Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0005422

Physical Location & Seq

Genomic Coordinates Reverse (-)

56482336 .. 56488264

Gene Structure 5929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG342000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGTGTTCAAGGACCAGTATCTTGAGATCTCCACAAAACTTCCCAAAGATGCATCCCTCTATGGGTTGGGAGAGAACTCCCAGCCCCATGGGATCAAGCTCTTCCCAAATGAACCTTATACCCTCTACACCACTGATGTCTCTGCTATCAATCTCAACACTGATTTGTATGGCTCCCACCCAGTTTACATGGATCTGAGGAATGTGGGTGGTGAGGCTTATGCTCATGCTGTTCTGTTGCTCAACAGTAATGGCATGGATGTGTTTTACAGAGGCAATTCTTTGACATATAAGGCCATTGGGGGTGTCTTTGATTTCTACTTCTTTTCTGGGACTAGTCCACTGGCTGTGGTTGACCAGTACACTTCTTTCATTGGCAGACCAGCTCCAATGCCTTACTGGTCTCTAGGATTCCACCAATGCAGATGGGGTTACCACAATTTATCAGTGGTTGAAGATGTTGTTGCTAATTATGAAAAGGCTCAAATCCCTCTAGATGTCATGTGGACTGATGATGATCACATGGATGTGCGCAAAGACTTCACTCTCAGCGCCATGAACTTCCCCCGGCCAAAGCTTCTGGCATTCCTAGACAAAATTCATAAGATTGGCATGAAGTACGTTGTCATTGTCGATCCTGGAATTGGTGTTAATAGCACGTATGGTGTGTACCAAAGAGGTCTTGCTAATGATGTCTTCATCAAGTATGATAATGAACCTTACTTGGCCCAGGTTTGGCCAGGGGCTGTAAACTTCCCTGACTTTCTCAATCCAAAAACTGTTTCATGGTGGAGTGATGAGATCAAGCGCTTTCATGAACTTGTCCCTGTTGATGGGTTATGGATTGACATGAACGAGGCTTCAAATTTCTGTTCTGGGAAATGCACAATTCCAAAGGGGACGACGTGCCCTACTCCTGGTATACCTGGCTGGATATGTTGCTTGGATTGTAAGAACATTACAAAGACGAGATGGGATGATCCACCTTACAAGATAAATGCTTCAGGGTTGCAAGTCCCCTTAGGGTTCAAAACCATTGCCACTAGTGCATATCATTACAATGGCGTTTTGGAGTACGATGCTCACAGTCTGTATGGTTTTTCCCAAACCATTGCAACTCATCAAGGTCTTCAAGGGATTGCAGGCAAGAGGCCGTTCATATTAACCCGCTCCACTTATGTTGGTTCAGGCAAGTATGCTGCACATTGGACAGGTGATAATAAGGGAACTTGGGAGGATTTGAAGATATCAATCTCTACTGTCCTCAATTTTGGAATATTTGGGGTGCCGATGGTTGGCGCAGATATATGTGGCTTCTATCCAGCACCCACTGAGGAGCTTTGCAATCGTTGGATTGAAGTAGGTGCTTTCTACCCCTTTTCAAGGGATCATGCAAACTTTGCTTCCCCAAGGCAAGAGCTTTATCAGTGGGAGTCGGTAGCTGAGTCTGCTAGAAATGCTCTTGGTATGAGGTATAAGCTCCTTCCTTATCTCTACACTTTGACCTATTTAGCTCATATCAGTGGAGCTCCAATTGCAAGGCCACTTTTCTTCTCATTCCCAACATATACTGAATGCTATGGCTTGAGTACTCAATTCTTGCTAGGGAGTGGTCTTCTGATCTCTCCAGTTGTTGAGGAAGGAAAATCTGAGGTTAAGGCATTGTTTCCCCCTGGAAGCTGGTACAGTTTATTTGATATGACACAGGCTGTTAATTCAAAGGGACAGTATGTTACACTTGATGCACCTTTGCATGTGGTTAATGTACATTTGTATCAGAACATTATTCTACCAATGCAGCAGGGTGGAACCGTGTCTAAAGAAGCGAGAAAGACTCCTTTTAGCCTCGTAGTAACCTTCCCAGCTGGGGCAAGCAATGCAACAGCGAAGGGGAACATTTTCATTGATGACGATGAGCTCCCAGAAATGAAACTCGGAAGTGGCTACTCCACATATGTTGATCTCTATGCAACTGTAAGTCAAGGATATGTGAAAGTATGGTCAGAAGTTCAGGAGGGAAAATTTGCTCTAGACCAAGGTTTGATTGTTGAGAAGGTGAGCGTGCTGGGATTGGATGGAACTGGAGGAGCATCAGCTCTTGAGGTTGATGGAACCACAGTGACTAGTGTTTCGAAGATAGAGCTGAGCACATTGGAGCAGGAGTACCATGAGGAGGTGGAAGATGGAGAGAACAAGACCAAGATTGTAATGGTCCAGGTCAGTGGTCTATCACTTCCTGTGGGGAAGAACTTTGCCATGTCCTGGAAAATGAGTGCCAAAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010383 GO:0010410 GO:0010411 GO:0016052 GO:0016787 GO:0016798 GO:0030054 GO:0030312 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045493 GO:0046556 GO:0046686 GO:0048046 GO:0050896 GO:0055044 GO:0071554 GO:0071704 GO:0071944 GO:0080176 GO:0097599 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Gal_mutarotas_2 Glyco_hydro_31 NtCtMGAM_N

Protein Analysis

761

Amino Acids

84.37

Weight (kDa)

5.45

Isoelectric Point (pI)

32.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	5 - 83	3.6e-07	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	128 - 501	4e-120	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd	PF21365	509 - 597	4.7e-19	Glycosyl hydrolase family 31 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68560 AT3G45940
fragaria_vesca	FvH4_4g27500
malus_domestica	MD13G1042700.v1.1 MD16G1043700.v1.1
prunus_persica	Prupe.1G309900_v2.0.a1 Prupe.2G051500_v2.0.a1 Prupe.2G076500_v2.0.a1
pyrus_communis	pycom13g03740 pycom16g03770
rosa_chinensis	RchiOBHm_Chr4g0435281 RchiOBHm_Chr4g0435321
rosa_laevigata	RLG00000006601
rosa_multiflora	Rmu_sc0000357.1_g000002 Rmu_sc0001940.1_g000004 Rmu_sc0002132.1_g000062
rosa_roxburghii	Rroxscaffold_5G00376570 Rroxscaffold_5G00376580
rosa_rugosa	Rorug04G0284200
rosa_samantha	Rh4AG339600 Rh4AG339800 Rh4BG348000 Rh4BG348300 Rh4CG362600 Rh4CG362900 Rh4DG342000 Rh4DG342100
rosa_wichuraiana	Rw4G029630 Rw4G029640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	533
AccB1I	GGYRCC	1 cut(s)	1285
AccB7I	CCANNNNNTGG	1 cut(s)	2262
AccBSI	CCGCTC	1 cut(s)	1170
AccI	GTMKAC	1 cut(s)	922
AciI	CCGC	1 cut(s)	1168
