Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0005422

Physical Location & Seq

Genomic Coordinates Reverse (-)

28476834 .. 28482715

Gene Structure 5882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g27500.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGTGGTCTTCCACCACCACACTATGCCTCTCCTCTCTCCTTATCCTAGTCTTATCTCTCTCTTTCTCCGGTGCATACTCTTACACCAACCCCAAGATCATCGGCAAAGGCTACCGTCTCATCTCCGTTGAAGAAACCCCCGACGGCGGGATTCTCGGCCTCCTCCAGCTCAAATACAAGTCCAAAACTTTCGGACCCGACATCCCTCTCTTACAGCTCTTTGTCAAGCACGAGACAGATCAACGGCTGAGAGTCCACATTACCGATGCTCAGAAGCAGCGGTGGGAGGTACCCTACAACCTCCTACCCAGAGAGCAGCCTCCGTCGCTGAAGCAGAGCATTGGGAAAGCCAAGGACCCTATAACAGTTTCCGAGTATTCAAGCTCGGAGCTCATCTTCAGCTACACCGCAGACCCGTTTGGGTTTGTGGTGAAGCGAAAAATGGATAAGCAAGTACTTTTCGACACCAGCTCTGATGCTTCAGGCCCTTATGGAGAGATGGTGTTTAAAGACCAGTACCTTGAGATCTCTACAAAGCTTCCTAAAGATGCATCCCTTTATGGGTTGGGAGAGAACTCCCAGCCCCATGGGATCAAGCTCTACCCAAATGACCCTTATACCCTCTACACCACTGATACCTCTGCTATCAACCTCAACACTGACTTGTATGGCTCCCACCCAGTTTACATGGATCTGAGGAATGTGGGTGGTGAGGCTTTTGCTCATGCTGTTCTGTTGCTCAACAGTAATGGGATGGATTTGTTTTACAGAGGTGATTCTTTGACGTATAAGGTTATTGGGGGTGTGTTTGATTTCTACTTCTTTTCCGGGACTAGTCCACTAGCTGTGGTTGACCAGTACACTTCTTTCATTGGAAGACCGGCTCCAATGCCTTACTGGTCTCTAGGATTCCACCAATGCAGATGGGGTTATCACAACTTATCTGTGGTTGAAGATGTTGTTGAGAATTATAAAAAGGCTCAAATTCCTCTAGATGTCATGTGGACTGATGATGATCACATGGACGTGCGCAAAGACTTCACTCTCAGCCCCACAAACTTTCCCCGGCCAAAGCTTCTGGCATTCCTAGATAAAATTCATAAGATTGGCATGAAGTACGTTGTCATTGTTGATCCTGGAATTGGTATTAATAGTTCGTATGGTGTGTACACAAGAGGTCTTGCTAATGATGTTTTCATCAAGTATGATAATGAACCTTACTTGGCTCAGGTTTGGCCAGGGGCTGTACACTTCCCTGACTTCCTCAACCCAAAAACTGTTTCATGGTGGGCTGATGAGGTCAAGCGCTTTCATGAACTTGTCCCTGTTGATGGGTTATGGATTGACATGAATGAGGCTTCAAATTTCTGTTCTGGGAAATGCACAATTCCAAAGGGGGTACAGTGCCCTAAACCGGGTATACCTGGCTGGATATGTTGCTTGGATTGCAAGAACATCACAAATACGAGATGGGATGATCCACCTTACAAGATAAATGCTTCAGGGACGCAAGTTCCCTTGGGTTTCAAAACCATTGCCACTAGTGCATATCATTACAATGGCGTTTTGGAGTACGATGCTCACAGTCTTTATGGTTTTACGCAATCCATTGCAACTCATCAAGGTCTTCAAGGAATTGCAGGCAAGCGGCCATTTATATTATCCCGCTCCACTTATGTTGGTTCAGGCAAGTATACTGCACATTGGACAGGTGATAATAAGGGAACTTGGGAGGATTTGAAAATCTCAATCTCTACTGTCCTCAATTTTGGAATATTTGGGGTGCCGATGGTTGGCTCAGATATATGTGGGTTCTATCCAGCACCTACTGAAGAGCTTTGCAATCGTTGGATTGAAGTGGGTGCTTTCTACCCGTTTTCAAGGGATCATGCAAACTTCGCTTCCCCAAGGCAAGAGCTTTATCAGTGGGAGTCGGTAGCTATCTCTGGTCGAAATGCACTAGGTATGAGGTATAAGCTCCTTCCTTATCTGTACACTTTGACCTACGAAGCTCATATCAGTGGAGCTCCAATTGCAAGGCCACTGTTTTTCTCATTCCCAACATATACTGAATGCTATGGGTTGAGTACTCAATTCTTGCTAGGAAGCGGGCTTATGATCTCTCCAGTTCTTGAGGAAGGAAAAACCGAGGTCAAAGCATTGTTCCCCCCTGGAAGCTGGTACAGTTTATTTGATATGACACAGGCTGTTAATTCAAAGGGACAGTATGTTACACTTGATGCGCCGTTGCATGTAGTTAATGTGCATTTGTATCAGAACAACATTCTACCAATGCAGCAGGGTGGAATGGTATCTAAAGATGCGAGAATGACTCCTTTTAGCCTCGTAGTAACCTTCCCAGCTGGGGCAAGCAATGCGACAGCAAAGGGAAACATTTTCATCGATGACGATGAGCTTCCAGATATGACACTGGGAAATGGCTACTCCACATATGTCGATCTCTATGCAACCCTAAGTCAAGGATCTGTGAAGGTGTGGTCAGAAGTTCAGGAGGGTAAATTTGCTCTAGAACAAGGTTTGATTATTGAGAAGGTGAGTGTGCTGGGACTGGATGGAAGCGGAGGAGCATCAGCTCTCGAGGTTGATGGAACTACAGTGACAAGTGTTTCAAAGATAGAGCTGAGCACACTGGAGCAGGAGTACCAAGAGGAGGTGGAAGATGGAGAGAGCAAGACCAAGAGTGTAATGGTTCAGGTCAATGGTTTGTCACTCCCTGTGGGTAAAAACTTCGCCATGTCCTGGAAAATGGGCGTCCAAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010383 GO:0010410 GO:0010411 GO:0016052 GO:0016787 GO:0016798 GO:0030054 GO:0030312 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045493 GO:0046556 GO:0046686 GO:0048046 GO:0050896 GO:0055044 GO:0071554 GO:0071704 GO:0071944 GO:0080176 GO:0097599 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Gal_mutarotas_2 Glyco_hydro_31 NtCtMGAM_N

Protein Analysis

928

Amino Acids

103.01

Weight (kDa)

5.53

Isoelectric Point (pI)

33.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	82 - 249	2.4e-10	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	294 - 667	1.8e-118	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd	PF21365	675 - 763	1.3e-19	Glycosyl hydrolase family 31 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68560 AT3G45940
fragaria_vesca	FvH4_4g27500
malus_domestica	MD13G1042700.v1.1 MD16G1043700.v1.1
prunus_persica	Prupe.1G309900_v2.0.a1 Prupe.2G051500_v2.0.a1 Prupe.2G076500_v2.0.a1
pyrus_communis	pycom13g03740 pycom16g03770
rosa_chinensis	RchiOBHm_Chr4g0435281 RchiOBHm_Chr4g0435321
rosa_laevigata	RLG00000006601
rosa_multiflora	Rmu_sc0000357.1_g000002 Rmu_sc0001940.1_g000004 Rmu_sc0002132.1_g000062
rosa_roxburghii	Rroxscaffold_5G00376570 Rroxscaffold_5G00376580
rosa_rugosa	Rorug04G0284200
rosa_samantha	Rh4AG339600 Rh4AG339800 Rh4BG348000 Rh4BG348300 Rh4CG362600 Rh4CG362900 Rh4DG342000 Rh4DG342100
