AACGTT | 1 cut(s) | 115 |
| AclWI | GGATC | 1 cut(s) | 1089 |
| AcoI | YGGCCR | 1 cut(s) | 177 |
| AcsI | RAATTY | 2 cut(s) | 1145, 1169 |
| AfaI | GTAC | 3 cut(s) | 185, 451, 620 |
| AfeI | AGCGCT | 1 cut(s) | 872 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 175, 823, 955, 1025, 1026 |
| AgsI | TTSAA | 7 cut(s) | 397, 441, 464, 677, 702, 795, 1057 |
| AjiI | CACGTC | 1 cut(s) | 286 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 477, 509 |
| AluBI | AGCT | 7 cut(s) | 575, 580, 808, 838, 896, 968, 1109 |
| AluI | AGCT | 7 cut(s) | 575, 580, 808, 838, 896, 968, 1109 |
| Alw21I | GWGCWC | 1 cut(s) | 221 |
| Alw26I | GTCTC | 2 cut(s) | 261, 880 |
| AlwI | GGATC | 1 cut(s) | 1089 |
| Ama87I | CYCGRG | 1 cut(s) | 426 |
| Aor51HI | AGCGCT | 1 cut(s) | 872 |
| AoxI | GGCC | 3 cut(s) | 177, 973, 1155 |
| ApeKI | GCWGC | 3 cut(s) | 410, 713, 1106 |
| ApoI | RAATTY | 2 cut(s) | 1145, 1169 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 116, 653 |
| AspLEI | GCGC | 3 cut(s) | 274, 276, 873 |
| AspS9I | GGNCC | 3 cut(s) | 201, 777, 946 |
| AsuC2I | CCSGG | 1 cut(s) | 1026 |
| AsuHPI | GGTGA | 3 cut(s) | 40, 630, 1112 |
| AvaI | CYCGRG | 1 cut(s) | 426 |
| AvaII | GGWCC | 3 cut(s) | 201, 777, 946 |
| BanI | GGYRCC | 1 cut(s) | 297 |
| BbsI | GAAGAC | 2 cut(s) | 147, 1008 |
| Bbv12I | GWGCWC | 1 cut(s) | 221 |
| BbvI | GCAGC | 3 cut(s) | 397, 700, 1118 |
| BccI | CCATC | 6 cut(s) | 17, 60, 560, 680, 722, 821 |
| BceAI | ACGGC | 1 cut(s) | 1142 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 317, 351 |
| BciVI | GTATCC | 2 cut(s) | 137, 798 |
| BclI | TGATCA | 2 cut(s) | 382, 1123 |
| BcnI | CCSGG | 1 cut(s) | 1026 |
| BcoDI | GTCTC | 2 cut(s) | 261, 880 |
| BfoI | RGCGCY | 1 cut(s) | 874 |
| BfuI | GTATCC | 2 cut(s) | 137, 798 |
| BisI | GCNGC | 3 cut(s) | 411, 714, 1107 |
| BlpI | GCTNAGC | 1 cut(s) | 576 |
| BlsI | GCNGC | 3 cut(s) | 412, 715, 1108 |
| Bme1390I | CCNGG | 1 cut(s) | 1026 |
| Bme18I | GGWCC | 3 cut(s) | 201, 777, 946 |
| BmeT110I | CYCGRG | 1 cut(s) | 426 |
| BmgBI | CACGTC | 1 cut(s) | 286 |
| BmgT120I | GGNCC | 3 cut(s) | 201, 777, 946 |
| BmiI | GGNNCC | 5 cut(s) | 299, 325, 536, 779, 948 |
| BmrFI | CCNGG | 1 cut(s) | 1026 |
| BmsI | GCATC | 4 cut(s) | 616, 760, 1093, 1123 |
| BoxI | GACNNNNGTC | 1 cut(s) | 148 |
| BpiI | GAAGAC | 2 cut(s) | 147, 1008 |
| Bpu10I | CCTNAGC | 1 cut(s) | 237 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 576 |
| BpuEI | CTTGAG | 1 cut(s) | 465 |
| BpuMI | CCSGG | 1 cut(s) | 1026 |
| BsaJI | CCNNGG | 4 cut(s) | 138, 414, 976, 1025 |
