Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19130 AT4G19130 AT5G45400 |
| fragaria_vesca | FvH4_5g23941 |
| malus_domestica | MD06G1015200.v1.1 |
| prunus_persica | Prupe.5G020900_v2.0.a1 |
| pyrus_communis | pycom06g01230 pycom16g25460 |
| rosa_chinensis | RchiOBHm_Chr7g0213381 |
| rosa_laevigata | RLG00000002810 |
| rosa_multiflora | Rmu_co8086728.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00246040 |
| rosa_rugosa | Rorug03G0218100 Rorug07G0142000 Rorug07G0142100 |
| rosa_samantha | Rh2BG015800 Rh7AG273600 Rh7BG268900 Rh7CG292700 Rh7DG281000 |
| rosa_wichuraiana | Rw0G012030 Rw7G023720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 308, 1667 |
| AarI | CACCTGC | 1 cut(s) | 1547 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2274 |
| Acc36I | ACCTGC | 2 cut(s) | 1547, 1903 |
| AccB1I | GGYRCC | 1 cut(s) | 200 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 587, 620, 2468, 2555 |
| AccBSI | CCGCTC | 3 cut(s) | 1609, 1702, 2432 |
| AccI | GTMKAC | 2 cut(s) | 1891, 2206 |
| AccII | CGCG | 1 cut(s) | 115 |
| AciI | CCGC | 8 cut(s) | 292, 704, 820, 1430, 1609, 1700, 2432, 2565 |
| AclWI | GGATC | 4 cut(s) | 613, 1263, 1646, 1839 |
| AcoI | YGGCCR | 2 cut(s) | 701, 2374 |
| AcsI | RAATTY | 5 cut(s) | 933, 1135, 1324, 1979, 2258 |
| AcuI | CTGAAG | 1 cut(s) | 221 |
| AcvI | CACGTG | 1 cut(s) | 1487 |
| AfaI | GTAC | 3 cut(s) | 53, 277, 559 |
| AfeI | AGCGCT | 2 cut(s) | 2167, 2311 |
| AflII | CTTAAG | 1 cut(s) | 2111 |
| AflIII | ACRYGT | 1 cut(s) | 2029 |
| AjiI | CACGTC | 1 cut(s) | 94 |
| AjnI | CCWGG | 9 cut(s) | 65, 403, 535, 586, 601, 1544, 2413, 2461, 2506 |
| AluBI | AGCT | 6 cut(s) | 13, 473, 848, 1456, 2352, 2382 |
| AluI | AGCT | 6 cut(s) | 13, 473, 848, 1456, 2352, 2382 |
| Alw21I | GWGCWC | 2 cut(s) | 90, 436 |
| Alw26I | GTCTC | 5 cut(s) | 56, 1250, 2114, 2322, 2517 |
| Alw44I | GTGCAC | 1 cut(s) | 432 |
| AlwI | GGATC | 4 cut(s) | 613, 1263, 1646, 1839 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 587 |
| Aor51HI | AGCGCT | 2 cut(s) | 2167, 2311 |
| AoxI | GGCC | 7 cut(s) | 123, 133, 229, 701, 2374, 2410, 2459 |
| ApaI | GGGCCC | 2 cut(s) | 127, 137 |
| ApaLI | GTGCAC | 1 cut(s) | 432 |
| ApeKI | GCWGC | 5 cut(s) | 654, 797, 1028, 1725, 2562 |
| ApoI | RAATTY | 5 cut(s) | 933, 1135, 1324, 1979, 2258 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 266, 1657 |
| AspLEI | GCGC | 4 cut(s) | 115, 117, 2168, 2312 |
| AspS9I | GGNCC | 9 cut(s) | 123, 124, 133, 134, 365, 752, 1437, 2267, 2411 |
| AsuC2I | CCSGG | 2 cut(s) | 132, 2532 |