AclWI	GGATC	5 cut(s)	101, 201, 629, 974, 1395
AcoI	YGGCCR	2 cut(s)	569, 737
AcsI	RAATTY	3 cut(s)	597, 865, 2021
AcuI	CTGAAG	1 cut(s)	987
AfaI	GTAC	8 cut(s)	362, 620, 671, 1076, 1591, 1685, 1767, 2165
AfeI	AGCGCT	1 cut(s)	809
AgsI	TTSAA	9 cut(s)	10, 455, 864, 1030, 1133, 1243, 1358, 1383, 1719
AhlI	ACTAGT	3 cut(s)	335, 1043, 2123
AjiI	CACGTC	1 cut(s)	906
AjnI	CCWGG	8 cut(s)	637, 729, 739, 916, 925, 1672, 2214, 2261
AjuI	GAANNNNNNNTTGG	2 cut(s)	766, 798
Alw21I	GWGCWC	3 cut(s)	1531, 1920, 2150
Alw26I	GTCTC	2 cut(s)	145, 408
AlwI	GGATC	5 cut(s)	101, 201, 629, 974, 1395
AlwNI	CAGNNNCTG	1 cut(s)	746
Aor51HI	AGCGCT	1 cut(s)	809
AoxI	GGCC	6 cut(s)	294, 569, 726, 737, 1151, 1541
ApeKI	GCWGC	2 cut(s)	1199, 1798
ApoI	RAATTY	3 cut(s)	597, 865, 2021
ArsI	GACNNNNNNTTYG	2 cut(s)	2113, 2145
Asp700I	GAANNNNTTC	1 cut(s)	1898
AspLEI	GCGC	4 cut(s)	534, 554, 810, 1301
AspS9I	GGNCC	3 cut(s)	13, 727, 2212
AsuC2I	CCSGG	1 cut(s)	568
AsuHPI	GGTGA	3 cut(s)	224, 1226, 2068
AsuII	TTCGAA	1 cut(s)	2132
AvaII	GGWCC	2 cut(s)	13, 2212
AxyI	CCTNAGG	1 cut(s)	1021
BaeGI	GKGCMC	1 cut(s)	911
BaeI	ACNNNNGTAYC	2 cut(s)	1757, 1790
BalI	TGGCCA	1 cut(s)	739
BanI	GGYRCC	1 cut(s)	1285
BanII	GRGCYC	2 cut(s)	1531, 1920
BbsI	GAAGAC	3 cut(s)	688, 1121, 1607
Bbv12I	GWGCWC	3 cut(s)	1531, 1920, 2150
BbvI	GCAGC	2 cut(s)	1186, 1810
BccI	CCATC	7 cut(s)	420, 827, 966, 1285, 2069, 2102, 2177
BceAI	ACGGC	1 cut(s)	1138
BciT130I	CCWGG	8 cut(s)	639, 731, 741, 918, 927, 1674, 2216, 2263
BclI	TGATCA	1 cut(s)	517
BcnI	CCSGG	1 cut(s)	568
BcoDI	GTCTC	2 cut(s)	145, 408
BcuI	ACTAGT	3 cut(s)	335, 1043, 2123
BfaI	CTAG	9 cut(s)	336, 407, 494, 590, 1044, 1452, 1604, 2030, 2124
BfoI	RGCGCY	2 cut(s)	555, 811
BglII	AGATCT	1 cut(s)	27
BisI	GCNGC	2 cut(s)	1200, 1799
BlpI	GCTNAGC	1 cut(s)	2144
BlsI	GCNGC	2 cut(s)	1201, 1800
BmcAI	AGTACT	1 cut(s)	1591
Bme1390I	CCNGG	9 cut(s)	568, 639, 731, 741, 918, 927, 1674, 2216, 2263
Bme18I	GGWCC	2 cut(s)	13, 2212
BmgBI	CACGTC	1 cut(s)	906
BmgT120I	GGNCC	3 cut(s)	13, 727, 2212
BmiI	GGNNCC	4 cut(s)	175, 1287, 1810, 2113
BmrFI	CCNGG	9 cut(s)	568, 639, 731, 741, 918, 927, 1674, 2216, 2263
BmrI	ACTGGG	1 cut(s)	176
