Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000765

Physical Location & Seq

Genomic Coordinates Forward (+)

19009527 .. 19018734

Gene Structure 9208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G010870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCTGACCGGAGAGCTGAGGAAAATGTCGTCTCCGGCCAACCCACCCAGAAAACCATTGCGGATTTCGATCCCGCACCCAAGCCCAAGAGAAACAAGTACGCTTTAGCTTGTGCTATGTTGGCTTCCATGACTTCGATCCTACTCGGTTATGATATTGGTGTAATGAGTGGAGCGGCGATCTTCATCAAAGACGACCTCCATATCTCCGACGTGCAGGTCGAAGTTCTAGTTGGAATTCTGAATCTCTACTCCCTCATCGGATCCGCCGCCGCCGGCAGGACTTCCGACTGGATTGGACGTCGGTATACCATAGTCCTCGCCGGAGCCATCTTCTTCGCCGGTTCTCTTCTCATGGGCTTCGCCACCAACTACTCGTTCCTCATGTTCGGGAGATTTGTCGCTGGAATCGGCGTCGGTTATGCCCTTATGATTGCTCCTGTCTACACTGTTGGAACTTTTTCTCCGGCGTCGTCTCGTGGTTTCCTCACGTCTTTTGCTGATTTGTTTATCAATGCCGGAATCTTATTGGGGTACATATCCAACTGGGCCTTTTCAAAGCTCACACTTAACCTAGGGTGGCGTCTCATGCTTGGCGTCGGCGCCATCCCTTCCGTCTTCCTTGCCATTGGCGTCCTAGCCATGCCGGAATCCCCTCGCTGGCTGGTCATGCAGGGCCGCTTCGGTGACGCCAAGCAAGTCCTCGACCGAACCTCAGACTCCATGGAAGAGTCCAAACTCCGACTCGCCGACATCAAAGAAGCCGCTGGAATCCCCGAACACTGCAACGACGACGTCGTTCAAGTCCCAAAACACAGCCACGGTGAAGACGTCTGGAAAGAGCTCATCCTCCGCCCCACCCCCGCCGTCCGTCACATTCTCATTGCCGCCGTCGGTATGCACTTCTTCCAACAAGCCTCCGGCATCGACGCCGTCGTTTTATACAGCCCGAGAATCTTCAAAAAGGCCGGAATCACGTCCAAGAACAAACTCCTCATCGCCACCATAGCCGTCGGAACCGTCAAGACAGTCTTCATCCTCGTCCCAACTTTTTTCCTGGACAGGATAGGACGTCGTCCTTTGCTTCTCACCAGCGTAGCAGGGATGATAACCTCACTCGGCTGTCTCGGTTTCGGCCTCACCATCATCGACCACAGCAACGAAAAGGTCATGTGGGCCATTGTGCTCTGCATCACCATGGTCTTATTCTACGTCGCTTTCTTCTCCATCGGAATGGGCCCTATCACGTGGGTCTATAGCTCCGAGATCTTCCCATTAAAGCTACGAGCTCAGGGATGTAGTATTGGAGTCGCTGTCAACAGAGTCGCGAGTGGGATAGTCTCAATGACTTTTATATCCCTGTACAAGGCCATAACTATTGGCGGAGCCTTCTTTCTTTATGCTGGAATTGCGGCTGTTGGCTGGGTGTTCTTATGTACAATGCTACCGGAGACACGGGGGAGAACCCTTGAAGATATGGAAGTCCTTTTTGGGAAGTTCCACAAGTGGAAAGAGGCCAATGTCTTGCTCAAGAATAAGCAGGTGGATCCTAAAAGTAATGGAAACAACACCGCCAATGGTGGTCTGTTCAGAGAGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005365 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015146 GO:0015148 GO:0015149 GO:0015166 GO:0015168 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015575 GO:0015576 GO:0015591 