Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000765

Physical Location & Seq

Genomic Coordinates Forward (+)

13889473 .. 13893123

Gene Structure 3651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG107500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGGCTGACCGGAGAGCTGAGGAAAATGTCGTCTCCGGCCAACCCACCCAGAAAACCATTGCGAATTTCGATCCCGCACTCAAGCACAAGAGAAACAAGTACGCTTTAGCTTGTGCTACGTTGGCTTCCATGACTTCGATCCTACTCGGTTATGATATTGGTGTAATGAGTGGAGCGGCGATCTTCATCAAAGACGACCTCCATATCTCCGACGTGCAGGTCGAAGTTCTAGTTGGAATTCTGAATCTCTACTCCCTCATCGGATCCGCCGCCGGCGGCAGGACGTCCGACTGGATTGGACGACGGTATACCATAGTCCTCGCCGGAGCCATCTTCTTCGCGGGATCTCTTCTCATGGGCTTCGCCACCAACTACTCGTTCCTCATGTTCGGGAGATTTGTTGCTGGAATCGGCGTCGGTTATGCCCTCATGATTGCTCCTGTCTACACCGCCGAAGTTTCTCCGGCGTCGTCTCGTGGTTTCCTCACGTCTTTTGCTGATTTGTTTATCAATGTCGGAATCTTATTGGGGTACATATCCAACTGGGCCTTTTCCAAGCTCGCACTTAACCTAGGGTGGCGTCTCATGCTTGGCGTCGGCGCCATTCCCTCCGTCTTCCTTGCCATTGGCGTCTTAGCCATGCCGGAATCCCCTCGCTGGCTGGTCATGCAGGGCCGCCTCGGCGACGCCAAGCAAGTCCTCGACCGAACCTCAGACTCCATGGAAGAGTCCAAACTCCGACTCGCCGACATCAAAGAAGCCGCTGGAATCCCCGAACACTGCAACGACGACGTCGTTCAAGTCCCAAAACGCAGCCATGGCGAAGACGTCTGGAAAGGGCTCATCCTCCACCCCACCCCCGCAGTCCGTCACATTCTCATCGCCGCCGTCGGGATGATAGCCTCACTCGGCTGTCTCGGTTTCGGCCTCACCATCATCGACCACAGCAACGAAAAGGTCATGTGGGCCATTGTGCTCTGCATCACCATGGTCTTATTCTACGTCGCTTTCTTCTCCATCGGAATGGGCCCTATCACATGGGTCTACAGCTCCGAGATCTTCCCGTTAAAGCTACGAGCTCAGGGATGTAGTATTGGAGTCGCCGTCAACAGAGTCGCGAGTGGGATAGTCTCAATGACTTTTATATCCCTGTACAAGGCCATAACTATTGGCGGAGCCTTCTTTCTTTACGCCGGAATTGCAGCGGTTGGCTGGGTGTTCTTATGTACAATGCTACCGGAGACACAGGGGAGAACCCTTGAAGATATGGAAGTCCTTTTTGGGAAGTTCCACAAGTGGAAACAGGCCAATGCTCAGGTCAAGAATAAGCAGGCGGATCATAATAGTAATGGAAATAACACCGCCAACGATGGTCGGTTCAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005365 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015146 GO:0015148 GO:0015149 GO:0015166 GO:0015168 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015575 GO:0015576 GO:0015591 GO:0015672 GO:0015749 GO:0015750 GO:0015752 GO:0015753 GO:0015757 GO:0015791 GO:0015793 GO:0015795 GO:0015797 GO:0015798 GO:0015850 GO:0016020 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0042995 GO:0044464 GO:0046323 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090406 GO:0090696 GO:0090697 GO:0090698 GO:0098655 GO:0098660 GO:0098662 GO:0099402 GO:0120025 GO:1901618 GO:1902600 GO:1904659 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

