AT3G18830
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
6488843 .. 6491429
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G18830.1

Sequence Viewer

Length: 1620 bp
ATGACAGGTGCCACACCGGAAAACCGAACGGCCCCGTCGCCACCACCGGTGAAACATGTGCCGGAGTCAGTTCTGCCGGCTAAACCACCAAAGAGGAACAATTATGCATTCGCGTGTGCTATCTTAGCTTCCATGACTTCTATCCTCCTTGGTTATGATATAGGAGTGATGAGTGGAGCAATGATTTATATAAAGAGAGATTTGAAGATTAATGATTTACAAATCGGGATTCTCGCTGGAAGCCTCAACATCTATTCACTTATAGGATCTTGCGCCGCCGGAAGAACCTCTGACTGGATTGGTCGGCGTTACACTATCGTGTTGGCTGGAGCCATATTCTTCGCCGGAGCTATCCTTATGGGATTGTCCCCTAACTACGCTTTCCTCATGTTCGGAAGGTTCATCGCCGGTATCGGCGTCGGATATGCTCTCATGATCGCACCAGTTTATACCGCCGAAGTCTCTCCGGCATCTTCCCGCGGCTTCCTCAATTCCTTCCCCGAGGTGTTTATCAACGCCGGAATTATGCTCGGGTACGTATCAAATCTGGCTTTCTCGAACTTGCCGTTGAAGGTAGGATGGAGACTGATGCTCGGAATCGGAGCCGTACCTTCCGTGATACTCGCTATCGGCGTTCTCGCTATGCCGGAATCTCCACGGTGGCTCGTTATGCAAGGCCGTCTCGGTGATGCCAAGCGCGTTCTGGACAAAACCTCTGATTCCCCCACCGAAGCAACTCTCCGTCTCGAAGACATCAAACACGCCGCTGGTATTCCCGCCGATTGCCACGACGACGTCGTTCAGGTGTCGAGGAGGAACAGTCATGGAGAAGGAGTTTGGAGAGAGCTTTTAATCCGACCAACACCAGCCGTGCGTCGTGTTATGATCGCCGCAATCGGAATCCATTTCTTCCAGCAAGCTTCCGGTATCGACGCGGTGGTTCTCTTCTCACCGCGAATTTTCAAAACCGCCGGACTCAAAACCGATCACCAACAGCTTCTAGCGACTGTAGCAGTAGGAGTAGTGAAGACATCATTCATACTAGTCGCCACTTTCTTACTCGACAGAATCGGGAGAAGACCATTGCTTCTAACCAGCGTAGGAGGAATGGTACTATCTCTAGCAGCGTTAGGGACTTCTCTAACGATTATAGACCAGTCAGAGAAGAAAGTGATGTGGGCTGTGGTTGTAGCTATAGCTACGGTGATGACTTATGTAGCTACGTTTTCGATAGGAGCTGGACCGATAACTTGGGTTTATAGCTCGGAGATATTCCCGTTGAGGTTGAGATCACAGGGCTCGAGTATGGGTGTGGTGGTGAACAGAGTGACTAGTGGTGTGATCTCGATATCGTTTCTTCCAATGTCGAAAGCGATGACTACTGGTGGAGCGTTTTACTTGTTTGGAGGGATTGCGACTGTGGCTTGGGTTTTCTTTTACACTTTCTTGCCGGAGACGCAAGGGAGGATGCTTGAGGATATGGATGAGCTTTTCAGTGGTTTCAGGTGGAGAGATTCCAAGAGTAAGCCTAAGGGTAACCCCGAGAAGACGGTACCGAATCCCGAGGTTGAGATTGGATCAAACAAGCAGTGGAAGGAAGGAGACACACAAAGTTCGTAG

Protein Analysis

539

Amino Acids

58.1

Weight (kDa)

9.59

Isoelectric Point (pI)

47.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 39 - 498 2.4e-108 Sugar (and other) transporter
MFS_1 PF07690 45 - 443 5e-32 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 798
