Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000765

Physical Location & Seq

Genomic Coordinates Reverse (-)

51455510 .. 51458406

Gene Structure 2897 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014328

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGCTGACCGGAGAGCCGAGGAAAATGTCGTCTCCGGCCAACCCACCCAGAAAACCATTGCGGATTTCGATCCCGCACCCAAGCCCAAGAGAAACAAGTACGCTTTAGCTTGTGCCATGTTGGCTTCCATGACTTCGATCCTACTCGGTTATGGTAAATATTGGTGTAATGAGTGGAGCGGCAATCTTCATCAAAGACGACCTCCATATCTCCGACGTGCAGGTCGAAGTTCTAGTTGGATGAATCTCTACTCCCTCATCGGATCCGCAGCCGCCGGCAGGACGTCCGACTGGATTGGACGTCGGTATACCATAGTCCTCGCCGGAGCCATCTTCTTCGCCGGATCTCTTCTTATGGGCTTCGCCACCAACTACTCGTTCCTCATGTTCGGGAGATTTGTTGCTGGAATCGGCGTCCGTTATGCCCTCATGATTGCTCCTGTCTACACCGCCGAAGTTTCTCCGGCGTCGTCTCGTGGTTTCCTCACGTCTTTTGCTGATTTGTTTATCAATGTTGGAATCTTATTGGGGTACATATCCAACTGGGCCTTTTCCAAGCTAGCACTTAACCTAGGGTGGCGTTTCATGCTTGGCGTCGGCGCCATCCCCTCCGTCTTCCTTGCCATTGGCGTCTTAGCCATGCCGGAGTCCCCTCGCTGGCTGGTCATGCAAGGCCGCCTCGGAGACGCCAAGCAAGTCCTCGACCGAACCTCTGACTCCATGGAAGAGTCCAAACTCCGACTCGCCGACATCAAAGAAGCCGCTGGAATCCCTGAACACTACAACAACGATGTCGTTCAAGTCCCAAAACACAGCCATGGAGAAGACGTCTGGAAAAGGCTCATCCTCCACCCCACCCCCGCCGTCCGTCACATTCTCATCGCCACCGTCGGTATGCACTTCTTCCAACAAGCCTCCGGCATCGATGCCGTCGTTTTATATAGCCCGAGAATCTTCAAAAAGGCCGGAATCACGTCCAAGAACAAACTCCTCATCGCTACCATAGCTGTCGGATCCGTCAAGACAATCTTCATCCTCATCCCAACGTTTTTCCTGGACAGGATAGGACGTCGTCCTTTGCTTCTTTGCAGCATAGCAGGGATGATAGCCTCACTCGGCTGTCTCGGTTTCGGCCTCACCATCATCGACCACAGCAACGAAAAGATCATGTGGGCCATTGTGCTCTGCATCACCATGGTCTTATTCTACGTCGCGTTCTTCTCCATCGGAATGGGCCCTGTCACGTGGGTCTACAGCTCCGAGATCTTCCCGTTAAAGCTACGAGCTCAGGGATGTAGTATTGGAGTCGCTGTCAACAGAGTCGCTAGTGGAATAGTCTCAATGACTTTTATATCCCTGTACAAGGCCATAACCATTGGCGGAGCCTTCTTTCTTTATGCTGGAATTGCGGCGGTTGGCTGGGTGTTCTTATGTACAATGCTACCGGAGACACAGGGGATAACCCTTGAAGATATGGATGTTCTTTTTGGGAAGTTCCACAAGAGGAAACAGGCCAATGCCCTGCTCAAGAATAAGCAAGTGGATCCTAATAATAATAGAAACAAAGTCAAATATAACGAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005365 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015146 GO:0015148 GO:0015149 GO:0015166 GO:0015168 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015575 GO:0015576 GO:0015591 GO:0015672 GO:0015749 GO:0015750 GO:0015752 GO:0015753 GO:0015757 GO:0015791 GO:0015793 GO:0015795 GO:0015797 GO:0015798 GO:0015850 GO:0016020 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0042995 GO:0044464 GO:0046323 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090406 GO:0090696 GO:0090697 GO:0090698 GO:0098655 GO:0098660 GO:0098662 GO:0099402 GO:0120025 GO:1901618 GO:1902600 GO:1904659 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

529

Amino Acids

58.2

Weight (kDa)