GO:0015672 GO:0015749 GO:0015750 GO:0015752 GO:0015753 GO:0015757 GO:0015791 GO:0015793 GO:0015795 GO:0015797 GO:0015798 GO:0015850 GO:0016020 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0042995 GO:0044464 GO:0046323 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090406 GO:0090696 GO:0090697 GO:0090698 GO:0098655 GO:0098660 GO:0098662 GO:0099402 GO:0120025 GO:1901618 GO:1902600 GO:1904659 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

533

Amino Acids

57.93

Weight (kDa)

9.21

Isoelectric Point (pI)

33.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	39 - 497	2e-105	Sugar (and other) transporter
MFS_1	PF07690	45 - 446	5.3e-30	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16120 AT2G16130 AT3G18830
fragaria_vesca	FvH4_2g08400 FvH4_2g08400 FvH4_2g08430 FvH4_2g08430 FvH4_2g08430
malus_domestica	MD05G1068600.v1.1 MD05G1068700.v1.1 MD05G1069100.v1.1 MD05G1069700.v1.1 MD10G1078900.v1.1 MD10G1079100.v1.1 MD10G1079200.v1.1 MD10G1079500.v1.1 MD10G1079600.v1.1 MD10G1079700.v1.1 MD10G1079800.v1.1 MD10G1079900.v1.1 MD10G1080000.v1.1 MD10G1080100.v1.1 MD10G1106100.v1.1 MD12G1026200.v1.1 MD17G1247200.v1.1
prunus_persica	Prupe.3G071100_v2.0.a1 Prupe.8G100700_v2.0.a1 Prupe.8G101000_v2.0.a1 Prupe.8G101200_v2.0.a1 Prupe.8G101500_v2.0.a1 Prupe.8G105300_v2.0.a1 Prupe.8G105400_v2.0.a1 Prupe.8G105500_v2.0.a1 Prupe.8G105600_v2.0.a1
pyrus_communis	pycom04g19030 pycom04g19050 pycom04g19090 pycom04g19120 pycom05g05990 pycom05g06030 pycom10g06180 pycom10g06270 pycom10g06280 pycom10g06300 pycom10g06330 pycom10g06340 pycom12g02550 pycom17g26280
rosa_chinensis	RchiOBHm_Chr6g0263471 RchiOBHm_Chr6g0263621 RchiOBHm_Chr6g0263691
rosa_laevigata	RLG00000014328 RLG00000014330
rosa_multiflora	Rmu_co8086996.1_g000001 Rmu_co8446581.1_g000001 Rmu_sc0000565.1_g000052 Rmu_sc0010495.1_g000011
rosa_roxburghii	Rroxscaffold_176G00431110 Rroxscaffold_7G00204150
rosa_rugosa	Rorug06G0005300 Rorug06G0005700
rosa_samantha	Rh6AG124800 Rh6BG120900 Rh6CG119100 Rh6DG107300 Rh6DG107500
rosa_wichuraiana	Rw0G005290 Rw0G005320 Rw6G010850 Rw6G010870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1531