Acc65I GGTACC 1 cut(s) 1552
AccB1I GGYRCC 2 cut(s) 8, 1552
AccII CGCG 5 cut(s) 113, 480, 699, 935, 955
AclWI GGATC 2 cut(s) 274, 1585
AcsI RAATTY 1 cut(s) 957
AcyI GRCGYC 2 cut(s) 417, 795
AfaI GTAC 4 cut(s) 536, 609, 1113, 1554
AfiI CCNNNNNNNGG 1 cut(s) 294
AflIII ACRYGT 1 cut(s) 55
AgeI ACCGGT 1 cut(s) 46
AgsI TTSAA 3 cut(s) 205, 571, 964
AhlI ACTAGT 2 cut(s) 1042, 1331
AleI CACNNNNGTG 1 cut(s) 317
Alw26I GTCTC 6 cut(s) 466, 577, 686, 749, 1448, 1596
AlwI GGATC 2 cut(s) 274, 1585
Ama87I CYCGRG 5 cut(s) 500, 530, 1300, 1541, 1562
AoxI GGCC 2 cut(s) 30, 676
ApeKI GCWGC 1 cut(s) 1124
ApoI RAATTY 1 cut(s) 957
AseI ATTAAT 1 cut(s) 210
AsiGI ACCGGT 1 cut(s) 46
Asp718I GGTACC 1 cut(s) 1552
AspLEI GCGC 2 cut(s) 275, 699
AspS9I GGNCC 2 cut(s) 31, 1241
AsuHPI GGTGA 6 cut(s) 61, 698, 942, 980, 1216, 1330
AvaI CYCGRG 5 cut(s) 500, 530, 1300, 1541, 1562
AvaII GGWCC 1 cut(s) 1241
AxyI CCTNAGG 1 cut(s) 1530
BanI GGYRCC 2 cut(s) 8, 1552
BanII GRGCYC 1 cut(s) 1301
BbsI GAAGAC 4 cut(s) 756, 1034, 1084, 1553
BbvI GCAGC 1 cut(s) 1136
BccI CCATC 1 cut(s) 573
BceAI ACGGC 5 cut(s) 45, 550, 590, 663, 854
BcoDI GTCTC 6 cut(s) 466, 577, 686, 749, 1448, 1596
BcuI ACTAGT 2 cut(s) 1042, 1331
BfaI CTAG 4 cut(s) 1001, 1043, 1121, 1332
BfmI CTRYAG 2 cut(s) 1008, 1194
BisI GCNGC 5 cut(s) 276, 481, 765, 891, 1125
BlsI GCNGC 5 cut(s) 277, 482, 766, 892, 1126
Bme18I GGWCC 1 cut(s) 1241
BmeT110I CYCGRG 5 cut(s) 500, 530, 1300, 1541, 1562
BmgT120I GGNCC 2 cut(s) 31, 1241
BmiI GGNNCC 5 cut(s) 10, 33, 331, 604, 1554
BmsI GCATC 4 cut(s) 479, 579, 679, 1458
BpiI GAAGAC 4 cut(s) 756, 1034, 1084, 1553
BpmI CTGGAG 1 cut(s) 348
BpuEI CTTGAG 1 cut(s) 1493
BsaAI YACGTR 1 cut(s) 538
BsaHI GRCGYC 2 cut(s) 417, 795
BsaJI CCNNGG 5 cut(s) 148, 478, 501, 656, 1563
BsaWI WCCGGW 3 cut(s) 16, 46, 923
BsaXI ACNNNNNCTCC 6 cut(s) 805, 819, 835, 849, 1095, 1125
Bsc4I CCNNNNNNNGG 1 cut(s) 294
Bse118I RCCGGY 3 cut(s) 46, 76, 407
Bse1I ACTGG 4 cut(s) 299, 443, 1156, 1387
Bse21I CCTNAGG 1 cut(s) 1530
Bse3DI GCAATG 2 cut(s) 186, 1082
BseDI CCNNGG 5 cut(s) 148, 478, 501, 656, 1563
BseGI GGATG 3 cut(s) 584, 1473, 1489
