Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005422

Physical Location & Seq

Genomic Coordinates Reverse (-)

2482896 .. 2486356

Gene Structure 3461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g03740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGTCCTCCTCCTCCTCCTCCTCCTCCTCCCAATGTCTCTCTTCTCTTCTTCTAGTGCTGTTAATCCTCTGTTTCTCTGGTGTGAGCTCAGCTGACACCGTTAACCCCACCATCAAGGGCAAAGGCTACCGTCTCATCTCCATCGAAGAAACCCCTGACGGCGGCCTTCTGGGTCTTCTCCAGCTCAAACAAAAGTCTAAAACCTACGGCCCCGATATCCCCCTCCTGCAGCTCTATGTCAAGCACGAGACGCAGGACCGGTTGAGAGTCCACATAACAGATGCTCAGAAGCAGAGGTGGGAGGTTCCCTACAACCTCCTCCCCAGGGAGCAGCCGCCGTCTCTGAAACAAACCATTACGCCGTCAGGGAAGACGAAGAACCCCATCGAAGTCTCAGAGTACTCCGGCTCTGAGCTCATTCTCAGCTCCATCTCCGACCCATTTGGGTTCGCCGTCCAGAGGAAGTCCGACGGGCAGGTCCTCTTCAATTCAAGCTCCGAATCCAAAGACCCATATGGCGAACTGGTGTTTAAGGACCAGTACCTGGAGATATCCACCCGACTGCCGAAGGACGCCTCCCTGTACGGCCTCGGAGAGAACTCTCAGCCGCACGGGATCAAGCTCTACCCGAACGATCCATACACCCTCTTCACCACCGACGTCTCGGCGATCAATCTCAACACTGATTTGTACGGGTCCCACCCGGTTTACATGGATCTCCGGAATGTGGGCAGCGAGGCTTACGCACACTCTGTTCTGCTGCTCAACAGCAATGGCATGGATGTGTTTTACAGAGGGACTTCTCTCACCTACAAGGTCATTGGGGGTGTTTTCGACTTTTACTTCTTTGCCGGGCCGACGCCGTTGGGCGTTGTCGACCAGTACACGGCGTTCATCGGCAGACCGGCCCCGATGCCCTACTGGTCTCTTGGATTCCACCAATGCAGATGGGGTTACCACAACTTATCAGTAGTTGAAGACGTTGTTGCGAACTACAAAAAGGCTGAAATCCCGCTAGATGTCATTTGGAATGACGATGATCACATGGACGGACACAAAGACTTCACCCTCAACCCCAAAAACTACGCTCGTCCAAAGCTCTTGGCATTCCTAGACAAAATACATAAGATAGGCATGAAGTACATTGTCATTATCGATCCTGGAATTGGTGTTAATACCAGTTACGGTGTATACCAAAGAGGATTAGCGAATGATGTTTTCATTAAATATGAGGGTGAACCCTACTTGGCCCAAGTTTGGCCAGGGGCTGTAAACTTCCCCGACTTCCTCAACCCCAAAACTGTTTCATGGTGGGGTGATGAGATCCGCCGCTTTCATGAACTTGTCCCAGTTGATGGCTTATGGATTGACATGAACGAAGCTTCAAATTTCTGTTCTGGGAAGTGCAAAATTCCAAACAAGCAGTGTCCGACGGGTACAGGACCTGGCTGGGTATGTTGCTTGGATTGCAAAAACATTACAAAGACGAGATGGGATGATCCACCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010383 GO:0010410 GO:0010411 GO:0016052 GO:0016787 GO:0016798 GO:0030054 GO:0030312 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045493 GO:0046556 GO:0046686 GO:0048046 GO:0050896 GO:0055044 GO:0071554 GO:0071704 GO:0071944 GO:0080176 GO:0097599 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Gal_mutarotas_2 Glyco_hydro_31 NtCtMGAM_N

Protein Analysis

503

Amino Acids

56.16

Weight (kDa)

5.91

Isoelectric Point (pI)