rosa_wichuraiana	Rw4G029630 Rw4G029640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	972
Acc16I	TGCGCA	1 cut(s)	1031
Acc65I	GGTACC	1 cut(s)	289
AccB1I	GGYRCC	2 cut(s)	289, 1783
AccB7I	CCANNNNNTGG	1 cut(s)	2760
AccBSI	CCGCTC	1 cut(s)	1668
AccI	GTMKAC	2 cut(s)	1420, 1694
AciI	CCGC	7 cut(s)	147, 280, 408, 1648, 1666, 2109, 2580
AclWI	GGATC	6 cut(s)	599, 699, 1127, 1472, 1893, 2491
AcoI	YGGCCR	3 cut(s)	1067, 1235, 1649
AcsI	RAATTY	4 cut(s)	984, 1095, 1363, 2519
AcuI	CTGAAG	5 cut(s)	350, 382, 465, 1485, 1851
AcyI	GRCGYC	1 cut(s)	2772
AfeI	AGCGCT	1 cut(s)	1307
AhlI	ACTAGT	2 cut(s)	833, 1541
AjiI	CACGTC	1 cut(s)	1027
AjnI	CCWGG	5 cut(s)	1135, 1237, 1423, 2170, 2759
AjuI	GAANNNNNNNTTGG	2 cut(s)	1264, 1296
Alw21I	GWGCWC	3 cut(s)	393, 2029, 2648
Alw26I	GTCTC	3 cut(s)	122, 227, 906
AlwI	GGATC	6 cut(s)	599, 699, 1127, 1472, 1893, 2491
AlwNI	CAGNNNCTG	1 cut(s)	1244
Ama87I	CYCGRG	1 cut(s)	2597
Aor51HI	AGCGCT	1 cut(s)	1307
AoxI	GGCC	6 cut(s)	157, 484, 1067, 1235, 1649, 2039
ApeKI	GCWGC	3 cut(s)	277, 316, 2296
ApoI	RAATTY	4 cut(s)	984, 1095, 1363, 2519
AseI	ATTAAT	1 cut(s)	1149
Asp718I	GGTACC	1 cut(s)	289
AspLEI	GCGC	3 cut(s)	1032, 1308, 2245
AspS9I	GGNCC	3 cut(s)	194, 355, 485
AsuC2I	CCSGG	3 cut(s)	829, 1066, 1416
AsuHPI	GGTGA	5 cut(s)	442, 722, 785, 1724, 2566
AvaI	CYCGRG	1 cut(s)	2597
AvaII	GGWCC	2 cut(s)	194, 355
BaeGI	GKGCMC	1 cut(s)	1409
BalI	TGGCCA	1 cut(s)	1237
BanI	GGYRCC	2 cut(s)	289, 1783
BanII	GRGCYC	2 cut(s)	393, 2029
BauI	CACGAG	1 cut(s)	230
BbsI	GAAGAC	2 cut(s)	883, 1619
Bbv12I	GWGCWC	3 cut(s)	393, 2029, 2648
BbvI	GCAGC	3 cut(s)	289, 328, 2308
BccI	CCATC	9 cut(s)	493, 748, 918, 1325, 1464, 1783, 2567, 2600, 2675
BceAI	ACGGC	3 cut(s)	160, 260, 2230
BcgI	CGANNNNNNTGC	2 cut(s)	2447, 2481
BciT130I	CCWGG	5 cut(s)	1137, 1239, 1425, 2172, 2761
BclI	TGATCA	1 cut(s)	1015
BcnI	CCSGG	3 cut(s)	829, 1066, 1416
BcoDI	GTCTC	3 cut(s)	122, 227, 906
BcuI	ACTAGT	2 cut(s)	833, 1541
BfmI	CTRYAG	1 cut(s)	2613
BfoI	RGCGCY	1 cut(s)	1309
BglII	AGATCT	1 cut(s)	525
BisI	GCNGC	4 cut(s)	278, 317, 1649, 2297
BlpI	GCTNAGC	1 cut(s)	2642
BlsI	GCNGC	4 cut(s)	279, 318, 1650, 2298
BmcAI	AGTACT	2 cut(s)	456, 2089
Bme1390I	CCNGG	8 cut(s)	829, 1066, 1137, 1239, 1416, 1425, 2172, 2761
Bme18I	GGWCC	2 cut(s)	194, 355
BmeT110I	CYCGRG	1 cut(s)	2597
