Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0000765

Physical Location & Seq

Genomic Coordinates Reverse (-)

7269683 .. 7272704

Gene Structure 3022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g06330.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGCAGACCCTCTTCACCTCAAGTTCTCAAAACATCTATTATCCACTTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTAAATTACATCTCTTCAAATATTACTCTCCATTTTTCCCCTCCACCTCTCTTTTCTCTGAGAAGATGGCCGGCCGGAGAGCTGAAGATAATGCCGTCTTCAGCCAACAAACCGGGAGCAGAGGCCTCTCAGACTTTGATCCCCCAAAGAAACCCAAAAGAAATAAGTACGCCTTTGGTTGTGCCATTTTGGCTTCCATGACTTCAATCTTGCTGGGTTATGACATTGGTGTGATGAGTGGAGCTGCAATTTACATACAAAAGGACCTCAAGATTTCCGACGTGCAAATTGAGATCCTACTCGGTATTCTAAACGTCTACTCCCTCTTCGGCTCCGCCGCTGCCGGAAGAACATCCGACTGGATTGGTCGCCGATACACCATAGTCCTTGCCGGGGCTATTTTCTTCGCCGGAGCTCTTCTTATGGGATTCGCCACAAACTATGTCTTTCTAATGGTCGGCCGGTTTGTAGCTGGGATTGGCGTCGGGTACGCCCTCATGATCGCTCCTGTCTATACCGCCGAGGTCTCGCCAGCGTCATCTCGTGGGTTCCTCACATCTTTCCCAGAGGTCTTTGTCAATGTAGGGATACTGTTGGGCTACGTGTCCAACTATGCGTTCTCGAAGCTCCCAACTAACTTGGGGTGGCGGCTCATGCTCGGCGTCGGCGCAGTCCCCTGCGTTTTTTTGGCCTTAGGCGTCTTAGCCATGCCAGAGTCGCCGCGCTGGCTCGTCATGCAGGGACGGCTCGGGGACGCGACACGTGTTCTCAACAAAACCTCAGACTCCAAGGAGGAGTCTCTGCTTCGATTAGCGGACATCAAAGAAGCTGCTGGAATCCCCGAGCACTGCACCGACGACGTCGTTCAGGTCCCCAAACGTAGCAAAGGCCAAGACGTCTGGAAAGAGTTGCTCCTCCATCCAACACCAGCAGTTCGTCACATTTTAATCTGCGCCGTCGGTATCCATTTCTTTCAGCAGGCCTCGGGCATCGACGCCATCGTTTTGTACAGCCCAAGAGTCTTTGAGAAGGCTGGGATAACCAACTCCGACCACAAGCTACTCTGCACTGTAGCAGTTGGATTAGCCAAGACCATTTTCATCCTCGTCGCCACGTTTTTGCTTGATCGGGTCGGACGGCGTCCGTTGCTTCTATCTAGTGTTGCCGGGATGATATTTTCCCTCGGAGCTCTTGGTGTCGGCCTTACAATCATTGATCAGCACCACGGGGCTAAGATGACGTGGACTACTGCACTGTGCTTGACCATGGTAATAGCGTACGCCGCGCTCTTCTCTATCGGATTGGGGCCCATCACTTGGGTTTATAGCTCTGAGATCTTTCCGTTGAAGCTACGTGCCCAAGGCTGTAGTATGGGAGTGGCGATGAATAGGGTGGTGAGTGGGGTCCTCACAATGACGTTTATTTCGTTGTATAAGGCCATAACAATGGGTGGGGCCTTCTTTCTTTACGGGGGAATTGCTGCTGTTGCATGGGTGTTCTTTTATACGATGTACCCGGAGACACAAGGTAGAACCCTAGAAGATATGGAGGTCTTGTTTGGCAAGTTCCACAAGTGGAGAGAAGCGAATGCAATGCTCGAAACGAAAACCCAAGTTGATCATGGCGATGGCAACAATGGAACTGGTGCGGTCGAATTAGGCACAAAAGGGCCAGCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005365 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015146 GO:0015148 GO:0015149 GO:0015166 GO:0015168 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015575 