461

Amino Acids

49.88

Weight (kDa)

8.63

Isoelectric Point (pI)

34.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	39 - 253	8.2e-55	Sugar (and other) transporter
MFS_1	PF07690	45 - 332	2.7e-18	Major Facilitator Superfamily
Sugar_tr	PF00083	292 - 427	1.3e-25	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16120 AT2G16130 AT3G18830
fragaria_vesca	FvH4_2g08400 FvH4_2g08400 FvH4_2g08430 FvH4_2g08430 FvH4_2g08430
malus_domestica	MD05G1068600.v1.1 MD05G1068700.v1.1 MD05G1069100.v1.1 MD05G1069700.v1.1 MD10G1078900.v1.1 MD10G1079100.v1.1 MD10G1079200.v1.1 MD10G1079500.v1.1 MD10G1079600.v1.1 MD10G1079700.v1.1 MD10G1079800.v1.1 MD10G1079900.v1.1 MD10G1080000.v1.1 MD10G1080100.v1.1 MD10G1106100.v1.1 MD12G1026200.v1.1 MD17G1247200.v1.1
prunus_persica	Prupe.3G071100_v2.0.a1 Prupe.8G100700_v2.0.a1 Prupe.8G101000_v2.0.a1 Prupe.8G101200_v2.0.a1 Prupe.8G101500_v2.0.a1 Prupe.8G105300_v2.0.a1 Prupe.8G105400_v2.0.a1 Prupe.8G105500_v2.0.a1 Prupe.8G105600_v2.0.a1
pyrus_communis	pycom04g19030 pycom04g19050 pycom04g19090 pycom04g19120 pycom05g05990 pycom05g06030 pycom10g06180 pycom10g06270 pycom10g06280 pycom10g06300 pycom10g06330 pycom10g06340 pycom12g02550 pycom17g26280
rosa_chinensis	RchiOBHm_Chr6g0263471 RchiOBHm_Chr6g0263621 RchiOBHm_Chr6g0263691
rosa_laevigata	RLG00000014328 RLG00000014330
rosa_multiflora	Rmu_co8086996.1_g000001 Rmu_co8446581.1_g000001 Rmu_sc0000565.1_g000052 Rmu_sc0010495.1_g000011
rosa_roxburghii	Rroxscaffold_176G00431110 Rroxscaffold_7G00204150
rosa_rugosa	Rorug06G0005300 Rorug06G0005700
rosa_samantha	Rh6AG124800 Rh6BG120900 Rh6CG119100 Rh6DG107300 Rh6DG107500
rosa_wichuraiana	Rw0G005290 Rw0G005320 Rw6G010850 Rw6G010870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	218
AatII	GACGTC	3 cut(s)	287, 795, 831
Acc36I	ACCTGC	1 cut(s)	208
AccB1I	GGYRCC	1 cut(s)	599
AccBSI	CCGCTC	1 cut(s)	176
AccI	GTMKAC	3 cut(s)	308, 444, 1044
AccII	CGCG	2 cut(s)	341, 1118
AclWI	GGATC	6 cut(s)	65, 133, 258, 271, 352, 1344
AcoI	YGGCCR	1 cut(s)	37
AcsI	RAATTY	2 cut(s)	64, 237
AfaI	GTAC	4 cut(s)	101, 533, 1154, 1228
AfiI	CCNNNNNNNGG	4 cut(s)	279, 657, 891, 1156
