Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002021

Physical Location & Seq

Genomic Coordinates Forward (+)

8545025 .. 8548086

Gene Structure 3062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14950.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

ATGGGATCGGCTGGTGTAGCGAGTTCTTCTTCTGATGTTGCGATCTCAGCTTTGCGTGAGAAGCATGAGAAGGAAGTAGAGAATCTAACATTAACGACACAACCTTTGAATACATTGAAGTTGTTTGTTGAGGCTACTATTCAGTACATCAAGCGATCCATATCGTATCTATTGGCTCATGGAGGTTGGTTTATACTGATAACCACTTTGTTAGTGGTATCTGGTGGTTTGCTTGTTACTGTTGATGGACCTCATGGCAAGCATGTTGAAGAAGTATTAGAGTATGTCCGATATGGCTTGTGGTGGATAGCACTTGGTGTTGCATCTTCTATTGGTCTTGGATCTGGTCTCCATACTTTCGTTCTCTATTTGGGTCCGCACATTGCTTTGTTCACTCTAAAAGCAACGCTATGTGGTCGAGTTGATCTAAAATCTGCACCATATGATACAATACAGTTGAAAAGGGTTCCTTCATGGCTTGATAAATCTTGTTCGGAATTCGGTCCTCCTTTAATGATATCAGCTGCTGGATCGCGTGTGCCTCTTACCAGCATATTGCCACAAGTCCAGTTGGAGGCAATCTTATGGGGTATTGGGACGGCTCTTGGGGAGCTTCCTCCATATTTCATCTCAAGGGCAGCTAGTATATCTGGGAGCACAGTGGATGGAATGGAAGAATTAGATGGTTCCTCCACTGAAGATAGCGGATTTATGGCAACTCACCTGAACCGTGTTAAGCGTTGGTTATTAACCCATTCACAGCACTTGAACTTCTTCACTGTCTTGGTTCTTGCTTCGGTTCCAAATCCTTTGTTTGACCTCGCTGGAATAATGTGTGGACAATTTGGCATTCCGTTTTGGGAATTCTTCCTGGCGACCTTAATCGGAAAGGCGATCATCAAAACTCATATACAGACGATATTTATCATCTGCGTTTGTAATAACCAACTGCTTGACTGGATGGAGAACGAACTGATCTGGATACTTAGCCATGTCCCGGGATTGGCTTCTATGTTGCCTGGACTCACAGCCAAACTCCACGCCATGAAAGAAAAGTATATTGATGCACCATCTCCTGTTCCATCTCACATCAAGGTGAAAAAGTGGGATTTTTCGTTTGCATCGATCTGGAACGGGATAGTATGGCTCATGCTCCTCAACTTTTTCGTGAAGATTGTGACAGCAACTGCACAGAGACACTTGAAGAAGAAGCAAGAGAAAGAAATGGCTACTTTGACTCATTCAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000407 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0006887 GO:0006996 GO:0007029 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0031984 GO:0032940 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046903 GO:0051179 GO:0051234 GO:0071840 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko04140 map04140

Pfam Domains

Protein Families

SNARE_assoc

Protein Analysis

416

Amino Acids

45.85

Weight (kDa)

7.26

Isoelectric Point (pI)