9.79

Isoelectric Point (pI)

38.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	73 - 496	1.7e-101	Sugar (and other) transporter
MFS_1	PF07690	84 - 444	9.2e-24	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16120 AT2G16130 AT3G18830
fragaria_vesca	FvH4_2g08400 FvH4_2g08400 FvH4_2g08430 FvH4_2g08430 FvH4_2g08430
malus_domestica	MD05G1068600.v1.1 MD05G1068700.v1.1 MD05G1069100.v1.1 MD05G1069700.v1.1 MD10G1078900.v1.1 MD10G1079100.v1.1 MD10G1079200.v1.1 MD10G1079500.v1.1 MD10G1079600.v1.1 MD10G1079700.v1.1 MD10G1079800.v1.1 MD10G1079900.v1.1 MD10G1080000.v1.1 MD10G1080100.v1.1 MD10G1106100.v1.1 MD12G1026200.v1.1 MD17G1247200.v1.1
prunus_persica	Prupe.3G071100_v2.0.a1 Prupe.8G100700_v2.0.a1 Prupe.8G101000_v2.0.a1 Prupe.8G101200_v2.0.a1 Prupe.8G101500_v2.0.a1 Prupe.8G105300_v2.0.a1 Prupe.8G105400_v2.0.a1 Prupe.8G105500_v2.0.a1 Prupe.8G105600_v2.0.a1
pyrus_communis	pycom04g19030 pycom04g19050 pycom04g19090 pycom04g19120 pycom05g05990 pycom05g06030 pycom10g06180 pycom10g06270 pycom10g06280 pycom10g06300 pycom10g06330 pycom10g06340 pycom12g02550 pycom17g26280
rosa_chinensis	RchiOBHm_Chr6g0263471 RchiOBHm_Chr6g0263621 RchiOBHm_Chr6g0263691
rosa_laevigata	RLG00000014328 RLG00000014330
rosa_multiflora	Rmu_co8086996.1_g000001 Rmu_co8446581.1_g000001 Rmu_sc0000565.1_g000052 Rmu_sc0010495.1_g000011
rosa_roxburghii	Rroxscaffold_176G00431110 Rroxscaffold_7G00204150
rosa_rugosa	Rorug06G0005300 Rorug06G0005700
rosa_samantha	Rh6AG124800 Rh6BG120900 Rh6CG119100 Rh6DG107300 Rh6DG107500
rosa_wichuraiana	Rw0G005290 Rw0G005320 Rw6G010850 Rw6G010870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	222
AatII	GACGTC	4 cut(s)	287, 304, 831, 1072
Acc36I	ACCTGC	1 cut(s)	212
AccB1I	GGYRCC	1 cut(s)	599
AccBSI	CCGCTC	1 cut(s)	180
AccI	GTMKAC	3 cut(s)	308, 444, 1251
AccII	CGCG	1 cut(s)	1214
AclI	AACGTT	1 cut(s)	1046
AclWI	GGATC	9 cut(s)	65, 133, 258, 271, 352, 1008, 1021, 1538, 1551
AcoI	YGGCCR	1 cut(s)	37
AcvI	CACGTG	1 cut(s)	1245
AfaI	GTAC	4 cut(s)	101, 533, 1361, 1435
AfiI	CCNNNNNNNGG	3 cut(s)	279, 657, 1363
AgsI	TTSAA	3 cut(s)	800, 958, 1469
AjiI	CACGTC	3 cut(s)	218, 489, 975
AjnI	CCWGG	1 cut(s)	1053
AjuI	GAANNNNNNNTTGG	4 cut(s)	220, 252, 362, 394
AluBI	AGCT	6 cut(s)	110, 559, 1007, 1257, 1279, 1286
AluI	AGCT	6 cut(s)	110, 559, 1007, 1257, 1279, 1286
Alw21I	GWGCWC	2 cut(s)	1185, 1288
