AT4G19130

Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0009053
Physical Location & Seq
Reverse (-)
10466407 .. 10469329
2923 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G19130.2

Sequence Viewer

Length: 2355 bp
ATGGAGGTAAGTTTGACGGCGGGAGCAATCGGGAAGATAATGAATGGAGAAGTGACGACTGAAGCAGATATGATTCCGGTGTTGCAAGTGACGGATTTGAAGCAGATTATGGCTCAACAAGATCCAACAAGAGAGAGGTTTAGGATGGTGTTATCTGATGGGACATACTTGCATCAAGGAATGCTAGGAACTGATCTCAACAATCTTGTCAAAGAAGGGACTCTTCAACCCGGTTCTATTGTTAGACTTACTCGTTTCGTCGGTGATGTCATCAAGGGTCGAAGGATTGTTATTGTTCCGCAACTGGAGGTGTTAAAACAGATTTCTGATATTATCGGGCATCCTGTTCCAGGAGGAAAGCATAATGATCAACGTGGAGCAGATTCTGGTATTAAGTTTAATACAACTGAGCAACAAGGTAGTGGTATCCGTCAAGTAAACAATATCGAGCCAGGGAGAAGTAATGCAGCTATTTCACCTCAGGTTGGTGGTACTGGTTCTAGTGTTCCTGCATCAACAACACCTTCCACTCGGGCATACAGCAATCCGTCTTCAGGTAATGGAGTCACTAGGCAGGACTATGCTCGTGATCCTCCAACAAGTTATCCTCATCAGCCTCAACCACCACCACCGATGTATGCAAACAGGGGACCAGTGGCTAGGAATGAAGCACCTCCTAAGATAATTCCAGTTAATGCTCTTAGTCCATATTCAGGTAGGTGGACCATCAAGGCCAGAGTCACGAATAAAGCAGCACTTAAGCAATACAGTAATCCCCGTGGGGAAGGGAAAGTGTTCAACTTTGATCTTCTTGATGCTGATGGCGGAGAAATACGTGTTACTTGTTTTAACGCTGTGGCTGATCAATTCTATGACCAGATTGTTGTTGGTAATCTTTATCTTATCTCGAGGGGAAGTTTGCGGCCTGCACAAAAGAACTTTAATCATCTTCGAAATGATTACGAGATCATGCTGGATAATGCATCAACTATAAAACAATGCTATGAAGAGGATGCTGCAATTCCGCGCCATCAGTTCCATTTCCGTACCATTGGGGATATTGAGAGCATGGAGAATAACTGCATCGTTGATGTAATTGGTATTGTGTCATCTATCAGTCCTACTGTAACAATAACGAGGAAAAACGGAACTGCAACACCGAAAAGATCACTTCAGTTGAAGGATATGTCAGGCCGAAGTGTTGAGGTAACTATGTGGGGTGACTTCTGCAATGCAGAAGGACAAAGGCTGCAAAGTCTTTGTGATTCTGGTGTGTTTCCGGTTCTTGCTGTTAAGGCGGGCAGGATTAGTGAATTTAATGGAAAGACAGTGAGCACCATTGGATCAAGTCAGCTGTTCATTGACCCAGATTTTGTTGAAGCTGAGAAACTGAAGAACTGGTTTGAGAGAGAAGGAAAGAGTGTCCCTTGTATCTCCTTATCTCGGGAGTTTTCCGGCAGTGGCAAAGTAGATGTTCGTAAGACAATATCTCAAATTAAAGATGAGAAACTAGGAACCTCCGAAAAACCAGACTGGATCACAGTCAGTGCCACAATTTTATACTTGAAGTTTGATAACTTCTGCTACACAGCTTGTCCTATCATGAACGGTGATCGTCCATGCAGCAAAAAGGTAACAGACAATGGAGATGGGACATGGCGGTGCGAAAAGTGTGATAAAAGCGTTGATGAATGTGACTACAGGTATATACTGCAGCTTCAGATACAGGACCATACAGATCTTACTTGCGTCACAGCATTCCAGGAGGCTGGTGAAGAGATAATGGGCATATCTGCTAAAGATTTGTATTATGTGAAGAATGAACACAAGGATGAGGAAAAATTCGAAGATATCATCCGTAAGGTTGCTTTTACCAAGTACAACTTCAAGCTGAAGGTAAAAGAAGAAACATTCAGCGACGAACAGCGTGTGAAAGCAACAGTTGTGAAAGTGGACAAGCTAAACTATTCAGCAGATACCAGGACTATGTTAGGTGCTATGGATAAACTCAGGACCAGAGATGCAAATTCTCTTCCCATTAACCCAGAAGGATCCGATTACAATGCTGATGTGGTTAATACTGGTATAGGAAGCTCAGGAACCAGAGATCCCTCATCGGTCCAAAGAAGGGATTTCGGTTTACATGCGCATCAATCGGGTCAATCTGGGAATCACTATAGTGGTGGTGGTGCTACTACTAGCTGCAATGTCTGTGGAAACAGTGGTCATGTTTCTGCAAAGTGTCCAGGCGCTACTAAGCCGCAAGAGCAAGGGCAGTACATGGGTGGCTCTTACAGAGGCACGACGGGGAGTTATGGAGGAGGACTACCGAGACAACATGTTGGAAGCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03030 ko03420 ko03430 ko03440 ko03460 map03030 map03420 map03430 map03440 map03460
Pfam Domains
Protein Families
REPA_OB_2 Rep-A_N Rep_fac-A_C tRNA_anti-codon zf-CCHC

Protein Analysis

784

Amino Acids

85.99

Weight (kDa)

7.79

Isoelectric Point (pI)

34.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rep-A_N PF04057 6 - 108 2.6e-34 Replication factor-A protein 1, N-terminal domain
tRNA_anti-codon PF01336 242 - 327 6.9e-09 OB-fold nucleic acid binding domain
REPA_OB_2 PF16900 352 - 456 1.1e-28 Replication protein A OB domain
Rep_fac-A_C PF08646 513 - 663 3.6e-53 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2148
AccII CGCG 1 cut(s) 1027
AciI CCGC 8 cut(s) 20, 299, 825, 922, 1025, 1298, 1660, 2261
AclWI GGATC 7 cut(s) 116, 584, 1351, 1544, 2046, 2059, 2102
AcsI RAATTY 3 cut(s) 1313, 1841, 2026
AcuI CTGAAG 6 cut(s) 81, 537, 1157, 1412, 1703, 1913
AfaI GTAC 4 cut(s) 493, 1048, 1880, 2279
AfiI CCNNNNNNNGG 6 cut(s) 350, 485, 554, 713, 1443, 2128
AflII CTTAAG 1 cut(s) 758
AflIII ACRYGT 2 cut(s) 835, 2338
AgsI TTSAA 7 cut(s) 100, 227, 799, 1180, 1379, 1567, 1888
AjnI CCWGG 5 cut(s) 349, 451, 1761, 1979, 2245
AjuI GAANNNNNNNTTGG 2 cut(s) 1868, 1900
AleI CACNNNNGTG 1 cut(s) 2178
AloI GAACNNNNNNTCC 2 cut(s) 2092, 2124
Alw21I GWGCWC 1 cut(s) 1337
Alw26I GTCTC 1 cut(s) 2326
AlwI GGATC 7 cut(s) 116, 584, 1351, 1544, 2046, 2059, 2102
AlwNI CAGNNNCTG 1 cut(s) 386
Ama87I CYCGRG 3 cut(s) 531, 907, 1443
AoxI GGCC 3 cut(s) 732, 923, 1192
ApeKI GCWGC 7 cut(s) 467, 752, 1016, 1249, 1623, 1714, 2202
ApoI RAATTY 3 cut(s) 1313, 1841, 2026
ArsI GACNNNNNNTTYG 2 cut(s) 1355, 1387
Asp700I GAANNNNTTC 1 cut(s) 794
AspLEI GCGC 3 cut(s) 1029, 2149, 2252
AspS9I GGNCC 5 cut(s) 650, 723, 1729, 2013, 2119
AsuC2I CCSGG 1 cut(s) 231
AsuHPI GGTGA 5 cut(s) 275, 468, 1232, 1622, 1784
AsuII TTCGAA 2 cut(s) 952, 1845
