Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005422

Physical Location & Seq

Genomic Coordinates Reverse (-)

16886226 .. 16889171

Gene Structure 2946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G45940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGGCTTCTTGTCTTTCTCTTCTTGTTGCTATTATCCTCTGCTTCTCATCTCTCCAGTGTTCCAACGCCATCGGCAAAGGCTACCGTCTGATCTCCATGGAGAAGTCTCCCGATGATGGCAGCTTCATTGGCTATCTCCAAGTGAAGCAGAGTAACAAAATCTACGGCTCTGATATAACCATCCTTCGACTCTTCATCAACTACAGAACGGATCATCGCCTTCGCGTTCACATTACAGACGCAAAGAAACAACGATGGGAAGTTCCGTACAATCTCCTCCGCCGGGAACAACCACCGAATGTAATCGGAAAATCAAGAAAATCTCCGGTTACGGTACAAGAAATATCCGGACCGGAGCTGATTTTAATCTTCACCGTAGATCCTTTCAGCTTCGCCGTAAGAAGAAGATCCAACGGCGAGACGATTTTCAACACTAGTAGCTCCGATGAGTCATTCGGAGAGATGGTGTTCAAGGACCAGTACCTCGAGATCTCAACTTCTTTACCTAAAGACGCGTCTCTATACGGATTTGGTGAAAACTCTCAAGCCAATGGAATCAAACTGGTTCCTAATGAGCCATACACTCTCTTCACTGAAGACGTCTCGGCGTTTAATCTCAACACTGATCTTTACGGGTCGCATCCGGTTTACATGGATTTGAGAAACGTTAGTGGTAAAGCCTATGCACACTCTGTTCTGCTTCTTAACAGTCATGGTATGGATGTGTTTTACAGAGGCGATTCCTTGACGTACAAGGTAATTGGAGGTGTTTTTGATTTCTATTTCTTCGCTGGACCGTCGCCTCTTAATGTCGTTGATCAATACACTTCGTTAATAGGACGGCCAGCGCCAATGCCGTACTGGTCTCTAGGGTTTCACCAATGTAGATGGGGGTACCGTAATGTATCAGTTGTTAAAGATGTGGTGGATAATTACCAAAAGGCTAAGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCACTTTGGATCTTGTGAATTTTCCTCATGCTAAGCTATTGAGTTTCTTGGATAGAATCCATAAGATGGGAATGAAGTATGTTGTGATAAAAGATCCTGGTATTGGTGTCAACGCGAGTTACGGTGTATACCAAAGAGGCATGGCTAGTGATGTGTTCATTAAATATGAAGGAAAGCCTTTCTTGGCTCAAGTGTGGCCTGGTCCAGTTTACTTCCCTGATTTCCTTAACCCGAAAACGGTTTCTTGGTGGGGCGATGAAATTCGACGTTTCCATGAGTTAGTACCCATTGATGGTCTTTGGATCGACATGAATGAGATCAATGCTACTGGACACAAAGCTTCTCTAGGGTTCAAGACTATTCCCACAAGTGCTTATCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGGCCATAGCGACCCACAAGGCCTTGCTTGCTGTCCAAGGCAAACGTCCATTTATATTGTCACGGTCCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAAGGAACATGGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAATTTTGGAATTTTTGGAGTTCCTATGGTTGGTTCAGATATATGTGGATTCTTTCCTCCAACACCAGAAGAACTCTGCAACCGTTGGATTGAAGTTGGTGCGTTTTACCCCTTTTCAAGAGATCACGCTGATTACTACGCTCCAAGAAAAGAGCTTTACCAATGGGGAACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGATGAGATACAAACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGAGTGGTGCACCAATCGCTAGACCGCTCTTCTTCTCTTTCCCTGAGTTCACTGAATGCTACGGTTTGAGCAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCGCCGGTTCTTGAACAAGGTAAAACCCAAGTTGAAGCACTGTTCCCACCAGGTTCTTGGTACCACATGTTTGACATGACTCAGGTCGTTGTTTCAAAGAACGGGAGGCTTTTCACCCTCCCCGCTCCGTTTAACGTTGTGAACGTGCATCTTTACCAGAACGCGATACTACCCATGCAACAAGTCGTCGCTTTCCCGGCGGGAGCATCAGAGGGATACGCCTCCGGGAAACTCTTTCTTGATGATGATGAGCTTCCGGAGATGAAACTTGGAAACGGGAAGTCAACGTACATTGACTTCTACGCATCGGTTGGAAATGAGAGTGTGAAGATATGGTCGCAAGTGAAAGAAGGTCAGTTTGCGTTGAGCCAAGGTTTGGTGATTGAGAAAGTGATTGTTTTGGGACTTAAAGGAACATGGAAAGTTTCTGAAATACTTCTTAATGGAAGTTCAATCTCCAATGAGACCAAGACGATTGAGGTAAGCTCCAAGGAGCAGATGTATGTGGTGGGTTCTGAAGATGAAGGAGAGAGTAAAAGCTTCATGGTTGAGCTTAAGGGCCTTGAGATGCTAGTGGGTAAGGACTTCAACATATCTTGGAAAATGGCTAGTACTAATGTACTATCAATGGCAGGAAATGAGGTTATCGCGCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010383 GO:0010410 GO:0010411 GO:0016052 GO:0016787 GO:0016798 GO:0030054 GO:0030312 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045493 GO:0046556 GO:0046686 GO:0048046 GO:0050896 GO:0055044 GO:0071554 GO:0071704 GO:0071944 GO:0080176 GO:0097599 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Gal_mutarotas_2 Glyco_hydro_31 NtCtMGAM_N

Protein Analysis

868

Amino Acids

97.45

Weight (kDa)

6.17

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	69 - 238	3.6e-11	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	282 - 610	2.9e-117	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd	PF21365	618 - 707	7e-19	Glycosyl hydrolase family 31 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68560 AT3G45940
fragaria_vesca	FvH4_4g27500
malus_domestica	MD13G1042700.v1.1 MD16G1043700.v1.1
prunus_persica	Prupe.1G309900_v2.0.a1 Prupe.2G051500_v2.0.a1 Prupe.2G076500_v2.0.a1
pyrus_communis	pycom13g03740 pycom16g03770
rosa_chinensis	RchiOBHm_Chr4g0435281 RchiOBHm_Chr4g0435321
rosa_laevigata	RLG00000006601
rosa_multiflora	Rmu_sc0000357.1_g000002 Rmu_sc0001940.1_g000004 Rmu_sc0002132.1_g000062
rosa_roxburghii	Rroxscaffold_5G00376570 Rroxscaffold_5G00376580
rosa_rugosa	Rorug04G0284200
rosa_samantha	Rh4AG339600 Rh4AG339800 Rh4BG348000 Rh4BG348300 Rh4CG362600 Rh4CG362900 Rh4DG342000 Rh4DG342100
rosa_wichuraiana	Rw4G029630 Rw4G029640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	603