36.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	87 - 246	3.4e-10	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	302 - 475	2.7e-56	Glycosyl hydrolases family 31 TIM-barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68560 AT3G45940
fragaria_vesca	FvH4_4g27500
malus_domestica	MD13G1042700.v1.1 MD16G1043700.v1.1
prunus_persica	Prupe.1G309900_v2.0.a1 Prupe.2G051500_v2.0.a1 Prupe.2G076500_v2.0.a1
pyrus_communis	pycom13g03740 pycom16g03770
rosa_chinensis	RchiOBHm_Chr4g0435281 RchiOBHm_Chr4g0435321
rosa_laevigata	RLG00000006601
rosa_multiflora	Rmu_sc0000357.1_g000002 Rmu_sc0001940.1_g000004 Rmu_sc0002132.1_g000062
rosa_roxburghii	Rroxscaffold_5G00376570 Rroxscaffold_5G00376580
rosa_rugosa	Rorug04G0284200
rosa_samantha	Rh4AG339600 Rh4AG339800 Rh4BG348000 Rh4BG348300 Rh4CG362600 Rh4CG362900 Rh4DG342000 Rh4DG342100
rosa_wichuraiana	Rw4G029630 Rw4G029640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	476
AatII	GACGTC	1 cut(s)	663
Acc36I	ACCTGC	1 cut(s)	466
AccB7I	CCANNNNNTGG	2 cut(s)	544, 1355
AccI	GTMKAC	2 cut(s)	876, 1191
AccIII	TCCGGA	1 cut(s)	720
AciI	CCGC	6 cut(s)	162, 335, 608, 1013, 1327, 1330
AclWI	GGATC	6 cut(s)	623, 629, 723, 1151, 1318, 1493
AcoI	YGGCCR	1 cut(s)	1259
AcsI	RAATTY	2 cut(s)	1387, 1410
AcyI	GRCGYC	3 cut(s)	573, 660, 860
AfaI	GTAC	7 cut(s)	401, 542, 584, 692, 884, 1142, 1438
AfiI	CCNNNNNNNGG	9 cut(s)	161, 325, 459, 544, 727, 886, 1166, 1257, 1355
AgeI	ACCGGT	1 cut(s)	258
AgsI	TTSAA	4 cut(s)	487, 492, 977, 1386
AjnI	CCWGG	5 cut(s)	323, 543, 1159, 1261, 1444
Alw21I	GWGCWC	2 cut(s)	89, 417
Alw26I	GTCTC	7 cut(s)	41, 137, 242, 345, 397, 667, 930
AlwI	GGATC	6 cut(s)	623, 629, 723, 1151, 1318, 1493
AlwNI	CAGNNNCTG	3 cut(s)	544, 1268, 1445
Aor13HI	TCCGGA	1 cut(s)	720
AoxI	GGCC	7 cut(s)	163, 208, 586, 854, 906, 1248, 1259
ApeKI	GCWGC	4 cut(s)	229, 331, 732, 760
ApoI	RAATTY	2 cut(s)	1387, 1410
AsiGI	ACCGGT	1 cut(s)	258
AspS9I	GGNCC	9 cut(s)	209, 256, 478, 535, 696, 854, 907, 1249, 1442
AsuC2I	CCSGG	2 cut(s)	704, 853
AsuHPI	GGTGA	5 cut(s)	643, 799, 1057, 1247, 1328
AvaII	GGWCC	5 cut(s)	256, 478, 535, 696, 1442
BalI	TGGCCA	1 cut(s)	1261
BanII	GRGCYC	2 cut(s)	89, 417
BauI	CACGAG	1 cut(s)	245
BbsI	GAAGAC	3 cut(s)	167, 377, 984
Bbv12I	GWGCWC	2 cut(s)	89, 417
BbvI	GCAGC	4 cut(s)	241, 343, 744, 747
BccI	CCATC	7 cut(s)	119, 149, 392, 437, 942, 1349, 1485