34.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VTT_dom	PF09335	188 - 289	1.8e-07	VTT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002021)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05360 AT1G05360 AT4G14950 AT4G14950 AT4G14950
fragaria_vesca	FvH4_4g15240 FvH4_4g15240 FvH4_4g15240 FvH4_4g15240 FvH4_6g06030 FvH4_6g06030
malus_domestica	MD04G1204700.v1.1 MD12G1218400.v1.1 MD13G1190900.v1.1 MD16G1191100.v1.1
prunus_persica	Prupe.1G011300_v2.0.a1 Prupe.1G011300_v2.0.a1 Prupe.6G324700_v2.0.a1 Prupe.6G324700_v2.0.a1 Prupe.6G324700_v2.0.a1
pyrus_communis	pycom04g18090 pycom12g20400 pycom16g16070
rosa_chinensis	RchiOBHm_Chr3g0454991 RchiOBHm_Chr4g0400671 RchiOBHm_Chr4g0416611
rosa_laevigata	RLG00000007967 RLG00000025395
rosa_multiflora	Rmu_sc0001861.1_g000059 Rmu_sc0003722.1_g000053 Rmu_sc0028514.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360490 Rroxscaffold_6G00424620
rosa_rugosa	Rorug03G0003800 Rorug04G0143300.1
rosa_samantha	Rh3AG063400 Rh3BG065100 Rh3CG064200 Rh3DG065400 Rh4AG205700 Rh4BG203200 Rh4CG216600 Rh4DG202700
rosa_wichuraiana	Rw3G004980 Rw4G017410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	535
AciI	CCGC	2 cut(s)	377, 705
AclWI	GGATC	4 cut(s)	13, 150, 349, 538
AcsI	RAATTY	2 cut(s)	497, 863
AcuI	CTGAAG	1 cut(s)	717
AdeI	CACNNNGTG	1 cut(s)	317
AfaI	GTAC	1 cut(s)	146
AfiI	CCNNNNNNNGG	3 cut(s)	574, 997, 1003
AgsI	TTSAA	6 cut(s)	109, 118, 269, 460, 769, 1204
AjnI	CCWGG	2 cut(s)	870, 1018
AluBI	AGCT	4 cut(s)	50, 524, 613, 641
AluI	AGCT	4 cut(s)	50, 524, 613, 641
Alw21I	GWGCWC	1 cut(s)	659
Alw26I	GTCTC	2 cut(s)	353, 1189
AlwI	GGATC	4 cut(s)	13, 150, 349, 538
AlwNI	CAGNNNCTG	2 cut(s)	527, 1187
Ama87I	CYCGRG	1 cut(s)	997
ApeKI	GCWGC	2 cut(s)	524, 638
ApoI	RAATTY	2 cut(s)	497, 863
ArsI	GACNNNNNNTTYG	2 cut(s)	88, 120
Asp700I	GAANNNNTTC	1 cut(s)	773
AspS9I	GGNCC	3 cut(s)	248, 374, 503
AsuC2I	CCSGG	2 cut(s)	998, 999
AsuHPI	GGTGA	2 cut(s)	713, 1108
AvaI	CYCGRG	1 cut(s)	997
AvaII	GGWCC	3 cut(s)	248, 374, 503
Bbv12I	GWGCWC	1 cut(s)	659
BbvI	GCAGC	2 cut(s)	511, 650
BccI	CCATC	6 cut(s)	239, 659, 677, 955, 1078, 1090
BceAI	ACGGC	1 cut(s)	615
BciT130I	CCWGG	2 cut(s)	872, 1020
BciVI	GTATCC	1 cut(s)	975
BcnI	CCSGG	2 cut(s)	998, 999
BcoDI	GTCTC	2 cut(s)	353, 1189
BfaI	CTAG	1 cut(s)	642
BfuI	GTATCC	1 cut(s)	975
BisI	GCNGC	2 cut(s)	525, 639
BlsI	GCNGC	2 cut(s)	526, 640
