Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0000765

Physical Location & Seq

Genomic Coordinates Reverse (-)

11592693 .. 11595756

Gene Structure 3064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1079700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGAGATGACTGACCGGAGAGCTGAAGATAAGACCATCACCGGCCAAGCCCAAAACACGAGTATCGCAGACTTTGATCCCCCAAAGAAAGCCAAGACAAAGAAGTTTGCCATTGCCTGTGGCGTTTTGGCTTCAATGACTTCAATCTTACTTGGTTATGATATTGGTGTAATGAGTGGAGCGTCACTCTTCATTAAAGAAAACCTCAAAATCAGTGATGTTCAAGTCGAAATTATGAACGGTACTTTGAACCTCTACTCCCTTATTGGCTCCGCCTTGGCTGGTAGAACCTCCGACTGGATTGGACGCCGGTACACCATAGTACTTGCCGGAACAATCTTCTTTATTGGAGCTCTCCTCATGGGCTTTGCCCCTAACTACGCCTTCCTCATGTTCGGGCGATTTGTTGCCGGAGTTGGAGTTGGCTACGCTCTTATGATAGCTCCCGTCTACACTGCCGAGATCTCTCCGGCCTCGTTTCGTGGCTTCCTCACATCTTTTCCCGAGGTGTTTGTTAATATTGGCATATTACTGGGGTACGTATCCAACTATGCCTTCTCCAAGCTCCCCATTCACTTGAACTGGAGGATCATGCTCGGTGTCGGCGCATTTCCATCTGTTATTCTTGCCGTCGGTGTCTTAGCCATGCCCGAGTCACCTCGTTGGCTCGTCATGCAAGGGCGACTTGGAGACGCCAAGCGAGTTCTACAAAAAACCTCAGAATCCATAGAAGAGTGTCAGCTCAGACTAGATGACATCAAAGAAGCCGCAGGAATCCCCAAAGAGTCCAACGACGACGTTGTTCAGGTATCTAAACGCAGCCACGGTGAAGGCGTGTGGAAAGAATTGCTCCTTCATCCCACACCAGCCGTTCGCCATATTTTAATCGCAGCTCTTGGTATCCACTTCTTTGAACAATCGTCAGGTATAGACTCTGTCGTTTTGTACAGCCCCAGGATCTTCGAAAAGGCAGGAATCACCTCCTACGATCACAAGCTGCTCGCAACGGTGGCTGTTGGAGTTGTCAAGACTATTTGCATCTTAGTCGCCACGGTTTTCCTTGATAAGTTTGGAAGGCGTCCTTTGCTTTTGACTAGCGTGGCTGGAATGGTATTTTCACTTAGCTGTCTCGGTGCAAGCCTTACGATCGTTGATCAACAGCACGGAAAGATCATGTGGGCCATCGTGTTGTGCATCACCATGGTATTACTTAACGTTGCGTTTTTCTCCATCGGGCTGGGGCCGATTACATGGGTCTACAGCTCCGAGATCTTCCCACTGCAGCTGCGCGCGCAAGGGTGTAGTATGGGAGTGGCCGTAAATAGGGTGACGAGTGGGGTCATCTCCATGACTTTTATTTCATTGTATAAGGCCATCACGATTGGGGGAGCCTTCTTTCTTTACGCGGGAATTGCTGCGGTTGGTTGGGTCTTCTTTTATATGTTGTACCCAGAGACACAGGGCCGAACCCTTGAAGATATGGAGGTATTGTTTGGTAAATACCATAAGTGGAGAGAAGCAAATGCCTTGCTTCAGAAAGCTAAGCAAGTTGATGGCGACGACAAGGGTCAAGTCCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005365 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015146 GO:0015148 GO:0015149 GO:0015166 GO:0015168 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015575 GO:0015576 GO:0015591 GO:0015672 GO:0015749 GO:0015750 GO:0015752 GO:0015753 GO:0015757 GO:0015791 GO:0015793 GO:0015795 GO:0015797 GO:0015798 GO:0015850 GO:0016020 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0042995 GO:0044464 GO:0046323 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090406 GO:0090696 GO:0090697 GO:0090698 GO:0098655 GO:0098660 GO:0098662 GO:0099402 GO:0120025 GO:1901618 GO:1902600 GO:1904659 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

