Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0000765

Physical Location & Seq

Genomic Coordinates Reverse (-)

17424317 .. 17426953

Gene Structure 2637 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1106100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGAGATGGCTGACCAGAGGGCAGAAAATAACGTTGTCTCCGGCCAACCCCATAATAGTATTGCAGACTTTGATCCCCCAAAGAAACCCAAGACAAAGAAGTTCGCTGTTGCCTGTGCCGTTTTGGCTTCAATGACGTCTATCTTACTGGGTTATGATATTGGTGTAATGAGTGGAGCGTCTCTCTTCATCAAAGAAAACCTCAATATCAGCGACGTTCAAGTCGAAGTTCTTAATGGTACCTTGAACATATACTCTCTCATTGGCTCCGCCTTGGCCGGTAAAACCTCTGACTACACCATAGTACTTGCCGGAACAATCTTCTTTATTGGAGCTCTCCTCATGGGTTTTGCCCCGAACTACGCCTTCCTCATGTTCGGTAGATTCATTGCCGGAGTTGGAGTTGGCTATGCTCTTATGATAGCTCCTGTCTACACGGCCGAGATCTCTCCGGCCTCGTTTCGTGGCTTCCTCACATCTTTCCCCGAGGTGTTTGTTAACGTTGGTATATTGCTGGGGTACGTATCCAACTTTGCCTTAGCCAAGCTCCCAATCCACTTGAACTGGAGGATCATGCTCGGCATCGGTGCAATTCCCTCAATTTTTCTTGCCCTCGGCGTTTTAGCCATGCCCGAGTCACCACGTTGGCTTGTCATGCAAGGGAGACTCGGAGACGCCAAGCGAGTACTAAATAAAACATCATCTTCTGAAGAGGAATCGCAGCTCAGACTAGACGAGATTAAAAAAGCTGCAGGAATCCCCAAAGACTCAAAGGATGAGGTCGTTCAAGTTTCTAAACGCAGCCAAGGTGAAGGTATATGGAGGGAATTGCTCCTCCGCCCCACGCCGGCCGTTCGCCACATTTTAATAGCAGCCCTTGGTATCCACTTCTTTCAACAAGTGTCGGGCACAGACTCTGTGGTTTTGTATAGCCCCAGGATCTTCGAGAAGGCGGGAATCACTTCTTACAATGATAAGCTACTTGCAACCGTGGCTGTTGGATTTGTCAAGACCATTGCAATCTTGGTGGCAACATTTCAAGTTGATCGGTTTGGACGTCGTATTTTGCTTTTGAGCAGCGTGGGTGGAATGGTAGTTTCTTTTACGCTGCTAGGTATGGGTCTTACGGTCGTTGATCAATCCCACAGCAAGGTCCCGTGGGCCGTCGGGTTGTGCATCGCCATGGTACTATTCATCGTCGCTTTTTTCTCCATCGGGTTGGGACCCATCACGTGGGTTTACAGCTCTGAGATCTTTCCGTTGCAGTTGCGCGCGCAAGGGTGCAGTATGGGGGTGGCCGTAAACAGGGTGACGAGCGGGGTCATCTCGATGACTTTTATTTCATTGTATAAGGCCATCACAATTGGTGGGGCATTTTTTCTTTACGCGGGAATTGCTGCGCTTAGCTGGGTCTTCTTTTATACATTGTATCCAGAGACGCAGGGTCGATCCCTTGAAGATATGGAGGTCTTGTTTGGTAAATACCACAAGTGGAAAGAAGCAAATGCCATGCTTAAAAAGACTAAGCAAGCTGATCATGGTTTTGGTGACGACAACAAGGCTCAAATCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005365 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015146 GO:0015148 GO:0015149 GO:0015166 GO:0015168 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015575 GO:0015576 GO:0015591 GO:0015672 GO:0015749 GO:0015750 GO:0015752 GO:0015753 GO:0015757 GO:0015791 GO:0015793 GO:0015795 GO:0015797 GO:0015798 GO:0015850 GO:0016020 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0042995 GO:0044464 GO:0046323 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090406 GO:0090696 GO:0090697 GO:0090698 GO:0098655 GO:0098660 GO:0098662 GO:0099402 GO:0120025 GO:1901618 GO:1902600 GO:1904659 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