| AsuHPI | GGTGA | 8 cut(s) | 262, 563, 896, 1724, 1886, 2030, 2074, 2495 |
| AvaII | GGWCC | 4 cut(s) | 365, 752, 1437, 2267 |
| AxyI | CCTNAGG | 2 cut(s) | 391, 666 |
| BaeGI | GKGCMC | 4 cut(s) | 127, 137, 203, 436 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2575, 2608 |
| BalI | TGGCCA | 1 cut(s) | 2376 |
| BanI | GGYRCC | 1 cut(s) | 200 |
| BanII | GRGCYC | 3 cut(s) | 127, 137, 248 |
| BauI | CACGAG | 1 cut(s) | 879 |
| BbrPI | CACGTG | 1 cut(s) | 1487 |
| BbsI | GAAGAC | 1 cut(s) | 547 |
| Bbv12I | GWGCWC | 2 cut(s) | 90, 436 |
| BbvCI | CCTCAGC | 1 cut(s) | 708 |
| BbvI | GCAGC | 5 cut(s) | 666, 784, 1040, 1737, 2574 |
| BccI | CCATC | 9 cut(s) | 83, 94, 164, 257, 736, 881, 1223, 1745, 2110 |
| BceAI | ACGGC | 1 cut(s) | 1872 |
| BciT130I | CCWGG | 9 cut(s) | 67, 405, 537, 588, 603, 1546, 2415, 2463, 2508 |
| BciVI | GTATCC | 3 cut(s) | 750, 1219, 1544 |
| BclI | TGATCA | 3 cut(s) | 297, 964, 1777 |
| BcnI | CCSGG | 2 cut(s) | 132, 2532 |
| BcoDI | GTCTC | 5 cut(s) | 56, 1250, 2114, 2322, 2517 |
| BfaI | CTAG | 9 cut(s) | 489, 660, 780, 837, 1446, 2082, 2219, 2313, 2457 |
| BfmI | CTRYAG | 3 cut(s) | 357, 868, 1801 |
| BfoI | RGCGCY | 2 cut(s) | 2169, 2313 |
| BfrI | CTTAAG | 1 cut(s) | 2111 |
| BfuAI | ACCTGC | 2 cut(s) | 1547, 1903 |
| BfuI | GTATCC | 3 cut(s) | 750, 1219, 1544 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1037 |
| BisI | GCNGC | 7 cut(s) | 655, 704, 798, 1029, 1610, 1726, 2563 |
| BlsI | GCNGC | 7 cut(s) | 656, 705, 799, 1030, 1611, 1727, 2564 |
| Bme18I | GGWCC | 4 cut(s) | 365, 752, 1437, 2267 |
| BmgBI | CACGTC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 9 cut(s) | 123, 124, 133, 134, 365, 752, 1437, 2267, 2411 |
| BmrI | ACTGGG | 2 cut(s) | 1376, 2524 |
| BmsI | GCATC | 3 cut(s) | 183, 1094, 2359 |
| BmuI | ACTGGG | 2 cut(s) | 1376, 2524 |
| BpiI | GAAGAC | 1 cut(s) | 547 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 547, 579 |
| BpmI | CTGGAG | 4 cut(s) | 1259, 1799, 2205, 2532 |
| Bpu10I | CCTNAGC | 1 cut(s) | 708 |
| BpuMI | CCSGG | 2 cut(s) | 132, 2532 |
| Bsa29I | ATCGAT | 1 cut(s) | 1088 |
| BsaAI | YACGTR | 1 cut(s) | 1487 |
| BsaI | GGTCTC | 2 cut(s) | 56, 2322 |
| BsaJI | CCNNGG | 8 cut(s) | 535, 814, 1011, 1545, 1785, 2142, 2413, 2414 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 342, 372 |
| Bse21I | CCTNAGG | 2 cut(s) | 391, 666 |
| Bse3DI | GCAATG | 1 cut(s) | 1339 |
| BseBI | CCWGG | 9 cut(s) | 67, 405, 537, 588, 603, 1546, 2415, 2463, 2508 |
| BseCI | ATCGAT | 1 cut(s) | 1088 |
| BseDI | CCNNGG | 8 cut(s) | 535, 814, 1011, 1545, 1785, 2142, 2413, 2414 |