AgsI	TTSAA	2 cut(s)	800, 1262
AjiI	CACGTC	2 cut(s)	214, 489
AjuI	GAANNNNNNNTTGG	6 cut(s)	216, 248, 362, 394, 1263, 1295
AluBI	AGCT	6 cut(s)	17, 110, 559, 1050, 1072, 1079
AluI	AGCT	6 cut(s)	17, 110, 559, 1050, 1072, 1079
Alw21I	GWGCWC	2 cut(s)	978, 1081
Alw26I	GTCTC	6 cut(s)	37, 477, 587, 920, 1135, 1235
AlwI	GGATC	6 cut(s)	65, 133, 258, 271, 352, 1344
AoxI	GGCC	8 cut(s)	37, 546, 673, 925, 966, 1027, 1158, 1305
ApaI	GGGCCC	1 cut(s)	1031
ApeKI	GCWGC	2 cut(s)	813, 1202
ApoI	RAATTY	2 cut(s)	64, 237
AspA2I	CCTAGG	1 cut(s)	571
AspLEI	GCGC	1 cut(s)	602
AspS9I	GGNCC	5 cut(s)	546, 673, 966, 1027, 1028
AsuHPI	GGTGA	2 cut(s)	922, 976
AvrII	CCTAGG	1 cut(s)	571
BaeGI	GKGCMC	1 cut(s)	1031
BamHI	GGATCC	1 cut(s)	263
BanI	GGYRCC	1 cut(s)	599
BanII	GRGCYC	3 cut(s)	843, 1031, 1081
BauI	CACGAG	1 cut(s)	474
BbsI	GAAGAC	2 cut(s)	607, 831
Bbv12I	GWGCWC	2 cut(s)	978, 1081
BbvCI	CCTCAGC	1 cut(s)	18
BbvI	GCAGC	2 cut(s)	825, 1214
BccI	CCATC	4 cut(s)	338, 941, 1025, 1364
BceAI	ACGGC	2 cut(s)	872, 1088
BcoDI	GTCTC	6 cut(s)	37, 477, 587, 920, 1135, 1235
BfaI	CTAG	2 cut(s)	230, 572
BfmI	CTRYAG	1 cut(s)	1045
BfoI	RGCGCY	1 cut(s)	603
BfuAI	ACCTGC	1 cut(s)	208
BglI	GCCNNNNNGGC	1 cut(s)	681
BglII	AGATCT	1 cut(s)	1056
BisI	GCNGC	8 cut(s)	177, 270, 277, 676, 762, 814, 885, 1203
BlnI	CCTAGG	1 cut(s)	571
BlsI	GCNGC	8 cut(s)	178, 271, 278, 677, 763, 815, 886, 1204
BmgBI	CACGTC	2 cut(s)	214, 489
BmgT120I	GGNCC	5 cut(s)	546, 673, 966, 1027, 1028
BmiI	GGNNCC	5 cut(s)	265, 328, 601, 1029, 1177
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	1 cut(s)	990
BmuI	ACTGGG	1 cut(s)	553
BpiI	GAAGAC	2 cut(s)	607, 831
Bpu10I	CCTNAGC	3 cut(s)	18, 1080, 1314
BpuEI	CTTGAG	1 cut(s)	65
BsaBI	GATNNNNATC	1 cut(s)	185
BsaJI	CCNNGG	5 cut(s)	571, 679, 720, 817, 987
BsaWI	WCCGGW	2 cut(s)	9, 1237
BsaXI	ACNNNNNCTCC	2 cut(s)	1089, 1119
Bsc4I	CCNNNNNNNGG	4 cut(s)	279, 657, 891, 1156
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	2 cut(s)	296, 548
Bse3DI	GCAATG	1 cut(s)	57
Bse8I	GATNNNNATC	1 cut(s)	185
BseDI	CCNNGG	5 cut(s)	571, 679, 720, 817, 987
BseGI	GGATG	3 cut(s)	843, 900, 1091
BseJI	GATNNNNATC	1 cut(s)	185
BseLI	CCNNNNNNNGG	4 cut(s)	279, 657, 891, 1156
BseMI	GCAATG	1 cut(s)	57
BseMII	CTCAG	4 cut(s)	9, 726, 1094, 1328