BmgBI	CACGTC	1 cut(s)	1027
BmgT120I	GGNCC	3 cut(s)	194, 355, 485
BmiI	GGNNCC	6 cut(s)	196, 291, 357, 673, 885, 1785
BmrFI	CCNGG	8 cut(s)	829, 1066, 1137, 1239, 1416, 1425, 2172, 2761
BmrI	ACTGGG	2 cut(s)	674, 2441
BmsI	GCATC	8 cut(s)	256, 466, 538, 560, 1567, 2230, 2311, 2597
BmuI	ACTGGG	2 cut(s)	674, 2441
BpiI	GAAGAC	2 cut(s)	883, 1619
BplI	GAGNNNNNCTC	2 cut(s)	2317, 2349
BpmI	CTGGAG	3 cut(s)	149, 2109, 2672
Bpu10I	CCTNAGC	1 cut(s)	1227
Bpu1102I	GCTNAGC	1 cut(s)	2642
BpuEI	CTTGAG	2 cut(s)	542, 2153
BpuMI	CCSGG	3 cut(s)	829, 1066, 1416
Bsa29I	ATCGAT	1 cut(s)	2403
BsaBI	GATNNNNATC	1 cut(s)	1014
BsaHI	GRCGYC	1 cut(s)	2772
BsaI	GGTCTC	1 cut(s)	906
BsaJI	CCNNGG	9 cut(s)	351, 586, 1064, 1238, 1518, 1907, 2148, 2170, 2776
BsaWI	WCCGGW	1 cut(s)	68
BsaXI	ACNNNNNCTCC	4 cut(s)	486, 516, 2645, 2675
Bse118I	RCCGGY	1 cut(s)	880
Bse1I	ACTGG	8 cut(s)	514, 680, 856, 902, 2126, 2436, 2574, 2655
Bse3DI	GCAATG	3 cut(s)	1533, 1608, 2380
Bse8I	GATNNNNATC	1 cut(s)	1014
BseBI	CCWGG	5 cut(s)	1137, 1239, 1425, 2172, 2761
BseCI	ATCGAT	1 cut(s)	2403
BseDI	CCNNGG	9 cut(s)	351, 586, 1064, 1238, 1518, 1907, 2148, 2170, 2776
BseGI	GGATG	5 cut(s)	201, 551, 759, 1480, 2578
BseJI	GATNNNNATC	1 cut(s)	1014
BseMI	GCAATG	3 cut(s)	1533, 1608, 2380
BseMII	CTCAG	7 cut(s)	239, 284, 686, 1060, 1241, 1812, 2633
BseNI	ACTGG	8 cut(s)	514, 680, 856, 902, 2126, 2436, 2574, 2655
BseRI	GAGGAG	4 cut(s)	22, 152, 2598, 2684
BseSI	GKGCMC	1 cut(s)	1409
BseXI	GCAGC	3 cut(s)	289, 328, 2308
BseYI	CCCAGC	4 cut(s)	579, 2359, 2363, 2563
BsgI	GTGCAG	1 cut(s)	1683
BshFI	GGCC	6 cut(s)	159, 486, 1069, 1237, 1651, 2041
BshNI	GGYRCC	2 cut(s)	289, 1783
BshVI	ATCGAT	1 cut(s)	2403
BsiHKAI	GWGCWC	3 cut(s)	393, 2029, 2648
BsiHKCI	CYCGRG	1 cut(s)	2597
BsiSI	CCGG	5 cut(s)	69, 828, 881, 1066, 1415
BslFI	GGGAC	5 cut(s)	844, 1307, 1519, 2235, 2580
BsmAI	GTCTC	3 cut(s)	122, 227, 906
BsmBI	CGTCTC	1 cut(s)	122
BsmFI	GGGAC	5 cut(s)	844, 1307, 1519, 2235, 2580
BsmI	GAATGC	2 cut(s)	1082, 2078
BsnI	GGCC	6 cut(s)	159, 486, 1069, 1237, 1651, 2041
Bso31I	GGTCTC	1 cut(s)	906
BsoBI	CYCGRG	1 cut(s)	2597
Bsp1286I	GDGCHC	4 cut(s)	393, 1409, 2029, 2648
Bsp1407I	TGTACA	3 cut(s)	1167, 1246, 1992
Bsp1720I	GCTNAGC	1 cut(s)	2642
Bsp19I	CCATGG	1 cut(s)	586
BspACI	CCGC	7 cut(s)	147, 280, 408, 1648, 1666, 2109, 2580