BseLI CCNNNNNNNGG 1 cut(s) 294
BseMI GCAATG 2 cut(s) 186, 1082
BseNI ACTGG 4 cut(s) 299, 443, 1156, 1387
BseRI GAGGAG 1 cut(s) 826
BseXI GCAGC 1 cut(s) 1136
Bsh1236I CGCG 5 cut(s) 113, 480, 699, 935, 955
BshFI GGCC 2 cut(s) 32, 678
BshNI GGYRCC 2 cut(s) 8, 1552
BshTI ACCGGT 1 cut(s) 46
BsiHKCI CYCGRG 5 cut(s) 500, 530, 1300, 1541, 1562
BslFI GGGAC 2 cut(s) 352, 1147
BslI CCNNNNNNNGG 1 cut(s) 294
BsmAI GTCTC 6 cut(s) 466, 577, 686, 749, 1448, 1596
BsmBI CGTCTC 3 cut(s) 686, 749, 1448
BsmFI GGGAC 2 cut(s) 352, 1147
BsmI GAATGC 1 cut(s) 107
BsnI GGCC 2 cut(s) 32, 678
BsoBI CYCGRG 5 cut(s) 500, 530, 1300, 1541, 1562
Bsp1286I GDGCHC 1 cut(s) 1301
Bsp143I GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
BspANI GGCC 2 cut(s) 32, 678
BspFNI CGCG 5 cut(s) 113, 480, 699, 935, 955
BspHI TCATGA 1 cut(s) 432
BspLI GGNNCC 5 cut(s) 10, 33, 331, 604, 1554
BspPI GGATC 2 cut(s) 274, 1585
BspT107I GGYRCC 2 cut(s) 8, 1552
BsrDI GCAATG 2 cut(s) 186, 1082
BsrFI RCCGGY 3 cut(s) 46, 76, 407
BsrI ACTGG 4 cut(s) 299, 443, 1156, 1387
BssAI RCCGGY 3 cut(s) 46, 76, 407
BssECI CCNNGG 5 cut(s) 148, 478, 501, 656, 1563
BssMI GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
BssNI GRCGYC 2 cut(s) 417, 795
BssT1I CCWWGG 1 cut(s) 148
Bst4CI ACNGT 6 cut(s) 660, 821, 1009, 1204, 1420, 1552
Bst6I CTCTTC 1 cut(s) 950
BstACI GRCGYC 2 cut(s) 417, 795
BstBAI YACGTR 1 cut(s) 538
BstC8I GCNNGC 2 cut(s) 78, 918
BstDEI CTNAG 2 cut(s) 124, 1530
BstDSI CCRYGG 2 cut(s) 478, 656
BstEII GGTNACC 1 cut(s) 1535
BstF5I GGATG 3 cut(s) 584, 1473, 1489
BstFNI CGCG 5 cut(s) 113, 480, 699, 935, 955
BstHHI GCGC 2 cut(s) 275, 699
BstKTI GATC 7 cut(s) 269, 438, 888, 988, 1292, 1344, 1580
BstMAI GTCTC 6 cut(s) 466, 577, 686, 749, 1448, 1596
BstMBI GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
BstMWI GCNNNNNNNGC 5 cut(s) 125, 670, 1010, 1421, 1456
BstNSI RCATGY 1 cut(s) 59
BstPI GGTNACC 1 cut(s) 1535
BstSFI CTRYAG 2 cut(s) 1008, 1194
BstSNI TACGTA 1 cut(s) 538
BstUI CGCG 5 cut(s) 113, 480, 699, 935, 955
BstV1I GCAGC 1 cut(s) 1136
BstV2I GAAGAC 4 cut(s) 756, 1034, 1084, 1553
BstX2I RGATCY 1 cut(s) 266