527

Amino Acids

57.43

Weight (kDa)

8.82

Isoelectric Point (pI)

38.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	42 - 498	3.2e-105	Sugar (and other) transporter
MFS_1	PF07690	47 - 439	9e-29	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16120 AT2G16130 AT3G18830
fragaria_vesca	FvH4_2g08400 FvH4_2g08400 FvH4_2g08430 FvH4_2g08430 FvH4_2g08430
malus_domestica	MD05G1068600.v1.1 MD05G1068700.v1.1 MD05G1069100.v1.1 MD05G1069700.v1.1 MD10G1078900.v1.1 MD10G1079100.v1.1 MD10G1079200.v1.1 MD10G1079500.v1.1 MD10G1079600.v1.1 MD10G1079700.v1.1 MD10G1079800.v1.1 MD10G1079900.v1.1 MD10G1080000.v1.1 MD10G1080100.v1.1 MD10G1106100.v1.1 MD12G1026200.v1.1 MD17G1247200.v1.1
prunus_persica	Prupe.3G071100_v2.0.a1 Prupe.8G100700_v2.0.a1 Prupe.8G101000_v2.0.a1 Prupe.8G101200_v2.0.a1 Prupe.8G101500_v2.0.a1 Prupe.8G105300_v2.0.a1 Prupe.8G105400_v2.0.a1 Prupe.8G105500_v2.0.a1 Prupe.8G105600_v2.0.a1
pyrus_communis	pycom04g19030 pycom04g19050 pycom04g19090 pycom04g19120 pycom05g05990 pycom05g06030 pycom10g06180 pycom10g06270 pycom10g06280 pycom10g06300 pycom10g06330 pycom10g06340 pycom12g02550 pycom17g26280
rosa_chinensis	RchiOBHm_Chr6g0263471 RchiOBHm_Chr6g0263621 RchiOBHm_Chr6g0263691
rosa_laevigata	RLG00000014328 RLG00000014330
rosa_multiflora	Rmu_co8086996.1_g000001 Rmu_co8446581.1_g000001 Rmu_sc0000565.1_g000052 Rmu_sc0010495.1_g000011
rosa_roxburghii	Rroxscaffold_176G00431110 Rroxscaffold_7G00204150
rosa_rugosa	Rorug06G0005300 Rorug06G0005700
rosa_samantha	Rh6AG124800 Rh6BG120900 Rh6CG119100 Rh6DG107300 Rh6DG107500
rosa_wichuraiana	Rw0G005290 Rw0G005320 Rw6G010850 Rw6G010870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	450, 1257
AccII	CGCG	3 cut(s)	1290, 1292, 1406
AciI	CCGC	4 cut(s)	273, 768, 1406, 1418
AclI	AACGTT	1 cut(s)	1215
AclWI	GGATC	3 cut(s)	71, 596, 965
AcoI	YGGCCR	2 cut(s)	43, 1314
AcuI	CTGAAG	2 cut(s)	45, 1517
AcyI	GRCGYC	3 cut(s)	307, 693, 1078
AfaI	GTAC	6 cut(s)	244, 314, 324, 539, 947, 1448
AfiI	CCNNNNNNNGG	2 cut(s)	297, 1323
AgsI	TTSAA	7 cut(s)	135, 144, 224, 250, 580, 914, 1475
AjnI	CCWGG	1 cut(s)	953