Acc65I	GGTACC	2 cut(s)	894, 2010
AccB1I	GGYRCC	2 cut(s)	894, 2010
AccB7I	CCANNNNNTGG	2 cut(s)	1069, 2326
AccBSI	CCGCTC	2 cut(s)	1873, 2075
AccI	GTMKAC	1 cut(s)	1131
AccII	CGCG	6 cut(s)	225, 515, 1118, 2114, 2600, 2602
AccIII	TCCGGA	2 cut(s)	347, 2206
AciI	CCGC	4 cut(s)	280, 1871, 2073, 2150
AclI	AACGTT	2 cut(s)	666, 2085
AclWI	GGATC	7 cut(s)	219, 374, 402, 943, 1020, 1091, 1313
AcoI	YGGCCR	1 cut(s)	842
AcsI	RAATTY	4 cut(s)	1021, 1263, 1594, 1602
AcuI	CTGAAG	2 cut(s)	615, 2487
AcyI	GRCGYC	1 cut(s)	600
AfiI	CCNNNNNNNGG	8 cut(s)	116, 283, 1069, 1106, 1240, 1295, 1622, 2326
AflII	CTTAAG	1 cut(s)	2504
AflIII	ACRYGT	2 cut(s)	513, 2016
AhlI	ACTAGT	1 cut(s)	434
AjnI	CCWGG	3 cut(s)	1099, 1201, 1999
Alw21I	GWGCWC	1 cut(s)	1858
Alw26I	GTCTC	6 cut(s)	111, 413, 522, 607, 870, 2408
Alw44I	GTGCAC	1 cut(s)	1854
AlwI	GGATC	7 cut(s)	219, 374, 402, 943, 1020, 1091, 1313
Ama87I	CYCGRG	1 cut(s)	485
Aor13HI	TCCGGA	2 cut(s)	347, 2206
AoxI	GGCC	5 cut(s)	842, 1199, 1434, 1452, 2509
ApaLI	GTGCAC	1 cut(s)	1854
ApeKI	GCWGC	3 cut(s)	120, 1526, 1938
ApoI	RAATTY	4 cut(s)	1021, 1263, 1594, 1602
Asp700I	GAANNNNTTC	1 cut(s)	2385
Asp718I	GGTACC	2 cut(s)	894, 2010
AspLEI	GCGC	3 cut(s)	850, 2602, 2604
AspS9I	GGNCC	6 cut(s)	350, 475, 794, 1205, 1497, 2509
AsuC2I	CCSGG	3 cut(s)	284, 2147, 2176
AsuHPI	GGTGA	5 cut(s)	364, 545, 869, 2056, 2341
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	5 cut(s)	350, 475, 794, 1205, 1497
BaeGI	GKGCMC	1 cut(s)	1858
BanI	GGYRCC	2 cut(s)	894, 2010
BarI	GAAGNNNNNNTAC	4 cut(s)	2222, 2231, 2254, 2263
BbsI	GAAGAC	1 cut(s)	603
Bbv12I	GWGCWC	1 cut(s)	1858
BbvI	GCAGC	3 cut(s)	132, 1513, 1950
BccI	CCATC	9 cut(s)	77, 110, 188, 249, 457, 882, 983, 1063, 1289
BceAI	ACGGC	5 cut(s)	181, 380, 430, 841, 857
BciT130I	CCWGG	3 cut(s)	1101, 1203, 2001
BciVI	GTATCC	1 cut(s)	2159
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	3 cut(s)	284, 2147, 2176
BcoDI	GTCTC	6 cut(s)	111, 413, 522, 607, 870, 2408
BcuI	ACTAGT	1 cut(s)	434
BfaI	CTAG	7 cut(s)	435, 869, 1149, 1349, 1866, 2522, 2559
BfmI	CTRYAG	1 cut(s)	202
BfoI	RGCGCY	1 cut(s)	851
BfrI	CTTAAG	1 cut(s)	2504
BfuI	GTATCC	1 cut(s)	2159
BglII	AGATCT	1 cut(s)	489
BisI	GCNGC	3 cut(s)	121, 1527, 1939
BlpI	GCTNAGC	1 cut(s)	1035
BlsI	GCNGC	3 cut(s)	122, 1528, 1940