BstYI RGATCY 1 cut(s) 266
Bsu36I CCTNAGG 1 cut(s) 1530
BsuRI GGCC 2 cut(s) 32, 678
BtgI CCRYGG 2 cut(s) 478, 656
BtgZI GCGATG 2 cut(s) 388, 1388
BtsCI GGATG 3 cut(s) 584, 1473, 1489
BtsI GCAGTG 1 cut(s) 1595
BtsIMutI CAGTG 2 cut(s) 1501, 1595
Cac8I GCNNGC 2 cut(s) 78, 918
CciI TCATGA 1 cut(s) 432
CfoI GCGC 2 cut(s) 275, 699
Cfr10I RCCGGY 3 cut(s) 46, 76, 407
Cfr13I GGNCC 2 cut(s) 31, 1241
Cfr42I CCGCGG 1 cut(s) 481
CseI GACGC 4 cut(s) 406, 863, 941, 1465
Csp6I GTAC 4 cut(s) 535, 608, 1112, 1553
CspAI ACCGGT 1 cut(s) 46
CviAII CATG 5 cut(s) 56, 133, 388, 433, 824
CviQI GTAC 4 cut(s) 535, 608, 1112, 1553
DdeI CTNAG 2 cut(s) 124, 1530
DpnI GATC 7 cut(s) 268, 437, 887, 987, 1291, 1343, 1579
DpnII GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
Eam1104I CTCTTC 1 cut(s) 950
EarI CTCTTC 1 cut(s) 950
Eco105I TACGTA 1 cut(s) 538
Eco130I CCWWGG 1 cut(s) 148
Eco24I GRGCYC 1 cut(s) 1301
Eco32I GATATC 1 cut(s) 1350
Eco47I GGWCC 1 cut(s) 1241
Eco81I CCTNAGG 1 cut(s) 1530
Eco88I CYCGRG 5 cut(s) 500, 530, 1300, 1541, 1562
Eco91I GGTNACC 1 cut(s) 1535
EcoO65I GGTNACC 1 cut(s) 1535
EcoRV GATATC 1 cut(s) 1350
EcoT14I CCWWGG 1 cut(s) 148
EcoT22I ATGCAT 1 cut(s) 109
EcoT38I GRGCYC 1 cut(s) 1301
ErhI CCWWGG 1 cut(s) 148
Esp3I CGTCTC 3 cut(s) 686, 749, 1448
FaeI CATG 5 cut(s) 59, 136, 391, 436, 827
FaqI GGGAC 2 cut(s) 352, 1147
FatI CATG 5 cut(s) 55, 132, 387, 432, 823
FauI CCCGC 2 cut(s) 485, 784
Fnu4HI GCNGC 5 cut(s) 276, 481, 765, 891, 1125
FokI GGATG 3 cut(s) 591, 1480, 1496
FriOI GRGCYC 1 cut(s) 1301
Fsp4HI GCNGC 5 cut(s) 276, 481, 765, 891, 1125
FspBI CTAG 4 cut(s) 1001, 1043, 1121, 1332
GlaI GCGC 2 cut(s) 274, 698
GluI GCNGC 5 cut(s) 276, 481, 765, 891, 1125
GsuI CTGGAG 1 cut(s) 348
HaeIII GGCC 2 cut(s) 32, 678
HgaI GACGC 4 cut(s) 406, 863, 941, 1465
HhaI GCGC 2 cut(s) 275, 699
Hin1I GRCGYC 2 cut(s) 417, 795
Hin1II CATG 5 cut(s) 59, 136, 391, 436, 827
Hin6I GCGC 2 cut(s) 273, 697
HinP1I GCGC 2 cut(s) 273, 697
HindIII AAGCTT 1 cut(s) 918
HphI GGTGA 6 cut(s) 61, 698, 942, 980, 1216, 1330
Hpy166II GTNNAC 1 cut(s) 1321
Hpy188III TCNNGA 8 cut(s) 226, 433, 556, 704, 746, 1072, 1345, 1562