BceAI	ACGGC	8 cut(s)	175, 223, 322, 346, 437, 601, 847, 903
BciT130I	CCWGG	5 cut(s)	325, 545, 1161, 1263, 1446
BclI	TGATCA	1 cut(s)	1039
BcnI	CCSGG	2 cut(s)	704, 853
BcoDI	GTCTC	7 cut(s)	41, 137, 242, 345, 397, 667, 930
BfaI	CTAG	3 cut(s)	53, 1016, 1112
BfmI	CTRYAG	1 cut(s)	227
BfuAI	ACCTGC	1 cut(s)	466
BisI	GCNGC	8 cut(s)	163, 230, 332, 335, 608, 733, 761, 1330
BlpI	GCTNAGC	1 cut(s)	88
BlsI	GCNGC	8 cut(s)	164, 231, 333, 336, 609, 734, 762, 1331
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	7 cut(s)	325, 545, 704, 853, 1161, 1263, 1446
Bme18I	GGWCC	5 cut(s)	256, 478, 535, 696, 1442
BmgT120I	GGNCC	9 cut(s)	209, 256, 478, 535, 696, 854, 907, 1249, 1442
BmiI	GGNNCC	5 cut(s)	211, 306, 697, 698, 909
BmrFI	CCNGG	7 cut(s)	325, 545, 704, 853, 1161, 1263, 1446
BmrI	ACTGGG	1 cut(s)	1343
BmsI	GCATC	2 cut(s)	271, 903
BmuI	ACTGGG	1 cut(s)	1343
BpiI	GAAGAC	3 cut(s)	167, 377, 984
BpmI	CTGGAG	2 cut(s)	164, 566
Bpu1102I	GCTNAGC	1 cut(s)	88
BpuMI	CCSGG	2 cut(s)	704, 853
Bsa29I	ATCGAT	1 cut(s)	1155
BsaHI	GRCGYC	3 cut(s)	573, 660, 860
BsaI	GGTCTC	1 cut(s)	930
BsaJI	CCNNGG	4 cut(s)	323, 324, 589, 1262
BsaWI	WCCGGW	2 cut(s)	258, 720
Bsc4I	CCNNNNNNNGG	9 cut(s)	161, 325, 459, 544, 727, 886, 1166, 1257, 1355
Bse118I	RCCGGY	2 cut(s)	258, 904
Bse1I	ACTGG	6 cut(s)	528, 538, 880, 926, 1179, 1349
Bse3DI	GCAATG	1 cut(s)	778
BseAI	TCCGGA	1 cut(s)	720
BseBI	CCWGG	5 cut(s)	325, 545, 1161, 1263, 1446
BseCI	ATCGAT	1 cut(s)	1155
BseDI	CCNNGG	4 cut(s)	323, 324, 589, 1262
BseGI	GGATG	2 cut(s)	787, 1501
BseLI	CCNNNNNNNGG	9 cut(s)	161, 325, 459, 544, 727, 886, 1166, 1257, 1355
BseMI	GCAATG	1 cut(s)	778
BseMII	CTCAG	6 cut(s)	102, 299, 402, 408, 436, 617
BseNI	ACTGG	6 cut(s)	528, 538, 880, 926, 1179, 1349
BseRI	GAGGAG	6 cut(s)	4, 7, 10, 13, 16, 308
BseXI	GCAGC	4 cut(s)	241, 343, 744, 747
BseYI	CCCAGC	1 cut(s)	1449
BshFI	GGCC	7 cut(s)	165, 210, 588, 856, 908, 1250, 1261
BshTI	ACCGGT	1 cut(s)	258
BshVI	ATCGAT	1 cut(s)	1155
BsiHKAI	GWGCWC	2 cut(s)	89, 417
BsiSI	CCGG	6 cut(s)	259, 405, 704, 721, 852, 905
BslFI	GGGAC	3 cut(s)	682, 811, 1331
BslI	CCNNNNNNNGG	9 cut(s)	161, 325, 459, 544, 727, 886, 1166, 1257, 1355
BsmAI	GTCTC	7 cut(s)	41, 137, 242, 345, 397, 667, 930
BsmBI	CGTCTC	4 cut(s)	137, 242, 345, 667
BsmFI	GGGAC	3 cut(s)	682, 811, 1331
BsmI	GAATGC	1 cut(s)	1106