GO:0015576 GO:0015591 GO:0015672 GO:0015749 GO:0015750 GO:0015752 GO:0015753 GO:0015757 GO:0015791 GO:0015793 GO:0015795 GO:0015797 GO:0015798 GO:0015850 GO:0016020 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0042995 GO:0044464 GO:0046323 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090406 GO:0090696 GO:0090697 GO:0090698 GO:0098655 GO:0098660 GO:0098662 GO:0099402 GO:0120025 GO:1901618 GO:1902600 GO:1904659 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

596

Amino Acids

64.5

Weight (kDa)

9.21

Isoelectric Point (pI)

36.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16120 AT2G16130 AT3G18830
fragaria_vesca	FvH4_2g08400 FvH4_2g08400 FvH4_2g08430 FvH4_2g08430 FvH4_2g08430
malus_domestica	MD05G1068600.v1.1 MD05G1068700.v1.1 MD05G1069100.v1.1 MD05G1069700.v1.1 MD10G1078900.v1.1 MD10G1079100.v1.1 MD10G1079200.v1.1 MD10G1079500.v1.1 MD10G1079600.v1.1 MD10G1079700.v1.1 MD10G1079800.v1.1 MD10G1079900.v1.1 MD10G1080000.v1.1 MD10G1080100.v1.1 MD10G1106100.v1.1 MD12G1026200.v1.1 MD17G1247200.v1.1
prunus_persica	Prupe.3G071100_v2.0.a1 Prupe.8G100700_v2.0.a1 Prupe.8G101000_v2.0.a1 Prupe.8G101200_v2.0.a1 Prupe.8G101500_v2.0.a1 Prupe.8G105300_v2.0.a1 Prupe.8G105400_v2.0.a1 Prupe.8G105500_v2.0.a1 Prupe.8G105600_v2.0.a1
pyrus_communis	pycom04g19030 pycom04g19050 pycom04g19090 pycom04g19120 pycom05g05990 pycom05g06030 pycom10g06180 pycom10g06270 pycom10g06280 pycom10g06300 pycom10g06330 pycom10g06340 pycom12g02550 pycom17g26280
rosa_chinensis	RchiOBHm_Chr6g0263471 RchiOBHm_Chr6g0263621 RchiOBHm_Chr6g0263691
rosa_laevigata	RLG00000014328 RLG00000014330
rosa_multiflora	Rmu_co8086996.1_g000001 Rmu_co8446581.1_g000001 Rmu_sc0000565.1_g000052 Rmu_sc0010495.1_g000011
rosa_roxburghii	Rroxscaffold_176G00431110 Rroxscaffold_7G00204150
rosa_rugosa	Rorug06G0005300 Rorug06G0005700
rosa_samantha	Rh6AG124800 Rh6BG120900 Rh6CG119100 Rh6DG107300 Rh6DG107500
rosa_wichuraiana	Rw0G005290 Rw0G005320 Rw6G010850 Rw6G010870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	969, 1005
AccB7I	CCANNNNNTGG	1 cut(s)	1422
AccI	GTMKAC	1 cut(s)	423
AccII	CGCG	3 cut(s)	829, 863, 1391
AciI	CCGC	8 cut(s)	441, 444, 624, 754, 827, 920, 1389, 1754
AclWI	GGATC	2 cut(s)	239, 394
AcoI	YGGCCR	3 cut(s)	174, 178, 565
