pycom10g06280
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
7170032 .. 7171051
1020 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g06280.1

Sequence Viewer

Length: 1020 bp
ATGCTCGGCGTCGGTGCAATTCCCTCGGTTATTCTTGCCATCGGTGTCTTAGCAATGCCTGAGTCGCCTCGGTGGCTCGTTATGCAGGGTCGACTAGGCGACGCCAGGCAAGTCCTGGACAAAACCTCAGACTCCAAAGAAGAGTCCATGCTCAGACTAGCTGACATCAAAGAAGCTGCTGGAATTCCTGAGGATTGCAACGATGATATCGTCCAGGTCACTGGTCACAGCCACGGTGAAGGCGTTTGGAAGGAATTGTTAGTTCATCCGACACCAACAGTTCTTCATATTCTAATTGCAGCCCTTGGTTTCCACTTCTTTCAGCAAGCCTCTGGTATAGACGCCCTTGTTTTGTACAGTCCAAGGGTCTTTGAGAAGGCTGGGATCACCAGCTCAGACCAATTGCTACTCTGCACTGTCGGAGTTGGACTTTCCAAAACCGTTTTCACCTTAGTCGCTACCTTTTTCCTTGATCGGGTTGGACGGCGTCCACTACTGTTAACGAGTATGGCTGGTATGGTAGTCTCCCTGGTGTGTCTCGGTACAAGCCTTACCATCGTTGATCAACACGAAGGGGCTAGAATGACATGGGCAGTTGTTTTGTGCTTGTTCTGCGTATTAGCCTTCGTTGGGTTTTTCTCAACTGGGATTGGGCCCATCGCCTGGGTCTACAGCTCTGAGATCTTCCCATTGAGGCTGCGGGCTCAAGGGTGTGGTATGGGAGTGGCCGTGAATAGGGTGATGAGTGGCATCCTCTCAATGACTTTCATTTCGTTGTATAAGGCCATCACAATGGGTGGTGCCTTCTTCCTTTATGCGGCAATTGGTGCTGTTGGTTGGATCTTCTTTTTTACAATGCTCCCGGAAACACAAGGCAGAACCCTTGAAGACATGGAGGTCTTGTTTGGTAAATTCCACAAGTGGAGAAAGGCCAACAAACTGCTCGAAAAGAAAAGGCAAGTTGCTCGTGGTGATGGTGGCACCAGTGATCCGGACAACAGGGTGAACCTCTTAGCTTAG

Protein Analysis

340

Amino Acids

36.84

Weight (kDa)

7.66

Isoelectric Point (pI)