BsnI	GGCC	7 cut(s)	165, 210, 588, 856, 908, 1250, 1261
Bso31I	GGTCTC	1 cut(s)	930
Bsp1286I	GDGCHC	2 cut(s)	89, 417
Bsp13I	TCCGGA	1 cut(s)	720
Bsp143I	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
Bsp1720I	GCTNAGC	1 cut(s)	88
BspACI	CCGC	6 cut(s)	162, 335, 608, 1013, 1327, 1330
BspANI	GGCC	7 cut(s)	165, 210, 588, 856, 908, 1250, 1261
BspCNI	CTCAG	6 cut(s)	101, 298, 403, 407, 435, 616
BspDI	ATCGAT	1 cut(s)	1155
BspEI	TCCGGA	1 cut(s)	720
BspHI	TCATGA	1 cut(s)	1336
BspLI	GGNNCC	5 cut(s)	211, 306, 697, 698, 909
BspMAI	CTGCAG	1 cut(s)	231
BspMI	ACCTGC	1 cut(s)	466
BspPI	GGATC	6 cut(s)	623, 629, 723, 1151, 1318, 1493
BspTNI	GGTCTC	1 cut(s)	930
BsrDI	GCAATG	1 cut(s)	778
BsrFI	RCCGGY	2 cut(s)	258, 904
BsrI	ACTGG	6 cut(s)	528, 538, 880, 926, 1179, 1349
BssAI	RCCGGY	2 cut(s)	258, 904
BssECI	CCNNGG	4 cut(s)	323, 324, 589, 1262
BssMI	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
BssNAI	GTATAC	1 cut(s)	1192
BssNI	GRCGYC	3 cut(s)	573, 660, 860
BssSI	CACGAG	1 cut(s)	245
Bst1107I	GTATAC	1 cut(s)	1192
Bst2BI	CACGAG	1 cut(s)	245
Bst2UI	CCWGG	5 cut(s)	325, 545, 1161, 1263, 1446
Bst4CI	ACNGT	4 cut(s)	100, 131, 1187, 1303
Bst6I	CTCTTC	4 cut(s)	46, 51, 488, 653
BstACI	GRCGYC	3 cut(s)	573, 660, 860
BstDEI	CTNAG	7 cut(s)	88, 285, 394, 411, 422, 603, 1506
BstEII	GGTNACC	1 cut(s)	953
BstF5I	GGATG	2 cut(s)	787, 1501
BstKTI	GATC	8 cut(s)	618, 637, 672, 718, 1042, 1159, 1326, 1501
BstMAI	GTCTC	7 cut(s)	41, 137, 242, 345, 397, 667, 930
BstMBI	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
BstMWI	GCNNNNNNNGC	2 cut(s)	250, 1467
BstNI	CCWGG	5 cut(s)	325, 545, 1161, 1263, 1446
BstPI	GGTNACC	1 cut(s)	953
BstSCI	CCNGG	7 cut(s)	323, 543, 702, 851, 1159, 1261, 1444
BstSFI	CTRYAG	1 cut(s)	227
BstV1I	GCAGC	4 cut(s)	241, 343, 744, 747
BstV2I	GAAGAC	3 cut(s)	167, 377, 984
BstX2I	RGATCY	2 cut(s)	715, 1323
BstYI	RGATCY	2 cut(s)	715, 1323
BstZ17I	GTATAC	1 cut(s)	1192
Bsu15I	ATCGAT	1 cut(s)	1155
BsuRI	GGCC	7 cut(s)	165, 210, 588, 856, 908, 1250, 1261
BsuTUI	ATCGAT	1 cut(s)	1155
BtsCI	GGATG	2 cut(s)	787, 1501
BtsI	GCAGTG	1 cut(s)	1430
BtsIMutI	CAGTG	2 cut(s)	681, 1430
BveI	ACCTGC	1 cut(s)	466
CaiI	CAGNNNCTG	3 cut(s)	544, 1268, 1445
CciI	TCATGA	1 cut(s)	1336
Cfr10I	RCCGGY	2 cut(s)	258, 904
Cfr13I	GGNCC	9 cut(s)	209, 256, 478, 535, 696, 854, 907, 1249, 1442