| BsaWI | WCCGGW | 1 cut(s) | 986 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 84, 114 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 175, 823, 955, 1025, 1026 |
| BseDI | CCNNGG | 4 cut(s) | 138, 414, 976, 1025 |
| BseGI | GGATG | 6 cut(s) | 9, 631, 688, 737, 832, 1035 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 175, 823, 955, 1025, 1026 |
| BseMII | CTCAG | 1 cut(s) | 236 |
| BsePI | GCGCGC | 1 cut(s) | 272 |
| BseXI | GCAGC | 3 cut(s) | 397, 700, 1118 |
| BseYI | CCCAGC | 2 cut(s) | 250, 1109 |
| Bsh1236I | CGCG | 5 cut(s) | 188, 272, 274, 276, 458 |
| Bsh1285I | CGRYCG | 2 cut(s) | 231, 345 |
| BshFI | GGCC | 3 cut(s) | 179, 975, 1157 |
| BshNI | GGYRCC | 1 cut(s) | 297 |
| BsiEI | CGRYCG | 2 cut(s) | 231, 345 |
| BsiHKAI | GWGCWC | 1 cut(s) | 221 |
| BsiHKCI | CYCGRG | 1 cut(s) | 426 |
| BsiSI | CCGG | 2 cut(s) | 987, 1025 |
| BslFI | GGGAC | 4 cut(s) | 156, 763, 932, 1163 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 175, 823, 955, 1025, 1026 |
| BsmAI | GTCTC | 2 cut(s) | 261, 880 |
| BsmBI | CGTCTC | 1 cut(s) | 261 |
| BsmFI | GGGAC | 4 cut(s) | 156, 763, 932, 1163 |
| BsmI | GAATGC | 1 cut(s) | 653 |
| BsnI | GGCC | 3 cut(s) | 179, 975, 1157 |
| BsoBI | CYCGRG | 1 cut(s) | 426 |
| Bsp1286I | GDGCHC | 1 cut(s) | 221 |
| Bsp143I | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 576 |
| BspACI | CCGC | 4 cut(s) | 130, 276, 458, 1151 |
| BspANI | GGCC | 3 cut(s) | 179, 975, 1157 |
| BspCNI | CTCAG | 1 cut(s) | 237 |
| BspFNI | CGCG | 5 cut(s) | 188, 272, 274, 276, 458 |
| BspHI | TCATGA | 1 cut(s) | 496 |
| BspLI | GGNNCC | 5 cut(s) | 299, 325, 536, 779, 948 |
| BspPI | GGATC | 1 cut(s) | 1089 |
| BspT107I | GGYRCC | 1 cut(s) | 297 |
| BssECI | CCNNGG | 4 cut(s) | 138, 414, 976, 1025 |
| BssHII | GCGCGC | 1 cut(s) | 272 |
| BssMI | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| BssT1I | CCWWGG | 1 cut(s) | 976 |
| Bst4CI | ACNGT | 3 cut(s) | 31, 41, 1130 |
| Bst6I | CTCTTC | 2 cut(s) | 191, 519 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 216 |
| BstC8I | GCNNGC | 1 cut(s) | 274 |
| BstDEI | CTNAG | 3 cut(s) | 237, 245, 576 |
| BstDSI | CCRYGG | 2 cut(s) | 138, 414 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 821 |
| BstF5I | GGATG | 6 cut(s) | 9, 631, 688, 737, 832, 1035 |
| BstFNI | CGCG | 5 cut(s) | 188, 272, 274, 276, 458 |
| BstH2I | RGCGCY | 1 cut(s) | 874 |
| BstHHI | GCGC | 3 cut(s) | 274, 276, 873 |
| BstKTI | GATC | 4 cut(s) | 231, 385, 1084, 1126 |
| BstMAI | GTCTC | 2 cut(s) | 261, 880 |