BseNI	ACTGG	2 cut(s)	296, 548
BseSI	GKGCMC	1 cut(s)	1031
BseXI	GCAGC	2 cut(s)	825, 1214
BseYI	CCCAGC	1 cut(s)	1212
BsgI	GTGCAG	1 cut(s)	236
Bsh1236I	CGCG	2 cut(s)	341, 1118
Bsh1285I	CGRYCG	1 cut(s)	706
BshFI	GGCC	8 cut(s)	39, 548, 675, 927, 968, 1029, 1160, 1307
BshNI	GGYRCC	1 cut(s)	599
BsiEI	CGRYCG	1 cut(s)	706
BsiHKAI	GWGCWC	2 cut(s)	978, 1081
BsiSI	CCGG	8 cut(s)	10, 36, 273, 324, 464, 644, 1194, 1238
BslFI	GGGAC	1 cut(s)	788
BslI	CCNNNNNNNGG	4 cut(s)	279, 657, 891, 1156
BsmAI	GTCTC	6 cut(s)	37, 477, 587, 920, 1135, 1235
BsmBI	CGTCTC	3 cut(s)	37, 477, 587
BsmFI	GGGAC	1 cut(s)	788
BsnI	GGCC	8 cut(s)	39, 548, 675, 927, 968, 1029, 1160, 1307
Bsp120I	GGGCCC	1 cut(s)	1027
Bsp1286I	GDGCHC	4 cut(s)	843, 978, 1031, 1081
Bsp1407I	TGTACA	2 cut(s)	1152, 1226
Bsp143I	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
Bsp19I	CCATGG	3 cut(s)	720, 817, 987
Bsp68I	TCGCGA	1 cut(s)	1118
BspANI	GGCC	8 cut(s)	39, 548, 675, 927, 968, 1029, 1160, 1307
BspCNI	CTCAG	4 cut(s)	10, 725, 1093, 1327
BspFNI	CGCG	2 cut(s)	341, 1118
BspHI	TCATGA	1 cut(s)	429
BspLI	GGNNCC	5 cut(s)	265, 328, 601, 1029, 1177
BspMI	ACCTGC	1 cut(s)	208
BspPI	GGATC	6 cut(s)	65, 133, 258, 271, 352, 1344
BspT107I	GGYRCC	1 cut(s)	599
BsrBI	CCGCTC	1 cut(s)	176
BsrDI	GCAATG	1 cut(s)	57
BsrFI	RCCGGY	1 cut(s)	272
BsrGI	TGTACA	2 cut(s)	1152, 1226
BsrI	ACTGG	2 cut(s)	296, 548
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	5 cut(s)	571, 679, 720, 817, 987
BssMI	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
BssNAI	GTATAC	1 cut(s)	309
BssSI	CACGAG	1 cut(s)	474
BssT1I	CCWWGG	4 cut(s)	571, 720, 817, 987
Bst1107I	GTATAC	1 cut(s)	309
Bst2BI	CACGAG	1 cut(s)	474
Bst4CI	ACNGT	1 cut(s)	306
Bst6I	CTCTTC	2 cut(s)	354, 720
BstAUI	TGTACA	2 cut(s)	1152, 1226
BstC8I	GCNNGC	4 cut(s)	274, 561, 659, 1332
BstDEI	CTNAG	5 cut(s)	18, 634, 712, 1080, 1314
BstDSI	CCRYGG	3 cut(s)	720, 817, 987
BstENI	CCTNNNNNAGG	1 cut(s)	1154
BstF5I	GGATG	3 cut(s)	843, 900, 1091
BstFNI	CGCG	2 cut(s)	341, 1118
BstH2I	RGCGCY	1 cut(s)	603
BstHHI	GCGC	1 cut(s)	602
BstKTI	GATC	7 cut(s)	73, 141, 183, 266, 347, 1059, 1339
BstMAI	GTCTC	6 cut(s)	37, 477, 587, 920, 1135, 1235
BstMBI	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
BstMCI	CGRYCG	1 cut(s)	706
BstMWI	GCNNNNNNNGC	6 cut(s)	122, 586, 667, 681, 819, 1199