Alw26I	GTCTC	6 cut(s)	37, 477, 678, 1127, 1342, 1442
AlwI	GGATC	9 cut(s)	65, 133, 258, 271, 352, 1008, 1021, 1538, 1551
Ama87I	CYCGRG	1 cut(s)	946
AoxI	GGCC	9 cut(s)	37, 546, 673, 963, 1132, 1173, 1234, 1365, 1512
ApaI	GGGCCC	1 cut(s)	1238
ApeKI	GCWGC	2 cut(s)	269, 1089
AspA2I	CCTAGG	1 cut(s)	571
AspLEI	GCGC	1 cut(s)	602
AspS9I	GGNCC	4 cut(s)	546, 1173, 1234, 1235
AsuHPI	GGTGA	2 cut(s)	1129, 1183
AsuNHI	GCTAGC	1 cut(s)	559
AvaI	CYCGRG	1 cut(s)	946
AvrII	CCTAGG	1 cut(s)	571
BaeGI	GKGCMC	1 cut(s)	1238
BamHI	GGATCC	3 cut(s)	263, 1013, 1543
BanI	GGYRCC	1 cut(s)	599
BanII	GRGCYC	2 cut(s)	1238, 1288
BauI	CACGAG	1 cut(s)	474
BbrPI	CACGTG	1 cut(s)	1245
BbsI	GAAGAC	2 cut(s)	607, 831
Bbv12I	GWGCWC	2 cut(s)	1185, 1288
BbvI	GCAGC	2 cut(s)	281, 1101
BccI	CCATC	4 cut(s)	338, 611, 1148, 1232
BceAI	ACGGC	2 cut(s)	848, 914
BciT130I	CCWGG	1 cut(s)	1055
BcoDI	GTCTC	6 cut(s)	37, 477, 678, 1127, 1342, 1442
BfaI	CTAG	4 cut(s)	234, 560, 572, 1326
BfmI	CTRYAG	1 cut(s)	1252
BfoI	RGCGCY	1 cut(s)	603
BfuAI	ACCTGC	1 cut(s)	212
BglI	GCCNNNNNGGC	1 cut(s)	122
BglII	AGATCT	1 cut(s)	1263
BisI	GCNGC	7 cut(s)	181, 270, 273, 676, 762, 1090, 1410
BlnI	CCTAGG	1 cut(s)	571
BlsI	GCNGC	7 cut(s)	182, 271, 274, 677, 763, 1091, 1411
Bme1390I	CCNGG	1 cut(s)	1055
BmeT110I	CYCGRG	1 cut(s)	946
BmgBI	CACGTC	3 cut(s)	218, 489, 975
BmgT120I	GGNCC	4 cut(s)	546, 1173, 1234, 1235
BmiI	GGNNCC	7 cut(s)	265, 328, 601, 1015, 1236, 1384, 1545
BmrFI	CCNGG	1 cut(s)	1055
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	3 cut(s)	916, 930, 1197
BmtI	GCTAGC	1 cut(s)	563
BmuI	ACTGGG	1 cut(s)	553
BpiI	GAAGAC	2 cut(s)	607, 831
Bpu10I	CCTNAGC	1 cut(s)	1287
BpuEI	CTTGAG	1 cut(s)	1511
Bsa29I	ATCGAT	1 cut(s)	924
BsaAI	YACGTR	1 cut(s)	1245
BsaBI	GATNNNNATC	1 cut(s)	69
BsaJI	CCNNGG	6 cut(s)	18, 571, 679, 720, 817, 1194
BsaWI	WCCGGW	2 cut(s)	9, 1444
BsaXI	ACNNNNNCTCC	4 cut(s)	813, 843, 1296, 1326
Bsc4I	CCNNNNNNNGG	3 cut(s)	279, 657, 1363
Bse118I	RCCGGY	1 cut(s)	275
Bse1I	ACTGG	2 cut(s)	296, 548
Bse3DI	GCAATG	1 cut(s)	57
Bse8I	GATNNNNATC	1 cut(s)	69
BseBI	CCWGG	1 cut(s)	1055
BseCI	ATCGAT	1 cut(s)	924
BseDI	CCNNGG	6 cut(s)	18, 571, 679, 720, 817, 1194
BseGI	GGATG	8 cut(s)	246, 603, 843, 1032, 1038, 1107, 1298, 1483
BseJI	GATNNNNATC	1 cut(s)	69
BseLI	CCNNNNNNNGG	3 cut(s)	279, 657, 1363
BseMI	GCAATG	1 cut(s)	57
BseMII	CTCAG	1 cut(s)	1301
BseNI	ACTGG	2 cut(s)	296, 548