AasI	GACNNNNNNGTC	1 cut(s)	218
AatII	GACGTC	4 cut(s)	304, 798, 834, 1075
Acc36I	ACCTGC	2 cut(s)	208, 1531
AccB1I	GGYRCC	1 cut(s)	602
AccBSI	CCGCTC	1 cut(s)	176
AccI	GTMKAC	2 cut(s)	308, 444
AccII	CGCG	1 cut(s)	1328
AclWI	GGATC	6 cut(s)	65, 133, 258, 271, 1541, 1554
AcoI	YGGCCR	1 cut(s)	37
AcsI	RAATTY	1 cut(s)	237
AcvI	CACGTG	1 cut(s)	1248
AfaI	GTAC	4 cut(s)	101, 536, 1364, 1438
AfiI	CCNNNNNNNGG	3 cut(s)	279, 660, 1366
AgsI	TTSAA	4 cut(s)	558, 803, 961, 1472
AjiI	CACGTC	3 cut(s)	214, 492, 978
AjnI	CCWGG	1 cut(s)	1056
AjuI	GAANNNNNNNTTGG	6 cut(s)	216, 248, 362, 394, 1473, 1505
AloI	GAACNNNNNNTCC	2 cut(s)	448, 480
AluBI	AGCT	7 cut(s)	17, 110, 562, 844, 1260, 1282, 1289
AluI	AGCT	7 cut(s)	17, 110, 562, 844, 1260, 1282, 1289
Alw21I	GWGCWC	3 cut(s)	846, 1188, 1291
Alw26I	GTCTC	6 cut(s)	37, 480, 590, 1130, 1345, 1445
AlwI	GGATC	6 cut(s)	65, 133, 258, 271, 1541, 1554
Ama87I	CYCGRG	1 cut(s)	949
AoxI	GGCC	9 cut(s)	37, 549, 676, 966, 1135, 1176, 1237, 1368, 1515
ApaI	GGGCCC	1 cut(s)	1241
ApoI	RAATTY	1 cut(s)	237
Asp700I	GAANNNNTTC	1 cut(s)	460
AspA2I	CCTAGG	1 cut(s)	574
AspLEI	GCGC	1 cut(s)	605
AspS9I	GGNCC	5 cut(s)	549, 676, 1176, 1237, 1238
AsuHPI	GGTGA	5 cut(s)	698, 836, 1081, 1132, 1186
AvaI	CYCGRG	1 cut(s)	949
AvrII	CCTAGG	1 cut(s)	574
BaeGI	GKGCMC	1 cut(s)	1241
BamHI	GGATCC	2 cut(s)	263, 1546
BanI	GGYRCC	1 cut(s)	602
BanII	GRGCYC	3 cut(s)	846, 1241, 1291
BauI	CACGAG	1 cut(s)	477
BbrPI	CACGTG	1 cut(s)	1248
BbsI	GAAGAC	3 cut(s)	610, 834, 1024
Bbv12I	GWGCWC	3 cut(s)	846, 1188, 1291
BbvCI	CCTCAGC	1 cut(s)	18
BccI	CCATC	4 cut(s)	338, 614, 1151, 1235
BceAI	ACGGC	4 cut(s)	851, 875, 917, 995
BciT130I	CCWGG	1 cut(s)	1058
BcoDI	GTCTC	6 cut(s)	37, 480, 590, 1130, 1345, 1445
BfaI	CTAG	3 cut(s)	230, 575, 638
BfmI	CTRYAG	1 cut(s)	1255
BfoI	RGCGCY	1 cut(s)	606
BfuAI	ACCTGC	2 cut(s)	208, 1531
BglII	AGATCT	1 cut(s)	1266
BisI	GCNGC	7 cut(s)	177, 270, 273, 679, 765, 888, 1413
BlnI	CCTAGG	1 cut(s)	574
BlsI	GCNGC	7 cut(s)	178, 271, 274, 680, 766, 889, 1414
Bme1390I	CCNGG	1 cut(s)	1058
BmeT110I	CYCGRG	1 cut(s)	949
BmgBI	CACGTC	3 cut(s)	214, 492, 978
BmgT120I	GGNCC	5 cut(s)	549, 676, 1176, 1237, 1238