AvaI CYCGRG 3 cut(s) 531, 907, 1443
AvaII GGWCC 5 cut(s) 650, 723, 1729, 2013, 2119
AxyI CCTNAGG 1 cut(s) 480
BamHI GGATCC 1 cut(s) 2051
BauI CACGAG 1 cut(s) 585
BbsI GAAGAC 1 cut(s) 543
Bbv12I GWGCWC 1 cut(s) 1337
BbvI GCAGC 7 cut(s) 479, 764, 1003, 1236, 1635, 1726, 2189
BccI CCATC 6 cut(s) 139, 152, 734, 815, 1038, 1643
BceAI ACGGC 1 cut(s) 33
BcgI CGANNNNNNTGC 2 cut(s) 2045, 2079
BciT130I CCWGG 5 cut(s) 351, 453, 1763, 1981, 2247
BciVI GTATCC 1 cut(s) 437
BclI TGATCA 2 cut(s) 367, 862
BcnI CCSGG 1 cut(s) 231
BcoDI GTCTC 1 cut(s) 2326
BfaI CTAG 6 cut(s) 185, 501, 570, 660, 1511, 2199
BfmI CTRYAG 3 cut(s) 1699, 1712, 2176
BfoI RGCGCY 1 cut(s) 2253
BfrI CTTAAG 1 cut(s) 758
BfuI GTATCC 1 cut(s) 437
BglII AGATCT 1 cut(s) 1738
BisI GCNGC 9 cut(s) 468, 753, 923, 1017, 1250, 1624, 1715, 2203, 2261
BlsI GCNGC 9 cut(s) 469, 754, 924, 1018, 1251, 1625, 1716, 2204, 2262
Bme1390I CCNGG 6 cut(s) 231, 351, 453, 1763, 1981, 2247
Bme18I GGWCC 5 cut(s) 650, 723, 1729, 2013, 2119
BmeT110I CYCGRG 3 cut(s) 531, 907, 1443
BmgT120I GGNCC 5 cut(s) 650, 723, 1729, 2013, 2119
BmiI GGNNCC 4 cut(s) 651, 1516, 2053, 2101
BmrFI CCNGG 6 cut(s) 231, 351, 453, 1763, 1981, 2247
BmsI GCATC 9 cut(s) 181, 349, 521, 805, 992, 1003, 1092, 2011, 2158
BpiI GAAGAC 1 cut(s) 543
BpmI CTGGAG 1 cut(s) 326
Bpu10I CCTNAGC 1 cut(s) 2095
Bpu14I TTCGAA 2 cut(s) 952, 1845
BpuMI CCSGG 1 cut(s) 231
BsaAI YACGTR 1 cut(s) 836
BsaJI CCNNGG 2 cut(s) 452, 778
BsaWI WCCGGW 2 cut(s) 76, 1279
Bsc4I CCNNNNNNNGG 6 cut(s) 350, 485, 554, 713, 1443, 2128
Bse1I ACTGG 7 cut(s) 309, 499, 653, 689, 1403, 1538, 2086
Bse21I CCTNAGG 1 cut(s) 480
Bse3DI GCAATG 2 cut(s) 1237, 2212
BseBI CCWGG 5 cut(s) 351, 453, 1763, 1981, 2247
BseDI CCNNGG 2 cut(s) 452, 778
BseGI GGATG 5 cut(s) 150, 340, 1018, 1837, 1854
BseLI CCNNNNNNNGG 6 cut(s) 350, 485, 554, 713, 1443, 2128
BseMI GCAATG 2 cut(s) 1237, 2212
BseMII CTCAG 5 cut(s) 399, 494, 1374, 2023, 2109
BseNI ACTGG 7 cut(s) 309, 499, 653, 689, 1403, 1538, 2086
BseRI GAGGAG 1 cut(s) 2334
BseXI GCAGC 7 cut(s) 479, 764, 1003, 1236, 1635, 1726, 2189
BsgI GTGCAG 1 cut(s) 912
Bsh1236I CGCG 1 cut(s) 1027
BshFI GGCC 3 cut(s) 734, 925, 1194
BsiHKAI GWGCWC 1 cut(s) 1337
BsiHKCI CYCGRG 3 cut(s) 531, 907, 1443