AjuI	GAANNNNNNNTTGG	2 cut(s)	539, 571
AloI	GAACNNNNNNTCC	2 cut(s)	242, 274
Alw21I	GWGCWC	1 cut(s)	355
Alw26I	GTCTC	3 cut(s)	684, 1133, 1448
AlwI	GGATC	3 cut(s)	71, 596, 965
Ama87I	CYCGRG	2 cut(s)	503, 650
AoxI	GGCC	7 cut(s)	43, 471, 1179, 1241, 1314, 1371, 1462
ApeKI	GCWGC	6 cut(s)	819, 890, 997, 1282, 1285, 1415
AspLEI	GCGC	4 cut(s)	608, 1290, 1292, 1294
AspS9I	GGNCC	3 cut(s)	1179, 1241, 1462
AsuHPI	GGTGA	6 cut(s)	31, 648, 839, 970, 1189, 1339
AsuII	TTCGAA	1 cut(s)	963
AvaI	CYCGRG	2 cut(s)	503, 650
BaeI	ACNNNNGTAYC	2 cut(s)	46, 79
BanII	GRGCYC	1 cut(s)	355
BauI	CACGAG	1 cut(s)	58
BbsI	GAAGAC	1 cut(s)	1423
Bbv12I	GWGCWC	1 cut(s)	355
BbvI	GCAGC	6 cut(s)	831, 902, 984, 1272, 1294, 1402
BccI	CCATC	6 cut(s)	44, 622, 1190, 1238, 1382, 1547
BceAI	ACGGC	3 cut(s)	614, 854, 1301
BcgI	CGANNNNNNTGC	2 cut(s)	1027, 1061
BciT130I	CCWGG	1 cut(s)	955
BciVI	GTATCC	2 cut(s)	553, 911
BclI	TGATCA	1 cut(s)	1153
BcoDI	GTCTC	3 cut(s)	684, 1133, 1448
BfaI	CTAG	3 cut(s)	749, 1095, 1579
BfmI	CTRYAG	2 cut(s)	1258, 1280
BfuI	GTATCC	2 cut(s)	553, 911
BglII	AGATCT	2 cut(s)	462, 1269
BisI	GCNGC	7 cut(s)	768, 820, 891, 998, 1283, 1286, 1416
BlpI	GCTNAGC	1 cut(s)	1542
BlsI	GCNGC	7 cut(s)	769, 821, 892, 999, 1284, 1287, 1417
BmcAI	AGTACT	1 cut(s)	324
Bme1390I	CCNGG	1 cut(s)	955
BmeT110I	CYCGRG	2 cut(s)	503, 650
BmgT120I	GGNCC	3 cut(s)	1179, 1241, 1462
BmiI	GGNNCC	3 cut(s)	271, 1242, 1390
BmrFI	CCNGG	1 cut(s)	955
BmrI	ACTGGG	1 cut(s)	542
BmsI	GCATC	2 cut(s)	1047, 1203
BmuI	ACTGGG	1 cut(s)	542
BoxI	GACNNNNGTC	1 cut(s)	1566
BpiI	GAAGAC	1 cut(s)	1423
BplI	GAGNNNNNCTC	4 cut(s)	171, 203, 342, 374
BpmI	CTGGAG	1 cut(s)	604
Bpu1102I	GCTNAGC	1 cut(s)	1542
Bpu14I	TTCGAA	1 cut(s)	963
BsaAI	YACGTR	1 cut(s)	541
BsaHI	GRCGYC	3 cut(s)	307, 693, 1078
BsaJI	CCNNGG	6 cut(s)	276, 504, 823, 953, 1050, 1200
BsaWI	WCCGGW	1 cut(s)	15
BsaXI	ACNNNNNCTCC	8 cut(s)	242, 272, 405, 435, 1302, 1332, 1475, 1505
Bsc4I	CCNNNNNNNGG	2 cut(s)	297, 1323
Bse118I	RCCGGY	2 cut(s)	41, 309
Bse1I	ACTGG	3 cut(s)	302, 537, 587
Bse3DI	GCAATG	1 cut(s)	111
BseBI	CCWGG	1 cut(s)	955
BseDI	CCNNGG	6 cut(s)	276, 504, 823, 953, 1050, 1200
BseGI	GGATG	1 cut(s)	856
BseLI	CCNNNNNNNGG	2 cut(s)	297, 1323
BseMI	GCAATG	1 cut(s)	111
BseMII	CTCAG	2 cut(s)	732, 757
BseNI	ACTGG	3 cut(s)	302, 537, 587
BsePI	GCGCGC	2 cut(s)	1288, 1290
BseRI	GAGGAG	1 cut(s)	347