| BstMBI | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| BstMCI | CGRYCG | 2 cut(s) | 231, 345 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 185, 216, 233, 261 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 148 |
| BstSCI | CCNGG | 1 cut(s) | 1024 |
| BstUI | CGCG | 5 cut(s) | 188, 272, 274, 276, 458 |
| BstV1I | GCAGC | 3 cut(s) | 397, 700, 1118 |
| BstV2I | GAAGAC | 2 cut(s) | 147, 1008 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1078 |
| BsuI | GTATCC | 2 cut(s) | 137, 798 |
| BsuRI | GGCC | 3 cut(s) | 179, 975, 1157 |
| BtgI | CCRYGG | 2 cut(s) | 138, 414 |
| BtrI | CACGTC | 1 cut(s) | 286 |
| BtsCI | GGATG | 6 cut(s) | 9, 631, 688, 737, 832, 1035 |
| BtsIMutI | CAGTG | 1 cut(s) | 1135 |
| Cac8I | GCNNGC | 1 cut(s) | 274 |
| CciI | TCATGA | 1 cut(s) | 496 |
| CfoI | GCGC | 3 cut(s) | 274, 276, 873 |
| Cfr13I | GGNCC | 3 cut(s) | 201, 777, 946 |
| CseI | GACGC | 2 cut(s) | 242, 278 |
| Csp6I | GTAC | 3 cut(s) | 184, 450, 619 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 290, 325 |
| CviAII | CATG | 4 cut(s) | 23, 497, 695, 1078 |
| CviQI | GTAC | 3 cut(s) | 184, 450, 619 |
| DdeI | CTNAG | 3 cut(s) | 237, 245, 576 |
| DpnI | GATC | 4 cut(s) | 230, 384, 1083, 1125 |
| DpnII | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| DraI | TTTAAA | 1 cut(s) | 1167 |
| EaeI | YGGCCR | 1 cut(s) | 177 |
| Eam1104I | CTCTTC | 2 cut(s) | 191, 519 |
| EarI | CTCTTC | 2 cut(s) | 191, 519 |
| Eco130I | CCWWGG | 1 cut(s) | 976 |
| Eco47I | GGWCC | 3 cut(s) | 201, 777, 946 |
| Eco47III | AGCGCT | 1 cut(s) | 872 |
| Eco88I | CYCGRG | 1 cut(s) | 426 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 821 |
| EcoO109I | RGGNCCY | 2 cut(s) | 201, 946 |
| EcoT14I | CCWWGG | 1 cut(s) | 976 |
| ErhI | CCWWGG | 1 cut(s) | 976 |
| Esp3I | CGTCTC | 1 cut(s) | 261 |
| FaeI | CATG | 4 cut(s) | 26, 500, 698, 1081 |
| FaqI | GGGAC | 4 cut(s) | 156, 763, 932, 1163 |
| FatI | CATG | 4 cut(s) | 22, 496, 694, 1077 |
| FbaI | TGATCA | 2 cut(s) | 382, 1123 |
| Fnu4HI | GCNGC | 3 cut(s) | 411, 714, 1107 |
| FokI | GGATG | 5 cut(s) | 638, 695, 744, 839, 1042 |
| Fsp4HI | GCNGC | 3 cut(s) | 411, 714, 1107 |
| GlaI | GCGC | 3 cut(s) | 273, 275, 872 |
| GluI | GCNGC | 3 cut(s) | 411, 714, 1107 |
| GsaI | CCCAGC | 2 cut(s) | 254, 1113 |
| HaeII | RGCGCY | 1 cut(s) | 874 |
| HaeIII | GGCC | 3 cut(s) | 179, 975, 1157 |
| HapII | CCGG | 2 cut(s) | 987, 1025 |
| HgaI | GACGC | 2 cut(s) | 242, 278 |
| HhaI | GCGC | 3 cut(s) | 274, 276, 873 |
| Hin1II | CATG | 4 cut(s) | 26, 500, 698, 1081 |