525

Amino Acids

56.96

Weight (kDa)

9.15

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	39 - 492	2.6e-100	Sugar (and other) transporter
MFS_1	PF07690	46 - 330	2e-16	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16120 AT2G16130 AT3G18830
fragaria_vesca	FvH4_2g08400 FvH4_2g08400 FvH4_2g08430 FvH4_2g08430 FvH4_2g08430
malus_domestica	MD05G1068600.v1.1 MD05G1068700.v1.1 MD05G1069100.v1.1 MD05G1069700.v1.1 MD10G1078900.v1.1 MD10G1079100.v1.1 MD10G1079200.v1.1 MD10G1079500.v1.1 MD10G1079600.v1.1 MD10G1079700.v1.1 MD10G1079800.v1.1 MD10G1079900.v1.1 MD10G1080000.v1.1 MD10G1080100.v1.1 MD10G1106100.v1.1 MD12G1026200.v1.1 MD17G1247200.v1.1
prunus_persica	Prupe.3G071100_v2.0.a1 Prupe.8G100700_v2.0.a1 Prupe.8G101000_v2.0.a1 Prupe.8G101200_v2.0.a1 Prupe.8G101500_v2.0.a1 Prupe.8G105300_v2.0.a1 Prupe.8G105400_v2.0.a1 Prupe.8G105500_v2.0.a1 Prupe.8G105600_v2.0.a1
pyrus_communis	pycom04g19030 pycom04g19050 pycom04g19090 pycom04g19120 pycom05g05990 pycom05g06030 pycom10g06180 pycom10g06270 pycom10g06280 pycom10g06300 pycom10g06330 pycom10g06340 pycom12g02550 pycom17g26280
rosa_chinensis	RchiOBHm_Chr6g0263471 RchiOBHm_Chr6g0263621 RchiOBHm_Chr6g0263691
rosa_laevigata	RLG00000014328 RLG00000014330
rosa_multiflora	Rmu_co8086996.1_g000001 Rmu_co8446581.1_g000001 Rmu_sc0000565.1_g000052 Rmu_sc0010495.1_g000011
rosa_roxburghii	Rroxscaffold_176G00431110 Rroxscaffold_7G00204150
rosa_rugosa	Rorug06G0005300 Rorug06G0005700
rosa_samantha	Rh6AG124800 Rh6BG120900 Rh6CG119100 Rh6DG107300 Rh6DG107500
rosa_wichuraiana	Rw0G005290 Rw0G005320 Rw6G010850 Rw6G010870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	221
AatII	GACGTC	2 cut(s)	140, 1060
Acc65I	GGTACC	1 cut(s)	239
AccB1I	GGYRCC	1 cut(s)	239
AccB7I	CCANNNNNTGG	1 cut(s)	1233
AccBSI	CCGCTC	1 cut(s)	1317
AccI	GTMKAC	1 cut(s)	432
AccII	CGCG	3 cut(s)	1272, 1274, 1388
AciI	CCGC	5 cut(s)	270, 838, 953, 1317, 1388
AclI	AACGTT	2 cut(s)	33, 501