BspANI	GGCC	6 cut(s)	159, 486, 1069, 1237, 1651, 2041
BspCNI	CTCAG	7 cut(s)	240, 283, 687, 1059, 1240, 1811, 2634
BspDI	ATCGAT	1 cut(s)	2403
BspHI	TCATGA	1 cut(s)	1312
BspLI	GGNNCC	6 cut(s)	196, 291, 357, 673, 885, 1785
BspPI	GGATC	6 cut(s)	599, 699, 1127, 1472, 1893, 2491
BspQI	GCTCTTC	1 cut(s)	1827
BspT107I	GGYRCC	2 cut(s)	289, 1783
BspTNI	GGTCTC	1 cut(s)	906
BsrBI	CCGCTC	1 cut(s)	1668
BsrDI	GCAATG	3 cut(s)	1533, 1608, 2380
BsrFI	RCCGGY	1 cut(s)	880
BsrGI	TGTACA	3 cut(s)	1167, 1246, 1992
BsrI	ACTGG	8 cut(s)	514, 680, 856, 902, 2126, 2436, 2574, 2655
BssAI	RCCGGY	1 cut(s)	880
BssECI	CCNNGG	9 cut(s)	351, 586, 1064, 1238, 1518, 1907, 2148, 2170, 2776
BssNAI	GTATAC	2 cut(s)	1421, 1695
BssNI	GRCGYC	1 cut(s)	2772
BssSI	CACGAG	1 cut(s)	230
BssT1I	CCWWGG	5 cut(s)	351, 586, 1518, 1907, 2776
Bst1107I	GTATAC	2 cut(s)	1421, 1695
Bst2BI	CACGAG	1 cut(s)	230
Bst2UI	CCWGG	5 cut(s)	1137, 1239, 1425, 2172, 2761
Bst6I	CTCTTC	1 cut(s)	1827
BstACI	GRCGYC	1 cut(s)	2772
BstAPI	GCANNNNNTGC	1 cut(s)	2375
BstAUI	TGTACA	3 cut(s)	1167, 1246, 1992
BstC8I	GCNNGC	4 cut(s)	1642, 1646, 2111, 2371
BstDEI	CTNAG	8 cut(s)	248, 270, 695, 1046, 1227, 1798, 2474, 2642
BstDSI	CCRYGG	1 cut(s)	586
BstF5I	GGATG	5 cut(s)	201, 551, 759, 1480, 2578
BstH2I	RGCGCY	1 cut(s)	1309
BstHHI	GCGC	3 cut(s)	1032, 1308, 2245
BstMAI	GTCTC	3 cut(s)	122, 227, 906
BstMWI	GCNNNNNNNGC	6 cut(s)	325, 1446, 1544, 1898, 2033, 2375
BstNI	CCWGG	5 cut(s)	1137, 1239, 1425, 2172, 2761
BstNSI	RCATGY	1 cut(s)	2255
BstSCI	CCNGG	8 cut(s)	827, 1064, 1135, 1237, 1414, 1423, 2170, 2759
BstSFI	CTRYAG	1 cut(s)	2613
BstSLI	GKGCMC	1 cut(s)	1409
BstV1I	GCAGC	3 cut(s)	289, 328, 2308
BstV2I	GAAGAC	2 cut(s)	883, 1619
BstX2I	RGATCY	3 cut(s)	525, 691, 2483
BstXI	CCANNNNNNTGG	1 cut(s)	587
BstYI	RGATCY	3 cut(s)	525, 691, 2483
BstZ17I	GTATAC	2 cut(s)	1421, 1695
Bsu15I	ATCGAT	1 cut(s)	2403
BsuRI	GGCC	6 cut(s)	159, 486, 1069, 1237, 1651, 2041
BsuTUI	ATCGAT	1 cut(s)	2403
BtgI	CCRYGG	1 cut(s)	586
BtrI	CACGTC	1 cut(s)	1027
BtsCI	GGATG	5 cut(s)	201, 551, 759, 1480, 2578
BtsIMutI	CAGTG	9 cut(s)	630, 657, 1409, 1931, 2026, 2042, 2429, 2622, 2648
Cac8I	GCNNGC	4 cut(s)	1642, 1646, 2111, 2371
CaiI	CAGNNNCTG	1 cut(s)	1244
CciI	TCATGA	1 cut(s)	1312
CfoI	GCGC	3 cut(s)	1032, 1308, 2245