BmiI	GGNNCC	7 cut(s)	265, 328, 604, 1018, 1239, 1387, 1548
BmrFI	CCNGG	1 cut(s)	1058
BmrI	ACTGGG	1 cut(s)	556
BmsI	GCATC	2 cut(s)	933, 1200
BmuI	ACTGGG	1 cut(s)	556
BpiI	GAAGAC	3 cut(s)	610, 834, 1024
Bpu10I	CCTNAGC	2 cut(s)	18, 1290
BpuEI	CTTGAG	1 cut(s)	1514
BsaAI	YACGTR	1 cut(s)	1248
BsaBI	GATNNNNATC	2 cut(s)	69, 185
BsaJI	CCNNGG	4 cut(s)	574, 723, 820, 1197
BsaWI	WCCGGW	2 cut(s)	9, 1447
BsaXI	ACNNNNNCTCC	4 cut(s)	448, 478, 1299, 1329
Bsc4I	CCNNNNNNNGG	3 cut(s)	279, 660, 1366
Bse118I	RCCGGY	2 cut(s)	275, 341
Bse1I	ACTGG	2 cut(s)	296, 551
Bse3DI	GCAATG	2 cut(s)	57, 882
Bse8I	GATNNNNATC	2 cut(s)	69, 185
BseBI	CCWGG	1 cut(s)	1058
BseDI	CCNNGG	4 cut(s)	574, 723, 820, 1197
BseGI	GGATG	5 cut(s)	606, 846, 1035, 1110, 1301
BseJI	GATNNNNATC	2 cut(s)	69, 185
BseLI	CCNNNNNNNGG	3 cut(s)	279, 660, 1366
BseMI	GCAATG	2 cut(s)	57, 882
BseMII	CTCAG	3 cut(s)	9, 729, 1304
BseNI	ACTGG	2 cut(s)	296, 551
BseRI	GAGGAG	1 cut(s)	983
BseSI	GKGCMC	1 cut(s)	1241
BseYI	CCCAGC	1 cut(s)	1422
BsgI	GTGCAG	1 cut(s)	236
Bsh1236I	CGCG	1 cut(s)	1328
Bsh1285I	CGRYCG	1 cut(s)	709
BshFI	GGCC	9 cut(s)	39, 551, 678, 968, 1137, 1178, 1239, 1370, 1517
BshNI	GGYRCC	1 cut(s)	602
BsiEI	CGRYCG	1 cut(s)	709
BsiHKAI	GWGCWC	3 cut(s)	846, 1188, 1291
BsiHKCI	CYCGRG	1 cut(s)	949
BslFI	GGGAC	2 cut(s)	791, 1028
BslI	CCNNNNNNNGG	3 cut(s)	279, 660, 1366
BsmAI	GTCTC	6 cut(s)	37, 480, 590, 1130, 1345, 1445
BsmBI	CGTCTC	3 cut(s)	37, 480, 590
BsmFI	GGGAC	2 cut(s)	791, 1028
BsnI	GGCC	9 cut(s)	39, 551, 678, 968, 1137, 1178, 1239, 1370, 1517
BsoBI	CYCGRG	1 cut(s)	949
Bsp120I	GGGCCC	1 cut(s)	1237
Bsp1286I	GDGCHC	4 cut(s)	846, 1188, 1241, 1291
Bsp1407I	TGTACA	2 cut(s)	1362, 1436
Bsp143I	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
Bsp19I	CCATGG	2 cut(s)	723, 1197
Bsp68I	TCGCGA	1 cut(s)	1328
BspANI	GGCC	9 cut(s)	39, 551, 678, 968, 1137, 1178, 1239, 1370, 1517
BspCNI	CTCAG	3 cut(s)	10, 728, 1303
BspFNI	CGCG	1 cut(s)	1328
BspLI	GGNNCC	7 cut(s)	265, 328, 604, 1018, 1239, 1387, 1548
BspMI	ACCTGC	2 cut(s)	208, 1531
BspPI	GGATC	6 cut(s)	65, 133, 258, 271, 1541, 1554
BspT107I	GGYRCC	1 cut(s)	602
BsrBI	CCGCTC	1 cut(s)	176
BsrDI	GCAATG	2 cut(s)	57, 882