30.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 1 - 302 2.3e-64 Sugar (and other) transporter
MFS_1 PF07690 122 - 295 2.9e-08 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 896
AccB1I GGYRCC 2 cut(s) 800, 980
AccB7I CCANNNNNTGG 1 cut(s) 663
AccI GTMKAC 2 cut(s) 91, 669
AccIII TCCGGA 1 cut(s) 991
AciI CCGC 2 cut(s) 700, 818
AclWI GGATC 3 cut(s) 392, 848, 983
AcoI YGGCCR 1 cut(s) 726
AcsI RAATTY 2 cut(s) 183, 911
AcyI GRCGYC 4 cut(s) 9, 102, 342, 487
AfaI GTAC 2 cut(s) 356, 544
AfiI CCNNNNNNNGG 5 cut(s) 475, 630, 663, 735, 817
AgsI TTSAA 1 cut(s) 887
AjnI CCWGG 5 cut(s) 104, 114, 213, 528, 662
AjuI GAANNNNNNNTTGG 2 cut(s) 428, 460
AluBI AGCT 5 cut(s) 161, 176, 393, 675, 1016
AluI AGCT 5 cut(s) 161, 176, 393, 675, 1016
Alw26I GTCTC 2 cut(s) 529, 542
AlwI GGATC 3 cut(s) 392, 848, 983
Aor13HI TCCGGA 1 cut(s) 991
AoxI GGCC 4 cut(s) 653, 726, 783, 930
ApaI GGGCCC 1 cut(s) 657
ApeKI GCWGC 3 cut(s) 176, 299, 697
ApoI RAATTY 2 cut(s) 183, 911
ArsI GACNNNNNNTTYG 2 cut(s) 754, 786
AspS9I GGNCC 2 cut(s) 653, 654
AsuC2I CCSGG 1 cut(s) 863
AsuHPI GGTGA 6 cut(s) 248, 379, 439, 751, 983, 1015
AxyI CCTNAGG 1 cut(s) 189
BaeGI GKGCMC 1 cut(s) 657
BanI GGYRCC 2 cut(s) 800, 980
BanII GRGCYC 2 cut(s) 657, 706
BauI CACGAG 1 cut(s) 966
BbsI GAAGAC 1 cut(s) 894
BbvI GCAGC 3 cut(s) 163, 311, 684
BccI CCATC 5 cut(s) 47, 563, 665, 794, 968
BceAI ACGGC 2 cut(s) 500, 713
BcgI CGANNNNNNTGC 4 cut(s) 6, 40, 947, 981
BciT130I CCWGG 5 cut(s) 106, 116, 215, 530, 664
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 1 cut(s) 863
BcoDI GTCTC 2 cut(s) 529, 542
BfaI CTAG 3 cut(s) 95, 158, 579
BfmI CTRYAG 1 cut(s) 670
BglI GCCNNNNNGGC 1 cut(s) 73
BglII AGATCT 1 cut(s) 681
BisI GCNGC 4 cut(s) 177, 300, 698, 819
BlsI GCNGC 4 cut(s) 178, 301, 699, 820
Bme1390I CCNGG 6 cut(s) 106, 116, 215, 530, 664, 863
BmgT120I GGNCC 2 cut(s) 653, 654
BmiI GGNNCC 3 cut(s) 655, 802, 982
BmrFI CCNGG 6 cut(s) 106, 116, 215, 530, 664, 863
BmrI ACTGGG 1 cut(s) 654
BmsI GCATC 1 cut(s) 759
BmuI ACTGGG 1 cut(s) 654
BpiI GAAGAC 1 cut(s) 894
BpuEI CTTGAG 1 cut(s) 690
BpuMI CCSGG 1 cut(s) 863
BsaHI GRCGYC 4 cut(s) 9, 102, 342, 487
BsaJI CCNNGG 7 cut(s) 24, 68, 232, 304, 362, 528, 663
BsaWI WCCGGW 1 cut(s) 991
BsaXI ACNNNNNCTCC 4 cut(s) 714, 744, 887, 917
Bsc4I CCNNNNNNNGG 5 cut(s) 475, 630, 663, 735, 817
Bse1I ACTGG 3 cut(s) 226, 649, 984
Bse21I CCTNAGG 1 cut(s) 189
Bse3DI GCAATG 1 cut(s) 60
BseAI TCCGGA 1 cut(s) 991
BseBI CCWGG 5 cut(s) 106, 116, 215, 530, 664