BmcAI	AGTACT	1 cut(s)	2563
Bme1390I	CCNGG	6 cut(s)	284, 1101, 1203, 2001, 2147, 2176
Bme18I	GGWCC	5 cut(s)	350, 475, 794, 1205, 1497
BmeT110I	CYCGRG	1 cut(s)	485
BmgT120I	GGNCC	6 cut(s)	350, 475, 794, 1205, 1497, 2509
BmiI	GGNNCC	3 cut(s)	567, 896, 2012
BmrFI	CCNGG	6 cut(s)	284, 1101, 1203, 2001, 2147, 2176
BmsI	GCATC	7 cut(s)	649, 964, 1425, 2107, 2165, 2264, 2508
BoxI	GACNNNNGTC	1 cut(s)	2033
BpiI	GAAGAC	1 cut(s)	603
BplI	GAGNNNNNCTC	2 cut(s)	2420, 2452
BpmI	CTGGAG	2 cut(s)	38, 1560
Bpu1102I	GCTNAGC	1 cut(s)	1035
BpuEI	CTTGAG	3 cut(s)	528, 1176, 2534
BpuMI	CCSGG	3 cut(s)	284, 2147, 2176
BsaBI	GATNNNNATC	1 cut(s)	365
BsaHI	GRCGYC	1 cut(s)	600
BsaI	GGTCTC	2 cut(s)	870, 2408
BsaJI	CCNNGG	5 cut(s)	96, 1468, 1549, 2320, 2439
BsaWI	WCCGGW	5 cut(s)	325, 347, 352, 643, 2206
BsaXI	ACNNNNNCTCC	4 cut(s)	450, 480, 2435, 2465
Bsc4I	CCNNNNNNNGG	8 cut(s)	116, 283, 1069, 1106, 1240, 1295, 1622, 2326
Bse118I	RCCGGY	1 cut(s)	1954
Bse1I	ACTGG	8 cut(s)	55, 478, 567, 866, 1208, 1336, 1538, 1543
Bse8I	GATNNNNATC	1 cut(s)	365
BseAI	TCCGGA	2 cut(s)	347, 2206
BseBI	CCWGG	3 cut(s)	1101, 1203, 2001
BseDI	CCNNGG	5 cut(s)	96, 1468, 1549, 2320, 2439
BseGI	GGATG	5 cut(s)	180, 640, 727, 994, 1800
BseJI	GATNNNNATC	1 cut(s)	365
BseLI	CCNNNNNNNGG	8 cut(s)	116, 283, 1069, 1106, 1240, 1295, 1622, 2326
BseMII	CTCAG	3 cut(s)	1422, 1881, 2045
BseNI	ACTGG	8 cut(s)	55, 478, 567, 866, 1208, 1336, 1538, 1543
BsePI	GCGCGC	1 cut(s)	2600
BseRI	GAGGAG	1 cut(s)	266
BseSI	GKGCMC	1 cut(s)	1858
BseXI	GCAGC	3 cut(s)	132, 1513, 1950
Bsh1236I	CGCG	6 cut(s)	225, 515, 1118, 2114, 2600, 2602
BshFI	GGCC	5 cut(s)	844, 1201, 1436, 1454, 2511
BshNI	GGYRCC	2 cut(s)	894, 2010
BsiHKAI	GWGCWC	1 cut(s)	1858
BsiHKCI	CYCGRG	1 cut(s)	485
BsiSI	CCGG	9 cut(s)	283, 326, 348, 353, 644, 1955, 2147, 2175, 2207
BslFI	GGGAC	1 cut(s)	2367
BslI	CCNNNNNNNGG	8 cut(s)	116, 283, 1069, 1106, 1240, 1295, 1622, 2326
BsmAI	GTCTC	6 cut(s)	111, 413, 522, 607, 870, 2408
BsmBI	CGTCTC	3 cut(s)	413, 522, 607
BsmFI	GGGAC	1 cut(s)	2367
BsmI	GAATGC	1 cut(s)	1907
BsnI	GGCC	5 cut(s)	844, 1201, 1436, 1454, 2511
Bso31I	GGTCTC	2 cut(s)	870, 2408
BsoBI	CYCGRG	1 cut(s)	485
Bsp1286I	GDGCHC	1 cut(s)	1858
Bsp13I	TCCGGA	2 cut(s)	347, 2206
Bsp1720I	GCTNAGC	1 cut(s)	1035