BsrFI	RCCGGY	2 cut(s)	275, 341
BsrGI	TGTACA	2 cut(s)	1362, 1436
BsrI	ACTGG	2 cut(s)	296, 551
BssAI	RCCGGY	2 cut(s)	275, 341
BssECI	CCNNGG	4 cut(s)	574, 723, 820, 1197
BssMI	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
BssNAI	GTATAC	1 cut(s)	309
BssSI	CACGAG	1 cut(s)	477
BssT1I	CCWWGG	3 cut(s)	574, 723, 1197
Bst1107I	GTATAC	1 cut(s)	309
Bst2BI	CACGAG	1 cut(s)	477
Bst2UI	CCWGG	1 cut(s)	1058
Bst4CI	ACNGT	4 cut(s)	451, 824, 1021, 1030
Bst6I	CTCTTC	2 cut(s)	354, 723
BstAUI	TGTACA	2 cut(s)	1362, 1436
BstBAI	YACGTR	1 cut(s)	1248
BstC8I	GCNNGC	2 cut(s)	277, 662
BstDEI	CTNAG	3 cut(s)	18, 715, 1290
BstDSI	CCRYGG	3 cut(s)	723, 820, 1197
BstENI	CCTNNNNNAGG	1 cut(s)	1364
BstF5I	GGATG	5 cut(s)	606, 846, 1035, 1110, 1301
BstFNI	CGCG	1 cut(s)	1328
BstH2I	RGCGCY	1 cut(s)	606
BstHHI	GCGC	1 cut(s)	605
BstKTI	GATC	6 cut(s)	73, 141, 183, 266, 1269, 1549
BstMAI	GTCTC	6 cut(s)	37, 480, 590, 1130, 1345, 1445
BstMBI	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
BstMCI	CGRYCG	1 cut(s)	709
BstMWI	GCNNNNNNNGC	5 cut(s)	122, 589, 670, 1007, 1409
BstNI	CCWGG	1 cut(s)	1058
BstSCI	CCNGG	1 cut(s)	1056
BstSFI	CTRYAG	1 cut(s)	1255
BstSLI	GKGCMC	1 cut(s)	1241
BstUI	CGCG	1 cut(s)	1328
BstV2I	GAAGAC	3 cut(s)	610, 834, 1024
BstX2I	RGATCY	3 cut(s)	263, 1266, 1546
BstXI	CCANNNNNNTGG	1 cut(s)	1234
BstYI	RGATCY	3 cut(s)	263, 1266, 1546
BstZ17I	GTATAC	1 cut(s)	309
BsuRI	GGCC	9 cut(s)	39, 551, 678, 968, 1137, 1178, 1239, 1370, 1517
BtgI	CCRYGG	3 cut(s)	723, 820, 1197
BtgZI	GCGATG	1 cut(s)	982
BtrI	CACGTC	3 cut(s)	214, 492, 978
BtsCI	GGATG	5 cut(s)	606, 846, 1035, 1110, 1301
BtsI	GCAGTG	1 cut(s)	781
BtsIMutI	CAGTG	2 cut(s)	447, 781
BtuMI	TCGCGA	1 cut(s)	1328
BveI	ACCTGC	2 cut(s)	208, 1531
Cac8I	GCNNGC	2 cut(s)	277, 662
CfoI	GCGC	1 cut(s)	605
Cfr10I	RCCGGY	2 cut(s)	275, 341
Cfr13I	GGNCC	5 cut(s)	549, 676, 1176, 1237, 1238
CseI	GACGC	7 cut(s)	403, 459, 572, 586, 622, 698, 938
Csp6I	GTAC	4 cut(s)	100, 535, 1363, 1437
CviAII	CATG	9 cut(s)	130, 355, 385, 589, 643, 670, 724, 1171, 1198
CviQI	GTAC	4 cut(s)	100, 535, 1363, 1437
DdeI	CTNAG	3 cut(s)	18, 715, 1290
DinI	GGCGCC	1 cut(s)	604
DpnI	GATC	6 cut(s)	72, 140, 182, 265, 1268, 1548