BseRI	GAGGAG	1 cut(s)	980
BseSI	GKGCMC	1 cut(s)	1238
BseXI	GCAGC	2 cut(s)	281, 1101
BseYI	CCCAGC	1 cut(s)	1419
BsgI	GTGCAG	1 cut(s)	240
Bsh1236I	CGCG	1 cut(s)	1214
Bsh1285I	CGRYCG	1 cut(s)	706
BshFI	GGCC	9 cut(s)	39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BshNI	GGYRCC	1 cut(s)	599
BshVI	ATCGAT	1 cut(s)	924
BsiEI	CGRYCG	1 cut(s)	706
BsiHKAI	GWGCWC	2 cut(s)	1185, 1288
BsiHKCI	CYCGRG	1 cut(s)	946
BslFI	GGGAC	2 cut(s)	634, 788
BslI	CCNNNNNNNGG	3 cut(s)	279, 657, 1363
BsmAI	GTCTC	6 cut(s)	37, 477, 678, 1127, 1342, 1442
BsmBI	CGTCTC	3 cut(s)	37, 477, 678
BsmFI	GGGAC	2 cut(s)	634, 788
BsnI	GGCC	9 cut(s)	39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BsoBI	CYCGRG	1 cut(s)	946
Bsp120I	GGGCCC	1 cut(s)	1234
Bsp1286I	GDGCHC	3 cut(s)	1185, 1238, 1288
Bsp1407I	TGTACA	2 cut(s)	1359, 1433
Bsp143I	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
Bsp19I	CCATGG	3 cut(s)	720, 817, 1194
BspANI	GGCC	9 cut(s)	39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BspCNI	CTCAG	1 cut(s)	1300
BspDI	ATCGAT	1 cut(s)	924
BspFNI	CGCG	1 cut(s)	1214
BspHI	TCATGA	1 cut(s)	429
BspLI	GGNNCC	7 cut(s)	265, 328, 601, 1015, 1236, 1384, 1545
BspMI	ACCTGC	1 cut(s)	212
BspOI	GCTAGC	1 cut(s)	563
BspPI	GGATC	9 cut(s)	65, 133, 258, 271, 352, 1008, 1021, 1538, 1551
BspT107I	GGYRCC	1 cut(s)	599
BsrBI	CCGCTC	1 cut(s)	180
BsrDI	GCAATG	1 cut(s)	57
BsrFI	RCCGGY	1 cut(s)	275
BsrGI	TGTACA	2 cut(s)	1359, 1433
BsrI	ACTGG	2 cut(s)	296, 548
BssAI	RCCGGY	1 cut(s)	275
BssECI	CCNNGG	6 cut(s)	18, 571, 679, 720, 817, 1194
BssMI	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
BssNAI	GTATAC	1 cut(s)	309
BssSI	CACGAG	1 cut(s)	474
BssT1I	CCWWGG	4 cut(s)	571, 720, 817, 1194
Bst1107I	GTATAC	1 cut(s)	309
Bst2BI	CACGAG	1 cut(s)	474
Bst2UI	CCWGG	1 cut(s)	1055
Bst4CI	ACNGT	1 cut(s)	889
Bst6I	CTCTTC	2 cut(s)	354, 720
BstAUI	TGTACA	2 cut(s)	1359, 1433
BstBAI	YACGTR	1 cut(s)	1245
BstC8I	GCNNGC	3 cut(s)	277, 561, 659
BstDEI	CTNAG	2 cut(s)	634, 1287
BstDSI	CCRYGG	3 cut(s)	720, 817, 1194
BstENI	CCTNNNNNAGG	1 cut(s)	1361
BstF5I	GGATG	8 cut(s)	246, 603, 843, 1032, 1038, 1107, 1298, 1483
BstFNI	CGCG	1 cut(s)	1214
BstH2I	RGCGCY	1 cut(s)	603
BstHHI	GCGC	1 cut(s)	602
BstKTI	GATC	8 cut(s)	73, 141, 266, 347, 1016, 1167, 1266, 1546
BstMAI	GTCTC	6 cut(s)	37, 477, 678, 1127, 1342, 1442
BstMBI	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