Bsp19I	CCATGG	1 cut(s)	96
BspACI	CCGC	4 cut(s)	280, 1871, 2073, 2150
BspANI	GGCC	5 cut(s)	844, 1201, 1436, 1454, 2511
BspCNI	CTCAG	3 cut(s)	1423, 1882, 2044
BspEI	TCCGGA	2 cut(s)	347, 2206
BspFNI	CGCG	6 cut(s)	225, 515, 1118, 2114, 2600, 2602
BspLI	GGNNCC	3 cut(s)	567, 896, 2012
BspPI	GGATC	7 cut(s)	219, 374, 402, 943, 1020, 1091, 1313
BspQI	GCTCTTC	1 cut(s)	1880
BspT107I	GGYRCC	2 cut(s)	894, 2010
BspTI	CTTAAG	1 cut(s)	2504
BspTNI	GGTCTC	2 cut(s)	870, 2408
BsrBI	CCGCTC	2 cut(s)	1873, 2075
BsrFI	RCCGGY	1 cut(s)	1954
BsrI	ACTGG	8 cut(s)	55, 478, 567, 866, 1208, 1336, 1538, 1543
BssAI	RCCGGY	1 cut(s)	1954
BssECI	CCNNGG	5 cut(s)	96, 1468, 1549, 2320, 2439
BssHII	GCGCGC	1 cut(s)	2600
BssNAI	GTATAC	1 cut(s)	1132
BssNI	GRCGYC	1 cut(s)	600
BssT1I	CCWWGG	5 cut(s)	96, 1468, 1549, 2320, 2439
Bst1107I	GTATAC	1 cut(s)	1132
Bst2UI	CCWGG	3 cut(s)	1101, 1203, 2001
Bst6I	CTCTTC	4 cut(s)	24, 197, 593, 1880
BstACI	GRCGYC	1 cut(s)	600
BstAFI	CTTAAG	1 cut(s)	2504
BstAPI	GCANNNNNTGC	1 cut(s)	1567
BstC8I	GCNNGC	4 cut(s)	846, 1461, 1568, 2602
BstDEI	CTNAG	5 cut(s)	945, 1035, 1431, 1890, 2031
BstDSI	CCRYGG	1 cut(s)	96
BstF5I	GGATG	5 cut(s)	180, 640, 727, 994, 1800
BstFNI	CGCG	6 cut(s)	225, 515, 1118, 2114, 2600, 2602
BstH2I	RGCGCY	1 cut(s)	851
BstHHI	GCGC	3 cut(s)	850, 2602, 2604
BstMAI	GTCTC	6 cut(s)	111, 413, 522, 607, 870, 2408
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 1460, 1567, 1775, 1784, 1862, 2147
BstNI	CCWGG	3 cut(s)	1101, 1203, 2001
BstNSI	RCATGY	1 cut(s)	2020
BstPAI	GACNNNNGTC	1 cut(s)	2033
BstSCI	CCNGG	6 cut(s)	282, 1099, 1201, 1999, 2145, 2174
BstSFI	CTRYAG	1 cut(s)	202
BstSLI	GKGCMC	1 cut(s)	1858
BstUI	CGCG	6 cut(s)	225, 515, 1118, 2114, 2600, 2602
BstV1I	GCAGC	3 cut(s)	132, 1513, 1950
BstV2I	GAAGAC	1 cut(s)	603
BstX2I	RGATCY	6 cut(s)	379, 407, 489, 948, 1012, 1096
BstXI	CCANNNNNNTGG	2 cut(s)	1850, 2007
BstYI	RGATCY	6 cut(s)	379, 407, 489, 948, 1012, 1096
BstZ17I	GTATAC	1 cut(s)	1132
BsuI	GTATCC	1 cut(s)	2159
BsuRI	GGCC	5 cut(s)	844, 1201, 1436, 1454, 2511
BtgI	CCRYGG	1 cut(s)	96
BtgZI	GCGATG	2 cut(s)	200, 1272
BtsCI	GGATG	5 cut(s)	180, 640, 727, 994, 1800
BtsIMutI	CAGTG	6 cut(s)	62, 591, 621, 1531, 1896, 1988
Cac8I	GCNNGC	4 cut(s)	846, 1461, 1568, 2602