BmsI	GCATC	5 cut(s)	40, 62, 1069, 1732, 2099
BmuI	ACTGGG	1 cut(s)	176
BpiI	GAAGAC	3 cut(s)	688, 1121, 1607
BplI	GAGNNNNNCTC	2 cut(s)	1819, 1851
BpmI	CTGGAG	2 cut(s)	1611, 2103
Bpu1102I	GCTNAGC	1 cut(s)	2144
Bpu14I	TTCGAA	1 cut(s)	2132
BpuEI	CTTGAG	3 cut(s)	44, 1606, 2120
BpuMI	CCSGG	1 cut(s)	568
BsaAI	YACGTR	1 cut(s)	660
BsaBI	GATNNNNATC	2 cut(s)	516, 1250
BsaI	GGTCTC	1 cut(s)	408
BsaJI	CCNNGG	7 cut(s)	88, 566, 729, 740, 1409, 1672, 2035
BsaXI	ACNNNNNCTCC	2 cut(s)	2147, 2177
Bse1I	ACTGG	7 cut(s)	16, 182, 348, 358, 404, 1628, 2086
Bse21I	CCTNAGG	1 cut(s)	1021
Bse3DI	GCAATG	3 cut(s)	1035, 1110, 1882
Bse8I	GATNNNNATC	2 cut(s)	516, 1250
BseBI	CCWGG	8 cut(s)	639, 731, 741, 918, 927, 1674, 2216, 2263
BseDI	CCNNGG	7 cut(s)	88, 566, 729, 740, 1409, 1672, 2035
BseGI	GGATG	5 cut(s)	53, 265, 532, 982, 2080
BseJI	GATNNNNATC	2 cut(s)	516, 1250
BseMI	GCAATG	3 cut(s)	1035, 1110, 1882
BseMII	CTCAG	6 cut(s)	188, 562, 1323, 1434, 1641, 2135
BseNI	ACTGG	7 cut(s)	16, 182, 348, 358, 404, 1628, 2086
BseRI	GAGGAG	3 cut(s)	1349, 2100, 2186
BseSI	GKGCMC	1 cut(s)	911
BseXI	GCAGC	2 cut(s)	1186, 1810
BseYI	CCCAGC	4 cut(s)	81, 1861, 1865, 2065
BsgI	GTGCAG	1 cut(s)	1185
BshFI	GGCC	6 cut(s)	296, 571, 728, 739, 1153, 1543
BshNI	GGYRCC	1 cut(s)	1285
BsiHKAI	GWGCWC	3 cut(s)	1531, 1920, 2150
BsiSI	CCGG	1 cut(s)	568
BslFI	GGGAC	5 cut(s)	346, 809, 913, 1001, 1737
BsmAI	GTCTC	2 cut(s)	145, 408
BsmFI	GGGAC	5 cut(s)	346, 809, 913, 1001, 1737
BsmI	GAATGC	2 cut(s)	584, 1580
BsnI	GGCC	6 cut(s)	296, 571, 728, 739, 1153, 1543
Bso31I	GGTCTC	1 cut(s)	408
Bsp119I	TTCGAA	1 cut(s)	2132
Bsp1286I	GDGCHC	4 cut(s)	911, 1531, 1920, 2150
Bsp1407I	TGTACA	1 cut(s)	1765
Bsp1720I	GCTNAGC	1 cut(s)	2144
Bsp19I	CCATGG	1 cut(s)	88
BspACI	CCGC	1 cut(s)	1168
BspANI	GGCC	6 cut(s)	296, 571, 728, 739, 1153, 1543
BspCNI	CTCAG	6 cut(s)	189, 561, 1324, 1435, 1642, 2136
BspHI	TCATGA	1 cut(s)	814
BspLI	GGNNCC	4 cut(s)	175, 1287, 1810, 2113
BspPI	GGATC	5 cut(s)	101, 201, 629, 974, 1395
BspQI	GCTCTTC	1 cut(s)	107
BspT104I	TTCGAA	1 cut(s)	2132
BspT107I	GGYRCC	1 cut(s)	1285
BspTNI	GGTCTC	1 cut(s)	408
BsrBI	CCGCTC	1 cut(s)	1170
BsrDI	GCAATG	3 cut(s)	1035, 1110, 1882