Bme1390I	CCNGG	4 cut(s)	872, 998, 999, 1020
Bme18I	GGWCC	3 cut(s)	248, 374, 503
BmeT110I	CYCGRG	1 cut(s)	997
BmgT120I	GGNCC	3 cut(s)	248, 374, 503
BmiI	GGNNCC	4 cut(s)	375, 468, 688, 801
BmrFI	CCNGG	4 cut(s)	872, 998, 999, 1020
BmsI	GCATC	3 cut(s)	332, 1054, 1130
BpuEI	CTTGAG	1 cut(s)	616
BpuMI	CCSGG	2 cut(s)	998, 999
Bsa29I	ATCGAT	1 cut(s)	1124
BsaBI	GATNNNNATC	2 cut(s)	160, 923
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	1 cut(s)	997
Bsc4I	CCNNNNNNNGG	3 cut(s)	574, 997, 1003
Bse1I	ACTGG	2 cut(s)	568, 962
Bse3DI	GCAATG	1 cut(s)	381
Bse8I	GATNNNNATC	2 cut(s)	160, 923
BseBI	CCWGG	2 cut(s)	872, 1020
BseCI	ATCGAT	1 cut(s)	1124
BseDI	CCNNGG	1 cut(s)	997
BseGI	GGATG	2 cut(s)	670, 966
BseJI	GATNNNNATC	2 cut(s)	160, 923
BseLI	CCNNNNNNNGG	3 cut(s)	574, 997, 1003
BseMI	GCAATG	1 cut(s)	381
BseMII	CTCAG	1 cut(s)	60
BseNI	ACTGG	2 cut(s)	568, 962
BseRI	GAGGAG	1 cut(s)	1145
BseXI	GCAGC	2 cut(s)	511, 650
BsgI	GTGCAG	2 cut(s)	420, 1173
Bsh1236I	CGCG	1 cut(s)	535
BshVI	ATCGAT	1 cut(s)	1124
BsiHKAI	GWGCWC	1 cut(s)	659
BsiHKCI	CYCGRG	1 cut(s)	997
BsiSI	CCGG	1 cut(s)	998
BslFI	GGGAC	2 cut(s)	610, 980
BslI	CCNNNNNNNGG	3 cut(s)	574, 997, 1003
BsmAI	GTCTC	2 cut(s)	353, 1189
BsmFI	GGGAC	2 cut(s)	610, 980
BsmI	GAATGC	1 cut(s)	849
Bso31I	GGTCTC	1 cut(s)	353
BsoBI	CYCGRG	1 cut(s)	997
Bsp1286I	GDGCHC	1 cut(s)	659
Bsp143I	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
BspACI	CCGC	2 cut(s)	377, 705
BspCNI	CTCAG	1 cut(s)	59
BspDI	ATCGAT	1 cut(s)	1124
BspFNI	CGCG	1 cut(s)	535
BspLI	GGNNCC	4 cut(s)	375, 468, 688, 801
BspPI	GGATC	4 cut(s)	13, 150, 349, 538
BspTNI	GGTCTC	1 cut(s)	353
BsrDI	GCAATG	1 cut(s)	381
BsrI	ACTGG	2 cut(s)	568, 962
BssECI	CCNNGG	1 cut(s)	997
BssMI	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
Bst2UI	CCWGG	2 cut(s)	872, 1020
Bst4CI	ACNGT	5 cut(s)	241, 456, 661, 731, 781
BstC8I	GCNNGC	1 cut(s)	260
BstDEI	CTNAG	2 cut(s)	46, 986
BstF5I	GGATG	2 cut(s)	670, 966
BstFNI	CGCG	1 cut(s)	535
BstKTI	GATC	9 cut(s)	8, 45, 158, 344, 427, 533, 897, 978, 1128
BstMAI	GTCTC	2 cut(s)	353, 1189
BstMBI	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
BstMWI	GCNNNNNNNGC	3 cut(s)	17, 47, 61
BstNI	CCWGG	2 cut(s)	872, 1020
BstNSI	RCATGY	1 cut(s)	266
BstSCI	CCNGG	4 cut(s)	870, 996, 997, 1018
BstUI	CGCG	1 cut(s)	535
BstV1I	GCAGC	2 cut(s)	511, 650
BstX2I	RGATCY	1 cut(s)	341
BstYI	RGATCY	1 cut(s)	341