BstMCI	CGRYCG	1 cut(s)	706
BstMWI	GCNNNNNNNGC	5 cut(s)	122, 586, 667, 1004, 1406
BstNI	CCWGG	1 cut(s)	1055
BstSCI	CCNGG	1 cut(s)	1053
BstSFI	CTRYAG	1 cut(s)	1252
BstSLI	GKGCMC	1 cut(s)	1238
BstUI	CGCG	1 cut(s)	1214
BstV1I	GCAGC	2 cut(s)	281, 1101
BstV2I	GAAGAC	2 cut(s)	607, 831
BstX2I	RGATCY	5 cut(s)	263, 344, 1013, 1263, 1543
BstXI	CCANNNNNNTGG	1 cut(s)	1231
BstYI	RGATCY	5 cut(s)	263, 344, 1013, 1263, 1543
BstZ17I	GTATAC	1 cut(s)	309
Bsu15I	ATCGAT	1 cut(s)	924
BsuRI	GGCC	9 cut(s)	39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
BsuTUI	ATCGAT	1 cut(s)	924
BtgI	CCRYGG	3 cut(s)	720, 817, 1194
BtgZI	GCGATG	2 cut(s)	865, 979
BtrI	CACGTC	3 cut(s)	218, 489, 975
BtsCI	GGATG	8 cut(s)	246, 603, 843, 1032, 1038, 1107, 1298, 1483
BveI	ACCTGC	1 cut(s)	212
Cac8I	GCNNGC	3 cut(s)	277, 561, 659
CciI	TCATGA	1 cut(s)	429
CfoI	GCGC	1 cut(s)	602
Cfr10I	RCCGGY	1 cut(s)	275
Cfr13I	GGNCC	4 cut(s)	546, 1173, 1234, 1235
ClaI	ATCGAT	1 cut(s)	924
CseI	GACGC	5 cut(s)	403, 456, 583, 619, 695
Csp6I	GTAC	4 cut(s)	100, 532, 1360, 1434
CviQI	GTAC	4 cut(s)	100, 532, 1360, 1434
DdeI	CTNAG	2 cut(s)	634, 1287
DinI	GGCGCC	1 cut(s)	601
DpnI	GATC	8 cut(s)	72, 140, 265, 346, 1015, 1166, 1265, 1545
DpnII	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
DrdI	GACNNNNNNGTC	1 cut(s)	222
DseDI	GACNNNNNNGTC	1 cut(s)	222
EaeI	YGGCCR	1 cut(s)	37
Eam1104I	CTCTTC	2 cut(s)	354, 720
EarI	CTCTTC	2 cut(s)	354, 720
EciI	GGCGGA	1 cut(s)	1395
Ecl136II	GAGCTC	1 cut(s)	1286
Eco130I	CCWWGG	4 cut(s)	571, 720, 817, 1194
Eco24I	GRGCYC	2 cut(s)	1238, 1288
Eco53kI	GAGCTC	1 cut(s)	1286
Eco72I	CACGTG	1 cut(s)	1245
Eco88I	CYCGRG	1 cut(s)	946
EcoICRI	GAGCTC	1 cut(s)	1286
EcoNI	CCTNNNNNAGG	1 cut(s)	1361
EcoO109I	RGGNCCY	1 cut(s)	1235
EcoRII	CCWGG	1 cut(s)	1053
EcoT14I	CCWWGG	4 cut(s)	571, 720, 817, 1194
EcoT38I	GRGCYC	2 cut(s)	1238, 1288
EgeI	GGCGCC	1 cut(s)	601
EheI	GGCGCC	1 cut(s)	601
ErhI	CCWWGG	4 cut(s)	571, 720, 817, 1194
Esp3I	CGTCTC	3 cut(s)	37, 477, 678
FalI	AAGNNNNNCTT	2 cut(s)	1013, 1045
FaqI	GGGAC	2 cut(s)	634, 788
FauI	CCCGC	2 cut(s)	82, 868
FblI	GTMKAC	3 cut(s)	308, 444, 1251
Fnu4HI	GCNGC	7 cut(s)	181, 270, 273, 676, 762, 1090, 1410
FokI	GGATG	8 cut(s)	253, 590, 830, 1019, 1025, 1114, 1305, 1490
FriOI	GRGCYC	2 cut(s)	1238, 1288
Fsp4HI	GCNGC	7 cut(s)	181, 270, 273, 676, 762, 1090, 1410