AclWI	GGATC	4 cut(s)	68, 578, 947, 1443
AcoI	YGGCCR	5 cut(s)	43, 276, 438, 849, 1296
AcuI	CTGAAG	1 cut(s)	729
AcvI	CACGTG	1 cut(s)	1233
AcyI	GRCGYC	3 cut(s)	137, 675, 1057
AfaI	GTAC	5 cut(s)	241, 306, 521, 687, 1188
AfiI	CCNNNNNNNGG	4 cut(s)	847, 1150, 1233, 1305
AgsI	TTSAA	8 cut(s)	132, 221, 247, 562, 788, 896, 1040, 1457
AhdI	GACNNNNNGTC	1 cut(s)	1443
AjnI	CCWGG	1 cut(s)	935
AluBI	AGCT	9 cut(s)	335, 425, 547, 724, 749, 979, 1245, 1407, 1532
AluI	AGCT	9 cut(s)	335, 425, 547, 724, 749, 979, 1245, 1407, 1532
Alw21I	GWGCWC	1 cut(s)	337
Alw26I	GTCTC	5 cut(s)	43, 186, 658, 666, 1430
AlwI	GGATC	4 cut(s)	68, 578, 947, 1443
AlwNI	CAGNNNCTG	1 cut(s)	917
Ama87I	CYCGRG	2 cut(s)	485, 632
AoxI	GGCC	8 cut(s)	43, 276, 438, 453, 849, 1161, 1296, 1353
ApeKI	GCWGC	7 cut(s)	721, 749, 801, 872, 1077, 1108, 1397
Asp700I	GAANNNNTTC	1 cut(s)	961
Asp718I	GGTACC	1 cut(s)	239
AspLEI	GCGC	4 cut(s)	1272, 1274, 1276, 1402
AspS9I	GGNCC	3 cut(s)	1153, 1161, 1223
AsuHPI	GGTGA	4 cut(s)	630, 821, 1321, 1559
AvaI	CYCGRG	2 cut(s)	485, 632
AvaII	GGWCC	2 cut(s)	1153, 1223
BaeGI	GKGCMC	1 cut(s)	911
BanI	GGYRCC	1 cut(s)	239
BanII	GRGCYC	1 cut(s)	337
BbrPI	CACGTG	1 cut(s)	1233
BbsI	GAAGAC	1 cut(s)	1405
Bbv12I	GWGCWC	1 cut(s)	337
BbvI	GCAGC	7 cut(s)	733, 736, 813, 884, 1089, 1095, 1384
BccI	CCATC	3 cut(s)	1220, 1235, 1364
BceAI	ACGGC	5 cut(s)	104, 453, 836, 1148, 1283
BciT130I	CCWGG	1 cut(s)	937
BciVI	GTATCC	3 cut(s)	535, 893, 1440
BclI	TGATCA	2 cut(s)	1135, 1534
BcoDI	GTCTC	5 cut(s)	43, 186, 658, 666, 1430
BfaI	CTAG	2 cut(s)	731, 1112
BfmI	CTRYAG	1 cut(s)	750
BfuI	GTATCC	3 cut(s)	535, 893, 1440
BglI	GCCNNNNNGGC	1 cut(s)	125
BglII	AGATCT	2 cut(s)	444, 1251
BisI	GCNGC	7 cut(s)	722, 750, 802, 873, 1078, 1109, 1398
BlpI	GCTNAGC	1 cut(s)	1403
BlsI	GCNGC	7 cut(s)	723, 751, 803, 874, 1079, 1110, 1399
BmcAI	AGTACT	2 cut(s)	306, 687
Bme1390I	CCNGG	1 cut(s)	937
Bme18I	GGWCC	2 cut(s)	1153, 1223
BmeRI	GACNNNNNGTC	1 cut(s)	1443
BmeT110I	CYCGRG	2 cut(s)	485, 632
BmgT120I	GGNCC	3 cut(s)	1153, 1161, 1223
BmiI	GGNNCC	5 cut(s)	241, 268, 1155, 1224, 1225
BmrFI	CCNGG	1 cut(s)	937
BmrI	ACTGGG	1 cut(s)	158
BmsI	GCATC	2 cut(s)	591, 1185
BmuI	ACTGGG	1 cut(s)	158
BpiI	GAAGAC	1 cut(s)	1405
BplI	GAGNNNNNCTC	4 cut(s)	168, 200, 324, 356
BpmI	CTGGAG	1 cut(s)	586
Bpu10I	CCTNAGC	1 cut(s)	538