AcuI	CTGAAG	2 cut(s)	190, 210
AcvI	CACGTG	1 cut(s)	869
AcyI	GRCGYC	7 cut(s)	588, 768, 804, 966, 1002, 1101, 1246
AfaI	GTAC	5 cut(s)	275, 596, 1115, 1385, 1619
AfiI	CCNNNNNNNGG	2 cut(s)	499, 1422
AflII	CTTAAG	1 cut(s)	47
AflIII	ACRYGT	3 cut(s)	708, 866, 868
AgsI	TTSAA	3 cut(s)	124, 312, 1453
AjiI	CACGTC	2 cut(s)	388, 1347
AjuI	GAANNNNNNNTTGG	4 cut(s)	707, 739, 1187, 1219
Alw21I	GWGCWC	3 cut(s)	523, 954, 1297
Alw26I	GTCTC	4 cut(s)	57, 637, 909, 1619
AlwI	GGATC	2 cut(s)	239, 394
Ama87I	CYCGRG	3 cut(s)	854, 947, 1090
ApaI	GGGCCC	1 cut(s)	1416
ApeKI	GCWGC	4 cut(s)	350, 446, 935, 1586
ArsI	GACNNNNNNTTYG	2 cut(s)	1513, 1545
AspLEI	GCGC	4 cut(s)	776, 831, 1061, 1393
AspS9I	GGNCC	7 cut(s)	370, 976, 1412, 1413, 1510, 1560, 1775
AsuC2I	CCSGG	4 cut(s)	220, 499, 1273, 1622
AsuHPI	GGTGA	2 cut(s)	7, 1513
AvaI	CYCGRG	3 cut(s)	854, 947, 1090
AvaII	GGWCC	3 cut(s)	370, 976, 1510
AxyI	CCTNAGG	1 cut(s)	799
BaeGI	GKGCMC	2 cut(s)	1416, 1465
BanII	GRGCYC	3 cut(s)	523, 1297, 1416
BauI	CACGAG	1 cut(s)	648
BbrPI	CACGTG	1 cut(s)	869
BbsI	GAAGAC	1 cut(s)	196
Bbv12I	GWGCWC	3 cut(s)	523, 954, 1297
BbvI	GCAGC	4 cut(s)	337, 433, 922, 1573
BccI	CCATC	5 cut(s)	166, 1032, 1112, 1424, 1727
BceAI	ACGGC	4 cut(s)	185, 866, 1046, 1259
BcgI	CGANNNNNNTGC	2 cut(s)	1681, 1715
BciVI	GTATCC	2 cut(s)	687, 1079
BclI	TGATCA	2 cut(s)	1321, 1723
BcnI	CCSGG	4 cut(s)	220, 499, 1273, 1622
BcoDI	GTCTC	4 cut(s)	57, 637, 909, 1619
BfaI	CTAG	2 cut(s)	1263, 1643
BfmI	CTRYAG	2 cut(s)	1176, 1471
BfrI	CTTAAG	1 cut(s)	47
BfuI	GTATCC	2 cut(s)	687, 1079
BglI	GCCNNNNNGGC	2 cut(s)	296, 832
BglII	AGATCT	1 cut(s)	1440
BisI	GCNGC	8 cut(s)	351, 444, 447, 755, 827, 936, 1389, 1587
BlsI	GCNGC	8 cut(s)	352, 445, 448, 756, 828, 937, 1390, 1588
Bme1390I	CCNGG	4 cut(s)	220, 499, 1273, 1622
Bme18I	GGWCC	3 cut(s)	370, 976, 1510
BmeT110I	CYCGRG	3 cut(s)	854, 947, 1090
BmgBI	CACGTC	2 cut(s)	388, 1347
BmgT120I	GGNCC	7 cut(s)	370, 976, 1412, 1413, 1510, 1560, 1775
BmiI	GGNNCC	7 cut(s)	439, 656, 978, 1413, 1414, 1511, 1561
BmrFI	CCNGG	4 cut(s)	220, 499, 1273, 1622
BmsI	GCATC	1 cut(s)	1104
BpiI	GAAGAC	1 cut(s)	196
BpuEI	CTTGAG	2 cut(s)	4, 359
BpuMI	CCSGG	4 cut(s)	220, 499, 1273, 1622
BsaAI	YACGTR	3 cut(s)	709, 869, 1460
BsaHI	GRCGYC	7 cut(s)	588, 768, 804, 966, 1002, 1101, 1246
BsaI	GGTCTC	1 cut(s)	637