BsrGI	TGTACA	1 cut(s)	1765
BsrI	ACTGG	7 cut(s)	16, 182, 348, 358, 404, 1628, 2086
BssECI	CCNNGG	7 cut(s)	88, 566, 729, 740, 1409, 1672, 2035
BssNAI	GTATAC	1 cut(s)	923
BssT1I	CCWWGG	3 cut(s)	88, 1409, 2035
Bst1107I	GTATAC	1 cut(s)	923
Bst2UI	CCWGG	8 cut(s)	639, 731, 741, 918, 927, 1674, 2216, 2263
Bst4CI	ACNGT	9 cut(s)	248, 781, 1088, 1261, 1688, 1728, 1813, 1975, 2119
Bst6I	CTCTTC	1 cut(s)	107
BstAPI	GCANNNNNTGC	2 cut(s)	1400, 1877
BstAUI	TGTACA	1 cut(s)	1765
BstBAI	YACGTR	1 cut(s)	660
BstBI	TTCGAA	1 cut(s)	2132
BstC8I	GCNNGC	3 cut(s)	1144, 1873, 2063
BstDEI	CTNAG	7 cut(s)	197, 548, 1021, 1332, 1443, 1650, 2144
BstDSI	CCRYGG	1 cut(s)	88
BstEII	GGTNACC	1 cut(s)	431
BstENI	CCTNNNNNAGG	1 cut(s)	1381
BstF5I	GGATG	5 cut(s)	53, 265, 532, 982, 2080
BstH2I	RGCGCY	2 cut(s)	555, 811
BstHHI	GCGC	4 cut(s)	534, 554, 810, 1301
BstMAI	GTCTC	2 cut(s)	145, 408
BstMWI	GCNNNNNNNGC	6 cut(s)	1046, 1400, 1448, 1457, 1535, 1877
BstNI	CCWGG	8 cut(s)	639, 731, 741, 918, 927, 1674, 2216, 2263
BstNSI	RCATGY	1 cut(s)	1757
BstPI	GGTNACC	1 cut(s)	431
BstSCI	CCNGG	9 cut(s)	566, 637, 729, 739, 916, 925, 1672, 2214, 2261
BstSLI	GKGCMC	1 cut(s)	911
BstV1I	GCAGC	2 cut(s)	1186, 1810
BstV2I	GAAGAC	3 cut(s)	688, 1121, 1607
BstX2I	RGATCY	2 cut(s)	27, 193
BstXI	CCANNNNNNTGG	2 cut(s)	89, 2222
BstYI	RGATCY	2 cut(s)	27, 193
BstZ17I	GTATAC	1 cut(s)	923
Bsu36I	CCTNAGG	1 cut(s)	1021
BsuRI	GGCC	6 cut(s)	296, 571, 728, 739, 1153, 1543
BtgI	CCRYGG	1 cut(s)	88
BtrI	CACGTC	1 cut(s)	906
BtsCI	GGATG	5 cut(s)	53, 265, 532, 982, 2080
BtsIMutI	CAGTG	9 cut(s)	132, 159, 341, 453, 1329, 1433, 1528, 2124, 2227
Cac8I	GCNNGC	3 cut(s)	1144, 1873, 2063
CaiI	CAGNNNCTG	1 cut(s)	746
CciI	TCATGA	1 cut(s)	814
CfoI	GCGC	4 cut(s)	534, 554, 810, 1301
Cfr13I	GGNCC	3 cut(s)	13, 727, 2212
Csp6I	GTAC	8 cut(s)	361, 619, 670, 1075, 1590, 1684, 1766, 2164
CspCI	CAANNNNNGTGG	4 cut(s)	1162, 1197, 1939, 1974
CviQI	GTAC	8 cut(s)	361, 619, 670, 1075, 1590, 1684, 1766, 2164
DdeI	CTNAG	7 cut(s)	197, 548, 1021, 1332, 1443, 1650, 2144
EaeI	YGGCCR	2 cut(s)	569, 737
Eam1104I	CTCTTC	1 cut(s)	107
EarI	CTCTTC	1 cut(s)	107
