Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19130 AT4G19130 AT5G45400 |
| fragaria_vesca | FvH4_5g23941 |
| malus_domestica | MD06G1015200.v1.1 |
| prunus_persica | Prupe.5G020900_v2.0.a1 |
| pyrus_communis | pycom06g01230 pycom16g25460 |
| rosa_chinensis | RchiOBHm_Chr7g0213381 |
| rosa_laevigata | RLG00000002810 |
| rosa_multiflora | Rmu_co8086728.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00246040 |
| rosa_rugosa | Rorug03G0218100 Rorug07G0142000 Rorug07G0142100 |
| rosa_samantha | Rh2BG015800 Rh7AG273600 Rh7BG268900 Rh7CG292700 Rh7DG281000 |
| rosa_wichuraiana | Rw0G012030 Rw7G023720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 478 |
| AccI | GTMKAC | 1 cut(s) | 181 |
| AciI | CCGC | 1 cut(s) | 257 |
| AcoI | YGGCCR | 1 cut(s) | 346 |
| AcsI | RAATTY | 1 cut(s) | 233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 478 |
| AflII | CTTAAG | 1 cut(s) | 89 |
| AflIII | ACRYGT | 2 cut(s) | 55, 323 |
| AgsI | TTSAA | 6 cut(s) | 19, 25, 297, 453, 458, 466 |
| AjnI | CCWGG | 3 cut(s) | 433, 477, 501 |
| AluBI | AGCT | 3 cut(s) | 88, 197, 354 |
| AluI | AGCT | 3 cut(s) | 88, 197, 354 |
| Alw21I | GWGCWC | 1 cut(s) | 244 |
| Alw26I | GTCTC | 2 cut(s) | 120, 382 |
| Ama87I | CYCGRG | 1 cut(s) | 385 |
| AoxI | GGCC | 3 cut(s) | 346, 382, 431 |
| ApoI | RAATTY | 1 cut(s) | 233 |
| AseI | ATTAAT | 1 cut(s) | 150 |
| AspS9I | GGNCC | 1 cut(s) | 383 |
| AvaI | CYCGRG | 1 cut(s) | 385 |
| BalI | TGGCCA | 1 cut(s) | 348 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 409, 441 |
| BbsI | GAAGAC | 1 cut(s) | 417 |
| Bbv12I | GWGCWC | 1 cut(s) | 244 |
| BccI | CCATC | 1 cut(s) | 88 |
| BciT130I | CCWGG | 3 cut(s) | 435, 479, 503 |
| BciVI | GTATCC | 1 cut(s) | 334 |
| BcoDI | GTCTC | 2 cut(s) | 120, 382 |
| BfaI | CTAG | 4 cut(s) | 159, 245, 309, 429 |
| BfmI | CTRYAG | 1 cut(s) | 409 |
| BfrI | CTTAAG | 1 cut(s) | 89 |
| BfuI | GTATCC | 1 cut(s) | 334 |
| Bme1390I | CCNGG | 3 cut(s) | 435, 479, 503 |
| BmeT110I | CYCGRG | 1 cut(s) | 385 |
| BmgT120I | GGNCC | 1 cut(s) | 383 |
| BmrFI | CCNGG | 3 cut(s) | 435, 479, 503 |
| BpiI | GAAGAC | 1 cut(s) | 417 |
| BsaJI | CCNNGG | 1 cut(s) | 502 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 478 |
| Bse118I | RCCGGY | 1 cut(s) | 224 |
| Bse1I | ACTGG | 1 cut(s) | 349 |
| BseBI | CCWGG | 3 cut(s) | 435, 479, 503 |
| BseDI | CCNNGG | 1 cut(s) | 502 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 478 |
| BseNI | ACTGG | 1 cut(s) | 349 |
| BseRI | GAGGAG | 1 cut(s) | 50 |