Bsu15I	ATCGAT	1 cut(s)	1124
BsuI	GTATCC	1 cut(s)	975
BsuTUI	ATCGAT	1 cut(s)	1124
BtsCI	GGATG	2 cut(s)	670, 966
BtsIMutI	CAGTG	3 cut(s)	666, 693, 777
Cac8I	GCNNGC	1 cut(s)	260
CaiI	CAGNNNCTG	2 cut(s)	527, 1187
Cfr13I	GGNCC	3 cut(s)	248, 374, 503
Cfr9I	CCCGGG	1 cut(s)	997
ClaI	ATCGAT	1 cut(s)	1124
Csp6I	GTAC	1 cut(s)	145
CviAII	CATG	8 cut(s)	65, 179, 254, 263, 474, 992, 1045, 1150
CviQI	GTAC	1 cut(s)	145
DdeI	CTNAG	2 cut(s)	46, 986
DpnI	GATC	9 cut(s)	7, 44, 157, 343, 426, 532, 896, 977, 1127
DpnII	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
DraIII	CACNNNGTG	1 cut(s)	317
Eco31I	GGTCTC	1 cut(s)	353
Eco32I	GATATC	1 cut(s)	519
Eco47I	GGWCC	3 cut(s)	248, 374, 503
Eco57I	CTGAAG	1 cut(s)	717
Eco88I	CYCGRG	1 cut(s)	997
EcoRI	GAATTC	2 cut(s)	497, 863
EcoRII	CCWGG	2 cut(s)	870, 1018
EcoRV	GATATC	1 cut(s)	519
FaeI	CATG	8 cut(s)	68, 182, 257, 266, 477, 995, 1048, 1153
FalI	AAGNNNNNCTT	2 cut(s)	454, 486
FaqI	GGGAC	2 cut(s)	610, 980
FatI	CATG	8 cut(s)	64, 178, 253, 262, 473, 991, 1044, 1149
FauNDI	CATATG	1 cut(s)	442
Fnu4HI	GCNGC	2 cut(s)	525, 639
FokI	GGATG	2 cut(s)	677, 973
Fsp4HI	GCNGC	2 cut(s)	525, 639
FspBI	CTAG	1 cut(s)	642
GluI	GCNGC	2 cut(s)	525, 639
HapII	CCGG	1 cut(s)	998
Hin1II	CATG	8 cut(s)	68, 182, 257, 266, 477, 995, 1048, 1153
HinfI	GANTC	3 cut(s)	82, 1023, 1237
HpaII	CCGG	1 cut(s)	998
HphI	GGTGA	2 cut(s)	713, 1108
Hpy166II	GTNNAC	2 cut(s)	393, 839
Hpy188I	TCNGA	5 cut(s)	34, 290, 496, 887, 1246
Hpy188III	TCNNGA	3 cut(s)	979, 1129, 1168
Hpy8I	GTNNAC	2 cut(s)	393, 839
HpyAV	CCTTC	2 cut(s)	64, 480
HpyCH4III	ACNGT	5 cut(s)	241, 456, 661, 731, 781
HpyCH4V	TGCA	5 cut(s)	323, 437, 1067, 1121, 1190
HpyF10VI	GCNNNNNNNGC	3 cut(s)	17, 47, 61
HpyF3I	CTNAG	2 cut(s)	46, 986
Hsp92II	CATG	8 cut(s)	68, 182, 257, 266, 477, 995, 1048, 1153
Kzo9I	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
LmnI	GCTCC	3 cut(s)	610, 654, 1158
Lsp1109I	GCAGC	2 cut(s)	511, 650
LweI	GCATC	3 cut(s)	332, 1054, 1130
MaeI	CTAG	1 cut(s)	642
MaeIII	GTNAC	2 cut(s)	235, 1177
MalI	GATC	9 cut(s)	7, 44, 157, 343, 426, 532, 896, 977, 1127
MboI	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
MflI	RGATCY	1 cut(s)	341
MhlI	GDGCHC	1 cut(s)	659
MluCI	AATT	4 cut(s)	497, 677, 842, 863
MlyI	GAGTC	2 cut(s)	1017, 1231
MmeI	TCCRAC	1 cut(s)	552
MroXI	GAANNNNTTC	1 cut(s)	773
MseI	TTAA	5 cut(s)	92, 512, 735, 749, 881
MslI	CAYNNNNRTG	1 cut(s)	1094