ClaI	ATCGAT	1 cut(s)	1155
CseI	GACGC	3 cut(s)	259, 581, 868
Csp6I	GTAC	7 cut(s)	400, 541, 583, 691, 883, 1141, 1437
CspAI	ACCGGT	1 cut(s)	258
CviAII	CATG	7 cut(s)	712, 778, 1045, 1135, 1308, 1337, 1372
CviQI	GTAC	7 cut(s)	400, 541, 583, 691, 883, 1141, 1437
DdeI	CTNAG	7 cut(s)	88, 285, 394, 411, 422, 603, 1506
DpnI	GATC	8 cut(s)	617, 636, 671, 717, 1041, 1158, 1325, 1500
DpnII	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
DrdI	GACNNNNNNGTC	1 cut(s)	476
DseDI	GACNNNNNNGTC	1 cut(s)	476
EaeI	YGGCCR	1 cut(s)	1259
Eam1104I	CTCTTC	4 cut(s)	46, 51, 488, 653
EarI	CTCTTC	4 cut(s)	46, 51, 488, 653
EciI	GGCGGA	1 cut(s)	1316
Ecl136II	GAGCTC	2 cut(s)	87, 415
Eco24I	GRGCYC	2 cut(s)	89, 417
Eco31I	GGTCTC	1 cut(s)	930
Eco32I	GATATC	2 cut(s)	217, 552
Eco47I	GGWCC	5 cut(s)	256, 478, 535, 696, 1442
Eco53kI	GAGCTC	2 cut(s)	87, 415
Eco91I	GGTNACC	1 cut(s)	953
EcoICRI	GAGCTC	2 cut(s)	87, 415
EcoO109I	RGGNCCY	3 cut(s)	478, 696, 1442
EcoO65I	GGTNACC	1 cut(s)	953
EcoRII	CCWGG	5 cut(s)	323, 543, 1159, 1261, 1444
EcoRV	GATATC	2 cut(s)	217, 552
EcoT38I	GRGCYC	2 cut(s)	89, 417
Esp3I	CGTCTC	4 cut(s)	137, 242, 345, 667
FaeI	CATG	7 cut(s)	715, 781, 1048, 1138, 1311, 1340, 1375
FaqI	GGGAC	3 cut(s)	682, 811, 1331
FatI	CATG	7 cut(s)	711, 777, 1044, 1134, 1307, 1336, 1371
FauI	CCCGC	1 cut(s)	1020
FauNDI	CATATG	1 cut(s)	514
FbaI	TGATCA	1 cut(s)	1039
FblI	GTMKAC	2 cut(s)	876, 1191
Fnu4HI	GCNGC	8 cut(s)	163, 230, 332, 335, 608, 733, 761, 1330
FokI	GGATG	1 cut(s)	794
FriOI	GRGCYC	2 cut(s)	89, 417
Fsp4HI	GCNGC	8 cut(s)	163, 230, 332, 335, 608, 733, 761, 1330
FspBI	CTAG	3 cut(s)	53, 1016, 1112
GluI	GCNGC	8 cut(s)	163, 230, 332, 335, 608, 733, 761, 1330
GsaI	CCCAGC	1 cut(s)	1453
GsuI	CTGGAG	2 cut(s)	164, 566
HaeIII	GGCC	7 cut(s)	165, 210, 588, 856, 908, 1250, 1261
HapII	CCGG	6 cut(s)	259, 405, 704, 721, 852, 905
HgaI	GACGC	3 cut(s)	259, 581, 868
Hin1I	GRCGYC	3 cut(s)	573, 660, 860
Hin1II	CATG	7 cut(s)	715, 781, 1048, 1138, 1311, 1340, 1375
HincII	GTYRAC	2 cut(s)	103, 877
HindII	GTYRAC	2 cut(s)	103, 877
HindIII	AAGCTT	1 cut(s)	1380
HinfI	GANTC	3 cut(s)	267, 500, 933
HpaI	GTTAAC	1 cut(s)	103
HpaII	CCGG	6 cut(s)	259, 405, 704, 721, 852, 905
HphI	GGTGA	5 cut(s)	643, 799, 1057, 1247, 1328
Hpy166II	GTNNAC	8 cut(s)	103, 271, 709, 877, 885, 1192, 1238, 1273