BsaJI	CCNNGG	8 cut(s)	498, 627, 894, 1089, 1288, 1330, 1371, 1465
BsaXI	ACNNNNNCTCC	4 cut(s)	410, 440, 1646, 1676
Bsc4I	CCNNNNNNNGG	2 cut(s)	499, 1422
Bse118I	RCCGGY	2 cut(s)	176, 567
Bse1I	ACTGG	2 cut(s)	470, 1753
Bse21I	CCTNAGG	1 cut(s)	799
Bse3DI	GCAATG	1 cut(s)	1704
BseDI	CCNNGG	8 cut(s)	498, 627, 894, 1089, 1288, 1330, 1371, 1465
BseGI	GGATG	4 cut(s)	458, 1024, 1206, 1281
BseLI	CCNNNNNNNGG	2 cut(s)	499, 1422
BseMI	GCAATG	1 cut(s)	1704
BseMII	CTCAG	4 cut(s)	156, 249, 900, 1428
BseNI	ACTGG	2 cut(s)	470, 1753
BseRI	GAGGAG	2 cut(s)	914, 1010
BseSI	GKGCMC	2 cut(s)	1416, 1465
BseX3I	CGGCCG	2 cut(s)	178, 565
BseXI	GCAGC	4 cut(s)	337, 433, 922, 1573
BseYI	CCCAGC	3 cut(s)	319, 578, 1139
BsgI	GTGCAG	3 cut(s)	940, 1156, 1341
Bsh1236I	CGCG	3 cut(s)	829, 863, 1391
Bsh1285I	CGRYCG	3 cut(s)	181, 568, 1758
BsiEI	CGRYCG	3 cut(s)	181, 568, 1758
BsiHKAI	GWGCWC	3 cut(s)	523, 954, 1297
BsiHKCI	CYCGRG	3 cut(s)	854, 947, 1090
BsiSI	CCGG	9 cut(s)	177, 181, 219, 450, 498, 516, 568, 1272, 1622
BsiWI	CGTACG	1 cut(s)	1383
BslFI	GGGAC	4 cut(s)	764, 861, 872, 962
BslI	CCNNNNNNNGG	2 cut(s)	499, 1422
BsmAI	GTCTC	4 cut(s)	57, 637, 909, 1619
BsmFI	GGGAC	4 cut(s)	764, 861, 872, 962
BsmI	GAATGC	1 cut(s)	1699
Bso31I	GGTCTC	1 cut(s)	637
BsoBI	CYCGRG	3 cut(s)	854, 947, 1090
Bsp120I	GGGCCC	1 cut(s)	1412
Bsp1286I	GDGCHC	5 cut(s)	523, 954, 1297, 1416, 1465
Bsp1407I	TGTACA	1 cut(s)	1113
Bsp143I	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
Bsp19I	CCATGG	1 cut(s)	1371
BspACI	CCGC	8 cut(s)	441, 444, 624, 754, 827, 920, 1389, 1754
BspCNI	CTCAG	4 cut(s)	157, 248, 899, 1429
BspFNI	CGCG	3 cut(s)	829, 863, 1391
BspHI	TCATGA	1 cut(s)	603
BspLI	GGNNCC	7 cut(s)	439, 656, 978, 1413, 1414, 1511, 1561
BspPI	GGATC	2 cut(s)	239, 394
BspQI	GCTCTTC	2 cut(s)	528, 1400
BspTI	CTTAAG	1 cut(s)	47
BspTNI	GGTCTC	1 cut(s)	637
BsrDI	GCAATG	1 cut(s)	1704
BsrFI	RCCGGY	2 cut(s)	176, 567
BsrGI	TGTACA	1 cut(s)	1113
BsrI	ACTGG	2 cut(s)	470, 1753
BssAI	RCCGGY	2 cut(s)	176, 567
BssECI	CCNNGG	8 cut(s)	498, 627, 894, 1089, 1288, 1330, 1371, 1465
BssMI	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
BssNI	GRCGYC	7 cut(s)	588, 768, 804, 966, 1002, 1101, 1246
BssSI	CACGAG	1 cut(s)	648
BssT1I	CCWWGG	3 cut(s)	894, 1371, 1465
Bst2BI	CACGAG	1 cut(s)	648