MspA1I	CMGCKG	1 cut(s)	524
MspI	CCGG	1 cut(s)	998
MspR9I	CCNGG	4 cut(s)	872, 998, 999, 1020
Mva1269I	GAATGC	1 cut(s)	849
MvaI	CCWGG	2 cut(s)	872, 1020
MvnI	CGCG	1 cut(s)	535
MwoI	GCNNNNNNNGC	3 cut(s)	17, 47, 61
NciI	CCSGG	2 cut(s)	998, 999
NdeI	CATATG	1 cut(s)	442
NdeII	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
NlaIII	CATG	8 cut(s)	68, 182, 257, 266, 477, 995, 1048, 1153
NlaIV	GGNNCC	4 cut(s)	375, 468, 688, 801
NmuCI	GTSAC	1 cut(s)	1177
NspI	RCATGY	1 cut(s)	266
PcsI	WCGNNNNNNNCGW	1 cut(s)	1121
PctI	GAATGC	1 cut(s)	849
PdmI	GAANNNNTTC	1 cut(s)	773
PfeI	GAWTC	1 cut(s)	82
PkrI	GCNGC	2 cut(s)	526, 640
PleI	GAGTC	2 cut(s)	1017, 1231
PpsI	GAGTC	2 cut(s)	1017, 1231
Psp6I	CCWGG	2 cut(s)	870, 1018
PspGI	CCWGG	2 cut(s)	870, 1018
PspN4I	GGNNCC	4 cut(s)	375, 468, 688, 801
PspPI	GGNCC	3 cut(s)	248, 374, 503
PstNI	CAGNNNCTG	2 cut(s)	527, 1187
PsuI	RGATCY	1 cut(s)	341
PvuII	CAGCTG	1 cut(s)	524
RsaI	GTAC	1 cut(s)	146
RsaNI	GTAC	1 cut(s)	145
RseI	CAYNNNNRTG	1 cut(s)	1094
SaqAI	TTAA	5 cut(s)	92, 512, 735, 749, 881
SatI	GCNGC	2 cut(s)	525, 639
Sau3AI	GATC	9 cut(s)	5, 42, 155, 341, 424, 530, 894, 975, 1125
Sau96I	GGNCC	3 cut(s)	248, 374, 503
SchI	GAGTC	2 cut(s)	1017, 1231
ScrFI	CCNGG	4 cut(s)	872, 998, 999, 1020
SduI	GDGCHC	1 cut(s)	659
SfaNI	GCATC	3 cut(s)	332, 1054, 1130
SinI	GGWCC	3 cut(s)	248, 374, 503
SmaI	CCCGGG	1 cut(s)	999
SmiMI	CAYNNNNRTG	1 cut(s)	1094
SmlI	CTYRAG	1 cut(s)	631
SmoI	CTYRAG	1 cut(s)	631
Sse9I	AATT	4 cut(s)	497, 677, 842, 863
SsiI	CCGC	2 cut(s)	377, 705
SspMI	CTAG	1 cut(s)	642
StyD4I	CCNGG	4 cut(s)	870, 996, 997, 1018
TaaI	ACNGT	5 cut(s)	241, 456, 661, 731, 781
TaqI	TCGA	2 cut(s)	418, 1124
TaqII	GACCGA	1 cut(s)	491
TasI	AATT	4 cut(s)	497, 677, 842, 863
TatI	WGTACW	1 cut(s)	144
TfiI	GAWTC	1 cut(s)	82
Tru1I	TTAA	5 cut(s)	92, 512, 735, 749, 881
Tru9I	TTAA	5 cut(s)	92, 512, 735, 749, 881
TscAI	CASTG	3 cut(s)	666, 700, 784
TseFI	GTSAC	1 cut(s)	1177
TseI	GCWGC	2 cut(s)	524, 638
Tsp45I	GTSAC	1 cut(s)	1177
TspDTI	ATGAA	3 cut(s)	462, 616, 1061
TspGWI	ACGGA	1 cut(s)	843
TspMI	CCCGGG	1 cut(s)	997
TspRI	CASTG	3 cut(s)	666, 700, 784
VpaK11BI	GGWCC	3 cut(s)	248, 374, 503
XapI	RAATTY	2 cut(s)	497, 863
XceI	RCATGY	1 cut(s)	266
XcmI	CCANNNNNNNNNTGG	1 cut(s)	211
XmaI	CCCGGG	1 cut(s)	997
XmnI	GAANNNNTTC	1 cut(s)	773
XspI	CTAG	1 cut(s)	642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.