Ecl136II	GAGCTC	2 cut(s)	1529, 1918
Eco130I	CCWWGG	3 cut(s)	88, 1409, 2035
Eco24I	GRGCYC	2 cut(s)	1531, 1920
Eco31I	GGTCTC	1 cut(s)	408
Eco32I	GATATC	1 cut(s)	1248
Eco47I	GGWCC	2 cut(s)	13, 2212
Eco47III	AGCGCT	1 cut(s)	809
Eco53kI	GAGCTC	2 cut(s)	1529, 1918
Eco57I	CTGAAG	1 cut(s)	987
Eco81I	CCTNAGG	1 cut(s)	1021
Eco91I	GGTNACC	1 cut(s)	431
EcoICRI	GAGCTC	2 cut(s)	1529, 1918
EcoNI	CCTNNNNNAGG	1 cut(s)	1381
EcoO65I	GGTNACC	1 cut(s)	431
EcoRII	CCWGG	8 cut(s)	637, 729, 739, 916, 925, 1672, 2214, 2261
EcoRV	GATATC	1 cut(s)	1248
EcoT14I	CCWWGG	3 cut(s)	88, 1409, 2035
EcoT22I	ATGCAT	1 cut(s)	55
EcoT38I	GRGCYC	2 cut(s)	1531, 1920
ErhI	CCWWGG	3 cut(s)	88, 1409, 2035
FaqI	GGGAC	5 cut(s)	346, 809, 913, 1001, 1737
FauI	CCCGC	1 cut(s)	1175
FauNDI	CATATG	1 cut(s)	1954
FbaI	TGATCA	1 cut(s)	517
FblI	GTMKAC	1 cut(s)	922
Fnu4HI	GCNGC	2 cut(s)	1200, 1799
FokI	GGATG	5 cut(s)	40, 272, 539, 989, 2087
FriOI	GRGCYC	2 cut(s)	1531, 1920
Fsp4HI	GCNGC	2 cut(s)	1200, 1799
FspBI	CTAG	9 cut(s)	336, 407, 494, 590, 1044, 1452, 1604, 2030, 2124
FspI	TGCGCA	1 cut(s)	533
GlaI	GCGC	4 cut(s)	533, 553, 809, 1300
GluI	GCNGC	2 cut(s)	1200, 1799
GsaI	CCCAGC	4 cut(s)	85, 1865, 1869, 2069
GsuI	CTGGAG	2 cut(s)	1611, 2103
HaeII	RGCGCY	2 cut(s)	555, 811
HaeIII	GGCC	6 cut(s)	296, 571, 728, 739, 1153, 1543
HapII	CCGG	1 cut(s)	568
HhaI	GCGC	4 cut(s)	534, 554, 810, 1301
Hin6I	GCGC	4 cut(s)	532, 552, 808, 1299
HinP1I	GCGC	4 cut(s)	532, 552, 808, 1299
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HindIII	AAGCTT	1 cut(s)	575
HinfI	GANTC	4 cut(s)	411, 1433, 1445, 1834
HpaII	CCGG	1 cut(s)	568
HphI	GGTGA	3 cut(s)	224, 1226, 2068
Hpy166II	GTNNAC	8 cut(s)	187, 341, 355, 363, 507, 670, 751, 923
Hpy188I	TCNGA	6 cut(s)	198, 1620, 1651, 1779, 1937, 2005
Hpy188III	TCNNGA	6 cut(s)	23, 494, 815, 2012, 2030, 2099
Hpy8I	GTNNAC	8 cut(s)	187, 341, 355, 363, 507, 670, 751, 923
Hpy99I	CGWCG	1 cut(s)	907
HpyAV	CCTTC	5 cut(s)	1493, 1634, 1867, 1882, 2047
HpyCH4III	ACNGT	9 cut(s)	248, 781, 1088, 1261, 1688, 1728, 1813, 1975, 2119
HpyCH4IV	ACGT	3 cut(s)	621, 659, 905
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1046, 1400, 1448, 1457, 1535, 1877