FspBI	CTAG	4 cut(s)	234, 560, 572, 1326
GlaI	GCGC	1 cut(s)	601
GluI	GCNGC	7 cut(s)	181, 270, 273, 676, 762, 1090, 1410
GsaI	CCCAGC	1 cut(s)	1423
HaeII	RGCGCY	1 cut(s)	603
HaeIII	GGCC	9 cut(s)	39, 548, 675, 965, 1134, 1175, 1236, 1367, 1514
HgaI	GACGC	5 cut(s)	403, 456, 583, 619, 695
HhaI	GCGC	1 cut(s)	602
Hin6I	GCGC	1 cut(s)	600
HinP1I	GCGC	1 cut(s)	600
HincII	GTYRAC	1 cut(s)	1315
HindII	GTYRAC	1 cut(s)	1315
HphI	GGTGA	2 cut(s)	1129, 1183
Hpy166II	GTNNAC	4 cut(s)	309, 445, 1252, 1315
Hpy188I	TCNGA	9 cut(s)	215, 263, 289, 683, 715, 740, 1013, 1229, 1261
Hpy188III	TCNNGA	5 cut(s)	391, 430, 832, 1021, 1528
Hpy8I	GTNNAC	4 cut(s)	309, 445, 1252, 1315
Hpy99I	CGWCG	8 cut(s)	219, 306, 472, 599, 893, 935, 1074, 1214
HpyAV	CCTTC	1 cut(s)	1396
HpyCH4III	ACNGT	1 cut(s)	889
HpyCH4V	TGCA	5 cut(s)	221, 670, 898, 1089, 1188
HpyF10VI	GCNNNNNNNGC	5 cut(s)	122, 586, 667, 1004, 1406
HpyF3I	CTNAG	2 cut(s)	634, 1287
HspAI	GCGC	1 cut(s)	600
KasI	GGCGCC	1 cut(s)	599
KroI	GCCGGC	1 cut(s)	275
KroNI	GCCGGC	1 cut(s)	277
Kzo9I	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
LmnI	GCTCC	5 cut(s)	177, 326, 442, 1262, 1382
Lsp1109I	GCAGC	2 cut(s)	281, 1101
LweI	GCATC	3 cut(s)	916, 930, 1197
MaeI	CTAG	4 cut(s)	234, 560, 572, 1326
MaeIII	GTNAC	2 cut(s)	869, 1240
MalI	GATC	8 cut(s)	72, 140, 265, 346, 1015, 1166, 1265, 1545
MbiI	CCGCTC	1 cut(s)	180
MboI	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
MflI	RGATCY	5 cut(s)	263, 344, 1013, 1263, 1543
MhlI	GDGCHC	3 cut(s)	1185, 1238, 1288
MluCI	AATT	1 cut(s)	1404
Mly113I	GGCGCC	1 cut(s)	600
MlyI	GAGTC	6 cut(s)	656, 710, 735, 737, 1314, 1329
MmeI	TCCRAC	8 cut(s)	218, 238, 312, 496, 564, 763, 931, 991
MroNI	GCCGGC	1 cut(s)	275
MseI	TTAA	2 cut(s)	567, 1274
MslI	CAYNNNNRTG	3 cut(s)	816, 1193, 1229
MspA1I	CMGCKG	1 cut(s)	764
MspR9I	CCNGG	1 cut(s)	1055
MvaI	CCWGG	1 cut(s)	1055
MvnI	CGCG	1 cut(s)	1214
MwoI	GCNNNNNNNGC	5 cut(s)	122, 586, 667, 1004, 1406
NaeI	GCCGGC	1 cut(s)	277
NarI	GGCGCC	1 cut(s)	600
NcoI	CCATGG	3 cut(s)	720, 817, 1194
NdeII	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
NgoMIV	GCCGGC	1 cut(s)	275
NheI	GCTAGC	1 cut(s)	559
NlaIV	GGNNCC	7 cut(s)	265, 328, 601, 1015, 1236, 1384, 1545
NmeAIII	GCCGAG	2 cut(s)	43, 1095
NmuCI	GTSAC	2 cut(s)	869, 1240
PagI	TCATGA	1 cut(s)	429
PcsI	WCGNNNNNNNCGW	2 cut(s)	223, 930
PdiI	GCCGGC	1 cut(s)	277