Hpy188I	TCNGA	9 cut(s)	288, 345, 397, 412, 436, 469, 499, 593, 1431
Hpy188III	TCNNGA	3 cut(s)	457, 721, 1337
Hpy8I	GTNNAC	8 cut(s)	103, 271, 709, 877, 885, 1192, 1238, 1273
Hpy99I	CGWCG	4 cut(s)	473, 662, 862, 1435
HpyAV	CCTTC	2 cut(s)	176, 562
HpyCH4III	ACNGT	4 cut(s)	100, 131, 1187, 1303
HpyCH4IV	ACGT	2 cut(s)	660, 981
HpyCH4V	TGCA	4 cut(s)	229, 945, 1407, 1470
HpyF10VI	GCNNNNNNNGC	2 cut(s)	250, 1467
HpyF3I	CTNAG	7 cut(s)	88, 285, 394, 411, 422, 603, 1506
HpySE526I	ACGT	2 cut(s)	660, 981
Hsp92I	GRCGYC	3 cut(s)	573, 660, 860
Hsp92II	CATG	7 cut(s)	715, 781, 1048, 1138, 1311, 1340, 1375
KflI	GGGWCCC	1 cut(s)	696
Kpn2I	TCCGGA	1 cut(s)	720
Ksp22I	TGATCA	1 cut(s)	1039
KspAI	GTTAAC	1 cut(s)	103
Kzo9I	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
LmnI	GCTCC	3 cut(s)	328, 431, 500
Lsp1109I	GCAGC	4 cut(s)	241, 343, 744, 747
LweI	GCATC	2 cut(s)	271, 903
MaeI	CTAG	3 cut(s)	53, 1016, 1112
MaeII	ACGT	2 cut(s)	660, 981
MaeIII	GTNAC	2 cut(s)	953, 1181
MalI	GATC	8 cut(s)	617, 636, 671, 717, 1041, 1158, 1325, 1500
MboI	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
MflI	RGATCY	2 cut(s)	715, 1323
MhlI	GDGCHC	2 cut(s)	89, 417
MlsI	TGGCCA	1 cut(s)	1261
MluCI	AATT	4 cut(s)	487, 1164, 1387, 1410
MluNI	TGGCCA	1 cut(s)	1261
MlyI	GAGTC	1 cut(s)	276
MmeI	TCCRAC	3 cut(s)	459, 492, 1454
Mox20I	TGGCCA	1 cut(s)	1261
MroI	TCCGGA	1 cut(s)	720
MscI	TGGCCA	1 cut(s)	1261
MseI	TTAA	5 cut(s)	62, 102, 531, 1173, 1224
MslI	CAYNNNNRTG	1 cut(s)	782
Msp20I	TGGCCA	1 cut(s)	1261
MspA1I	CMGCKG	1 cut(s)	92
MspI	CCGG	6 cut(s)	259, 405, 704, 721, 852, 905
MspR9I	CCNGG	7 cut(s)	325, 545, 704, 853, 1161, 1263, 1446
Mva1269I	GAATGC	1 cut(s)	1106
MvaI	CCWGG	5 cut(s)	325, 545, 1161, 1263, 1446
MwoI	GCNNNNNNNGC	2 cut(s)	250, 1467
NciI	CCSGG	2 cut(s)	704, 853
NdeI	CATATG	1 cut(s)	514
NdeII	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
NlaIII	CATG	7 cut(s)	715, 781, 1048, 1138, 1311, 1340, 1375
NlaIV	GGNNCC	5 cut(s)	211, 306, 697, 698, 909
NmeAIII	GCCGAG	1 cut(s)	644
PagI	TCATGA	1 cut(s)	1336
PasI	CCCWGGG	1 cut(s)	324
PctI	GAATGC	1 cut(s)	1106
PfeI	GAWTC	2 cut(s)	500, 933
PflMI	CCANNNNNTGG	2 cut(s)	544, 1355
PfoI	TCCNGGA	1 cut(s)	1159
PinAI	ACCGGT	1 cut(s)	258
PkrI	GCNGC	8 cut(s)	164, 231, 333, 336, 609, 734, 762, 1331
PleI	GAGTC	1 cut(s)	275
PpsI	GAGTC	1 cut(s)	275
PpuMI	RGGWCCY	3 cut(s)	478, 696, 1442