Bpu1102I	GCTNAGC	1 cut(s)	1403
BsaAI	YACGTR	2 cut(s)	523, 1233
BsaHI	GRCGYC	3 cut(s)	137, 675, 1057
BsaJI	CCNNGG	9 cut(s)	273, 486, 613, 805, 877, 935, 990, 1157, 1182
BsaXI	ACNNNNNCTCC	6 cut(s)	23, 53, 387, 417, 1457, 1487
Bsc4I	CCNNNNNNNGG	4 cut(s)	847, 1150, 1233, 1305
Bse118I	RCCGGY	2 cut(s)	278, 847
Bse1I	ACTGG	2 cut(s)	153, 569
Bse3DI	GCAATG	2 cut(s)	387, 1014
BseBI	CCWGG	1 cut(s)	937
BseDI	CCNNGG	9 cut(s)	273, 486, 613, 805, 877, 935, 990, 1157, 1182
BseGI	GGATG	1 cut(s)	781
BseLI	CCNNNNNNNGG	4 cut(s)	847, 1150, 1233, 1305
BseMI	GCAATG	2 cut(s)	387, 1014
BseMII	CTCAG	2 cut(s)	739, 1239
BseNI	ACTGG	2 cut(s)	153, 569
BsePI	GCGCGC	2 cut(s)	1270, 1272
BseRI	GAGGAG	2 cut(s)	329, 824
BseSI	GKGCMC	1 cut(s)	911
BseX3I	CGGCCG	2 cut(s)	438, 849
BseXI	GCAGC	7 cut(s)	733, 736, 813, 884, 1089, 1095, 1384
BseYI	CCCAGC	2 cut(s)	514, 1407
BsgI	GTGCAG	1 cut(s)	1303
Bsh1236I	CGCG	3 cut(s)	1272, 1274, 1388
Bsh1285I	CGRYCG	3 cut(s)	441, 852, 1131
BshFI	GGCC	8 cut(s)	45, 278, 440, 455, 851, 1163, 1298, 1355
BshNI	GGYRCC	1 cut(s)	239
BsiEI	CGRYCG	3 cut(s)	441, 852, 1131
BsiHKAI	GWGCWC	1 cut(s)	337
BsiHKCI	CYCGRG	2 cut(s)	485, 632
BsiSI	CCGG	6 cut(s)	42, 279, 312, 393, 452, 848
BslFI	GGGAC	2 cut(s)	1139, 1236
BslI	CCNNNNNNNGG	4 cut(s)	847, 1150, 1233, 1305
BsmAI	GTCTC	5 cut(s)	43, 186, 658, 666, 1430
BsmBI	CGTCTC	3 cut(s)	186, 666, 1430
BsmFI	GGGAC	2 cut(s)	1139, 1236
BsnI	GGCC	8 cut(s)	45, 278, 440, 455, 851, 1163, 1298, 1355
BsoBI	CYCGRG	2 cut(s)	485, 632
Bsp1286I	GDGCHC	2 cut(s)	337, 911
Bsp143I	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
Bsp1720I	GCTNAGC	1 cut(s)	1403
Bsp19I	CCATGG	1 cut(s)	1182
BspACI	CCGC	5 cut(s)	270, 838, 953, 1317, 1388
BspANI	GGCC	8 cut(s)	45, 278, 440, 455, 851, 1163, 1298, 1355
BspCNI	CTCAG	2 cut(s)	738, 1240
BspFNI	CGCG	3 cut(s)	1272, 1274, 1388
BspLI	GGNNCC	5 cut(s)	241, 268, 1155, 1224, 1225
BspMAI	CTGCAG	1 cut(s)	754
BspPI	GGATC	4 cut(s)	68, 578, 947, 1443
BspT107I	GGYRCC	1 cut(s)	239
BsrBI	CCGCTC	1 cut(s)	1317
BsrDI	GCAATG	2 cut(s)	387, 1014
BsrFI	RCCGGY	2 cut(s)	278, 847
BsrI	ACTGG	2 cut(s)	153, 569
BssAI	RCCGGY	2 cut(s)	278, 847
BssECI	CCNNGG	9 cut(s)	273, 486, 613, 805, 877, 935, 990, 1157, 1182
BssHII	GCGCGC	2 cut(s)	1270, 1272
BssMI	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