| BseGI | GGATG | 5 cut(s) | 105, 175, 198, 1117, 2374 |
| BseMI | GCAATG | 1 cut(s) | 1339 |
| BseMII | CTCAG | 6 cut(s) | 405, 657, 722, 1229, 1274, 2339 |
| BsePI | GCGCGC | 1 cut(s) | 113 |
| BseRI | GAGGAG | 2 cut(s) | 1510, 2021 |
| BseSI | GKGCMC | 4 cut(s) | 127, 137, 203, 436 |
| BseX3I | CGGCCG | 1 cut(s) | 701 |
| BseXI | GCAGC | 5 cut(s) | 666, 784, 1040, 1737, 2574 |
| BseYI | CCCAGC | 4 cut(s) | 126, 196, 1612, 2162 |
| BsgI | GTGCAG | 1 cut(s) | 468 |
| Bsh1236I | CGCG | 1 cut(s) | 115 |
| Bsh1285I | CGRYCG | 1 cut(s) | 704 |
| BshFI | GGCC | 7 cut(s) | 125, 135, 231, 703, 2376, 2412, 2461 |
| BshNI | GGYRCC | 1 cut(s) | 200 |
| BshVI | ATCGAT | 1 cut(s) | 1088 |
| BsiEI | CGRYCG | 1 cut(s) | 704 |
| BsiHKAI | GWGCWC | 2 cut(s) | 90, 436 |
| BsiSI | CCGG | 2 cut(s) | 131, 2532 |
| BslFI | GGGAC | 4 cut(s) | 1356, 1450, 1630, 2514 |
| BsmAI | GTCTC | 5 cut(s) | 56, 1250, 2114, 2322, 2517 |
| BsmFI | GGGAC | 4 cut(s) | 1356, 1450, 1630, 2514 |
| BsmI | GAATGC | 3 cut(s) | 385, 1376, 2182 |
| BsnI | GGCC | 7 cut(s) | 125, 135, 231, 703, 2376, 2412, 2461 |
| Bso31I | GGTCTC | 2 cut(s) | 56, 2322 |
| Bsp120I | GGGCCC | 2 cut(s) | 123, 133 |
| Bsp1286I | GDGCHC | 6 cut(s) | 90, 127, 137, 203, 248, 436 |
| Bsp19I | CCATGG | 1 cut(s) | 1785 |
| BspACI | CCGC | 8 cut(s) | 292, 704, 820, 1430, 1609, 1700, 2432, 2565 |
| BspANI | GGCC | 7 cut(s) | 125, 135, 231, 703, 2376, 2412, 2461 |
| BspCNI | CTCAG | 6 cut(s) | 404, 658, 721, 1230, 1273, 2340 |
| BspDI | ATCGAT | 1 cut(s) | 1088 |
| BspFNI | CGCG | 1 cut(s) | 115 |
| BspHI | TCATGA | 1 cut(s) | 1704 |
| BspMI | ACCTGC | 2 cut(s) | 1547, 1903 |
| BspPI | GGATC | 4 cut(s) | 613, 1263, 1646, 1839 |
| BspQI | GCTCTTC | 1 cut(s) | 1920 |
| BspT107I | GGYRCC | 1 cut(s) | 200 |
| BspTI | CTTAAG | 1 cut(s) | 2111 |
| BspTNI | GGTCTC | 2 cut(s) | 56, 2322 |
| BsrBI | CCGCTC | 3 cut(s) | 1609, 1702, 2432 |
| BsrDI | GCAATG | 1 cut(s) | 1339 |
| BssECI | CCNNGG | 8 cut(s) | 535, 814, 1011, 1545, 1785, 2142, 2413, 2414 |
| BssHII | GCGCGC | 1 cut(s) | 113 |
| BssNAI | GTATAC | 1 cut(s) | 1892 |
| BssSI | CACGAG | 1 cut(s) | 879 |
| BssT1I | CCWWGG | 3 cut(s) | 814, 1011, 1785 |
| Bst1107I | GTATAC | 1 cut(s) | 1892 |
| Bst2BI | CACGAG | 1 cut(s) | 879 |
| Bst2UI | CCWGG | 9 cut(s) | 67, 405, 537, 588, 603, 1546, 2415, 2463, 2508 |
| Bst4CI | ACNGT | 7 cut(s) | 387, 463, 1645, 1657, 2044, 2360, 2528 |
| Bst6I | CTCTTC | 3 cut(s) | 1259, 1473, 1920 |
| BstAFI | CTTAAG | 1 cut(s) | 2111 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 193 |
| BstBAI | YACGTR | 1 cut(s) | 1487 |