BseDI CCNNGG 7 cut(s) 24, 68, 232, 304, 362, 528, 663
BseGI GGATG 2 cut(s) 265, 750
BseLI CCNNNNNNNGG 5 cut(s) 475, 630, 663, 735, 817
BseMI GCAATG 1 cut(s) 60
BseMII CTCAG 6 cut(s) 51, 141, 166, 180, 408, 669
BseNI ACTGG 3 cut(s) 226, 649, 984
BseSI GKGCMC 1 cut(s) 657
BseXI GCAGC 3 cut(s) 163, 311, 684
BseYI CCCAGC 1 cut(s) 380
BsgI GTGCAG 1 cut(s) 397
BshFI GGCC 4 cut(s) 655, 728, 785, 932
BshNI GGYRCC 2 cut(s) 800, 980
BsiSI CCGG 2 cut(s) 863, 992
BslI CCNNNNNNNGG 5 cut(s) 475, 630, 663, 735, 817
BsmAI GTCTC 2 cut(s) 529, 542
BsnI GGCC 4 cut(s) 655, 728, 785, 932
Bsp120I GGGCCC 1 cut(s) 653
Bsp1286I GDGCHC 2 cut(s) 657, 706
Bsp13I TCCGGA 1 cut(s) 991
Bsp1407I TGTACA 1 cut(s) 354
Bsp143I GATC 6 cut(s) 384, 472, 562, 681, 840, 988
BspACI CCGC 2 cut(s) 700, 818
BspANI GGCC 4 cut(s) 655, 728, 785, 932
BspCNI CTCAG 6 cut(s) 52, 140, 165, 181, 407, 670
BspEI TCCGGA 1 cut(s) 991
BspLI GGNNCC 3 cut(s) 655, 802, 982
BspPI GGATC 3 cut(s) 392, 848, 983
BspT107I GGYRCC 2 cut(s) 800, 980
BsrDI GCAATG 1 cut(s) 60
BsrGI TGTACA 1 cut(s) 354
BsrI ACTGG 3 cut(s) 226, 649, 984
BssECI CCNNGG 7 cut(s) 24, 68, 232, 304, 362, 528, 663
BssMI GATC 6 cut(s) 384, 472, 562, 681, 840, 988
BssNI GRCGYC 4 cut(s) 9, 102, 342, 487
BssSI CACGAG 1 cut(s) 966
BssT1I CCWWGG 2 cut(s) 304, 362
Bst2BI CACGAG 1 cut(s) 966
Bst2UI CCWGG 5 cut(s) 106, 116, 215, 530, 664
Bst4CI ACNGT 6 cut(s) 236, 280, 359, 418, 442, 498
Bst6I CTCTTC 1 cut(s) 135
BstACI GRCGYC 4 cut(s) 9, 102, 342, 487
BstAPI GCANNNNNTGC 1 cut(s) 827
BstAUI TGTACA 1 cut(s) 354
BstC8I GCNNGC 2 cut(s) 327, 702
BstDSI CCRYGG 1 cut(s) 232
BstF5I GGATG 2 cut(s) 265, 750
BstKTI GATC 6 cut(s) 387, 475, 565, 684, 843, 991
BstMAI GTCTC 2 cut(s) 529, 542
BstMBI GATC 6 cut(s) 384, 472, 562, 681, 840, 988
BstMWI GCNNNNNNNGC 5 cut(s) 64, 73, 82, 612, 827
BstNI CCWGG 5 cut(s) 106, 116, 215, 530, 664
BstSCI CCNGG 6 cut(s) 104, 114, 213, 528, 662, 861
BstSFI CTRYAG 1 cut(s) 670
BstSLI GKGCMC 1 cut(s) 657
BstV1I GCAGC 3 cut(s) 163, 311, 684
BstV2I GAAGAC 1 cut(s) 894
BstX2I RGATCY 2 cut(s) 681, 840
BstXI CCANNNNNNTGG 2 cut(s) 221, 793
BstYI RGATCY 2 cut(s) 681, 840
Bsu36I CCTNAGG 1 cut(s) 189
BsuRI GGCC 4 cut(s) 655, 728, 785, 932
BtgI CCRYGG 1 cut(s) 232
BtgZI GCGATG 1 cut(s) 643
BtsCI GGATG 2 cut(s) 265, 750
BtsIMutI CAGTG 3 cut(s) 219, 414, 991
Cac8I GCNNGC 2 cut(s) 327, 702
Cfr13I GGNCC 2 cut(s) 653, 654
CseI GACGC 3 cut(s) 110, 350, 476
Csp6I GTAC 2 cut(s) 355, 543