BsiSI CCGG 4 cut(s) 77, 231, 1280, 1455
BslFI GGGAC 5 cut(s) 175, 232, 663, 1409, 1666
BslI CCNNNNNNNGG 6 cut(s) 350, 485, 554, 713, 1443, 2128
BsmAI GTCTC 1 cut(s) 2326
BsmFI GGGAC 5 cut(s) 175, 232, 663, 1409, 1666
BsmI GAATGC 2 cut(s) 186, 1757
BsnI GGCC 3 cut(s) 734, 925, 1194
BsoBI CYCGRG 3 cut(s) 531, 907, 1443
Bsp119I TTCGAA 2 cut(s) 952, 1845
Bsp1286I GDGCHC 1 cut(s) 1337
BspACI CCGC 8 cut(s) 20, 299, 825, 922, 1025, 1298, 1660, 2261
BspANI GGCC 3 cut(s) 734, 925, 1194
BspCNI CTCAG 5 cut(s) 400, 493, 1375, 2022, 2108
BspFNI CGCG 1 cut(s) 1027
BspHI TCATGA 1 cut(s) 1602
BspLI GGNNCC 4 cut(s) 651, 1516, 2053, 2101
BspMAI CTGCAG 1 cut(s) 1716
BspPI GGATC 7 cut(s) 116, 584, 1351, 1544, 2046, 2059, 2102
BspT104I TTCGAA 2 cut(s) 952, 1845
BspTI CTTAAG 1 cut(s) 758
BsrDI GCAATG 2 cut(s) 1237, 2212
BsrI ACTGG 7 cut(s) 309, 499, 653, 689, 1403, 1538, 2086
BssECI CCNNGG 2 cut(s) 452, 778
BssSI CACGAG 1 cut(s) 585
Bst2BI CACGAG 1 cut(s) 585
Bst2UI CCWGG 5 cut(s) 351, 453, 1763, 1981, 2247
Bst4CI ACNGT 7 cut(s) 770, 1126, 1330, 1543, 1610, 1942, 2222
Bst6I CTCTTC 4 cut(s) 228, 1002, 1770, 2037
BstAFI CTTAAG 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 836
BstBI TTCGAA 2 cut(s) 952, 1845
BstC8I GCNNGC 2 cut(s) 927, 1300
BstDEI CTNAG 8 cut(s) 408, 480, 678, 701, 1383, 2009, 2095, 2256
BstDSI CCRYGG 1 cut(s) 778
BstENI CCTNNNNNAGG 1 cut(s) 348
BstF5I GGATG 5 cut(s) 150, 340, 1018, 1837, 1854
BstFNI CGCG 1 cut(s) 1027
BstH2I RGCGCY 1 cut(s) 2253
BstHHI GCGC 3 cut(s) 1029, 2149, 2252
BstMAI GTCTC 1 cut(s) 2326
BstMWI GCNNNNNNNGC 2 cut(s) 1295, 2266
BstNI CCWGG 5 cut(s) 351, 453, 1763, 1981, 2247
BstNSI RCATGY 2 cut(s) 2147, 2342
BstSCI CCNGG 6 cut(s) 229, 349, 451, 1761, 1979, 2245
BstSFI CTRYAG 3 cut(s) 1699, 1712, 2176
BstUI CGCG 1 cut(s) 1027
BstV1I GCAGC 7 cut(s) 479, 764, 1003, 1236, 1635, 1726, 2189
BstV2I GAAGAC 1 cut(s) 543
BstX2I RGATCY 4 cut(s) 121, 1738, 2051, 2107
BstXI CCANNNNNNTGG 1 cut(s) 1769
BstYI RGATCY 4 cut(s) 121, 1738, 2051, 2107
Bsu36I CCTNAGG 1 cut(s) 480
BsuI GTATCC 1 cut(s) 437
BsuRI GGCC 3 cut(s) 734, 925, 1194
BtgI CCRYGG 1 cut(s) 778
BtsCI GGATG 5 cut(s) 150, 340, 1018, 1837, 1854
BtsI GCAGTG 1 cut(s) 1465
BtsIMutI CAGTG 5 cut(s) 660, 1335, 1465, 1552, 2227