DpnII	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
DrdI	GACNNNNNNGTC	1 cut(s)	218
DseDI	GACNNNNNNGTC	1 cut(s)	218
EaeI	YGGCCR	1 cut(s)	37
Eam1104I	CTCTTC	2 cut(s)	354, 723
EarI	CTCTTC	2 cut(s)	354, 723
EciI	GGCGGA	3 cut(s)	256, 842, 1398
Ecl136II	GAGCTC	2 cut(s)	844, 1289
Eco130I	CCWWGG	3 cut(s)	574, 723, 1197
Eco24I	GRGCYC	3 cut(s)	846, 1241, 1291
Eco53kI	GAGCTC	2 cut(s)	844, 1289
Eco72I	CACGTG	1 cut(s)	1248
Eco88I	CYCGRG	1 cut(s)	949
EcoICRI	GAGCTC	2 cut(s)	844, 1289
EcoNI	CCTNNNNNAGG	1 cut(s)	1364
EcoO109I	RGGNCCY	1 cut(s)	1238
EcoRI	GAATTC	1 cut(s)	237
EcoRII	CCWGG	1 cut(s)	1056
EcoT14I	CCWWGG	3 cut(s)	574, 723, 1197
EcoT38I	GRGCYC	3 cut(s)	846, 1241, 1291
EgeI	GGCGCC	1 cut(s)	604
EheI	GGCGCC	1 cut(s)	604
ErhI	CCWWGG	3 cut(s)	574, 723, 1197
Esp3I	CGTCTC	3 cut(s)	37, 480, 590
FaeI	CATG	9 cut(s)	133, 358, 388, 592, 646, 673, 727, 1174, 1201
FalI	AAGNNNNNCTT	2 cut(s)	1016, 1048
FaqI	GGGAC	2 cut(s)	791, 1028
FatI	CATG	9 cut(s)	129, 354, 384, 588, 642, 669, 723, 1170, 1197
FauI	CCCGC	2 cut(s)	82, 871
FblI	GTMKAC	2 cut(s)	308, 444
Fnu4HI	GCNGC	7 cut(s)	177, 270, 273, 679, 765, 888, 1413
FokI	GGATG	5 cut(s)	593, 833, 1022, 1117, 1308
FriOI	GRGCYC	3 cut(s)	846, 1241, 1291
Fsp4HI	GCNGC	7 cut(s)	177, 270, 273, 679, 765, 888, 1413
FspBI	CTAG	3 cut(s)	230, 575, 638
GlaI	GCGC	1 cut(s)	604
GluI	GCNGC	7 cut(s)	177, 270, 273, 679, 765, 888, 1413
GsaI	CCCAGC	1 cut(s)	1426
HaeII	RGCGCY	1 cut(s)	606
HaeIII	GGCC	9 cut(s)	39, 551, 678, 968, 1137, 1178, 1239, 1370, 1517
HgaI	GACGC	7 cut(s)	403, 459, 572, 586, 622, 698, 938
HhaI	GCGC	1 cut(s)	605
Hin1II	CATG	9 cut(s)	133, 358, 388, 592, 646, 673, 727, 1174, 1201
Hin6I	GCGC	1 cut(s)	603
HinP1I	GCGC	1 cut(s)	603
HincII	GTYRAC	1 cut(s)	1318
HindII	GTYRAC	1 cut(s)	1318
HphI	GGTGA	5 cut(s)	698, 836, 1081, 1132, 1186
Hpy166II	GTNNAC	3 cut(s)	309, 445, 1318
Hpy188III	TCNNGA	5 cut(s)	391, 835, 1024, 1327, 1531
Hpy8I	GTNNAC	3 cut(s)	309, 445, 1318
HpyAV	CCTTC	2 cut(s)	621, 1399
HpyCH4III	ACNGT	4 cut(s)	451, 824, 1021, 1030
HpyCH4IV	ACGT	9 cut(s)	213, 301, 491, 795, 831, 977, 1072, 1212, 1247
HpyCH4V	TGCA	5 cut(s)	217, 673, 786, 901, 1191