CviAII CATG 3 cut(s) 148, 588, 892
CviQI GTAC 2 cut(s) 355, 543
DpnI GATC 6 cut(s) 386, 474, 564, 683, 842, 990
DpnII GATC 6 cut(s) 384, 472, 562, 681, 840, 988
DrdI GACNNNNNNGTC 1 cut(s) 896
DseDI GACNNNNNNGTC 1 cut(s) 896
EaeI YGGCCR 1 cut(s) 726
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
Eco130I CCWWGG 2 cut(s) 304, 362
Eco24I GRGCYC 2 cut(s) 657, 706
Eco32I GATATC 1 cut(s) 208
Eco81I CCTNAGG 1 cut(s) 189
EcoRI GAATTC 1 cut(s) 183
EcoRII CCWGG 5 cut(s) 104, 114, 213, 528, 662
EcoRV GATATC 1 cut(s) 208
EcoT14I CCWWGG 2 cut(s) 304, 362
EcoT38I GRGCYC 2 cut(s) 657, 706
ErhI CCWWGG 2 cut(s) 304, 362
FaeI CATG 3 cut(s) 151, 591, 895
FatI CATG 3 cut(s) 147, 587, 891
FauI CCCGC 1 cut(s) 693
FbaI TGATCA 1 cut(s) 562
FblI GTMKAC 2 cut(s) 91, 669
Fnu4HI GCNGC 4 cut(s) 177, 300, 698, 819
FokI GGATG 2 cut(s) 252, 737
FriOI GRGCYC 2 cut(s) 657, 706
Fsp4HI GCNGC 4 cut(s) 177, 300, 698, 819
FspBI CTAG 3 cut(s) 95, 158, 579
GluI GCNGC 4 cut(s) 177, 300, 698, 819
GsaI CCCAGC 1 cut(s) 384
HaeIII GGCC 4 cut(s) 655, 728, 785, 932
HapII CCGG 2 cut(s) 863, 992
HgaI GACGC 3 cut(s) 110, 350, 476
Hin1I GRCGYC 4 cut(s) 9, 102, 342, 487
Hin1II CATG 3 cut(s) 151, 591, 895
HincII GTYRAC 2 cut(s) 92, 501
HindII GTYRAC 2 cut(s) 92, 501
HinfI GANTC 3 cut(s) 62, 131, 143
HpaI GTTAAC 1 cut(s) 501
HpaII CCGG 2 cut(s) 863, 992
HphI GGTGA 6 cut(s) 248, 379, 439, 751, 983, 1015
Hpy166II GTNNAC 5 cut(s) 92, 491, 501, 670, 1006
Hpy188I TCNGA 6 cut(s) 130, 155, 270, 397, 422, 679
Hpy188III TCNNGA 2 cut(s) 188, 992
Hpy8I GTNNAC 5 cut(s) 92, 491, 501, 670, 1006
Hpy99I CGWCG 2 cut(s) 14, 104
HpyAV CCTTC 6 cut(s) 233, 244, 370, 566, 634, 814
HpyCH4III ACNGT 6 cut(s) 236, 280, 359, 418, 442, 498
HpyCH4V TGCA 5 cut(s) 17, 85, 198, 299, 414
HpyF10VI GCNNNNNNNGC 5 cut(s) 64, 73, 82, 612, 827
Hsp92I GRCGYC 4 cut(s) 9, 102, 342, 487
Hsp92II CATG 3 cut(s) 151, 591, 895
Kpn2I TCCGGA 1 cut(s) 991
Ksp22I TGATCA 1 cut(s) 562
KspAI GTTAAC 1 cut(s) 501
Kzo9I GATC 6 cut(s) 384, 472, 562, 681, 840, 988
LmnI GCTCC 1 cut(s) 864
Lsp1109I GCAGC 3 cut(s) 163, 311, 684
LweI GCATC 1 cut(s) 759
MaeI CTAG 3 cut(s) 95, 158, 579
MaeIII GTNAC 2 cut(s) 217, 224
MalI GATC 6 cut(s) 386, 474, 564, 683, 842, 990
MboI GATC 6 cut(s) 384, 472, 562, 681, 840, 988
MboII GAAGA 6 cut(s) 152, 275, 676, 799, 835, 899
MfeI CAATTG 2 cut(s) 401, 822
MflI RGATCY 2 cut(s) 681, 840
MhlI GDGCHC 2 cut(s) 657, 706
MluCI AATT 7 cut(s) 18, 183, 254, 294, 401, 822, 911