Bst4CI	ACNGT	3 cut(s)	699, 1177, 1362
Bst6I	CTCTTC	5 cut(s)	17, 125, 437, 528, 1400
BstACI	GRCGYC	7 cut(s)	588, 768, 804, 966, 1002, 1101, 1246
BstAFI	CTTAAG	1 cut(s)	47
BstAUI	TGTACA	1 cut(s)	1113
BstBAI	YACGTR	3 cut(s)	709, 869, 1460
BstC8I	GCNNGC	5 cut(s)	178, 639, 833, 1086, 1779
BstDEI	CTNAG	7 cut(s)	165, 235, 799, 808, 886, 1338, 1437
BstDSI	CCRYGG	2 cut(s)	1330, 1371
BstF5I	GGATG	4 cut(s)	458, 1024, 1206, 1281
BstFNI	CGCG	3 cut(s)	829, 863, 1391
BstHHI	GCGC	4 cut(s)	776, 831, 1061, 1393
BstKTI	GATC	7 cut(s)	247, 402, 609, 1234, 1324, 1443, 1726
BstMAI	GTCTC	4 cut(s)	57, 637, 909, 1619
BstMBI	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
BstMCI	CGRYCG	3 cut(s)	181, 568, 1758
BstMWI	GCNNNNNNNGC	9 cut(s)	296, 760, 823, 832, 841, 850, 1252, 1388, 1592
BstSCI	CCNGG	4 cut(s)	218, 497, 1271, 1620
BstSFI	CTRYAG	2 cut(s)	1176, 1471
BstSLI	GKGCMC	2 cut(s)	1416, 1465
BstUI	CGCG	3 cut(s)	829, 863, 1391
BstV1I	GCAGC	4 cut(s)	337, 433, 922, 1573
BstV2I	GAAGAC	1 cut(s)	196
BstX2I	RGATCY	2 cut(s)	399, 1440
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	2 cut(s)	399, 1440
BstZI	CGGCCG	2 cut(s)	178, 565
Bsu36I	CCTNAGG	1 cut(s)	799
BsuI	GTATCC	2 cut(s)	687, 1079
BtgI	CCRYGG	2 cut(s)	1330, 1371
BtgZI	GCGATG	2 cut(s)	1502, 1746
BtrI	CACGTC	2 cut(s)	388, 1347
BtsCI	GGATG	4 cut(s)	458, 1024, 1206, 1281
BtsI	GCAGTG	1 cut(s)	952
BtsIMutI	CAGTG	3 cut(s)	952, 1173, 1358
Cac8I	GCNNGC	5 cut(s)	178, 639, 833, 1086, 1779
CciI	TCATGA	1 cut(s)	603
CfoI	GCGC	4 cut(s)	776, 831, 1061, 1393
Cfr10I	RCCGGY	2 cut(s)	176, 567
Cfr13I	GGNCC	7 cut(s)	370, 976, 1412, 1413, 1510, 1560, 1775
CseI	GACGC	7 cut(s)	577, 630, 757, 793, 869, 1109, 1235
Csp6I	GTAC	5 cut(s)	274, 595, 1114, 1384, 1618
CviAII	CATG	8 cut(s)	304, 604, 760, 814, 841, 1372, 1596, 1727
CviQI	GTAC	5 cut(s)	274, 595, 1114, 1384, 1618
DdeI	CTNAG	7 cut(s)	165, 235, 799, 808, 886, 1338, 1437
DpnI	GATC	7 cut(s)	246, 401, 608, 1233, 1323, 1442, 1725
DpnII	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
EaeI	YGGCCR	3 cut(s)	174, 178, 565
EagI	CGGCCG	2 cut(s)	178, 565
Eam1104I	CTCTTC	5 cut(s)	17, 125, 437, 528, 1400
EarI	CTCTTC	5 cut(s)	17, 125, 437, 528, 1400
EciI	GGCGGA	1 cut(s)	430
Ecl136II	GAGCTC	2 cut(s)	521, 1295
EclXI	CGGCCG	2 cut(s)	178, 565
Eco130I	CCWWGG	3 cut(s)	894, 1371, 1465