BssNI	GRCGYC	3 cut(s)	137, 675, 1057
BssT1I	CCWWGG	4 cut(s)	273, 805, 877, 1182
Bst2UI	CCWGG	1 cut(s)	937
Bst4CI	ACNGT	2 cut(s)	991, 1129
Bst6I	CTCTTC	2 cut(s)	191, 705
BstACI	GRCGYC	3 cut(s)	137, 675, 1057
BstBAI	YACGTR	2 cut(s)	523, 1233
BstC8I	GCNNGC	4 cut(s)	849, 1272, 1274, 1530
BstDEI	CTNAG	5 cut(s)	538, 725, 1248, 1403, 1524
BstDSI	CCRYGG	3 cut(s)	990, 1157, 1182
BstF5I	GGATG	1 cut(s)	781
BstFNI	CGCG	3 cut(s)	1272, 1274, 1388
BstHHI	GCGC	4 cut(s)	1272, 1274, 1276, 1402
BstKTI	GATC	9 cut(s)	76, 447, 573, 942, 1048, 1138, 1254, 1451, 1537
BstMAI	GTCTC	5 cut(s)	43, 186, 658, 666, 1430
BstMBI	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
BstMCI	CGRYCG	3 cut(s)	441, 852, 1131
BstMWI	GCNNNNNNNGC	4 cut(s)	125, 655, 992, 1394
BstNI	CCWGG	1 cut(s)	937
BstSCI	CCNGG	1 cut(s)	935
BstSFI	CTRYAG	1 cut(s)	750
BstSLI	GKGCMC	1 cut(s)	911
BstSNI	TACGTA	1 cut(s)	523
BstUI	CGCG	3 cut(s)	1272, 1274, 1388
BstV1I	GCAGC	7 cut(s)	733, 736, 813, 884, 1089, 1095, 1384
BstV2I	GAAGAC	1 cut(s)	1405
BstX2I	RGATCY	3 cut(s)	444, 939, 1251
BstXI	CCANNNNNNTGG	1 cut(s)	1219
BstYI	RGATCY	3 cut(s)	444, 939, 1251
BstZI	CGGCCG	2 cut(s)	438, 849
BsuI	GTATCC	3 cut(s)	535, 893, 1440
BsuRI	GGCC	8 cut(s)	45, 278, 440, 455, 851, 1163, 1298, 1355
BtgI	CCRYGG	3 cut(s)	990, 1157, 1182
BtgZI	GCGATG	1 cut(s)	1162
BtsCI	GGATG	1 cut(s)	781
Cac8I	GCNNGC	4 cut(s)	849, 1272, 1274, 1530
CaiI	CAGNNNCTG	1 cut(s)	917
CfoI	GCGC	4 cut(s)	1272, 1274, 1276, 1402
Cfr10I	RCCGGY	2 cut(s)	278, 847
Cfr13I	GGNCC	3 cut(s)	1153, 1161, 1223
CseI	GACGC	3 cut(s)	168, 683, 1447
Csp6I	GTAC	5 cut(s)	240, 305, 520, 686, 1187
CspCI	CAANNNNNGTGG	2 cut(s)	1008, 1043
CviAII	CATG	8 cut(s)	343, 373, 574, 628, 655, 1183, 1510, 1538
CviQI	GTAC	5 cut(s)	240, 305, 520, 686, 1187
DdeI	CTNAG	5 cut(s)	538, 725, 1248, 1403, 1524
DpnI	GATC	9 cut(s)	75, 446, 572, 941, 1047, 1137, 1253, 1450, 1536
DpnII	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
DrdI	GACNNNNNNGTC	1 cut(s)	221
DriI	GACNNNNNGTC	1 cut(s)	1443
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	5 cut(s)	43, 276, 438, 849, 1296
EagI	CGGCCG	2 cut(s)	438, 849
Eam1104I	CTCTTC	2 cut(s)	191, 705
Eam1105I	GACNNNNNGTC	1 cut(s)	1443
EarI	CTCTTC	2 cut(s)	191, 705
EciI	GGCGGA	2 cut(s)	259, 827