Hpy8I GTNNAC 1 cut(s) 1321
Hpy99I CGWCG 7 cut(s) 40, 422, 794, 797, 800, 879, 935
HpyAV CCTTC 7 cut(s) 390, 505, 565, 621, 824, 1588, 1592
HpyCH4III ACNGT 6 cut(s) 660, 821, 1009, 1204, 1420, 1552
HpyCH4IV ACGT 3 cut(s) 537, 795, 1223
HpyCH4V TGCA 2 cut(s) 107, 673
HpyF10VI GCNNNNNNNGC 5 cut(s) 125, 670, 1010, 1421, 1456
HpyF3I CTNAG 2 cut(s) 124, 1530
HpySE526I ACGT 3 cut(s) 537, 795, 1223
Hsp92I GRCGYC 2 cut(s) 417, 795
Hsp92II CATG 5 cut(s) 59, 136, 391, 436, 827
HspAI GCGC 2 cut(s) 273, 697
KpnI GGTACC 1 cut(s) 1556
KroI GCCGGC 1 cut(s) 76
KroNI GCCGGC 1 cut(s) 78
KspI CCGCGG 1 cut(s) 481
Kzo9I GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
LmnI GCTCC 6 cut(s) 176, 329, 347, 602, 1235, 1388
Lsp1109I GCAGC 1 cut(s) 1136
LweI GCATC 4 cut(s) 479, 579, 679, 1458
MaeI CTAG 4 cut(s) 1001, 1043, 1121, 1332
MaeII ACGT 3 cut(s) 537, 795, 1223
MaeIII GTNAC 3 cut(s) 308, 1327, 1535
MalI GATC 7 cut(s) 268, 437, 887, 987, 1291, 1343, 1579
MboI GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
MflI RGATCY 1 cut(s) 266
MhlI GDGCHC 1 cut(s) 1301
MluCI AATT 4 cut(s) 100, 490, 522, 957
MlyI GAGTC 2 cut(s) 74, 969
MmeI TCCRAC 2 cut(s) 400, 880
Mph1103I ATGCAT 1 cut(s) 109
MroNI GCCGGC 1 cut(s) 76
MseI TTAA 2 cut(s) 210, 851
MslI CAYNNNNRTG 2 cut(s) 112, 317
MspA1I CMGCKG 2 cut(s) 480, 767
Mva1269I GAATGC 1 cut(s) 107
MvnI CGCG 5 cut(s) 113, 480, 699, 935, 955
MwoI GCNNNNNNNGC 5 cut(s) 125, 670, 1010, 1421, 1456
NaeI GCCGGC 1 cut(s) 78
NdeII GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
NgoMIV GCCGGC 1 cut(s) 76
NlaIII CATG 5 cut(s) 59, 136, 391, 436, 827
NlaIV GGNNCC 5 cut(s) 10, 33, 331, 604, 1554
NmuCI GTSAC 1 cut(s) 1327
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 1 cut(s) 59
OliI CACNNNNGTG 1 cut(s) 317
PaeR7I CTCGAG 1 cut(s) 1300
PagI TCATGA 1 cut(s) 432
PciI ACATGT 1 cut(s) 55
PcsI WCGNNNNNNNCGW 3 cut(s) 563, 630, 795
PctI GAATGC 1 cut(s) 107
PdiI GCCGGC 1 cut(s) 78
PfeI GAWTC 8 cut(s) 229, 597, 650, 719, 900, 1068, 1514, 1558
PflFI GACNNNGTC 1 cut(s) 794
PinAI ACCGGT 1 cut(s) 46
PkrI GCNGC 5 cut(s) 277, 482, 766, 892, 1126