| Hin6I | GCGC | 3 cut(s) | 272, 274, 871 |
| HinP1I | GCGC | 3 cut(s) | 272, 274, 871 |
| HinfI | GANTC | 6 cut(s) | 329, 389, 437, 698, 857, 902 |
| HpaII | CCGG | 2 cut(s) | 987, 1025 |
| HphI | GGTGA | 3 cut(s) | 40, 630, 1112 |
| Hpy166II | GTNNAC | 1 cut(s) | 901 |
| Hpy188I | TCNGA | 3 cut(s) | 246, 328, 604 |
| Hpy188III | TCNNGA | 6 cut(s) | 346, 386, 426, 497, 674, 800 |
| Hpy8I | GTNNAC | 1 cut(s) | 901 |
| Hpy99I | CGWCG | 3 cut(s) | 236, 287, 1163 |
| HpyAV | CCTTC | 4 cut(s) | 458, 643, 801, 937 |
| HpyCH4III | ACNGT | 3 cut(s) | 31, 41, 1130 |
| HpyCH4IV | ACGT | 2 cut(s) | 115, 285 |
| HpyCH4V | TGCA | 5 cut(s) | 26, 210, 629, 740, 1106 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 185, 216, 233, 261 |
| HpyF3I | CTNAG | 3 cut(s) | 237, 245, 576 |
| HpySE526I | ACGT | 2 cut(s) | 115, 285 |
| Hsp92II | CATG | 4 cut(s) | 26, 500, 698, 1081 |
| HspAI | GCGC | 3 cut(s) | 272, 274, 871 |
| Ksp22I | TGATCA | 2 cut(s) | 382, 1123 |
| Kzo9I | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| LmnI | GCTCC | 1 cut(s) | 534 |
| Lsp1109I | GCAGC | 3 cut(s) | 397, 700, 1118 |
| LweI | GCATC | 4 cut(s) | 616, 760, 1093, 1123 |
| MaeII | ACGT | 2 cut(s) | 115, 285 |
| MaeIII | GTNAC | 2 cut(s) | 35, 286 |
| MalI | GATC | 4 cut(s) | 230, 384, 1083, 1125 |
| MauBI | CGCGCGCG | 1 cut(s) | 272 |
| MboI | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| MhlI | GDGCHC | 1 cut(s) | 221 |
| MlyI | GAGTC | 3 cut(s) | 338, 866, 896 |
| MmeI | TCCRAC | 1 cut(s) | 885 |
| MroXI | GAANNNNTTC | 2 cut(s) | 116, 653 |
| MseI | TTAA | 5 cut(s) | 315, 354, 933, 1143, 1166 |
| MslI | CAYNNNNRTG | 4 cut(s) | 559, 643, 1076, 1131 |
| MspA1I | CMGCKG | 1 cut(s) | 1109 |
| MspI | CCGG | 2 cut(s) | 987, 1025 |
| MspR9I | CCNGG | 1 cut(s) | 1026 |
| Mva1269I | GAATGC | 1 cut(s) | 653 |
| MvnI | CGCG | 5 cut(s) | 188, 272, 274, 276, 458 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 185, 216, 233, 261 |
| NciI | CCSGG | 1 cut(s) | 1026 |
| NdeII | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| NlaIII | CATG | 4 cut(s) | 26, 500, 698, 1081 |
| NlaIV | GGNNCC | 5 cut(s) | 299, 325, 536, 779, 948 |
| NmeAIII | GCCGAG | 1 cut(s) | 205 |
| NmuCI | GTSAC | 1 cut(s) | 286 |
| PaeR7I | CTCGAG | 1 cut(s) | 426 |
| PagI | TCATGA | 1 cut(s) | 496 |
| PauI | GCGCGC | 1 cut(s) | 272 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 121 |
| PctI | GAATGC | 1 cut(s) | 653 |
| PdmI | GAANNNNTTC | 2 cut(s) | 116, 653 |
| PfeI | GAWTC | 3 cut(s) | 389, 437, 698 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 175 |