Ecl136II	GAGCTC	1 cut(s)	335
EclXI	CGGCCG	2 cut(s)	438, 849
Eco105I	TACGTA	1 cut(s)	523
Eco130I	CCWWGG	4 cut(s)	273, 805, 877, 1182
Eco24I	GRGCYC	1 cut(s)	337
Eco47I	GGWCC	2 cut(s)	1153, 1223
Eco52I	CGGCCG	2 cut(s)	438, 849
Eco53kI	GAGCTC	1 cut(s)	335
Eco57I	CTGAAG	1 cut(s)	729
Eco72I	CACGTG	1 cut(s)	1233
Eco88I	CYCGRG	2 cut(s)	485, 632
EcoICRI	GAGCTC	1 cut(s)	335
EcoO109I	RGGNCCY	2 cut(s)	1153, 1223
EcoRII	CCWGG	1 cut(s)	935
EcoT14I	CCWWGG	4 cut(s)	273, 805, 877, 1182
EcoT38I	GRGCYC	1 cut(s)	337
ErhI	CCWWGG	4 cut(s)	273, 805, 877, 1182
Esp3I	CGTCTC	3 cut(s)	186, 666, 1430
FaeI	CATG	8 cut(s)	346, 376, 577, 631, 658, 1186, 1513, 1541
FaqI	GGGAC	2 cut(s)	1139, 1236
FatI	CATG	8 cut(s)	342, 372, 573, 627, 654, 1182, 1509, 1537
FauI	CCCGC	3 cut(s)	946, 1310, 1381
FbaI	TGATCA	2 cut(s)	1135, 1534
FblI	GTMKAC	1 cut(s)	432
Fnu4HI	GCNGC	7 cut(s)	722, 750, 802, 873, 1078, 1109, 1398
FokI	GGATG	1 cut(s)	788
FriOI	GRGCYC	1 cut(s)	337
Fsp4HI	GCNGC	7 cut(s)	722, 750, 802, 873, 1078, 1109, 1398
FspBI	CTAG	2 cut(s)	731, 1112
GlaI	GCGC	4 cut(s)	1271, 1273, 1275, 1401
GluI	GCNGC	7 cut(s)	722, 750, 802, 873, 1078, 1109, 1398
GsaI	CCCAGC	2 cut(s)	518, 1411
GsuI	CTGGAG	1 cut(s)	586
HaeIII	GGCC	8 cut(s)	45, 278, 440, 455, 851, 1163, 1298, 1355
HapII	CCGG	6 cut(s)	42, 279, 312, 393, 452, 848
HgaI	GACGC	3 cut(s)	168, 683, 1447
HhaI	GCGC	4 cut(s)	1272, 1274, 1276, 1402
Hin1I	GRCGYC	3 cut(s)	137, 675, 1057
Hin1II	CATG	8 cut(s)	346, 376, 577, 631, 658, 1186, 1513, 1541
Hin6I	GCGC	4 cut(s)	1270, 1272, 1274, 1400
HinP1I	GCGC	4 cut(s)	1270, 1272, 1274, 1400
HincII	GTYRAC	1 cut(s)	499
HindII	GTYRAC	1 cut(s)	499
HinfI	GANTC	8 cut(s)	384, 635, 666, 716, 756, 767, 914, 957
HpaI	GTTAAC	1 cut(s)	499
HpaII	CCGG	6 cut(s)	42, 279, 312, 393, 452, 848
HphI	GGTGA	4 cut(s)	630, 821, 1321, 1559
Hpy166II	GTNNAC	4 cut(s)	433, 499, 1240, 1303
Hpy188I	TCNGA	5 cut(s)	292, 671, 709, 728, 1249
Hpy188III	TCNNGA	4 cut(s)	946, 1009, 1327, 1433
Hpy8I	GTNNAC	4 cut(s)	433, 499, 1240, 1303
Hpy99I	CGWCG	4 cut(s)	218, 1062, 1169, 1202
HpyAV	CCTTC	3 cut(s)	376, 806, 943
HpyCH4III	ACNGT	2 cut(s)	991, 1129
HpyCH4IV	ACGT	8 cut(s)	33, 137, 216, 501, 522, 643, 1057, 1232
HpyCH4V	TGCA	9 cut(s)	65, 590, 658, 752, 986, 1019, 1176, 1264, 1284