Eco147I	AGGCCT	2 cut(s)	231, 1088
Eco24I	GRGCYC	3 cut(s)	523, 1297, 1416
Eco31I	GGTCTC	1 cut(s)	637
Eco47I	GGWCC	3 cut(s)	370, 976, 1510
Eco52I	CGGCCG	2 cut(s)	178, 565
Eco53kI	GAGCTC	2 cut(s)	521, 1295
Eco57I	CTGAAG	2 cut(s)	190, 210
Eco72I	CACGTG	1 cut(s)	869
Eco81I	CCTNAGG	1 cut(s)	799
Eco88I	CYCGRG	3 cut(s)	854, 947, 1090
EcoICRI	GAGCTC	2 cut(s)	521, 1295
EcoO109I	RGGNCCY	5 cut(s)	370, 976, 1412, 1510, 1560
EcoT14I	CCWWGG	3 cut(s)	894, 1371, 1465
EcoT38I	GRGCYC	3 cut(s)	523, 1297, 1416
ErhI	CCWWGG	3 cut(s)	894, 1371, 1465
FaeI	CATG	8 cut(s)	307, 607, 763, 817, 844, 1375, 1599, 1730
FalI	AAGNNNNNCTT	2 cut(s)	263, 295
FaqI	GGGAC	4 cut(s)	764, 861, 872, 962
FatI	CATG	8 cut(s)	303, 603, 759, 813, 840, 1371, 1595, 1726
FbaI	TGATCA	2 cut(s)	1321, 1723
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	8 cut(s)	351, 444, 447, 755, 827, 936, 1389, 1587
FokI	GGATG	4 cut(s)	445, 1011, 1193, 1288
FriOI	GRGCYC	3 cut(s)	523, 1297, 1416
FseI	GGCCGGCC	1 cut(s)	180
Fsp4HI	GCNGC	8 cut(s)	351, 444, 447, 755, 827, 936, 1389, 1587
FspBI	CTAG	2 cut(s)	1263, 1643
GlaI	GCGC	4 cut(s)	775, 830, 1060, 1392
GluI	GCNGC	8 cut(s)	351, 444, 447, 755, 827, 936, 1389, 1587
GsaI	CCCAGC	3 cut(s)	323, 582, 1143
HapII	CCGG	9 cut(s)	177, 181, 219, 450, 498, 516, 568, 1272, 1622
HgaI	GACGC	7 cut(s)	577, 630, 757, 793, 869, 1109, 1235
HhaI	GCGC	4 cut(s)	776, 831, 1061, 1393
Hin1I	GRCGYC	7 cut(s)	588, 768, 804, 966, 1002, 1101, 1246
Hin1II	CATG	8 cut(s)	307, 607, 763, 817, 844, 1375, 1599, 1730
Hin6I	GCGC	4 cut(s)	774, 829, 1059, 1391
HinP1I	GCGC	4 cut(s)	774, 829, 1059, 1391
HinfI	GANTC	6 cut(s)	534, 821, 890, 902, 942, 1125
HpaII	CCGG	9 cut(s)	177, 181, 219, 450, 498, 516, 568, 1272, 1622
HphI	GGTGA	2 cut(s)	7, 1513
Hpy166II	GTNNAC	2 cut(s)	424, 1350
Hpy188III	TCNNGA	4 cut(s)	376, 604, 727, 1006
Hpy8I	GTNNAC	2 cut(s)	424, 1350
Hpy99I	CGWCG	9 cut(s)	389, 593, 773, 965, 968, 971, 1067, 1103, 1217
HpyAV	CCTTC	2 cut(s)	1129, 1573
HpyCH4III	ACNGT	3 cut(s)	699, 1177, 1362
HpyCH4V	TGCA	9 cut(s)	4, 353, 391, 844, 957, 1173, 1358, 1595, 1697
HpyF10VI	GCNNNNNNNGC	9 cut(s)	296, 760, 823, 832, 841, 850, 1252, 1388, 1592
HpyF3I	CTNAG	7 cut(s)	165, 235, 799, 808, 886, 1338, 1437
Hsp92I	GRCGYC	7 cut(s)	588, 768, 804, 966, 1002, 1101, 1246