Cfr10I	RCCGGY	1 cut(s)	880
Cfr13I	GGNCC	3 cut(s)	194, 355, 485
ClaI	ATCGAT	1 cut(s)	2403
CseI	GACGC	2 cut(s)	1516, 2761
CspCI	CAANNNNNGTGG	2 cut(s)	1660, 1695
DdeI	CTNAG	8 cut(s)	248, 270, 695, 1046, 1227, 1798, 2474, 2642
DraI	TTTAAA	1 cut(s)	508
EaeI	YGGCCR	3 cut(s)	1067, 1235, 1649
Eam1104I	CTCTTC	1 cut(s)	1827
EarI	CTCTTC	1 cut(s)	1827
Ecl136II	GAGCTC	2 cut(s)	391, 2027
Eco130I	CCWWGG	5 cut(s)	351, 586, 1518, 1907, 2776
Eco24I	GRGCYC	2 cut(s)	393, 2029
Eco31I	GGTCTC	1 cut(s)	906
Eco47I	GGWCC	2 cut(s)	194, 355
Eco47III	AGCGCT	1 cut(s)	1307
Eco53kI	GAGCTC	2 cut(s)	391, 2027
Eco57I	CTGAAG	5 cut(s)	350, 382, 465, 1485, 1851
Eco88I	CYCGRG	1 cut(s)	2597
EcoICRI	GAGCTC	2 cut(s)	391, 2027
EcoO109I	RGGNCCY	2 cut(s)	355, 485
EcoRII	CCWGG	5 cut(s)	1135, 1237, 1423, 2170, 2759
EcoT14I	CCWWGG	5 cut(s)	351, 586, 1518, 1907, 2776
EcoT22I	ATGCAT	1 cut(s)	553
EcoT38I	GRGCYC	2 cut(s)	393, 2029
ErhI	CCWWGG	5 cut(s)	351, 586, 1518, 1907, 2776
Esp3I	CGTCTC	1 cut(s)	122
FaqI	GGGAC	5 cut(s)	844, 1307, 1519, 2235, 2580
FauI	CCCGC	3 cut(s)	140, 1673, 2102
FauNDI	CATATG	1 cut(s)	2452
FbaI	TGATCA	1 cut(s)	1015
FblI	GTMKAC	2 cut(s)	1420, 1694
Fnu4HI	GCNGC	4 cut(s)	278, 317, 1649, 2297
FokI	GGATG	5 cut(s)	188, 538, 766, 1487, 2585
FriOI	GRGCYC	2 cut(s)	393, 2029
Fsp4HI	GCNGC	4 cut(s)	278, 317, 1649, 2297
FspI	TGCGCA	1 cut(s)	1031
GlaI	GCGC	3 cut(s)	1031, 1307, 2244
GluI	GCNGC	4 cut(s)	278, 317, 1649, 2297
GsaI	CCCAGC	4 cut(s)	583, 2363, 2367, 2567
GsuI	CTGGAG	3 cut(s)	149, 2109, 2672
HaeII	RGCGCY	1 cut(s)	1309
HaeIII	GGCC	6 cut(s)	159, 486, 1069, 1237, 1651, 2041
HapII	CCGG	5 cut(s)	69, 828, 881, 1066, 1415
HgaI	GACGC	2 cut(s)	1516, 2761
HhaI	GCGC	3 cut(s)	1032, 1308, 2245
Hin1I	GRCGYC	1 cut(s)	2772
Hin6I	GCGC	3 cut(s)	1030, 1306, 2243
HinP1I	GCGC	3 cut(s)	1030, 1306, 2243
HincII	GTYRAC	1 cut(s)	853
HindII	GTYRAC	1 cut(s)	853
HindIII	AAGCTT	2 cut(s)	536, 1073
HinfI	GANTC	6 cut(s)	151, 252, 776, 909, 1931, 2332
HpaII	CCGG	5 cut(s)	69, 828, 881, 1066, 1415
HphI	GGTGA	5 cut(s)	442, 722, 785, 1724, 2566
Hpy188I	TCNGA	9 cut(s)	194, 273, 373, 388, 475, 696, 1801, 2277, 2503
Hpy188III	TCNNGA	7 cut(s)	992, 1313, 2132, 2420, 2510, 2528, 2597
Hpy99I	CGWCG	2 cut(s)	146, 328
HpyAV	CCTTC	5 cut(s)	1991, 2132, 2365, 2485, 2545