Cac8I GCNNGC 2 cut(s) 927, 1300
CaiI CAGNNNCTG 1 cut(s) 386
CciI TCATGA 1 cut(s) 1602
CfoI GCGC 3 cut(s) 1029, 2149, 2252
Cfr13I GGNCC 5 cut(s) 650, 723, 1729, 2013, 2119
CseI GACGC 1 cut(s) 1738
Csp6I GTAC 4 cut(s) 492, 1047, 1879, 2278
CspCI CAANNNNNGTGG 2 cut(s) 2194, 2229
CviAII CATG 9 cut(s) 970, 1069, 1603, 1620, 1656, 2144, 2228, 2281, 2339
CviQI GTAC 4 cut(s) 492, 1047, 1879, 2278
DdeI CTNAG 8 cut(s) 408, 480, 678, 701, 1383, 2009, 2095, 2256
Eam1104I CTCTTC 4 cut(s) 228, 1002, 1770, 2037
EarI CTCTTC 4 cut(s) 228, 1002, 1770, 2037
EciI GGCGGA 1 cut(s) 840
Eco32I GATATC 1 cut(s) 1852
Eco47I GGWCC 5 cut(s) 650, 723, 1729, 2013, 2119
Eco57I CTGAAG 6 cut(s) 81, 537, 1157, 1412, 1703, 1913
Eco81I CCTNAGG 1 cut(s) 480
Eco88I CYCGRG 3 cut(s) 531, 907, 1443
EcoNI CCTNNNNNAGG 1 cut(s) 348
EcoRII CCWGG 5 cut(s) 349, 451, 1761, 1979, 2245
EcoRV GATATC 1 cut(s) 1852
EcoT22I ATGCAT 1 cut(s) 985
FaeI CATG 9 cut(s) 973, 1072, 1606, 1623, 1659, 2147, 2231, 2284, 2342
FalI AAGNNNNNCTT 6 cut(s) 207, 239, 741, 773, 1868, 1900
FaqI GGGAC 5 cut(s) 175, 232, 663, 1409, 1666
FatI CATG 9 cut(s) 969, 1068, 1602, 1619, 1655, 2143, 2227, 2280, 2338
FauI CCCGC 2 cut(s) 13, 1291
FbaI TGATCA 2 cut(s) 367, 862
Fnu4HI GCNGC 9 cut(s) 468, 753, 923, 1017, 1250, 1624, 1715, 2203, 2261
FokI GGATG 5 cut(s) 157, 327, 1025, 1841, 1844
Fsp4HI GCNGC 9 cut(s) 468, 753, 923, 1017, 1250, 1624, 1715, 2203, 2261
FspAI RTGCGCAY 1 cut(s) 2148
FspBI CTAG 6 cut(s) 185, 501, 570, 660, 1511, 2199
FspI TGCGCA 1 cut(s) 2148
GlaI GCGC 3 cut(s) 1028, 2148, 2251
GluI GCNGC 9 cut(s) 468, 753, 923, 1017, 1250, 1624, 1715, 2203, 2261
GsuI CTGGAG 1 cut(s) 326
HaeII RGCGCY 1 cut(s) 2253
HaeIII GGCC 3 cut(s) 734, 925, 1194
HapII CCGG 4 cut(s) 77, 231, 1280, 1455
HgaI GACGC 1 cut(s) 1738
HhaI GCGC 3 cut(s) 1029, 2149, 2252
Hin1II CATG 9 cut(s) 973, 1072, 1606, 1623, 1659, 2147, 2231, 2284, 2342
Hin6I GCGC 3 cut(s) 1027, 2147, 2250
HinP1I GCGC 3 cut(s) 1027, 2147, 2250
HinfI GANTC 7 cut(s) 73, 220, 383, 564, 738, 1265, 2170
HpaII CCGG 4 cut(s) 77, 231, 1280, 1455
HphI GGTGA 5 cut(s) 275, 468, 1232, 1622, 1784
Hpy166II GTNNAC 4 cut(s) 439, 723, 1954, 2141
Hpy188I TCNGA 5 cut(s) 157, 328, 1522, 1722, 2056
Hpy188III TCNNGA 9 cut(s) 31, 587, 742, 812, 907, 1445, 1603, 2011, 2097