Hsp92II	CATG	8 cut(s)	307, 607, 763, 817, 844, 1375, 1599, 1730
HspAI	GCGC	4 cut(s)	774, 829, 1059, 1391
KroI	GCCGGC	1 cut(s)	176
KroNI	GCCGGC	1 cut(s)	178
Ksp22I	TGATCA	2 cut(s)	1321, 1723
Kzo9I	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
LguI	GCTCTTC	2 cut(s)	528, 1400
LmnI	GCTCC	8 cut(s)	222, 347, 443, 518, 616, 738, 1023, 1292
Lsp1109I	GCAGC	4 cut(s)	337, 433, 922, 1573
LweI	GCATC	1 cut(s)	1104
MaeI	CTAG	2 cut(s)	1263, 1643
MaeIII	GTNAC	1 cut(s)	1043
MalI	GATC	7 cut(s)	246, 401, 608, 1233, 1323, 1442, 1725
MboI	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
MflI	RGATCY	2 cut(s)	399, 1440
MhlI	GDGCHC	5 cut(s)	523, 954, 1297, 1416, 1465
MluCI	AATT	6 cut(s)	110, 354, 393, 1581, 1760, 1783
MlyI	GAGTC	4 cut(s)	830, 884, 911, 1134
MmeI	TCCRAC	7 cut(s)	408, 486, 738, 1052, 1165, 1179, 1219
MroNI	GCCGGC	1 cut(s)	176
MseI	TTAA	2 cut(s)	48, 1052
MslI	CAYNNNNRTG	3 cut(s)	335, 1550, 1731
MspA1I	CMGCKG	1 cut(s)	446
MspCI	CTTAAG	1 cut(s)	47
MspI	CCGG	9 cut(s)	177, 181, 219, 450, 498, 516, 568, 1272, 1622
MspR9I	CCNGG	4 cut(s)	220, 499, 1273, 1622
Mva1269I	GAATGC	1 cut(s)	1699
MvnI	CGCG	3 cut(s)	829, 863, 1391
MwoI	GCNNNNNNNGC	9 cut(s)	296, 760, 823, 832, 841, 850, 1252, 1388, 1592
NaeI	GCCGGC	1 cut(s)	178
NciI	CCSGG	4 cut(s)	220, 499, 1273, 1622
NcoI	CCATGG	1 cut(s)	1371
NdeII	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
NgoMIV	GCCGGC	1 cut(s)	176
NlaIII	CATG	8 cut(s)	307, 607, 763, 817, 844, 1375, 1599, 1730
NlaIV	GGNNCC	7 cut(s)	439, 656, 978, 1413, 1414, 1511, 1561
NmeAIII	GCCGAG	2 cut(s)	652, 744
NmuCI	GTSAC	1 cut(s)	1043
PagI	TCATGA	1 cut(s)	603
PceI	AGGCCT	2 cut(s)	231, 1088
PciSI	GCTCTTC	2 cut(s)	528, 1400
PcsI	WCGNNNNNNNCGW	2 cut(s)	1104, 1529
PctI	GAATGC	1 cut(s)	1699
PdiI	GCCGGC	1 cut(s)	178
PfeI	GAWTC	2 cut(s)	534, 942
Pfl23II	CGTACG	1 cut(s)	1383
PflFI	GACNNNGTC	2 cut(s)	965, 1245
PflMI	CCANNNNNTGG	1 cut(s)	1422
PkrI	GCNGC	8 cut(s)	352, 445, 448, 756, 828, 937, 1390, 1588
PleI	GAGTC	4 cut(s)	829, 884, 910, 1133
PmaCI	CACGTG	1 cut(s)	869
PmlI	CACGTG	1 cut(s)	869
PpsI	GAGTC	4 cut(s)	829, 884, 910, 1133
Ppu21I	YACGTR	3 cut(s)	709, 869, 1460
PpuMI	RGGWCCY	3 cut(s)	370, 976, 1510
Psp124BI	GAGCTC	2 cut(s)	523, 1297
Psp5II	RGGWCCY	3 cut(s)	370, 976, 1510
PspCI	CACGTG	1 cut(s)	869
PspFI	CCCAGC	3 cut(s)	319, 578, 1139