BstSFI	CTRYAG	1 cut(s)	1045
BstSLI	GKGCMC	1 cut(s)	1031
BstUI	CGCG	2 cut(s)	341, 1118
BstV1I	GCAGC	2 cut(s)	825, 1214
BstV2I	GAAGAC	2 cut(s)	607, 831
BstX2I	RGATCY	3 cut(s)	263, 344, 1056
BstXI	CCANNNNNNTGG	1 cut(s)	1024
BstYI	RGATCY	3 cut(s)	263, 344, 1056
BstZ17I	GTATAC	1 cut(s)	309
BsuRI	GGCC	8 cut(s)	39, 548, 675, 927, 968, 1029, 1160, 1307
BtgI	CCRYGG	3 cut(s)	720, 817, 987
BtgZI	GCGATG	1 cut(s)	865
BtrI	CACGTC	2 cut(s)	214, 489
BtsCI	GGATG	3 cut(s)	843, 900, 1091
BtsI	GCAGTG	1 cut(s)	778
BtsIMutI	CAGTG	1 cut(s)	778
BtuMI	TCGCGA	1 cut(s)	1118
BveI	ACCTGC	1 cut(s)	208
Cac8I	GCNNGC	4 cut(s)	274, 561, 659, 1332
CciI	TCATGA	1 cut(s)	429
CfoI	GCGC	1 cut(s)	602
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	5 cut(s)	546, 673, 966, 1027, 1028
CseI	GACGC	6 cut(s)	403, 456, 569, 583, 619, 695
Csp6I	GTAC	4 cut(s)	100, 532, 1153, 1227
CviQI	GTAC	4 cut(s)	100, 532, 1153, 1227
DdeI	CTNAG	5 cut(s)	18, 634, 712, 1080, 1314
DinI	GGCGCC	1 cut(s)	601
DpnI	GATC	7 cut(s)	72, 140, 182, 265, 346, 1058, 1338
DpnII	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
DrdI	GACNNNNNNGTC	1 cut(s)	218
DseDI	GACNNNNNNGTC	1 cut(s)	218
EaeI	YGGCCR	1 cut(s)	37
Eam1104I	CTCTTC	2 cut(s)	354, 720
EarI	CTCTTC	2 cut(s)	354, 720
EciI	GGCGGA	3 cut(s)	256, 1188, 1349
Ecl136II	GAGCTC	1 cut(s)	1079
Eco130I	CCWWGG	4 cut(s)	571, 720, 817, 987
Eco24I	GRGCYC	3 cut(s)	843, 1031, 1081
Eco53kI	GAGCTC	1 cut(s)	1079
EcoICRI	GAGCTC	1 cut(s)	1079
EcoNI	CCTNNNNNAGG	1 cut(s)	1154
EcoO109I	RGGNCCY	1 cut(s)	1028
EcoRI	GAATTC	1 cut(s)	237
EcoT14I	CCWWGG	4 cut(s)	571, 720, 817, 987
EcoT38I	GRGCYC	3 cut(s)	843, 1031, 1081
EgeI	GGCGCC	1 cut(s)	601
EheI	GGCGCC	1 cut(s)	601
ErhI	CCWWGG	4 cut(s)	571, 720, 817, 987
Esp3I	CGTCTC	3 cut(s)	37, 477, 587
FaqI	GGGAC	1 cut(s)	788
FauI	CCCGC	3 cut(s)	82, 334, 868
FblI	GTMKAC	3 cut(s)	308, 444, 1044
Fnu4HI	GCNGC	8 cut(s)	177, 270, 277, 676, 762, 814, 885, 1203
FokI	GGATG	3 cut(s)	830, 907, 1098
FriOI	GRGCYC	3 cut(s)	843, 1031, 1081
Fsp4HI	GCNGC	8 cut(s)	177, 270, 277, 676, 762, 814, 885, 1203
FspBI	CTAG	2 cut(s)	230, 572
GlaI	GCGC	1 cut(s)	601
GluI	GCNGC	8 cut(s)	177, 270, 277, 676, 762, 814, 885, 1203
GsaI	CCCAGC	1 cut(s)	1216
HaeII	RGCGCY	1 cut(s)	603