HpyF10VI	GCNNNNNNNGC	5 cut(s)	122, 589, 670, 1007, 1409
HpyF3I	CTNAG	3 cut(s)	18, 715, 1290
HpySE526I	ACGT	9 cut(s)	213, 301, 491, 795, 831, 977, 1072, 1212, 1247
Hsp92II	CATG	9 cut(s)	133, 358, 388, 592, 646, 673, 727, 1174, 1201
HspAI	GCGC	1 cut(s)	603
KasI	GGCGCC	1 cut(s)	602
KroI	GCCGGC	1 cut(s)	275
KroNI	GCCGGC	1 cut(s)	277
Kzo9I	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
LmnI	GCTCC	5 cut(s)	173, 326, 442, 1265, 1385
LweI	GCATC	2 cut(s)	933, 1200
MaeI	CTAG	3 cut(s)	230, 575, 638
MaeII	ACGT	9 cut(s)	213, 301, 491, 795, 831, 977, 1072, 1212, 1247
MaeIII	GTNAC	2 cut(s)	686, 872
MalI	GATC	6 cut(s)	72, 140, 182, 265, 1268, 1548
MbiI	CCGCTC	1 cut(s)	176
MboI	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
MflI	RGATCY	3 cut(s)	263, 1266, 1546
MhlI	GDGCHC	4 cut(s)	846, 1188, 1241, 1291
MluCI	AATT	2 cut(s)	237, 1407
Mly113I	GGCGCC	1 cut(s)	603
MlyI	GAGTC	5 cut(s)	713, 738, 740, 1317, 1332
MmeI	TCCRAC	8 cut(s)	214, 234, 312, 433, 567, 766, 934, 994
MroNI	GCCGGC	1 cut(s)	275
MroXI	GAANNNNTTC	1 cut(s)	460
MseI	TTAA	2 cut(s)	570, 1277
MslI	CAYNNNNRTG	2 cut(s)	1196, 1232
MspA1I	CMGCKG	1 cut(s)	767
MspR9I	CCNGG	1 cut(s)	1058
MvaI	CCWGG	1 cut(s)	1058
MvnI	CGCG	1 cut(s)	1328
MwoI	GCNNNNNNNGC	5 cut(s)	122, 589, 670, 1007, 1409
NaeI	GCCGGC	1 cut(s)	277
NarI	GGCGCC	1 cut(s)	603
NcoI	CCATGG	2 cut(s)	723, 1197
NdeII	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
NgoMIV	GCCGGC	1 cut(s)	275
NlaIII	CATG	9 cut(s)	133, 358, 388, 592, 646, 673, 727, 1174, 1201
NlaIV	GGNNCC	7 cut(s)	265, 328, 604, 1018, 1239, 1387, 1548
NmeAIII	GCCGAG	1 cut(s)	1098
NmuCI	GTSAC	2 cut(s)	686, 872
NruI	TCGCGA	1 cut(s)	1328
PaqCI	CACCTGC	1 cut(s)	1531
PcsI	WCGNNNNNNNCGW	4 cut(s)	219, 795, 828, 933
PdiI	GCCGGC	1 cut(s)	277
PdmI	GAANNNNTTC	1 cut(s)	460
PfeI	GAWTC	7 cut(s)	244, 408, 522, 650, 771, 954, 972
PflFI	GACNNNGTC	3 cut(s)	794, 932, 1074
PfoI	TCCNGGA	1 cut(s)	1056
PkrI	GCNGC	7 cut(s)	178, 271, 274, 680, 766, 889, 1414
PleI	GAGTC	5 cut(s)	713, 738, 739, 1316, 1331
PluTI	GGCGCC	1 cut(s)	606
PmaCI	CACGTG	1 cut(s)	1248
PmlI	CACGTG	1 cut(s)	1248
PpsI	GAGTC	5 cut(s)	713, 738, 739, 1316, 1331