Hpy8I GTNNAC 4 cut(s) 439, 723, 1954, 2141
Hpy99I CGWCG 3 cut(s) 263, 1922, 2308
HpyCH4III ACNGT 7 cut(s) 770, 1126, 1330, 1543, 1610, 1942, 2222
HpyCH4IV ACGT 2 cut(s) 373, 835
HpyF10VI GCNNNNNNNGC 2 cut(s) 1295, 2266
HpyF3I CTNAG 8 cut(s) 408, 480, 678, 701, 1383, 2009, 2095, 2256
HpySE526I ACGT 2 cut(s) 373, 835
Hsp92II CATG 9 cut(s) 973, 1072, 1606, 1623, 1659, 2147, 2231, 2284, 2342
HspAI GCGC 3 cut(s) 1027, 2147, 2250
Ksp22I TGATCA 2 cut(s) 367, 862
LmnI GCTCC 2 cut(s) 23, 377
Lsp1109I GCAGC 7 cut(s) 479, 764, 1003, 1236, 1635, 1726, 2189
LweI GCATC 9 cut(s) 181, 349, 521, 805, 992, 1003, 1092, 2011, 2158
MaeI CTAG 6 cut(s) 185, 501, 570, 660, 1511, 2199
MaeII ACGT 2 cut(s) 373, 835
MflI RGATCY 4 cut(s) 121, 1738, 2051, 2107
MhlI GDGCHC 1 cut(s) 1337
MluCI AATT 9 cut(s) 684, 866, 1020, 1095, 1313, 1494, 1554, 1841, 2026
MlyI GAGTC 3 cut(s) 214, 573, 747
MmeI TCCRAC 3 cut(s) 149, 620, 2323
Mph1103I ATGCAT 1 cut(s) 985
MroXI GAANNNNTTC 1 cut(s) 794
MslI CAYNNNNRTG 3 cut(s) 1660, 1830, 2178
MspA1I CMGCKG 1 cut(s) 1354
MspCI CTTAAG 1 cut(s) 758
MspI CCGG 4 cut(s) 77, 231, 1280, 1455
MspR9I CCNGG 6 cut(s) 231, 351, 453, 1763, 1981, 2247
Mva1269I GAATGC 2 cut(s) 186, 1757
MvaI CCWGG 5 cut(s) 351, 453, 1763, 1981, 2247
MvnI CGCG 1 cut(s) 1027
MwoI GCNNNNNNNGC 2 cut(s) 1295, 2266
NciI CCSGG 1 cut(s) 231
NlaIII CATG 9 cut(s) 973, 1072, 1606, 1623, 1659, 2147, 2231, 2284, 2342
NlaIV GGNNCC 4 cut(s) 651, 1516, 2053, 2101
NmuCI GTSAC 7 cut(s) 52, 88, 565, 739, 1220, 1694, 1750
NsbI TGCGCA 1 cut(s) 2148
NsiI ATGCAT 1 cut(s) 985
NspI RCATGY 2 cut(s) 2147, 2342
NspV TTCGAA 2 cut(s) 952, 1845
OliI CACNNNNGTG 1 cut(s) 2178
PaeR7I CTCGAG 1 cut(s) 907
PagI TCATGA 1 cut(s) 1602
PciI ACATGT 1 cut(s) 2338
PctI GAATGC 2 cut(s) 186, 1757
PdmI GAANNNNTTC 1 cut(s) 794
PfeI GAWTC 4 cut(s) 73, 383, 1265, 2170
PfoI TCCNGGA 2 cut(s) 349, 1761
PkrI GCNGC 9 cut(s) 469, 754, 924, 1018, 1251, 1625, 1716, 2204, 2262
PleI GAGTC 3 cut(s) 214, 572, 746
PpsI GAGTC 3 cut(s) 214, 572, 746
Ppu21I YACGTR 1 cut(s) 836
PscI ACATGT 1 cut(s) 2338
Psp6I CCWGG 5 cut(s) 349, 451, 1761, 1979, 2245
PspGI CCWGG 5 cut(s) 349, 451, 1761, 1979, 2245
PspN4I GGNNCC 4 cut(s) 651, 1516, 2053, 2101