BseXI	GCAGC	6 cut(s)	831, 902, 984, 1272, 1294, 1402
BseYI	CCCAGC	1 cut(s)	1237
Bsh1236I	CGCG	3 cut(s)	1290, 1292, 1406
Bsh1285I	CGRYCG	1 cut(s)	1149
BshFI	GGCC	7 cut(s)	45, 473, 1181, 1243, 1316, 1373, 1464
BsiEI	CGRYCG	1 cut(s)	1149
BsiHKAI	GWGCWC	1 cut(s)	355
BsiHKCI	CYCGRG	2 cut(s)	503, 650
BsiSI	CCGG	6 cut(s)	16, 42, 310, 330, 411, 470
BslI	CCNNNNNNNGG	2 cut(s)	297, 1323
BsmAI	GTCTC	3 cut(s)	684, 1133, 1448
BsmBI	CGTCTC	1 cut(s)	684
BsnI	GGCC	7 cut(s)	45, 473, 1181, 1243, 1316, 1373, 1464
BsoBI	CYCGRG	2 cut(s)	503, 650
Bsp119I	TTCGAA	1 cut(s)	963
Bsp1286I	GDGCHC	1 cut(s)	355
Bsp1407I	TGTACA	1 cut(s)	945
Bsp143I	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
Bsp1720I	GCTNAGC	1 cut(s)	1542
Bsp19I	CCATGG	1 cut(s)	1200
BspACI	CCGC	4 cut(s)	273, 768, 1406, 1418
BspANI	GGCC	7 cut(s)	45, 473, 1181, 1243, 1316, 1373, 1464
BspCNI	CTCAG	2 cut(s)	731, 756
BspFNI	CGCG	3 cut(s)	1290, 1292, 1406
BspLI	GGNNCC	3 cut(s)	271, 1242, 1390
BspMAI	CTGCAG	1 cut(s)	1284
BspPI	GGATC	3 cut(s)	71, 596, 965
BspT104I	TTCGAA	1 cut(s)	963
BsrDI	GCAATG	1 cut(s)	111
BsrFI	RCCGGY	2 cut(s)	41, 309
BsrGI	TGTACA	1 cut(s)	945
BsrI	ACTGG	3 cut(s)	302, 537, 587
BssAI	RCCGGY	2 cut(s)	41, 309
BssECI	CCNNGG	6 cut(s)	276, 504, 823, 953, 1050, 1200
BssHII	GCGCGC	2 cut(s)	1288, 1290
BssMI	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
BssNI	GRCGYC	3 cut(s)	307, 693, 1078
BssSI	CACGAG	1 cut(s)	58
BssT1I	CCWWGG	2 cut(s)	276, 1200
Bst2BI	CACGAG	1 cut(s)	58
Bst2UI	CCWGG	1 cut(s)	955
Bst4CI	ACNGT	4 cut(s)	242, 827, 1009, 1054
Bst6I	CTCTTC	2 cut(s)	194, 726
BstACI	GRCGYC	3 cut(s)	307, 693, 1078
BstAUI	TGTACA	1 cut(s)	945
BstBAI	YACGTR	1 cut(s)	541
BstBI	TTCGAA	1 cut(s)	963
BstC8I	GCNNGC	4 cut(s)	1002, 1138, 1290, 1292
BstDEI	CTNAG	6 cut(s)	640, 718, 743, 1042, 1121, 1542
BstDSI	CCRYGG	3 cut(s)	823, 1050, 1200
BstF5I	GGATG	1 cut(s)	856
BstFNI	CGCG	3 cut(s)	1290, 1292, 1406
BstHHI	GCGC	4 cut(s)	608, 1290, 1292, 1294
BstKTI	GATC	9 cut(s)	79, 465, 591, 960, 991, 1149, 1156, 1173, 1272
BstMAI	GTCTC	3 cut(s)	684, 1133, 1448
BstMBI	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
BstMCI	CGRYCG	1 cut(s)	1149
BstMWI	GCNNNNNNNGC	5 cut(s)	673, 1010, 1084, 1291, 1412
BstNI	CCWGG	1 cut(s)	955
BstPAI	GACNNNNGTC	1 cut(s)	1566
BstSCI	CCNGG	1 cut(s)	953
BstSFI	CTRYAG	2 cut(s)	1258, 1280
BstSNI	TACGTA	1 cut(s)	541