CfoI	GCGC	3 cut(s)	850, 2602, 2604
Cfr10I	RCCGGY	1 cut(s)	1954
Cfr13I	GGNCC	6 cut(s)	350, 475, 794, 1205, 1497, 2509
CpoI	CGGWCCG	1 cut(s)	350
CseI	GACGC	4 cut(s)	248, 504, 521, 1415
CsiI	ACCWGGT	1 cut(s)	1999
CspCI	CAANNNNNGTGG	2 cut(s)	1489, 1524
CspI	CGGWCCG	1 cut(s)	350
DdeI	CTNAG	5 cut(s)	945, 1035, 1431, 1890, 2031
EaeI	YGGCCR	1 cut(s)	842
Eam1104I	CTCTTC	4 cut(s)	24, 197, 593, 1880
EarI	CTCTTC	4 cut(s)	24, 197, 593, 1880
EciI	GGCGGA	1 cut(s)	269
Eco130I	CCWWGG	5 cut(s)	96, 1468, 1549, 2320, 2439
Eco147I	AGGCCT	1 cut(s)	1454
Eco31I	GGTCTC	2 cut(s)	870, 2408
Eco32I	GATATC	1 cut(s)	1950
Eco47I	GGWCC	5 cut(s)	350, 475, 794, 1205, 1497
Eco57I	CTGAAG	2 cut(s)	615, 2487
Eco88I	CYCGRG	1 cut(s)	485
EcoO109I	RGGNCCY	1 cut(s)	2509
EcoRII	CCWGG	3 cut(s)	1099, 1201, 1999
EcoRV	GATATC	1 cut(s)	1950
EcoT14I	CCWWGG	5 cut(s)	96, 1468, 1549, 2320, 2439
ErhI	CCWWGG	5 cut(s)	96, 1468, 1549, 2320, 2439
Esp3I	CGTCTC	3 cut(s)	413, 522, 607
FalI	AAGNNNNNCTT	2 cut(s)	1169, 1201
FaqI	GGGAC	1 cut(s)	2367
FauI	CCCGC	2 cut(s)	2080, 2143
FauNDI	CATATG	1 cut(s)	1845
FbaI	TGATCA	1 cut(s)	817
FblI	GTMKAC	1 cut(s)	1131
Fnu4HI	GCNGC	3 cut(s)	121, 1527, 1939
FokI	GGATG	5 cut(s)	167, 627, 734, 1001, 1807
Fsp4HI	GCNGC	3 cut(s)	121, 1527, 1939
FspBI	CTAG	7 cut(s)	435, 869, 1149, 1349, 1866, 2522, 2559
GlaI	GCGC	3 cut(s)	849, 2601, 2603
GluI	GCNGC	3 cut(s)	121, 1527, 1939
GsuI	CTGGAG	2 cut(s)	38, 1560
HaeII	RGCGCY	1 cut(s)	851
HaeIII	GGCC	5 cut(s)	844, 1201, 1436, 1454, 2511
HapII	CCGG	9 cut(s)	283, 326, 348, 353, 644, 1955, 2147, 2175, 2207
HgaI	GACGC	4 cut(s)	248, 504, 521, 1415
HhaI	GCGC	3 cut(s)	850, 2602, 2604
Hin1I	GRCGYC	1 cut(s)	600
Hin6I	GCGC	3 cut(s)	848, 2600, 2602
HinP1I	GCGC	3 cut(s)	848, 2600, 2602
HincII	GTYRAC	2 cut(s)	1114, 2235
HindII	GTYRAC	2 cut(s)	1114, 2235
HindIII	AAGCTT	2 cut(s)	1341, 2488
HinfI	GANTC	8 cut(s)	189, 449, 555, 740, 1059, 1641, 1772, 2029
HpaII	CCGG	9 cut(s)	283, 326, 348, 353, 644, 1955, 2147, 2175, 2207
HphI	GGTGA	5 cut(s)	364, 545, 869, 2056, 2341
Hpy99I	CGWCG	4 cut(s)	802, 1272, 1409, 2141
HpyAV	CCTTC	6 cut(s)	194, 230, 1166, 1820, 2294, 2468
HpyCH4IV	ACGT	8 cut(s)	600, 666, 749, 1270, 1477, 2085, 2094, 2237
HpyCH4V	TGCA	6 cut(s)	686, 1570, 1671, 1856, 2098, 2128