Ppu21I	YACGTR	1 cut(s)	1248
Psp124BI	GAGCTC	2 cut(s)	846, 1291
Psp6I	CCWGG	1 cut(s)	1056
PspCI	CACGTG	1 cut(s)	1248
PspFI	CCCAGC	1 cut(s)	1422
PspGI	CCWGG	1 cut(s)	1056
PspN4I	GGNNCC	7 cut(s)	265, 328, 604, 1018, 1239, 1387, 1548
PspOMI	GGGCCC	1 cut(s)	1237
PspPI	GGNCC	5 cut(s)	549, 676, 1176, 1237, 1238
PsuI	RGATCY	3 cut(s)	263, 1266, 1546
PsyI	GACNNNGTC	3 cut(s)	794, 932, 1074
RruI	TCGCGA	1 cut(s)	1328
RsaI	GTAC	4 cut(s)	101, 536, 1364, 1438
RsaNI	GTAC	4 cut(s)	100, 535, 1363, 1437
RseI	CAYNNNNRTG	2 cut(s)	1196, 1232
SacI	GAGCTC	2 cut(s)	846, 1291
SaqAI	TTAA	2 cut(s)	570, 1277
SatI	GCNGC	7 cut(s)	177, 270, 273, 679, 765, 888, 1413
Sau3AI	GATC	6 cut(s)	70, 138, 180, 263, 1266, 1546
Sau96I	GGNCC	5 cut(s)	549, 676, 1176, 1237, 1238
SchI	GAGTC	5 cut(s)	713, 738, 740, 1317, 1332
ScrFI	CCNGG	1 cut(s)	1058
SduI	GDGCHC	4 cut(s)	846, 1188, 1241, 1291
SfaNI	GCATC	2 cut(s)	933, 1200
SfcI	CTRYAG	1 cut(s)	1255
SfoI	GGCGCC	1 cut(s)	604
SmiMI	CAYNNNNRTG	2 cut(s)	1196, 1232
SmlI	CTYRAG	1 cut(s)	1529
SmoI	CTYRAG	1 cut(s)	1529
Sse9I	AATT	2 cut(s)	237, 1407
SspDI	GGCGCC	1 cut(s)	602
SspMI	CTAG	3 cut(s)	230, 575, 638
SstI	GAGCTC	2 cut(s)	846, 1291
StyD4I	CCNGG	1 cut(s)	1056
StyI	CCWWGG	3 cut(s)	574, 723, 1197
TaaI	ACNGT	4 cut(s)	451, 824, 1021, 1030
TaiI	ACGT	9 cut(s)	216, 304, 494, 798, 834, 980, 1075, 1215, 1250
TaqI	TCGA	6 cut(s)	69, 137, 222, 705, 927, 1149
TaqII	GACCGA	1 cut(s)	723
TasI	AATT	2 cut(s)	237, 1407
TatI	WGTACW	2 cut(s)	1362, 1436
TauI	GCSGC	7 cut(s)	179, 272, 275, 681, 767, 890, 1415
TfiI	GAWTC	7 cut(s)	244, 408, 522, 650, 771, 954, 972
Tru1I	TTAA	2 cut(s)	570, 1277
Tru9I	TTAA	2 cut(s)	570, 1277
TscAI	CASTG	2 cut(s)	454, 788
TseFI	GTSAC	2 cut(s)	686, 872
Tsp45I	GTSAC	2 cut(s)	686, 872
TspDTI	ATGAA	2 cut(s)	175, 1024
TspGWI	ACGGA	2 cut(s)	604, 860
TspRI	CASTG	2 cut(s)	454, 788
Tth111I	GACNNNGTC	3 cut(s)	794, 932, 1074
XagI	CCTNNNNNAGG	1 cut(s)	1364
XapI	RAATTY	1 cut(s)	237
XmaJI	CCTAGG	1 cut(s)	574
XmiI	GTMKAC	2 cut(s)	308, 444
XmnI	GAANNNNTTC	1 cut(s)	460
XspI	CTAG	3 cut(s)	230, 575, 638
ZraI	GACGTC	4 cut(s)	302, 796, 832, 1073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.