HpyF10VI	GCNNNNNNNGC	4 cut(s)	125, 655, 992, 1394
HpyF3I	CTNAG	5 cut(s)	538, 725, 1248, 1403, 1524
HpySE526I	ACGT	8 cut(s)	33, 137, 216, 501, 522, 643, 1057, 1232
Hsp92I	GRCGYC	3 cut(s)	137, 675, 1057
Hsp92II	CATG	8 cut(s)	346, 376, 577, 631, 658, 1186, 1513, 1541
HspAI	GCGC	4 cut(s)	1270, 1272, 1274, 1400
KflI	GGGWCCC	1 cut(s)	1223
KpnI	GGTACC	1 cut(s)	243
KroI	GCCGGC	1 cut(s)	847
KroNI	GCCGGC	1 cut(s)	849
Ksp22I	TGATCA	2 cut(s)	1135, 1534
KspAI	GTTAAC	1 cut(s)	499
Kzo9I	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
LmnI	GCTCC	6 cut(s)	176, 272, 332, 430, 552, 837
Lsp1109I	GCAGC	7 cut(s)	733, 736, 813, 884, 1089, 1095, 1384
LweI	GCATC	2 cut(s)	591, 1185
MaeI	CTAG	2 cut(s)	731, 1112
MaeII	ACGT	8 cut(s)	33, 137, 216, 501, 522, 643, 1057, 1232
MaeIII	GTNAC	3 cut(s)	636, 1309, 1547
MalI	GATC	9 cut(s)	75, 446, 572, 941, 1047, 1137, 1253, 1450, 1536
MbiI	CCGCTC	1 cut(s)	1317
MboI	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
MboII	GAAGA	7 cut(s)	178, 313, 696, 722, 934, 1405, 1469
MfeI	CAATTG	1 cut(s)	1362
MflI	RGATCY	3 cut(s)	444, 939, 1251
MhlI	GDGCHC	2 cut(s)	337, 911
MluCI	AATT	5 cut(s)	591, 600, 827, 1362, 1392
MlyI	GAGTC	4 cut(s)	644, 660, 761, 908
MmeI	TCCRAC	3 cut(s)	379, 552, 979
MroNI	GCCGGC	1 cut(s)	847
MroXI	GAANNNNTTC	1 cut(s)	961
MseI	TTAA	5 cut(s)	234, 498, 741, 866, 1515
MslI	CAYNNNNRTG	2 cut(s)	1181, 1328
MspI	CCGG	6 cut(s)	42, 279, 312, 393, 452, 848
MspR9I	CCNGG	1 cut(s)	937
MunI	CAATTG	1 cut(s)	1362
MvaI	CCWGG	1 cut(s)	937
MvnI	CGCG	3 cut(s)	1272, 1274, 1388
MwoI	GCNNNNNNNGC	4 cut(s)	125, 655, 992, 1394
NaeI	GCCGGC	1 cut(s)	849
NcoI	CCATGG	1 cut(s)	1182
NdeII	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
NgoMIV	GCCGGC	1 cut(s)	847
NlaIII	CATG	8 cut(s)	346, 376, 577, 631, 658, 1186, 1513, 1541
NlaIV	GGNNCC	5 cut(s)	241, 268, 1155, 1224, 1225
NmeAIII	GCCGAG	3 cut(s)	466, 558, 594
NmuCI	GTSAC	3 cut(s)	636, 1309, 1547
PauI	GCGCGC	2 cut(s)	1270, 1272
PcsI	WCGNNNNNNNCGW	2 cut(s)	222, 1054
PdiI	GCCGGC	1 cut(s)	849
PdmI	GAANNNNTTC	1 cut(s)	961
PfeI	GAWTC	4 cut(s)	384, 716, 756, 957
PflMI	CCANNNNNTGG	1 cut(s)	1233
PkrI	GCNGC	7 cut(s)	723, 751, 803, 874, 1079, 1110, 1399
PleI	GAGTC	4 cut(s)	643, 660, 761, 908
PmaCI	CACGTG	1 cut(s)	1233
PmlI	CACGTG	1 cut(s)	1233
PpsI	GAGTC	4 cut(s)	643, 660, 761, 908