BstUI	CGCG	3 cut(s)	1290, 1292, 1406
BstV1I	GCAGC	6 cut(s)	831, 902, 984, 1272, 1294, 1402
BstV2I	GAAGAC	1 cut(s)	1423
BstX2I	RGATCY	3 cut(s)	462, 957, 1269
BstXI	CCANNNNNNTGG	1 cut(s)	1237
BstYI	RGATCY	3 cut(s)	462, 957, 1269
BsuI	GTATCC	2 cut(s)	553, 911
BsuRI	GGCC	7 cut(s)	45, 473, 1181, 1243, 1316, 1373, 1464
BtgI	CCRYGG	3 cut(s)	823, 1050, 1200
BtsCI	GGATG	1 cut(s)	856
BtsI	GCAGTG	2 cut(s)	453, 1277
BtsIMutI	CAGTG	3 cut(s)	220, 453, 1277
Cac8I	GCNNGC	4 cut(s)	1002, 1138, 1290, 1292
CfoI	GCGC	4 cut(s)	608, 1290, 1292, 1294
Cfr10I	RCCGGY	2 cut(s)	41, 309
Cfr13I	GGNCC	3 cut(s)	1179, 1241, 1462
CseI	GACGC	4 cut(s)	171, 315, 701, 1067
Csp6I	GTAC	6 cut(s)	243, 313, 323, 538, 946, 1447
CviAII	CATG	9 cut(s)	361, 391, 592, 646, 673, 1174, 1201, 1251, 1348
CviQI	GTAC	6 cut(s)	243, 313, 323, 538, 946, 1447
DdeI	CTNAG	6 cut(s)	640, 718, 743, 1042, 1121, 1542
DpnI	GATC	9 cut(s)	78, 464, 590, 959, 990, 1148, 1155, 1172, 1271
DpnII	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
EaeI	YGGCCR	2 cut(s)	43, 1314
Eam1104I	CTCTTC	2 cut(s)	194, 726
EarI	CTCTTC	2 cut(s)	194, 726
EciI	GGCGGA	1 cut(s)	262
Ecl136II	GAGCTC	1 cut(s)	353
Eco105I	TACGTA	1 cut(s)	541
Eco130I	CCWWGG	2 cut(s)	276, 1200
Eco24I	GRGCYC	1 cut(s)	355
Eco53kI	GAGCTC	1 cut(s)	353
Eco57I	CTGAAG	2 cut(s)	45, 1517
Eco88I	CYCGRG	2 cut(s)	503, 650
EcoICRI	GAGCTC	1 cut(s)	353
EcoRII	CCWGG	1 cut(s)	953
EcoT14I	CCWWGG	2 cut(s)	276, 1200
EcoT38I	GRGCYC	1 cut(s)	355
ErhI	CCWWGG	2 cut(s)	276, 1200
Esp3I	CGTCTC	1 cut(s)	684
FaeI	CATG	9 cut(s)	364, 394, 595, 649, 676, 1177, 1204, 1254, 1351
FalI	AAGNNNNNCTT	4 cut(s)	669, 701, 1066, 1098
FatI	CATG	9 cut(s)	360, 390, 591, 645, 672, 1173, 1200, 1250, 1347
FauI	CCCGC	1 cut(s)	1399
FbaI	TGATCA	1 cut(s)	1153
FblI	GTMKAC	2 cut(s)	450, 1257
Fnu4HI	GCNGC	7 cut(s)	768, 820, 891, 998, 1283, 1286, 1416
FokI	GGATG	1 cut(s)	843
FriOI	GRGCYC	1 cut(s)	355
Fsp4HI	GCNGC	7 cut(s)	768, 820, 891, 998, 1283, 1286, 1416
FspBI	CTAG	3 cut(s)	749, 1095, 1579
GlaI	GCGC	4 cut(s)	607, 1289, 1291, 1293
GluI	GCNGC	7 cut(s)	768, 820, 891, 998, 1283, 1286, 1416
GsaI	CCCAGC	1 cut(s)	1241
GsuI	CTGGAG	1 cut(s)	604
HaeIII	GGCC	7 cut(s)	45, 473, 1181, 1243, 1316, 1373, 1464
HapII	CCGG	6 cut(s)	16, 42, 310, 330, 411, 470
HgaI	GACGC	4 cut(s)	171, 315, 701, 1067
HhaI	GCGC	4 cut(s)	608, 1290, 1292, 1294
Hin1I	GRCGYC	3 cut(s)	307, 693, 1078