| BseYI | CCCAGC | 1 cut(s) | 197 |
| BshFI | GGCC | 3 cut(s) | 348, 384, 433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 244 |
| BsiHKCI | CYCGRG | 1 cut(s) | 385 |
| BsiSI | CCGG | 1 cut(s) | 225 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 478 |
| BsmAI | GTCTC | 2 cut(s) | 120, 382 |
| BsnI | GGCC | 3 cut(s) | 348, 384, 433 |
| BsoBI | CYCGRG | 1 cut(s) | 385 |
| Bsp1286I | GDGCHC | 1 cut(s) | 244 |
| BspACI | CCGC | 1 cut(s) | 257 |
| BspANI | GGCC | 3 cut(s) | 348, 384, 433 |
| BspTI | CTTAAG | 1 cut(s) | 89 |
| BsrFI | RCCGGY | 1 cut(s) | 224 |
| BsrI | ACTGG | 1 cut(s) | 349 |
| BssAI | RCCGGY | 1 cut(s) | 224 |
| BssECI | CCNNGG | 1 cut(s) | 502 |
| Bst2UI | CCWGG | 3 cut(s) | 435, 479, 503 |
| Bst4CI | ACNGT | 3 cut(s) | 215, 284, 393 |
| BstAFI | CTTAAG | 1 cut(s) | 89 |
| BstMAI | GTCTC | 2 cut(s) | 120, 382 |
| BstNI | CCWGG | 3 cut(s) | 435, 479, 503 |
| BstNSI | RCATGY | 1 cut(s) | 327 |
| BstSCI | CCNGG | 3 cut(s) | 433, 477, 501 |
| BstSFI | CTRYAG | 1 cut(s) | 409 |
| BstV2I | GAAGAC | 1 cut(s) | 417 |
| BsuI | GTATCC | 1 cut(s) | 334 |
| BsuRI | GGCC | 3 cut(s) | 348, 384, 433 |
| Cfr10I | RCCGGY | 1 cut(s) | 224 |
| Cfr13I | GGNCC | 1 cut(s) | 383 |
| CseI | GACGC | 1 cut(s) | 411 |
| CviAII | CATG | 1 cut(s) | 324 |
| CviJI | RGCY | 9 cut(s) | 88, 187, 197, 303, 348, 354, 384, 408, 433 |
| CviKI_1 | RGCY | 9 cut(s) | 88, 187, 197, 303, 348, 354, 384, 408, 433 |
| EaeI | YGGCCR | 1 cut(s) | 346 |
| Eco88I | CYCGRG | 1 cut(s) | 385 |
| EcoRII | CCWGG | 3 cut(s) | 433, 477, 501 |
| FaeI | CATG | 1 cut(s) | 327 |
| FaiI | YATR | 5 cut(s) | 279, 325, 336, 351, 411 |
| FatI | CATG | 1 cut(s) | 323 |
| FauI | CCCGC | 1 cut(s) | 250 |
| FblI | GTMKAC | 1 cut(s) | 181 |
| FspBI | CTAG | 4 cut(s) | 159, 245, 309, 429 |
| GsaI | CCCAGC | 1 cut(s) | 201 |
| HaeIII | GGCC | 3 cut(s) | 348, 384, 433 |
| HapII | CCGG | 1 cut(s) | 225 |
| HgaI | GACGC | 1 cut(s) | 411 |
| Hin1II | CATG | 1 cut(s) | 327 |
| HindIII | AAGCTT | 1 cut(s) | 86 |
| HinfI | GANTC | 2 cut(s) | 162, 271 |
| HpaII | CCGG | 1 cut(s) | 225 |
| Hpy166II | GTNNAC | 1 cut(s) | 182 |
| Hpy188III | TCNNGA | 1 cut(s) | 166 |
| Hpy8I | GTNNAC | 1 cut(s) | 182 |
| HpyCH4III | ACNGT | 3 cut(s) | 215, 284, 393 |
| HpyCH4IV | ACGT | 1 cut(s) | 55 |
| HpySE526I | ACGT | 1 cut(s) | 55 |
| Hsp92II | CATG | 1 cut(s) | 327 |
| LmnI | GCTCC | 1 cut(s) | 239 |
| LpnPI | CCDG | 9 cut(s) | 157, 183, 238, 330, 420, 447, 464, 488, 491 |