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 1460, 1567, 1775, 1784, 1862, 2147
HpyF3I	CTNAG	5 cut(s)	945, 1035, 1431, 1890, 2031
HpySE526I	ACGT	8 cut(s)	600, 666, 749, 1270, 1477, 2085, 2094, 2237
Hsp92I	GRCGYC	1 cut(s)	600
HspAI	GCGC	3 cut(s)	848, 2600, 2602
Kpn2I	TCCGGA	2 cut(s)	347, 2206
KpnI	GGTACC	2 cut(s)	898, 2014
Ksp22I	TGATCA	1 cut(s)	817
LguI	GCTCTTC	1 cut(s)	1880
LmnI	GCTCC	7 cut(s)	355, 446, 1738, 2080, 2153, 2441, 2443
Lsp1109I	GCAGC	3 cut(s)	132, 1513, 1950
LweI	GCATC	7 cut(s)	649, 964, 1425, 2107, 2165, 2264, 2508
MabI	ACCWGGT	1 cut(s)	1999
MaeI	CTAG	7 cut(s)	435, 869, 1149, 1349, 1866, 2522, 2559
MaeII	ACGT	8 cut(s)	600, 666, 749, 1270, 1477, 2085, 2094, 2237
MaeIII	GTNAC	6 cut(s)	152, 328, 992, 1121, 1491, 1781
MbiI	CCGCTC	2 cut(s)	1873, 2075
MflI	RGATCY	6 cut(s)	379, 407, 489, 948, 1012, 1096
MhlI	GDGCHC	1 cut(s)	1858
MluCI	AATT	6 cut(s)	759, 931, 1021, 1263, 1594, 1602
MluI	ACGCGT	1 cut(s)	513
MlyI	GAGTC	4 cut(s)	183, 458, 1781, 2023
MmeI	TCCRAC	5 cut(s)	87, 435, 1658, 1676, 2242
MroI	TCCGGA	2 cut(s)	347, 2206
MroXI	GAANNNNTTC	1 cut(s)	2385
MslI	CAYNNNNRTG	2 cut(s)	1386, 1848
MspCI	CTTAAG	1 cut(s)	2504
MspI	CCGG	9 cut(s)	283, 326, 348, 353, 644, 1955, 2147, 2175, 2207
MspR9I	CCNGG	6 cut(s)	284, 1101, 1203, 2001, 2147, 2176
Mva1269I	GAATGC	1 cut(s)	1907
MvaI	CCWGG	3 cut(s)	1101, 1203, 2001
MvnI	CGCG	6 cut(s)	225, 515, 1118, 2114, 2600, 2602
MwoI	GCNNNNNNNGC	7 cut(s)	129, 1460, 1567, 1775, 1784, 1862, 2147
NciI	CCSGG	3 cut(s)	284, 2147, 2176
NcoI	CCATGG	1 cut(s)	96
NdeI	CATATG	1 cut(s)	1845
NlaIV	GGNNCC	3 cut(s)	567, 896, 2012
NmeAIII	GCCGAG	1 cut(s)	584
NmuCI	GTSAC	1 cut(s)	1491
NspI	RCATGY	1 cut(s)	2020
PaeR7I	CTCGAG	1 cut(s)	485
PauI	GCGCGC	1 cut(s)	2600
PceI	AGGCCT	1 cut(s)	1454
PciI	ACATGT	1 cut(s)	2016
PciSI	GCTCTTC	1 cut(s)	1880
PcsI	WCGNNNNNNNCGW	1 cut(s)	2091
PctI	GAATGC	1 cut(s)	1907
PdmI	GAANNNNTTC	1 cut(s)	2385
PfeI	GAWTC	4 cut(s)	555, 740, 1059, 1641
PflMI	CCANNNNNTGG	2 cut(s)	1069, 2326
PfoI	TCCNGGA	1 cut(s)	2174
PkrI	GCNGC	3 cut(s)	122, 1528, 1940
PleI	GAGTC	4 cut(s)	183, 457, 1780, 2023
PpsI	GAGTC	4 cut(s)	183, 457, 1780, 2023
PscI	ACATGT	1 cut(s)	2016
PshAI	GACNNNNGTC	1 cut(s)	2033
Psp1406I	AACGTT	2 cut(s)	666, 2085
Psp6I	CCWGG	3 cut(s)	1099, 1201, 1999
