Cupin-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26135 AT5G19840 AT5G19840 |
| fragaria_vesca | FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 FvH4_2g22940 |
| malus_domestica | MD03G1258000.v1.1 MD03G1258100.v1.1 MD11G1278700.v1.1 |
| prunus_persica | Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 Prupe.8G234700_v2.0.a1 |
| pyrus_communis | pycom03g20440 pycom11g24620 pycom11g24630 |
| rosa_chinensis | RchiOBHm_Chr6g0289901 RchiOBHm_Chr6g0289911 RchiOBHm_Chr6g0289951 |
| rosa_laevigata | RLG00000012257 |
| rosa_multiflora | Rmu_sc0001312.1_g000002 Rmu_sc0023926.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00177480 |
| rosa_rugosa | Rorug06G0208000 |
| rosa_samantha | Rh6AG319300 Rh6BG326300 Rh6BG326400 Rh6CG332300 Rh6DG318000 Rh6DG318100 |
| rosa_wichuraiana | Rw0G009780 Rw0G009800 Rw6G027540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 133 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 52 |
| AluBI | AGCT | 1 cut(s) | 122 |
| AluI | AGCT | 1 cut(s) | 122 |
| ApeKI | GCWGC | 1 cut(s) | 94 |
| AsuHPI | GGTGA | 1 cut(s) | 44 |
| BbsI | GAAGAC | 1 cut(s) | 164 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BceAI | ACGGC | 2 cut(s) | 30, 49 |
| BfaI | CTAG | 1 cut(s) | 168 |
| BisI | GCNGC | 1 cut(s) | 95 |
| BlsI | GCNGC | 1 cut(s) | 96 |
| BmiI | GGNNCC | 1 cut(s) | 18 |
| BmsI | GCATC | 1 cut(s) | 133 |
| BpiI | GAAGAC | 1 cut(s) | 164 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 33 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 52 |
| Bse3DI | GCAATG | 1 cut(s) | 59 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 52 |
| BseMI | GCAATG | 1 cut(s) | 59 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 52 |
| Bsp143I | GATC | 1 cut(s) | 125 |
| BspHI | TCATGA | 1 cut(s) | 153 |
| BspLI | GGNNCC | 1 cut(s) | 18 |
| BsrDI | GCAATG | 1 cut(s) | 59 |
| BssMI | GATC | 1 cut(s) | 125 |
| BstC8I | GCNNGC | 1 cut(s) | 92 |
| BstKTI | GATC | 1 cut(s) | 128 |
| BstMBI | GATC | 1 cut(s) | 125 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| BstV2I | GAAGAC | 1 cut(s) | 164 |
| Cac8I | GCNNGC | 1 cut(s) | 92 |
| CciI | TCATGA | 1 cut(s) | 153 |
| Csp6I | GTAC | 1 cut(s) | 132 |
| CviAII | CATG | 3 cut(s) | 21, 47, 154 |
| CviJI | RGCY | 3 cut(s) | 17, 45, 122 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 45, 122 |
| CviQI | GTAC | 1 cut(s) | 132 |
| DpnI | GATC | 1 cut(s) | 127 |
| DpnII | GATC | 1 cut(s) | 125 |
| Eco32I | GATATC | 1 cut(s) | 37 |
| EcoRV | GATATC | 1 cut(s) | 37 |
| FaeI | CATG | 3 cut(s) | 24, 50, 157 |
| FaiI | YATR | 6 cut(s) | 22, 48, 99, 101, 141, 155 |
| FatI | CATG | 3 cut(s) | 20, 46, 153 |
| FauNDI | CATATG | 1 cut(s) | 99 |
| Fnu4HI | GCNGC | 1 cut(s) | 95 |
| Fsp4HI | GCNGC | 1 cut(s) | 95 |
| FspBI | CTAG | 1 cut(s) | 168 |
| GluI | GCNGC | 1 cut(s) | 95 |
| Hin1II | CATG | 3 cut(s) | 24, 50, 157 |
| HinfI | GANTC | 1 cut(s) | 84 |
| HphI | GGTGA | 1 cut(s) | 44 |
| Hpy188I | TCNGA | 1 cut(s) | 41 |
| Hpy188III | TCNNGA | 1 cut(s) | 154 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 2 cut(s) | 90, 146 |
| Hsp92II | CATG | 3 cut(s) | 24, 50, 157 |
| Kzo9I | GATC | 1 cut(s) | 125 |
| LmnI | GCTCC | 1 cut(s) | 22 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| LweI | GCATC | 1 cut(s) | 133 |
| MaeI | CTAG | 1 cut(s) | 168 |
| MalI | GATC | 1 cut(s) | 127 |
| MboI | GATC | 1 cut(s) | 125 |
| MboII | GAAGA | 1 cut(s) | 169 |
| MnlI | CCTC | 2 cut(s) | 3, 45 |
| MseI | TTAA | 1 cut(s) | 27 |
| MslI | CAYNNNNRTG | 2 cut(s) | 102, 141 |
| NdeI | CATATG | 1 cut(s) | 99 |
| NdeII | GATC | 1 cut(s) | 125 |
| NlaIII | CATG | 3 cut(s) | 24, 50, 157 |
| NlaIV | GGNNCC | 1 cut(s) | 18 |
| PagI | TCATGA | 1 cut(s) | 153 |
| PfeI | GAWTC | 1 cut(s) | 84 |
| PkrI | GCNGC | 1 cut(s) | 96 |
| PspN4I | GGNNCC | 1 cut(s) | 18 |
| RsaI | GTAC | 1 cut(s) | 133 |
| RsaNI | GTAC | 1 cut(s) | 132 |
| RseI | CAYNNNNRTG | 2 cut(s) | 102, 141 |
| SaqAI | TTAA | 1 cut(s) | 27 |
| SatI | GCNGC | 1 cut(s) | 95 |
| Sau3AI | GATC | 1 cut(s) | 125 |
| SetI | ASST | 2 cut(s) | 124, 180 |
| SfaNI | GCATC | 1 cut(s) | 133 |
| SgeI | CNNG | 8 cut(s) | 21, 33, 59, 82, 103, 135, 141, 166 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 102, 141 |
| SspMI | CTAG | 1 cut(s) | 168 |
| TaqI | TCGA | 2 cut(s) | 8, 124 |
| TfiI | GAWTC | 1 cut(s) | 84 |
| Tru1I | TTAA | 1 cut(s) | 27 |
| Tru9I | TTAA | 1 cut(s) | 27 |
| TseI | GCWGC | 1 cut(s) | 94 |
| TspDTI | ATGAA | 2 cut(s) | 142, 170 |
| XspI | CTAG | 1 cut(s) | 168 |