HpyF3I	CTNAG	7 cut(s)	197, 548, 1021, 1332, 1443, 1650, 2144
HpySE526I	ACGT	3 cut(s)	621, 659, 905
HspAI	GCGC	4 cut(s)	532, 552, 808, 1299
Ksp22I	TGATCA	1 cut(s)	517
LguI	GCTCTTC	1 cut(s)	107
Lsp1109I	GCAGC	2 cut(s)	1186, 1810
LweI	GCATC	5 cut(s)	40, 62, 1069, 1732, 2099
MaeI	CTAG	9 cut(s)	336, 407, 494, 590, 1044, 1452, 1604, 2030, 2124
MaeII	ACGT	3 cut(s)	621, 659, 905
MaeIII	GTNAC	4 cut(s)	431, 1732, 1852, 2119
MbiI	CCGCTC	1 cut(s)	1170
MfeI	CAATTG	1 cut(s)	1533
MflI	RGATCY	2 cut(s)	27, 193
MhlI	GDGCHC	4 cut(s)	911, 1531, 1920, 2150
MlsI	TGGCCA	1 cut(s)	739
MluNI	TGGCCA	1 cut(s)	739
MlyI	GAGTC	3 cut(s)	1442, 1454, 1828
MmeI	TCCRAC	1 cut(s)	1331
Mox20I	TGGCCA	1 cut(s)	739
Mph1103I	ATGCAT	1 cut(s)	55
MroXI	GAANNNNTTC	1 cut(s)	1898
MscI	TGGCCA	1 cut(s)	739
MseI	TTAA	5 cut(s)	651, 1163, 1656, 1713, 1761
MslI	CAYNNNNRTG	5 cut(s)	260, 525, 527, 1059, 1521
Msp20I	TGGCCA	1 cut(s)	739
MspA1I	CMGCKG	1 cut(s)	1865
MspI	CCGG	1 cut(s)	568
MspR9I	CCNGG	9 cut(s)	568, 639, 731, 741, 918, 927, 1674, 2216, 2263
MunI	CAATTG	1 cut(s)	1533
Mva1269I	GAATGC	2 cut(s)	584, 1580
MvaI	CCWGG	8 cut(s)	639, 731, 741, 918, 927, 1674, 2216, 2263
MwoI	GCNNNNNNNGC	6 cut(s)	1046, 1400, 1448, 1457, 1535, 1877
NciI	CCSGG	1 cut(s)	568
NcoI	CCATGG	1 cut(s)	88
NdeI	CATATG	1 cut(s)	1954
NlaIV	GGNNCC	4 cut(s)	175, 1287, 1810, 2113
NmuCI	GTSAC	1 cut(s)	2119
NsbI	TGCGCA	1 cut(s)	533
NsiI	ATGCAT	1 cut(s)	55
NspI	RCATGY	1 cut(s)	1757
NspV	TTCGAA	1 cut(s)	2132
PagI	TCATGA	1 cut(s)	814
PciSI	GCTCTTC	1 cut(s)	107
PctI	GAATGC	2 cut(s)	584, 1580
PdmI	GAANNNNTTC	1 cut(s)	1898
PfeI	GAWTC	1 cut(s)	411
PflMI	CCANNNNNTGG	1 cut(s)	2262
PfoI	TCCNGGA	2 cut(s)	637, 2261
PkrI	GCNGC	2 cut(s)	1201, 1800
PleI	GAGTC	3 cut(s)	1441, 1453, 1828
PpsI	GAGTC	3 cut(s)	1441, 1453, 1828
Ppu21I	YACGTR	1 cut(s)	660
Psp124BI	GAGCTC	2 cut(s)	1531, 1920
Psp6I	CCWGG	8 cut(s)	637, 729, 739, 916, 925, 1672, 2214, 2261
PspEI	GGTNACC	1 cut(s)	431
PspFI	CCCAGC	4 cut(s)	81, 1861, 1865, 2065
PspGI	CCWGG	8 cut(s)	637, 729, 739, 916, 925, 1672, 2214, 2261
PspN4I	GGNNCC	4 cut(s)	175, 1287, 1810, 2113
PspPI	GGNCC	3 cut(s)	13, 727, 2212