Hin1II	CATG	9 cut(s)	364, 394, 595, 649, 676, 1177, 1204, 1254, 1351
Hin6I	GCGC	4 cut(s)	606, 1288, 1290, 1292
HinP1I	GCGC	4 cut(s)	606, 1288, 1290, 1292
HinfI	GANTC	6 cut(s)	653, 722, 774, 785, 932, 975
HpaII	CCGG	6 cut(s)	16, 42, 310, 330, 411, 470
HphI	GGTGA	6 cut(s)	31, 648, 839, 970, 1189, 1339
Hpy166II	GTNNAC	4 cut(s)	315, 451, 1258, 1576
Hpy188I	TCNGA	5 cut(s)	295, 721, 746, 1267, 1536
Hpy188III	TCNNGA	3 cut(s)	503, 1027, 1378
Hpy8I	GTNNAC	4 cut(s)	315, 451, 1258, 1576
Hpy99I	CGWCG	4 cut(s)	635, 797, 800, 1562
HpyAV	CCTTC	6 cut(s)	394, 565, 824, 863, 1068, 1402
HpyCH4III	ACNGT	4 cut(s)	242, 827, 1009, 1054
HpyCH4IV	ACGT	3 cut(s)	540, 798, 1215
HpyCH4V	TGCA	5 cut(s)	676, 1038, 1136, 1194, 1282
HpyF10VI	GCNNNNNNNGC	5 cut(s)	673, 1010, 1084, 1291, 1412
HpyF3I	CTNAG	6 cut(s)	640, 718, 743, 1042, 1121, 1542
HpySE526I	ACGT	3 cut(s)	540, 798, 1215
Hsp92I	GRCGYC	3 cut(s)	307, 693, 1078
Hsp92II	CATG	9 cut(s)	364, 394, 595, 649, 676, 1177, 1204, 1254, 1351
HspAI	GCGC	4 cut(s)	606, 1288, 1290, 1292
Ksp22I	TGATCA	1 cut(s)	1153
Kzo9I	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
LmnI	GCTCC	8 cut(s)	179, 275, 350, 448, 570, 855, 1268, 1388
Lsp1109I	GCAGC	6 cut(s)	831, 902, 984, 1272, 1294, 1402
LweI	GCATC	2 cut(s)	1047, 1203
MaeI	CTAG	3 cut(s)	749, 1095, 1579
MaeII	ACGT	3 cut(s)	540, 798, 1215
MaeIII	GTNAC	3 cut(s)	183, 654, 1327
MalI	GATC	9 cut(s)	78, 464, 590, 959, 990, 1148, 1155, 1172, 1271
MboI	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
MboII	GAAGA	8 cut(s)	38, 181, 331, 743, 952, 1264, 1423, 1487
MflI	RGATCY	3 cut(s)	462, 957, 1269
MhlI	GDGCHC	1 cut(s)	355
MluCI	AATT	3 cut(s)	231, 845, 1410
MlyI	GAGTC	3 cut(s)	662, 794, 926
MmeI	TCCRAC	5 cut(s)	318, 397, 570, 813, 997
MseI	TTAA	4 cut(s)	195, 516, 884, 1212
MslI	CAYNNNNRTG	2 cut(s)	1199, 1346
MspA1I	CMGCKG	1 cut(s)	1285
MspI	CCGG	6 cut(s)	16, 42, 310, 330, 411, 470
MspR9I	CCNGG	1 cut(s)	955
MvaI	CCWGG	1 cut(s)	955
MvnI	CGCG	3 cut(s)	1290, 1292, 1406
MwoI	GCNNNNNNNGC	5 cut(s)	673, 1010, 1084, 1291, 1412
NcoI	CCATGG	1 cut(s)	1200
NdeII	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
NlaIII	CATG	9 cut(s)	364, 394, 595, 649, 676, 1177, 1204, 1254, 1351
NlaIV	GGNNCC	3 cut(s)	271, 1242, 1390
NmeAIII	GCCGAG	1 cut(s)	484
NmuCI	GTSAC	3 cut(s)	183, 654, 1327
NspV	TTCGAA	1 cut(s)	963