PfeI	GAWTC	6 cut(s)	244, 408, 519, 768, 951, 969
PflFI	GACNNNGTC	1 cut(s)	1071
PfoI	TCCNGGA	1 cut(s)	1053
PkrI	GCNGC	7 cut(s)	182, 271, 274, 677, 763, 1091, 1411
PleI	GAGTC	6 cut(s)	655, 710, 735, 736, 1313, 1328
PluTI	GGCGCC	1 cut(s)	603
PmaCI	CACGTG	1 cut(s)	1245
PmlI	CACGTG	1 cut(s)	1245
PpsI	GAGTC	6 cut(s)	655, 710, 735, 736, 1313, 1328
Ppu21I	YACGTR	1 cut(s)	1245
Psp124BI	GAGCTC	1 cut(s)	1288
Psp1406I	AACGTT	1 cut(s)	1046
Psp6I	CCWGG	1 cut(s)	1053
PspCI	CACGTG	1 cut(s)	1245
PspFI	CCCAGC	1 cut(s)	1419
PspGI	CCWGG	1 cut(s)	1053
PspN4I	GGNNCC	7 cut(s)	265, 328, 601, 1015, 1236, 1384, 1545
PspOMI	GGGCCC	1 cut(s)	1234
PspPI	GGNCC	4 cut(s)	546, 1173, 1234, 1235
PsuI	RGATCY	5 cut(s)	263, 344, 1013, 1263, 1543
PsyI	GACNNNGTC	1 cut(s)	1071
RsaI	GTAC	4 cut(s)	101, 533, 1361, 1435
RsaNI	GTAC	4 cut(s)	100, 532, 1360, 1434
RseI	CAYNNNNRTG	3 cut(s)	816, 1193, 1229
SacI	GAGCTC	1 cut(s)	1288
SaqAI	TTAA	2 cut(s)	567, 1274
SatI	GCNGC	7 cut(s)	181, 270, 273, 676, 762, 1090, 1410
Sau3AI	GATC	8 cut(s)	70, 138, 263, 344, 1013, 1164, 1263, 1543
Sau96I	GGNCC	4 cut(s)	546, 1173, 1234, 1235
SchI	GAGTC	6 cut(s)	656, 710, 735, 737, 1314, 1329
ScrFI	CCNGG	1 cut(s)	1055
SduI	GDGCHC	3 cut(s)	1185, 1238, 1288
SfaNI	GCATC	3 cut(s)	916, 930, 1197
SfcI	CTRYAG	1 cut(s)	1252
SfoI	GGCGCC	1 cut(s)	601
SmiMI	CAYNNNNRTG	3 cut(s)	816, 1193, 1229
SmlI	CTYRAG	1 cut(s)	1526
SmoI	CTYRAG	1 cut(s)	1526
Sse9I	AATT	1 cut(s)	1404
SspDI	GGCGCC	1 cut(s)	599
SspI	AATATT	1 cut(s)	161
SspMI	CTAG	4 cut(s)	234, 560, 572, 1326
SstI	GAGCTC	1 cut(s)	1288
StyD4I	CCNGG	1 cut(s)	1053
StyI	CCWWGG	4 cut(s)	571, 720, 817, 1194
TaaI	ACNGT	1 cut(s)	889
TaqI	TCGA	6 cut(s)	69, 137, 226, 702, 924, 1146
TaqII	GACCGA	1 cut(s)	720
TasI	AATT	1 cut(s)	1404
TatI	WGTACW	2 cut(s)	1359, 1433
TauI	GCSGC	5 cut(s)	183, 275, 678, 764, 1412
TfiI	GAWTC	6 cut(s)	244, 408, 519, 768, 951, 969
Tru1I	TTAA	2 cut(s)	567, 1274
Tru9I	TTAA	2 cut(s)	567, 1274
TseFI	GTSAC	2 cut(s)	869, 1240
TseI	GCWGC	2 cut(s)	269, 1089
Tsp45I	GTSAC	2 cut(s)	869, 1240
TspDTI	ATGAA	4 cut(s)	179, 257, 574, 1021
TspGWI	ACGGA	4 cut(s)	407, 601, 857, 1006
Tth111I	GACNNNGTC	1 cut(s)	1071
XagI	CCTNNNNNAGG	1 cut(s)	1361
XmaJI	CCTAGG	1 cut(s)	571
XmiI	GTMKAC	3 cut(s)	308, 444, 1251
XspI	CTAG	4 cut(s)	234, 560, 572, 1326
ZraI	GACGTC	4 cut(s)	285, 302, 829, 1070

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.