PleI GAGTC 2 cut(s) 73, 969
PpsI GAGTC 2 cut(s) 73, 969
Ppu21I YACGTR 1 cut(s) 538
PscI ACATGT 1 cut(s) 55
PshBI ATTAAT 1 cut(s) 210
PspEI GGTNACC 1 cut(s) 1535
PspN4I GGNNCC 5 cut(s) 10, 33, 331, 604, 1554
PspPI GGNCC 2 cut(s) 31, 1241
PspXI VCTCGAGB 1 cut(s) 1300
PsuI RGATCY 1 cut(s) 266
PsyI GACNNNGTC 1 cut(s) 794
RsaI GTAC 4 cut(s) 536, 609, 1113, 1554
RsaNI GTAC 4 cut(s) 535, 608, 1112, 1553
RseI CAYNNNNRTG 2 cut(s) 112, 317
SacII CCGCGG 1 cut(s) 481
SaqAI TTAA 2 cut(s) 210, 851
SatI GCNGC 5 cut(s) 276, 481, 765, 891, 1125
Sau3AI GATC 7 cut(s) 266, 435, 885, 985, 1289, 1341, 1577
Sau96I GGNCC 2 cut(s) 31, 1241
SchI GAGTC 2 cut(s) 74, 969
SduI GDGCHC 1 cut(s) 1301
SfaNI GCATC 4 cut(s) 479, 579, 679, 1458
SfcI CTRYAG 2 cut(s) 1008, 1194
Sfr274I CTCGAG 1 cut(s) 1300
Sfr303I CCGCGG 1 cut(s) 481
SgrAI CRCCGGYG 1 cut(s) 46
SgrBI CCGCGG 1 cut(s) 481
SinI GGWCC 1 cut(s) 1241
SlaI CTCGAG 1 cut(s) 1300
SmiMI CAYNNNNRTG 2 cut(s) 112, 317
SmlI CTYRAG 2 cut(s) 1300, 1472
SmoI CTYRAG 2 cut(s) 1300, 1472
SnaBI TACGTA 1 cut(s) 538
SpeI ACTAGT 2 cut(s) 1042, 1331
Sse9I AATT 4 cut(s) 100, 490, 522, 957
SspMI CTAG 4 cut(s) 1001, 1043, 1121, 1332
StyI CCWWGG 1 cut(s) 148
TaaI ACNGT 6 cut(s) 660, 821, 1009, 1204, 1420, 1552
TaiI ACGT 3 cut(s) 540, 798, 1226
TaqI TCGA 9 cut(s) 557, 747, 809, 930, 1062, 1229, 1301, 1346, 1367
TaqII GACCGA 1 cut(s) 1258
TasI AATT 4 cut(s) 100, 490, 522, 957
TauI GCSGC 4 cut(s) 278, 483, 767, 893
TfiI GAWTC 8 cut(s) 229, 597, 650, 719, 900, 1068, 1514, 1558
Tru1I TTAA 2 cut(s) 210, 851
Tru9I TTAA 2 cut(s) 210, 851
TscAI CASTG 2 cut(s) 1501, 1595
TseFI GTSAC 1 cut(s) 1327
TseI GCWGC 1 cut(s) 1124
Tsp45I GTSAC 1 cut(s) 1327
TspDTI ATGAA 2 cut(s) 391, 1027
TspGWI ACGGA 2 cut(s) 604, 731
TspRI CASTG 2 cut(s) 1501, 1595
Tth111I GACNNNGTC 1 cut(s) 794
VpaK11BI GGWCC 1 cut(s) 1241
VspI ATTAAT 1 cut(s) 210
XapI RAATTY 1 cut(s) 957
XceI RCATGY 1 cut(s) 59
XcmI CCANNNNNNNNNTGG 1 cut(s) 700
XhoI CTCGAG 1 cut(s) 1300
XspI CTAG 4 cut(s) 1001, 1043, 1121, 1332
ZraI GACGTC 1 cut(s) 796
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.