PspLI	CGTACG	1 cut(s)	1383
PspN4I	GGNNCC	7 cut(s)	439, 656, 978, 1413, 1414, 1511, 1561
PspOMI	GGGCCC	1 cut(s)	1412
PspPI	GGNCC	7 cut(s)	370, 976, 1412, 1413, 1510, 1560, 1775
PspPPI	RGGWCCY	3 cut(s)	370, 976, 1510
PsuI	RGATCY	2 cut(s)	399, 1440
PsyI	GACNNNGTC	2 cut(s)	965, 1245
RigI	GGCCGGCC	1 cut(s)	180
RsaI	GTAC	5 cut(s)	275, 596, 1115, 1385, 1619
RsaNI	GTAC	5 cut(s)	274, 595, 1114, 1384, 1618
RseI	CAYNNNNRTG	3 cut(s)	335, 1550, 1731
SacI	GAGCTC	2 cut(s)	523, 1297
SapI	GCTCTTC	2 cut(s)	528, 1400
SaqAI	TTAA	2 cut(s)	48, 1052
SatI	GCNGC	8 cut(s)	351, 444, 447, 755, 827, 936, 1389, 1587
Sau3AI	GATC	7 cut(s)	244, 399, 606, 1231, 1321, 1440, 1723
Sau96I	GGNCC	7 cut(s)	370, 976, 1412, 1413, 1510, 1560, 1775
SchI	GAGTC	4 cut(s)	830, 884, 911, 1134
ScrFI	CCNGG	4 cut(s)	220, 499, 1273, 1622
SduI	GDGCHC	5 cut(s)	523, 954, 1297, 1416, 1465
SfaNI	GCATC	1 cut(s)	1104
SfcI	CTRYAG	2 cut(s)	1176, 1471
SinI	GGWCC	3 cut(s)	370, 976, 1510
SmiMI	CAYNNNNRTG	3 cut(s)	335, 1550, 1731
SmlI	CTYRAG	3 cut(s)	19, 47, 374
SmoI	CTYRAG	3 cut(s)	19, 47, 374
Sse9I	AATT	6 cut(s)	110, 354, 393, 1581, 1760, 1783
SseBI	AGGCCT	2 cut(s)	231, 1088
SsiI	CCGC	8 cut(s)	441, 444, 624, 754, 827, 920, 1389, 1754
SspI	AATATT	1 cut(s)	128
SspMI	CTAG	2 cut(s)	1263, 1643
SstI	GAGCTC	2 cut(s)	523, 1297
StuI	AGGCCT	2 cut(s)	231, 1088
StyD4I	CCNGG	4 cut(s)	218, 497, 1271, 1620
StyI	CCWWGG	3 cut(s)	894, 1371, 1465
TaaI	ACNGT	3 cut(s)	699, 1177, 1362
TaqI	TCGA	5 cut(s)	728, 913, 1098, 1704, 1758
TasI	AATT	6 cut(s)	110, 354, 393, 1581, 1760, 1783
TatI	WGTACW	1 cut(s)	1113
TauI	GCSGC	4 cut(s)	446, 757, 829, 1391
TfiI	GAWTC	2 cut(s)	534, 942
Tru1I	TTAA	2 cut(s)	48, 1052
Tru9I	TTAA	2 cut(s)	48, 1052
TscAI	CASTG	3 cut(s)	959, 1180, 1365
TseFI	GTSAC	1 cut(s)	1043
TseI	GCWGC	4 cut(s)	350, 446, 935, 1586
Tsp45I	GTSAC	1 cut(s)	1043
TspDTI	ATGAA	2 cut(s)	1195, 1505
TspGWI	ACGGA	2 cut(s)	1239, 1437
TspRI	CASTG	3 cut(s)	959, 1180, 1365
Tth111I	GACNNNGTC	2 cut(s)	965, 1245
Van91I	CCANNNNNTGG	1 cut(s)	1422
Vha464I	CTTAAG	1 cut(s)	47
VpaK11BI	GGWCC	3 cut(s)	370, 976, 1510
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1724
XmiI	GTMKAC	1 cut(s)	423
XspI	CTAG	2 cut(s)	1263, 1643
ZraI	GACGTC	2 cut(s)	967, 1003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.