PspPI GGNCC 5 cut(s) 650, 723, 1729, 2013, 2119
PstI CTGCAG 1 cut(s) 1716
PstNI CAGNNNCTG 1 cut(s) 386
PsuI RGATCY 4 cut(s) 121, 1738, 2051, 2107
PvuII CAGCTG 1 cut(s) 1354
RsaI GTAC 4 cut(s) 493, 1048, 1880, 2279
RsaNI GTAC 4 cut(s) 492, 1047, 1879, 2278
RseI CAYNNNNRTG 3 cut(s) 1660, 1830, 2178
SatI GCNGC 9 cut(s) 468, 753, 923, 1017, 1250, 1624, 1715, 2203, 2261
Sau96I GGNCC 5 cut(s) 650, 723, 1729, 2013, 2119
SchI GAGTC 3 cut(s) 214, 573, 747
ScrFI CCNGG 6 cut(s) 231, 351, 453, 1763, 1981, 2247
SduI GDGCHC 1 cut(s) 1337
SfaNI GCATC 9 cut(s) 181, 349, 521, 805, 992, 1003, 1092, 2011, 2158
SfcI CTRYAG 3 cut(s) 1699, 1712, 2176
Sfr274I CTCGAG 1 cut(s) 907
SfuI TTCGAA 2 cut(s) 952, 1845
SinI GGWCC 5 cut(s) 650, 723, 1729, 2013, 2119
SlaI CTCGAG 1 cut(s) 907
SmiMI CAYNNNNRTG 3 cut(s) 1660, 1830, 2178
SmlI CTYRAG 2 cut(s) 758, 907
SmoI CTYRAG 2 cut(s) 758, 907
Sse9I AATT 9 cut(s) 684, 866, 1020, 1095, 1313, 1494, 1554, 1841, 2026
SsiI CCGC 8 cut(s) 20, 299, 825, 922, 1025, 1298, 1660, 2261
SspMI CTAG 6 cut(s) 185, 501, 570, 660, 1511, 2199
StyD4I CCNGG 6 cut(s) 229, 349, 451, 1761, 1979, 2245
TaaI ACNGT 7 cut(s) 770, 1126, 1330, 1543, 1610, 1942, 2222
TaiI ACGT 2 cut(s) 376, 838
TaqI TCGA 5 cut(s) 280, 447, 908, 952, 1845
TaqII GACCGA 1 cut(s) 2107
TasI AATT 9 cut(s) 684, 866, 1020, 1095, 1313, 1494, 1554, 1841, 2026
TatI WGTACW 2 cut(s) 1878, 2277
TauI GCSGC 2 cut(s) 925, 2263
TfiI GAWTC 4 cut(s) 73, 383, 1265, 2170
TscAI CASTG 5 cut(s) 660, 1335, 1465, 1552, 2227
TseFI GTSAC 7 cut(s) 52, 88, 565, 739, 1220, 1694, 1750
TseI GCWGC 7 cut(s) 467, 752, 1016, 1249, 1623, 1714, 2202
Tsp45I GTSAC 7 cut(s) 52, 88, 565, 739, 1220, 1694, 1750
TspDTI ATGAA 7 cut(s) 56, 681, 1020, 1348, 1619, 1704, 1836
TspGWI ACGGA 6 cut(s) 107, 419, 537, 1034, 1161, 1847
TspRI CASTG 5 cut(s) 660, 1335, 1465, 1552, 2227
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 5 cut(s) 650, 723, 1729, 2013, 2119
XagI CCTNNNNNAGG 1 cut(s) 348
XapI RAATTY 3 cut(s) 1313, 1841, 2026
XceI RCATGY 2 cut(s) 2147, 2342
XcmI CCANNNNNNNNNTGG 1 cut(s) 884
XhoI CTCGAG 1 cut(s) 907
XmnI GAANNNNTTC 1 cut(s) 794
XspI CTAG 6 cut(s) 185, 501, 570, 660, 1511, 2199
Zsp2I ATGCAT 1 cut(s) 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.