PauI	GCGCGC	2 cut(s)	1288, 1290
PcsI	WCGNNNNNNNCGW	1 cut(s)	831
PfeI	GAWTC	3 cut(s)	722, 774, 975
PflFI	GACNNNGTC	1 cut(s)	935
PkrI	GCNGC	7 cut(s)	769, 821, 892, 999, 1284, 1287, 1417
Ple19I	CGATCG	1 cut(s)	1149
PleI	GAGTC	3 cut(s)	661, 793, 926
PpsI	GAGTC	3 cut(s)	661, 793, 926
Ppu21I	YACGTR	1 cut(s)	541
PshAI	GACNNNNGTC	1 cut(s)	1566
Psp124BI	GAGCTC	1 cut(s)	355
Psp1406I	AACGTT	1 cut(s)	1215
Psp6I	CCWGG	1 cut(s)	953
PspFI	CCCAGC	1 cut(s)	1237
PspGI	CCWGG	1 cut(s)	953
PspN4I	GGNNCC	3 cut(s)	271, 1242, 1390
PspPI	GGNCC	3 cut(s)	1179, 1241, 1462
PstI	CTGCAG	1 cut(s)	1284
PsuI	RGATCY	3 cut(s)	462, 957, 1269
PsyI	GACNNNGTC	1 cut(s)	935
PteI	GCGCGC	2 cut(s)	1288, 1290
PvuI	CGATCG	1 cut(s)	1149
PvuII	CAGCTG	1 cut(s)	1285
RsaI	GTAC	6 cut(s)	244, 314, 324, 539, 947, 1448
RsaNI	GTAC	6 cut(s)	243, 313, 323, 538, 946, 1447
RseI	CAYNNNNRTG	2 cut(s)	1199, 1346
SacI	GAGCTC	1 cut(s)	355
SaqAI	TTAA	4 cut(s)	195, 516, 884, 1212
SatI	GCNGC	7 cut(s)	768, 820, 891, 998, 1283, 1286, 1416
Sau3AI	GATC	9 cut(s)	76, 462, 588, 957, 988, 1146, 1153, 1170, 1269
Sau96I	GGNCC	3 cut(s)	1179, 1241, 1462
ScaI	AGTACT	1 cut(s)	324
SchI	GAGTC	3 cut(s)	662, 794, 926
ScrFI	CCNGG	1 cut(s)	955
SduI	GDGCHC	1 cut(s)	355
SfaNI	GCATC	2 cut(s)	1047, 1203
SfcI	CTRYAG	2 cut(s)	1258, 1280
SfuI	TTCGAA	1 cut(s)	963
SmiMI	CAYNNNNRTG	2 cut(s)	1199, 1346
SnaBI	TACGTA	1 cut(s)	541
Sse9I	AATT	3 cut(s)	231, 845, 1410
SsiI	CCGC	4 cut(s)	273, 768, 1406, 1418
SspI	AATATT	1 cut(s)	520
SspMI	CTAG	3 cut(s)	749, 1095, 1579
SstI	GAGCTC	1 cut(s)	355
StyD4I	CCNGG	1 cut(s)	953
StyI	CCWWGG	2 cut(s)	276, 1200
TaaI	ACNGT	4 cut(s)	242, 827, 1009, 1054
TaiI	ACGT	3 cut(s)	543, 801, 1218
TaqI	TCGA	2 cut(s)	228, 963
TasI	AATT	3 cut(s)	231, 845, 1410
TatI	WGTACW	2 cut(s)	322, 945
TauI	GCSGC	1 cut(s)	770
TfiI	GAWTC	3 cut(s)	722, 774, 975
Tru1I	TTAA	4 cut(s)	195, 516, 884, 1212
Tru9I	TTAA	4 cut(s)	195, 516, 884, 1212
TscAI	CASTG	3 cut(s)	220, 460, 1284
TseFI	GTSAC	3 cut(s)	183, 654, 1327
TseI	GCWGC	6 cut(s)	819, 890, 997, 1282, 1285, 1415
Tsp45I	GTSAC	3 cut(s)	183, 654, 1327
TspDTI	ATGAA	4 cut(s)	181, 251, 845, 1350
TspGWI	ACGGA	1 cut(s)	1179
TspRI	CASTG	3 cut(s)	220, 460, 1284
Tth111I	GACNNNGTC	1 cut(s)	935
XmiI	GTMKAC	2 cut(s)	450, 1257
XspI	CTAG	3 cut(s)	749, 1095, 1579
ZrmI	AGTACT	1 cut(s)	324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.