PstNI	CAGNNNCTG	1 cut(s)	746
PsuI	RGATCY	2 cut(s)	27, 193
PvuII	CAGCTG	1 cut(s)	1865
RsaI	GTAC	8 cut(s)	362, 620, 671, 1076, 1591, 1685, 1767, 2165
RsaNI	GTAC	8 cut(s)	361, 619, 670, 1075, 1590, 1684, 1766, 2164
RseI	CAYNNNNRTG	5 cut(s)	260, 525, 527, 1059, 1521
SacI	GAGCTC	2 cut(s)	1531, 1920
SapI	GCTCTTC	1 cut(s)	107
SaqAI	TTAA	5 cut(s)	651, 1163, 1656, 1713, 1761
SatI	GCNGC	2 cut(s)	1200, 1799
Sau96I	GGNCC	3 cut(s)	13, 727, 2212
ScaI	AGTACT	1 cut(s)	1591
SchI	GAGTC	3 cut(s)	1442, 1454, 1828
ScrFI	CCNGG	9 cut(s)	568, 639, 731, 741, 918, 927, 1674, 2216, 2263
SduI	GDGCHC	4 cut(s)	911, 1531, 1920, 2150
SfaNI	GCATC	5 cut(s)	40, 62, 1069, 1732, 2099
SfuI	TTCGAA	1 cut(s)	2132
SinI	GGWCC	2 cut(s)	13, 2212
SmiMI	CAYNNNNRTG	5 cut(s)	260, 525, 527, 1059, 1521
SmlI	CTYRAG	3 cut(s)	23, 1585, 2099
SmoI	CTYRAG	3 cut(s)	23, 1585, 2099
SpeI	ACTAGT	3 cut(s)	335, 1043, 2123
SsiI	CCGC	1 cut(s)	1168
SspI	AATATT	1 cut(s)	1278
SspMI	CTAG	9 cut(s)	336, 407, 494, 590, 1044, 1452, 1604, 2030, 2124
SstI	GAGCTC	2 cut(s)	1531, 1920
StyD4I	CCNGG	9 cut(s)	566, 637, 729, 739, 916, 925, 1672, 2214, 2261
StyI	CCWWGG	3 cut(s)	88, 1409, 2035
TaaI	ACNGT	9 cut(s)	248, 781, 1088, 1261, 1688, 1728, 1813, 1975, 2119
TaiI	ACGT	3 cut(s)	624, 662, 908
TaqI	TCGA	2 cut(s)	633, 2132
TatI	WGTACW	3 cut(s)	360, 1589, 1765
TfiI	GAWTC	1 cut(s)	411
Tru1I	TTAA	5 cut(s)	651, 1163, 1656, 1713, 1761
Tru9I	TTAA	5 cut(s)	651, 1163, 1656, 1713, 1761
TscAI	CASTG	9 cut(s)	139, 166, 348, 453, 1336, 1433, 1528, 2124, 2227
TseFI	GTSAC	1 cut(s)	2119
TseI	GCWGC	2 cut(s)	1199, 1798
Tsp45I	GTSAC	1 cut(s)	2119
TspRI	CASTG	9 cut(s)	139, 166, 348, 453, 1336, 1433, 1528, 2124, 2227
Van91I	CCANNNNNTGG	1 cut(s)	2262
VpaK11BI	GGWCC	2 cut(s)	13, 2212
XagI	CCTNNNNNAGG	1 cut(s)	1381
XapI	RAATTY	3 cut(s)	597, 865, 2021
XbaI	TCTAGA	2 cut(s)	493, 2029
XceI	RCATGY	1 cut(s)	1757
XcmI	CCANNNNNNNNNTGG	2 cut(s)	396, 2206
XmiI	GTMKAC	1 cut(s)	922
XmnI	GAANNNNTTC	1 cut(s)	1898
XspI	CTAG	9 cut(s)	336, 407, 494, 590, 1044, 1452, 1604, 2030, 2124
ZrmI	AGTACT	1 cut(s)	1591
Zsp2I	ATGCAT	1 cut(s)	55

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.