HpyCH4IV	ACGT	3 cut(s)	785, 1026, 1119
HpyF10VI	GCNNNNNNNGC	6 cut(s)	325, 1446, 1544, 1898, 2033, 2375
HpyF3I	CTNAG	8 cut(s)	248, 270, 695, 1046, 1227, 1798, 2474, 2642
HpySE526I	ACGT	3 cut(s)	785, 1026, 1119
Hsp92I	GRCGYC	1 cut(s)	2772
HspAI	GCGC	3 cut(s)	1030, 1306, 2243
KpnI	GGTACC	1 cut(s)	293
Ksp22I	TGATCA	1 cut(s)	1015
LguI	GCTCTTC	1 cut(s)	1827
LmnI	GCTCC	9 cut(s)	388, 677, 889, 1673, 1983, 2024, 2032, 2585, 2653
Lsp1109I	GCAGC	3 cut(s)	289, 328, 2308
LweI	GCATC	8 cut(s)	256, 466, 538, 560, 1567, 2230, 2311, 2597
MaeII	ACGT	3 cut(s)	785, 1026, 1119
MaeIII	GTNAC	4 cut(s)	2230, 2350, 2617, 2727
MbiI	CCGCTC	1 cut(s)	1668
MboII	GAAGA	7 cut(s)	143, 388, 888, 965, 1619, 1844, 2690
MfeI	CAATTG	1 cut(s)	2031
MflI	RGATCY	3 cut(s)	525, 691, 2483
MhlI	GDGCHC	4 cut(s)	393, 1409, 2029, 2648
MlsI	TGGCCA	1 cut(s)	1237
MluNI	TGGCCA	1 cut(s)	1237
MlyI	GAGTC	3 cut(s)	261, 1940, 2326
MmeI	TCCRAC	1 cut(s)	1829
Mox20I	TGGCCA	1 cut(s)	1237
Mph1103I	ATGCAT	1 cut(s)	553
MscI	TGGCCA	1 cut(s)	1237
MseI	TTAA	4 cut(s)	507, 1149, 2211, 2259
MslI	CAYNNNNRTG	3 cut(s)	1025, 1557, 2019
Msp20I	TGGCCA	1 cut(s)	1237
MspA1I	CMGCKG	2 cut(s)	280, 2363
MspI	CCGG	5 cut(s)	69, 828, 881, 1066, 1415
MspR9I	CCNGG	8 cut(s)	829, 1066, 1137, 1239, 1416, 1425, 2172, 2761
MunI	CAATTG	1 cut(s)	2031
Mva1269I	GAATGC	2 cut(s)	1082, 2078
MvaI	CCWGG	5 cut(s)	1137, 1239, 1425, 2172, 2761
MwoI	GCNNNNNNNGC	6 cut(s)	325, 1446, 1544, 1898, 2033, 2375
NciI	CCSGG	3 cut(s)	829, 1066, 1416
NcoI	CCATGG	1 cut(s)	586
NdeI	CATATG	1 cut(s)	2452
NlaIV	GGNNCC	6 cut(s)	196, 291, 357, 673, 885, 1785
NmeAIII	GCCGAG	1 cut(s)	135
NmuCI	GTSAC	2 cut(s)	2617, 2727
NsbI	TGCGCA	1 cut(s)	1031
NsiI	ATGCAT	1 cut(s)	553
NspI	RCATGY	1 cut(s)	2255
PaeR7I	CTCGAG	1 cut(s)	2597
PagI	TCATGA	1 cut(s)	1312
PciSI	GCTCTTC	1 cut(s)	1827
PctI	GAATGC	2 cut(s)	1082, 2078
PfeI	GAWTC	3 cut(s)	151, 776, 909
PflMI	CCANNNNNTGG	1 cut(s)	2760
PfoI	TCCNGGA	3 cut(s)	827, 1135, 2759
PkrI	GCNGC	4 cut(s)	279, 318, 1650, 2298
PleI	GAGTC	3 cut(s)	260, 1939, 2326
PpsI	GAGTC	3 cut(s)	260, 1939, 2326
PpuMI	RGGWCCY	1 cut(s)	355
PshBI	ATTAAT	1 cut(s)	1149
PsiI	TTATAA	1 cut(s)	972
Psp124BI	GAGCTC	2 cut(s)	393, 2029
Psp5II	RGGWCCY	1 cut(s)	355
Psp6I	CCWGG	5 cut(s)	1135, 1237, 1423, 2170, 2759