| MaeI | CTAG | 4 cut(s) | 159, 245, 309, 429 |
| MaeII | ACGT | 1 cut(s) | 55 |
| MaeIII | GTNAC | 4 cut(s) | 5, 209, 215, 260 |
| MboII | GAAGA | 2 cut(s) | 102, 417 |
| MfeI | CAATTG | 1 cut(s) | 453 |
| MhlI | GDGCHC | 1 cut(s) | 244 |
| MlsI | TGGCCA | 1 cut(s) | 348 |
| MluCI | AATT | 4 cut(s) | 147, 233, 328, 453 |
| MluNI | TGGCCA | 1 cut(s) | 348 |
| MnlI | CCTC | 3 cut(s) | 28, 127, 331 |
| Mox20I | TGGCCA | 1 cut(s) | 348 |
| MscI | TGGCCA | 1 cut(s) | 348 |
| MseI | TTAA | 3 cut(s) | 90, 150, 508 |
| Msp20I | TGGCCA | 1 cut(s) | 348 |
| MspA1I | CMGCKG | 1 cut(s) | 197 |
| MspCI | CTTAAG | 1 cut(s) | 89 |
| MspI | CCGG | 1 cut(s) | 225 |
| MspR9I | CCNGG | 3 cut(s) | 435, 479, 503 |
| MunI | CAATTG | 1 cut(s) | 453 |
| MvaI | CCWGG | 3 cut(s) | 435, 479, 503 |
| NlaIII | CATG | 1 cut(s) | 327 |
| NmuCI | GTSAC | 1 cut(s) | 260 |
| NspI | RCATGY | 1 cut(s) | 327 |
| PciI | ACATGT | 1 cut(s) | 323 |
| PfeI | GAWTC | 2 cut(s) | 162, 271 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 478 |
| PscI | ACATGT | 1 cut(s) | 323 |
| PshBI | ATTAAT | 1 cut(s) | 150 |
| Psp6I | CCWGG | 3 cut(s) | 433, 477, 501 |
| PspFI | CCCAGC | 1 cut(s) | 197 |
| PspGI | CCWGG | 3 cut(s) | 433, 477, 501 |
| PspPI | GGNCC | 1 cut(s) | 383 |
| PvuII | CAGCTG | 1 cut(s) | 197 |
| SaqAI | TTAA | 3 cut(s) | 90, 150, 508 |
| Sau96I | GGNCC | 1 cut(s) | 383 |
| ScrFI | CCNGG | 3 cut(s) | 435, 479, 503 |
| SduI | GDGCHC | 1 cut(s) | 244 |
| SetI | ASST | 6 cut(s) | 58, 90, 199, 356, 439, 480 |
| SfcI | CTRYAG | 1 cut(s) | 409 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| Sse9I | AATT | 4 cut(s) | 147, 233, 328, 453 |
| SsiI | CCGC | 1 cut(s) | 257 |
| SspI | AATATT | 1 cut(s) | 103 |
| SspMI | CTAG | 4 cut(s) | 159, 245, 309, 429 |
| StyD4I | CCNGG | 3 cut(s) | 433, 477, 501 |
| TaaI | ACNGT | 3 cut(s) | 215, 284, 393 |
| TaiI | ACGT | 1 cut(s) | 58 |
| TasI | AATT | 4 cut(s) | 147, 233, 328, 453 |
| TfiI | GAWTC | 2 cut(s) | 162, 271 |
| Tru1I | TTAA | 3 cut(s) | 90, 150, 508 |
| Tru9I | TTAA | 3 cut(s) | 90, 150, 508 |
| TseFI | GTSAC | 1 cut(s) | 260 |
| Tsp45I | GTSAC | 1 cut(s) | 260 |
| TspDTI | ATGAA | 2 cut(s) | 66, 374 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 478 |
| Vha464I | CTTAAG | 1 cut(s) | 89 |
| VspI | ATTAAT | 1 cut(s) | 150 |
| XapI | RAATTY | 1 cut(s) | 233 |
| XceI | RCATGY | 1 cut(s) | 327 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 482 |
| XmiI | GTMKAC | 1 cut(s) | 181 |
| XspI | CTAG | 4 cut(s) | 159, 245, 309, 429 |