PspGI	CCWGG	3 cut(s)	1099, 1201, 1999
PspN4I	GGNNCC	3 cut(s)	567, 896, 2012
PspPI	GGNCC	6 cut(s)	350, 475, 794, 1205, 1497, 2509
PsuI	RGATCY	6 cut(s)	379, 407, 489, 948, 1012, 1096
PteI	GCGCGC	1 cut(s)	2600
RseI	CAYNNNNRTG	2 cut(s)	1386, 1848
Rsr2I	CGGWCCG	1 cut(s)	350
RsrII	CGGWCCG	1 cut(s)	350
SapI	GCTCTTC	1 cut(s)	1880
SatI	GCNGC	3 cut(s)	121, 1527, 1939
Sau96I	GGNCC	6 cut(s)	350, 475, 794, 1205, 1497, 2509
ScaI	AGTACT	1 cut(s)	2563
SchI	GAGTC	4 cut(s)	183, 458, 1781, 2023
ScrFI	CCNGG	6 cut(s)	284, 1101, 1203, 2001, 2147, 2176
SduI	GDGCHC	1 cut(s)	1858
SexAI	ACCWGGT	1 cut(s)	1999
SfaNI	GCATC	7 cut(s)	649, 964, 1425, 2107, 2165, 2264, 2508
SfcI	CTRYAG	1 cut(s)	202
Sfr274I	CTCGAG	1 cut(s)	485
SinI	GGWCC	5 cut(s)	350, 475, 794, 1205, 1497
SlaI	CTCGAG	1 cut(s)	485
SmiMI	CAYNNNNRTG	2 cut(s)	1386, 1848
SmlI	CTYRAG	5 cut(s)	485, 543, 1191, 2504, 2513
SmoI	CTYRAG	5 cut(s)	485, 543, 1191, 2504, 2513
SpeI	ACTAGT	1 cut(s)	434
Sse9I	AATT	6 cut(s)	759, 931, 1021, 1263, 1594, 1602
SseBI	AGGCCT	1 cut(s)	1454
SsiI	CCGC	4 cut(s)	280, 1871, 2073, 2150
SspMI	CTAG	7 cut(s)	435, 869, 1149, 1349, 1866, 2522, 2559
StuI	AGGCCT	1 cut(s)	1454
StyD4I	CCNGG	6 cut(s)	282, 1099, 1201, 1999, 2145, 2174
StyI	CCWWGG	5 cut(s)	96, 1468, 1549, 2320, 2439
TaiI	ACGT	8 cut(s)	603, 669, 752, 1273, 1480, 2088, 2097, 2240
TaqI	TCGA	4 cut(s)	187, 486, 1267, 1308
TasI	AATT	6 cut(s)	759, 931, 1021, 1263, 1594, 1602
TatI	WGTACW	2 cut(s)	2561, 2569
TfiI	GAWTC	4 cut(s)	555, 740, 1059, 1641
TscAI	CASTG	6 cut(s)	62, 598, 628, 1538, 1903, 1995
TseFI	GTSAC	1 cut(s)	1491
TseI	GCWGC	3 cut(s)	120, 1526, 1938
Tsp45I	GTSAC	1 cut(s)	1491
TspGWI	ACGGA	4 cut(s)	224, 255, 540, 2067
TspRI	CASTG	6 cut(s)	62, 598, 628, 1538, 1903, 1995
Van91I	CCANNNNNTGG	2 cut(s)	1069, 2326
Vha464I	CTTAAG	1 cut(s)	2504
VneI	GTGCAC	1 cut(s)	1854
VpaK11BI	GGWCC	5 cut(s)	350, 475, 794, 1205, 1497
XapI	RAATTY	4 cut(s)	1021, 1263, 1594, 1602
XceI	RCATGY	1 cut(s)	2020
XcmI	CCANNNNNNNNNTGG	2 cut(s)	858, 2004
XhoI	CTCGAG	1 cut(s)	485
XmiI	GTMKAC	1 cut(s)	1131
XmnI	GAANNNNTTC	1 cut(s)	2385
XspI	CTAG	7 cut(s)	435, 869, 1149, 1349, 1866, 2522, 2559
ZraI	GACGTC	1 cut(s)	601
ZrmI	AGTACT	1 cut(s)	2563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.