MlyI GAGTC 3 cut(s) 71, 125, 152
MmeI TCCRAC 5 cut(s) 293, 400, 406, 460, 818
MnlI CCTC 9 cut(s) 34, 78, 136, 184, 340, 687, 764, 889, 1019
MroI TCCGGA 1 cut(s) 991
MseI TTAA 1 cut(s) 500
MslI CAYNNNNRTG 1 cut(s) 791
MspI CCGG 2 cut(s) 863, 992
MspR9I CCNGG 6 cut(s) 106, 116, 215, 530, 664, 863
MunI CAATTG 2 cut(s) 401, 822
MvaI CCWGG 5 cut(s) 106, 116, 215, 530, 664
MwoI GCNNNNNNNGC 5 cut(s) 64, 73, 82, 612, 827
NciI CCSGG 1 cut(s) 863
NdeII GATC 6 cut(s) 384, 472, 562, 681, 840, 988
NlaIII CATG 3 cut(s) 151, 591, 895
NlaIV GGNNCC 3 cut(s) 655, 802, 982
NmuCI GTSAC 2 cut(s) 217, 224
PcsI WCGNNNNNNNCGW 2 cut(s) 207, 240
PflFI GACNNNGTC 1 cut(s) 486
PflMI CCANNNNNTGG 1 cut(s) 663
PfoI TCCNGGA 2 cut(s) 114, 861
PkrI GCNGC 4 cut(s) 178, 301, 699, 820
PleI GAGTC 3 cut(s) 70, 125, 151
PpsI GAGTC 3 cut(s) 70, 125, 151
Psp6I CCWGG 5 cut(s) 104, 114, 213, 528, 662
PspFI CCCAGC 1 cut(s) 380
PspGI CCWGG 5 cut(s) 104, 114, 213, 528, 662
PspN4I GGNNCC 3 cut(s) 655, 802, 982
PspOMI GGGCCC 1 cut(s) 653
PspPI GGNCC 2 cut(s) 653, 654
PsuI RGATCY 2 cut(s) 681, 840
PsyI GACNNNGTC 1 cut(s) 486
RsaI GTAC 2 cut(s) 356, 544
RsaNI GTAC 2 cut(s) 355, 543
RseI CAYNNNNRTG 1 cut(s) 791
SalI GTCGAC 1 cut(s) 90
SaqAI TTAA 1 cut(s) 500
SatI GCNGC 4 cut(s) 177, 300, 698, 819
Sau3AI GATC 6 cut(s) 384, 472, 562, 681, 840, 988
Sau96I GGNCC 2 cut(s) 653, 654
SchI GAGTC 3 cut(s) 71, 125, 152
ScrFI CCNGG 6 cut(s) 106, 116, 215, 530, 664, 863
SduI GDGCHC 2 cut(s) 657, 706
SfaNI GCATC 1 cut(s) 759
SfcI CTRYAG 1 cut(s) 670
SmiMI CAYNNNNRTG 1 cut(s) 791
SmlI CTYRAG 1 cut(s) 705
SmoI CTYRAG 1 cut(s) 705
Sse9I AATT 7 cut(s) 18, 183, 254, 294, 401, 822, 911
SsiI CCGC 2 cut(s) 700, 818
SspMI CTAG 3 cut(s) 95, 158, 579
StyD4I CCNGG 6 cut(s) 104, 114, 213, 528, 662, 861
StyI CCWWGG 2 cut(s) 304, 362
TaaI ACNGT 6 cut(s) 236, 280, 359, 418, 442, 498
TaqI TCGA 2 cut(s) 91, 945
TasI AATT 7 cut(s) 18, 183, 254, 294, 401, 822, 911
TatI WGTACW 1 cut(s) 354
TauI GCSGC 1 cut(s) 821
Tru1I TTAA 1 cut(s) 500
Tru9I TTAA 1 cut(s) 500
TscAI CASTG 3 cut(s) 226, 421, 991
TseFI GTSAC 2 cut(s) 217, 224
TseI GCWGC 3 cut(s) 176, 299, 697
Tsp45I GTSAC 2 cut(s) 217, 224
TspDTI ATGAA 3 cut(s) 254, 275, 757
TspRI CASTG 3 cut(s) 226, 421, 991
Tth111I GACNNNGTC 1 cut(s) 486
Van91I CCANNNNNTGG 1 cut(s) 663
XapI RAATTY 2 cut(s) 183, 911
XcmI CCANNNNNNNNNTGG 1 cut(s) 112
XmiI GTMKAC 2 cut(s) 91, 669
XspI CTAG 3 cut(s) 95, 158, 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.