HaeIII	GGCC	8 cut(s)	39, 548, 675, 927, 968, 1029, 1160, 1307
HapII	CCGG	8 cut(s)	10, 36, 273, 324, 464, 644, 1194, 1238
HgaI	GACGC	6 cut(s)	403, 456, 569, 583, 619, 695
HhaI	GCGC	1 cut(s)	602
Hin6I	GCGC	1 cut(s)	600
HinP1I	GCGC	1 cut(s)	600
HincII	GTYRAC	1 cut(s)	1108
HindII	GTYRAC	1 cut(s)	1108
HpaII	CCGG	8 cut(s)	10, 36, 273, 324, 464, 644, 1194, 1238
HphI	GGTGA	2 cut(s)	922, 976
Hpy166II	GTNNAC	4 cut(s)	309, 445, 1045, 1108
Hpy188I	TCNGA	9 cut(s)	211, 243, 263, 289, 518, 715, 740, 1022, 1054
Hpy188III	TCNNGA	6 cut(s)	391, 430, 832, 892, 1117, 1321
Hpy8I	GTNNAC	4 cut(s)	309, 445, 1045, 1108
HpyAV	CCTTC	1 cut(s)	1189
HpyCH4III	ACNGT	1 cut(s)	306
HpyCH4IV	ACGT	7 cut(s)	119, 213, 284, 488, 792, 828, 1002
HpyCH4V	TGCA	5 cut(s)	217, 670, 783, 981, 1202
HpyF10VI	GCNNNNNNNGC	6 cut(s)	122, 586, 667, 681, 819, 1199
HpyF3I	CTNAG	5 cut(s)	18, 634, 712, 1080, 1314
HpySE526I	ACGT	7 cut(s)	119, 213, 284, 488, 792, 828, 1002
HspAI	GCGC	1 cut(s)	600
KasI	GGCGCC	1 cut(s)	599
KroI	GCCGGC	1 cut(s)	272
KroNI	GCCGGC	1 cut(s)	274
Kzo9I	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
LmnI	GCTCC	5 cut(s)	173, 326, 442, 1055, 1175
Lsp1109I	GCAGC	2 cut(s)	825, 1214
LweI	GCATC	1 cut(s)	990
MaeI	CTAG	2 cut(s)	230, 572
MaeII	ACGT	7 cut(s)	119, 213, 284, 488, 792, 828, 1002
MaeIII	GTNAC	1 cut(s)	869
MalI	GATC	7 cut(s)	72, 140, 182, 265, 346, 1058, 1338
MbiI	CCGCTC	1 cut(s)	176
MboI	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
MflI	RGATCY	3 cut(s)	263, 344, 1056
MhlI	GDGCHC	4 cut(s)	843, 978, 1031, 1081
MluCI	AATT	3 cut(s)	64, 237, 1197
Mly113I	GGCGCC	1 cut(s)	600
MlyI	GAGTC	5 cut(s)	710, 735, 737, 1107, 1122
MmeI	TCCRAC	6 cut(s)	214, 234, 312, 496, 564, 763
MreI	CGCCGGCG	1 cut(s)	272
MroNI	GCCGGC	1 cut(s)	272
MseI	TTAA	2 cut(s)	567, 1067
MslI	CAYNNNNRTG	2 cut(s)	986, 1022
MspA1I	CMGCKG	2 cut(s)	764, 1205
MspI	CCGG	8 cut(s)	10, 36, 273, 324, 464, 644, 1194, 1238
MvnI	CGCG	2 cut(s)	341, 1118
MwoI	GCNNNNNNNGC	6 cut(s)	122, 586, 667, 681, 819, 1199
NaeI	GCCGGC	1 cut(s)	274
NarI	GGCGCC	1 cut(s)	600
NcoI	CCATGG	3 cut(s)	720, 817, 987
NdeII	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
NgoMIV	GCCGGC	1 cut(s)	272
NlaIV	GGNNCC	5 cut(s)	265, 328, 601, 1029, 1177
NmeAIII	GCCGAG	2 cut(s)	660, 888
NmuCI	GTSAC	1 cut(s)	869