Ppu21I	YACGTR	2 cut(s)	523, 1233
PpuMI	RGGWCCY	2 cut(s)	1153, 1223
Psp124BI	GAGCTC	1 cut(s)	337
Psp1406I	AACGTT	2 cut(s)	33, 501
Psp5II	RGGWCCY	2 cut(s)	1153, 1223
Psp6I	CCWGG	1 cut(s)	935
PspCI	CACGTG	1 cut(s)	1233
PspFI	CCCAGC	2 cut(s)	514, 1407
PspGI	CCWGG	1 cut(s)	935
PspN4I	GGNNCC	5 cut(s)	241, 268, 1155, 1224, 1225
PspPI	GGNCC	3 cut(s)	1153, 1161, 1223
PspPPI	RGGWCCY	2 cut(s)	1153, 1223
PstI	CTGCAG	1 cut(s)	754
PstNI	CAGNNNCTG	1 cut(s)	917
PsuI	RGATCY	3 cut(s)	444, 939, 1251
PteI	GCGCGC	2 cut(s)	1270, 1272
RsaI	GTAC	5 cut(s)	241, 306, 521, 687, 1188
RsaNI	GTAC	5 cut(s)	240, 305, 520, 686, 1187
RseI	CAYNNNNRTG	2 cut(s)	1181, 1328
SacI	GAGCTC	1 cut(s)	337
SaqAI	TTAA	5 cut(s)	234, 498, 741, 866, 1515
SatI	GCNGC	7 cut(s)	722, 750, 802, 873, 1078, 1109, 1398
Sau3AI	GATC	9 cut(s)	73, 444, 570, 939, 1045, 1135, 1251, 1448, 1534
Sau96I	GGNCC	3 cut(s)	1153, 1161, 1223
ScaI	AGTACT	2 cut(s)	306, 687
SchI	GAGTC	4 cut(s)	644, 660, 761, 908
ScrFI	CCNGG	1 cut(s)	937
SduI	GDGCHC	2 cut(s)	337, 911
SfaNI	GCATC	2 cut(s)	591, 1185
SfcI	CTRYAG	1 cut(s)	750
SinI	GGWCC	2 cut(s)	1153, 1223
SmiMI	CAYNNNNRTG	2 cut(s)	1181, 1328
SnaBI	TACGTA	1 cut(s)	523
Sse9I	AATT	5 cut(s)	591, 600, 827, 1362, 1392
SsiI	CCGC	5 cut(s)	270, 838, 953, 1317, 1388
SspMI	CTAG	2 cut(s)	731, 1112
SstI	GAGCTC	1 cut(s)	337
StyD4I	CCNGG	1 cut(s)	935
StyI	CCWWGG	4 cut(s)	273, 805, 877, 1182
TaaI	ACNGT	2 cut(s)	991, 1129
TaiI	ACGT	8 cut(s)	36, 140, 219, 504, 525, 646, 1060, 1235
TaqI	TCGA	4 cut(s)	225, 945, 1328, 1447
TasI	AATT	5 cut(s)	591, 600, 827, 1362, 1392
TatI	WGTACW	2 cut(s)	304, 685
TfiI	GAWTC	4 cut(s)	384, 716, 756, 957
Tru1I	TTAA	5 cut(s)	234, 498, 741, 866, 1515
Tru9I	TTAA	5 cut(s)	234, 498, 741, 866, 1515
TseFI	GTSAC	3 cut(s)	636, 1309, 1547
TseI	GCWGC	7 cut(s)	721, 749, 801, 872, 1077, 1108, 1397
Tsp45I	GTSAC	3 cut(s)	636, 1309, 1547
TspDTI	ATGAA	4 cut(s)	178, 376, 1183, 1332
TspGWI	ACGGA	1 cut(s)	1248
Van91I	CCANNNNNTGG	1 cut(s)	1233
VpaK11BI	GGWCC	2 cut(s)	1153, 1223
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1021
XmiI	GTMKAC	1 cut(s)	432
XmnI	GAANNNNTTC	1 cut(s)	961
XspI	CTAG	2 cut(s)	731, 1112
ZraI	GACGTC	2 cut(s)	138, 1058
ZrmI	AGTACT	2 cut(s)	306, 687

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.