| PkrI | GCNGC | 3 cut(s) | 412, 715, 1108 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 3 cut(s) | 337, 865, 896 |
| PpsI | GAGTC | 3 cut(s) | 337, 865, 896 |
| PpuMI | RGGWCCY | 2 cut(s) | 201, 946 |
| PshAI | GACNNNNGTC | 1 cut(s) | 148 |
| Psp1406I | AACGTT | 1 cut(s) | 115 |
| Psp5II | RGGWCCY | 2 cut(s) | 201, 946 |
| PspFI | CCCAGC | 2 cut(s) | 250, 1109 |
| PspN4I | GGNNCC | 5 cut(s) | 299, 325, 536, 779, 948 |
| PspPI | GGNCC | 3 cut(s) | 201, 777, 946 |
| PspPPI | RGGWCCY | 2 cut(s) | 201, 946 |
| PteI | GCGCGC | 1 cut(s) | 272 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| PvuII | CAGCTG | 1 cut(s) | 1109 |
| RsaI | GTAC | 3 cut(s) | 185, 451, 620 |
| RsaNI | GTAC | 3 cut(s) | 184, 450, 619 |
| RseI | CAYNNNNRTG | 4 cut(s) | 559, 643, 1076, 1131 |
| SaqAI | TTAA | 5 cut(s) | 315, 354, 933, 1143, 1166 |
| SatI | GCNGC | 3 cut(s) | 411, 714, 1107 |
| Sau3AI | GATC | 4 cut(s) | 228, 382, 1081, 1123 |
| Sau96I | GGNCC | 3 cut(s) | 201, 777, 946 |
| SchI | GAGTC | 3 cut(s) | 338, 866, 896 |
| ScrFI | CCNGG | 1 cut(s) | 1026 |
| SduI | GDGCHC | 1 cut(s) | 221 |
| SfaNI | GCATC | 4 cut(s) | 616, 760, 1093, 1123 |
| Sfr274I | CTCGAG | 1 cut(s) | 426 |
| SinI | GGWCC | 3 cut(s) | 201, 777, 946 |
| SlaI | CTCGAG | 1 cut(s) | 426 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 559, 643, 1076, 1131 |
| SmlI | CTYRAG | 2 cut(s) | 426, 480 |
| SmoI | CTYRAG | 2 cut(s) | 426, 480 |
| SsiI | CCGC | 4 cut(s) | 130, 276, 458, 1151 |
| SspI | AATATT | 1 cut(s) | 174 |
| StyD4I | CCNGG | 1 cut(s) | 1024 |
| StyI | CCWWGG | 1 cut(s) | 976 |
| TaaI | ACNGT | 3 cut(s) | 31, 41, 1130 |
| TaiI | ACGT | 2 cut(s) | 118, 288 |
| TaqI | TCGA | 7 cut(s) | 164, 194, 221, 231, 282, 345, 427 |
| TaqII | GACCGA | 1 cut(s) | 331 |
| TatI | WGTACW | 2 cut(s) | 449, 618 |
| TfiI | GAWTC | 3 cut(s) | 389, 437, 698 |
| Tru1I | TTAA | 5 cut(s) | 315, 354, 933, 1143, 1166 |
| Tru9I | TTAA | 5 cut(s) | 315, 354, 933, 1143, 1166 |
| TscAI | CASTG | 1 cut(s) | 1135 |
| TseFI | GTSAC | 1 cut(s) | 286 |
| TseI | GCWGC | 3 cut(s) | 410, 713, 1106 |
| Tsp45I | GTSAC | 1 cut(s) | 286 |
| TspDTI | ATGAA | 7 cut(s) | 459, 485, 513, 522, 528, 534, 952 |
| TspGWI | ACGGA | 2 cut(s) | 76, 431 |
| TspRI | CASTG | 1 cut(s) | 1135 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 175 |
| VpaK11BI | GGWCC | 3 cut(s) | 201, 777, 946 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 821 |
| XapI | RAATTY | 2 cut(s) | 1145, 1169 |
| XhoI | CTCGAG | 1 cut(s) | 426 |
| XmnI | GAANNNNTTC | 2 cut(s) | 116, 653 |