NruI	TCGCGA	1 cut(s)	1118
PagI	TCATGA	1 cut(s)	429
PcsI	WCGNNNNNNNCGW	2 cut(s)	219, 792
PdiI	GCCGGC	1 cut(s)	274
PfeI	GAWTC	5 cut(s)	244, 408, 519, 647, 768
PflFI	GACNNNGTC	1 cut(s)	791
PkrI	GCNGC	8 cut(s)	178, 271, 278, 677, 763, 815, 886, 1204
PleI	GAGTC	5 cut(s)	710, 735, 736, 1106, 1121
PluTI	GGCGCC	1 cut(s)	603
PpsI	GAGTC	5 cut(s)	710, 735, 736, 1106, 1121
Psp124BI	GAGCTC	1 cut(s)	1081
PspFI	CCCAGC	1 cut(s)	1212
PspN4I	GGNNCC	5 cut(s)	265, 328, 601, 1029, 1177
PspOMI	GGGCCC	1 cut(s)	1027
PspPI	GGNCC	5 cut(s)	546, 673, 966, 1027, 1028
PsuI	RGATCY	3 cut(s)	263, 344, 1056
PsyI	GACNNNGTC	1 cut(s)	791
RruI	TCGCGA	1 cut(s)	1118
RsaI	GTAC	4 cut(s)	101, 533, 1154, 1228
RsaNI	GTAC	4 cut(s)	100, 532, 1153, 1227
RseI	CAYNNNNRTG	2 cut(s)	986, 1022
SacI	GAGCTC	1 cut(s)	1081
SaqAI	TTAA	2 cut(s)	567, 1067
SatI	GCNGC	8 cut(s)	177, 270, 277, 676, 762, 814, 885, 1203
Sau3AI	GATC	7 cut(s)	70, 138, 180, 263, 344, 1056, 1336
Sau96I	GGNCC	5 cut(s)	546, 673, 966, 1027, 1028
SchI	GAGTC	5 cut(s)	710, 735, 737, 1107, 1122
SduI	GDGCHC	4 cut(s)	843, 978, 1031, 1081
SfaNI	GCATC	1 cut(s)	990
SfcI	CTRYAG	1 cut(s)	1045
SfoI	GGCGCC	1 cut(s)	601
SgrAI	CRCCGGYG	1 cut(s)	272
SmiMI	CAYNNNNRTG	2 cut(s)	986, 1022
SmlI	CTYRAG	1 cut(s)	80
SmoI	CTYRAG	1 cut(s)	80
Sse9I	AATT	3 cut(s)	64, 237, 1197
SspDI	GGCGCC	1 cut(s)	599
SspMI	CTAG	2 cut(s)	230, 572
SstI	GAGCTC	1 cut(s)	1081
StyI	CCWWGG	4 cut(s)	571, 720, 817, 987
TaaI	ACNGT	1 cut(s)	306
TaiI	ACGT	7 cut(s)	122, 216, 287, 491, 795, 831, 1005
TaqI	TCGA	5 cut(s)	69, 137, 222, 702, 939
TaqII	GACCGA	1 cut(s)	720
TasI	AATT	3 cut(s)	64, 237, 1197
TatI	WGTACW	2 cut(s)	1152, 1226
TauI	GCSGC	6 cut(s)	179, 272, 279, 678, 764, 887
TfiI	GAWTC	5 cut(s)	244, 408, 519, 647, 768
Tru1I	TTAA	2 cut(s)	567, 1067
Tru9I	TTAA	2 cut(s)	567, 1067
TscAI	CASTG	1 cut(s)	785
TseFI	GTSAC	1 cut(s)	869
TseI	GCWGC	2 cut(s)	813, 1202
Tsp45I	GTSAC	1 cut(s)	869
TspDTI	ATGAA	1 cut(s)	175
TspGWI	ACGGA	2 cut(s)	601, 857
TspRI	CASTG	1 cut(s)	785
Tth111I	GACNNNGTC	1 cut(s)	791
XagI	CCTNNNNNAGG	1 cut(s)	1154
XapI	RAATTY	2 cut(s)	64, 237
XmaJI	CCTAGG	1 cut(s)	571
XmiI	GTMKAC	3 cut(s)	308, 444, 1044
XspI	CTAG	2 cut(s)	230, 572
ZraI	GACGTC	3 cut(s)	285, 793, 829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.