Psp124BI	GAGCTC	2 cut(s)	89, 417
Psp5II	RGGWCCY	3 cut(s)	478, 696, 1442
Psp6I	CCWGG	5 cut(s)	323, 543, 1159, 1261, 1444
PspEI	GGTNACC	1 cut(s)	953
PspFI	CCCAGC	1 cut(s)	1449
PspGI	CCWGG	5 cut(s)	323, 543, 1159, 1261, 1444
PspN4I	GGNNCC	5 cut(s)	211, 306, 697, 698, 909
PspPI	GGNCC	9 cut(s)	209, 256, 478, 535, 696, 854, 907, 1249, 1442
PspPPI	RGGWCCY	3 cut(s)	478, 696, 1442
PsrI	GAACNNNNNNTAC	4 cut(s)	623, 655, 875, 907
PstI	CTGCAG	1 cut(s)	231
PstNI	CAGNNNCTG	3 cut(s)	544, 1268, 1445
PsuI	RGATCY	2 cut(s)	715, 1323
PvuII	CAGCTG	1 cut(s)	92
RsaI	GTAC	7 cut(s)	401, 542, 584, 692, 884, 1142, 1438
RsaNI	GTAC	7 cut(s)	400, 541, 583, 691, 883, 1141, 1437
RseI	CAYNNNNRTG	1 cut(s)	782
SacI	GAGCTC	2 cut(s)	89, 417
SalI	GTCGAC	1 cut(s)	875
SaqAI	TTAA	5 cut(s)	62, 102, 531, 1173, 1224
SatI	GCNGC	8 cut(s)	163, 230, 332, 335, 608, 733, 761, 1330
Sau3AI	GATC	8 cut(s)	615, 634, 669, 715, 1039, 1156, 1323, 1498
Sau96I	GGNCC	9 cut(s)	209, 256, 478, 535, 696, 854, 907, 1249, 1442
ScaI	AGTACT	1 cut(s)	401
SchI	GAGTC	1 cut(s)	276
ScrFI	CCNGG	7 cut(s)	325, 545, 704, 853, 1161, 1263, 1446
SduI	GDGCHC	2 cut(s)	89, 417
SfaNI	GCATC	2 cut(s)	271, 903
SfcI	CTRYAG	1 cut(s)	227
SinI	GGWCC	5 cut(s)	256, 478, 535, 696, 1442
SmiMI	CAYNNNNRTG	1 cut(s)	782
Sse9I	AATT	4 cut(s)	487, 1164, 1387, 1410
SsiI	CCGC	6 cut(s)	162, 335, 608, 1013, 1327, 1330
SspMI	CTAG	3 cut(s)	53, 1016, 1112
SstI	GAGCTC	2 cut(s)	89, 417
StyD4I	CCNGG	7 cut(s)	323, 543, 702, 851, 1159, 1261, 1444
TaaI	ACNGT	4 cut(s)	100, 131, 1187, 1303
TaiI	ACGT	2 cut(s)	663, 984
TaqI	TCGA	5 cut(s)	144, 387, 834, 876, 1155
TasI	AATT	4 cut(s)	487, 1164, 1387, 1410
TatI	WGTACW	3 cut(s)	399, 882, 1140
TauI	GCSGC	4 cut(s)	165, 337, 610, 1332
TfiI	GAWTC	2 cut(s)	500, 933
Tru1I	TTAA	5 cut(s)	62, 102, 531, 1173, 1224
Tru9I	TTAA	5 cut(s)	62, 102, 531, 1173, 1224
TscAI	CASTG	2 cut(s)	688, 1430
TseI	GCWGC	4 cut(s)	229, 331, 732, 760
TspDTI	ATGAA	7 cut(s)	883, 1151, 1210, 1296, 1325, 1353, 1388
TspGWI	ACGGA	1 cut(s)	1065
TspRI	CASTG	2 cut(s)	688, 1430
Van91I	CCANNNNNTGG	2 cut(s)	544, 1355
VpaK11BI	GGWCC	5 cut(s)	256, 478, 535, 696, 1442
XapI	RAATTY	2 cut(s)	1387, 1410
XmiI	GTMKAC	2 cut(s)	876, 1191
XspI	CTAG	3 cut(s)	53, 1016, 1112
ZraI	GACGTC	1 cut(s)	661
ZrmI	AGTACT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.