PspFI	CCCAGC	4 cut(s)	579, 2359, 2363, 2563
PspGI	CCWGG	5 cut(s)	1135, 1237, 1423, 2170, 2759
PspN4I	GGNNCC	6 cut(s)	196, 291, 357, 673, 885, 1785
PspPI	GGNCC	3 cut(s)	194, 355, 485
PspPPI	RGGWCCY	1 cut(s)	355
PsrI	GAACNNNNNNTAC	2 cut(s)	1138, 1170
PstNI	CAGNNNCTG	1 cut(s)	1244
PsuI	RGATCY	3 cut(s)	525, 691, 2483
PvuII	CAGCTG	1 cut(s)	2363
RseI	CAYNNNNRTG	3 cut(s)	1025, 1557, 2019
SacI	GAGCTC	2 cut(s)	393, 2029
SapI	GCTCTTC	1 cut(s)	1827
SaqAI	TTAA	4 cut(s)	507, 1149, 2211, 2259
SatI	GCNGC	4 cut(s)	278, 317, 1649, 2297
Sau96I	GGNCC	3 cut(s)	194, 355, 485
ScaI	AGTACT	2 cut(s)	456, 2089
SchI	GAGTC	3 cut(s)	261, 1940, 2326
ScrFI	CCNGG	8 cut(s)	829, 1066, 1137, 1239, 1416, 1425, 2172, 2761
SduI	GDGCHC	4 cut(s)	393, 1409, 2029, 2648
SfaNI	GCATC	8 cut(s)	256, 466, 538, 560, 1567, 2230, 2311, 2597
SfcI	CTRYAG	1 cut(s)	2613
Sfr274I	CTCGAG	1 cut(s)	2597
SinI	GGWCC	2 cut(s)	194, 355
SlaI	CTCGAG	1 cut(s)	2597
SmiMI	CAYNNNNRTG	3 cut(s)	1025, 1557, 2019
SmlI	CTYRAG	3 cut(s)	521, 2132, 2597
SmoI	CTYRAG	3 cut(s)	521, 2132, 2597
SpeI	ACTAGT	2 cut(s)	833, 1541
SsiI	CCGC	7 cut(s)	147, 280, 408, 1648, 1666, 2109, 2580
SspI	AATATT	1 cut(s)	1776
SstI	GAGCTC	2 cut(s)	393, 2029
StyD4I	CCNGG	8 cut(s)	827, 1064, 1135, 1237, 1414, 1423, 2170, 2759
StyI	CCWWGG	5 cut(s)	351, 586, 1518, 1907, 2776
TaiI	ACGT	3 cut(s)	788, 1029, 1122
TaqI	TCGA	5 cut(s)	462, 1951, 2403, 2457, 2598
TatI	WGTACW	6 cut(s)	454, 858, 1167, 1246, 1992, 2087
TauI	GCSGC	1 cut(s)	1651
TfiI	GAWTC	3 cut(s)	151, 776, 909
Tru1I	TTAA	4 cut(s)	507, 1149, 2211, 2259
Tru9I	TTAA	4 cut(s)	507, 1149, 2211, 2259
TscAI	CASTG	9 cut(s)	637, 664, 1409, 1931, 2026, 2049, 2436, 2622, 2655
TseFI	GTSAC	2 cut(s)	2617, 2727
TseI	GCWGC	3 cut(s)	277, 316, 2296
Tsp45I	GTSAC	2 cut(s)	2617, 2727
TspGWI	ACGGA	2 cut(s)	115, 312
TspRI	CASTG	9 cut(s)	637, 664, 1409, 1931, 2026, 2049, 2436, 2622, 2655
Van91I	CCANNNNNTGG	1 cut(s)	2760
VpaK11BI	GGWCC	2 cut(s)	194, 355
VspI	ATTAAT	1 cut(s)	1149
XapI	RAATTY	4 cut(s)	984, 1095, 1363, 2519
XbaI	TCTAGA	2 cut(s)	991, 2527
XceI	RCATGY	1 cut(s)	2255
XcmI	CCANNNNNNNNNTGG	2 cut(s)	894, 2704
XhoI	CTCGAG	1 cut(s)	2597
XmiI	GTMKAC	2 cut(s)	1420, 1694
ZrmI	AGTACT	2 cut(s)	456, 2089
Zsp2I	ATGCAT	1 cut(s)	553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.