| BstC8I | GCNNGC | 6 cut(s) | 115, 1389, 1696, 1700, 2374, 2434 |
| BstDEI | CTNAG | 7 cut(s) | 391, 666, 708, 860, 1238, 1260, 2348 |
| BstDSI | CCRYGG | 1 cut(s) | 1785 |
| BstEII | GGTNACC | 1 cut(s) | 2284 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 360, 747 |
| BstF5I | GGATG | 5 cut(s) | 105, 175, 198, 1117, 2374 |
| BstFNI | CGCG | 1 cut(s) | 115 |
| BstH2I | RGCGCY | 2 cut(s) | 2169, 2313 |
| BstHHI | GCGC | 4 cut(s) | 115, 117, 2168, 2312 |
| BstMAI | GTCTC | 5 cut(s) | 56, 1250, 2114, 2322, 2517 |
| BstMCI | CGRYCG | 1 cut(s) | 704 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 79, 193, 709, 1037, 2496 |
| BstNI | CCWGG | 9 cut(s) | 67, 405, 537, 588, 603, 1546, 2415, 2463, 2508 |
| BstNSI | RCATGY | 2 cut(s) | 548, 1698 |
| BstPI | GGTNACC | 1 cut(s) | 2284 |
| BstSFI | CTRYAG | 3 cut(s) | 357, 868, 1801 |
| BstSLI | GKGCMC | 4 cut(s) | 127, 137, 203, 436 |
| BstUI | CGCG | 1 cut(s) | 115 |
| BstV1I | GCAGC | 5 cut(s) | 666, 784, 1040, 1737, 2574 |
| BstV2I | GAAGAC | 1 cut(s) | 547 |
| BstX2I | RGATCY | 1 cut(s) | 1268 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 422, 2507 |
| BstYI | RGATCY | 1 cut(s) | 1268 |
| BstZ17I | GTATAC | 1 cut(s) | 1892 |
| BstZI | CGGCCG | 1 cut(s) | 701 |
| Bsu15I | ATCGAT | 1 cut(s) | 1088 |
| Bsu36I | CCTNAGG | 2 cut(s) | 391, 666 |
| BsuI | GTATCC | 3 cut(s) | 750, 1219, 1544 |
| BsuRI | GGCC | 7 cut(s) | 125, 135, 231, 703, 2376, 2412, 2461 |
| BsuTUI | ATCGAT | 1 cut(s) | 1088 |
| BtgI | CCRYGG | 1 cut(s) | 1785 |
| BtrI | CACGTC | 1 cut(s) | 94 |
| BtsCI | GGATG | 5 cut(s) | 105, 175, 198, 1117, 2374 |
| BtsI | GCAGTG | 3 cut(s) | 124, 436, 2196 |
| BtsIMutI | CAGTG | 6 cut(s) | 124, 215, 436, 1389, 2196, 2512 |
| BveI | ACCTGC | 2 cut(s) | 1547, 1903 |
| Cac8I | GCNNGC | 6 cut(s) | 115, 1389, 1696, 1700, 2374, 2434 |
| CaiI | CAGNNNCTG | 1 cut(s) | 587 |
| CciI | TCATGA | 1 cut(s) | 1704 |
| CfoI | GCGC | 4 cut(s) | 115, 117, 2168, 2312 |
| Cfr13I | GGNCC | 9 cut(s) | 123, 124, 133, 134, 365, 752, 1437, 2267, 2411 |
| ClaI | ATCGAT | 1 cut(s) | 1088 |
| Csp6I | GTAC | 3 cut(s) | 52, 276, 558 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 803, 838, 862, 897 |
| CviQI | GTAC | 3 cut(s) | 52, 276, 558 |
| DdeI | CTNAG | 7 cut(s) | 391, 666, 708, 860, 1238, 1260, 2348 |
| DraI | TTTAAA | 1 cut(s) | 1023 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2274 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2274 |
| EaeI | YGGCCR | 2 cut(s) | 701, 2374 |
| EagI | CGGCCG | 1 cut(s) | 701 |
| Eam1104I | CTCTTC | 3 cut(s) | 1259, 1473, 1920 |
| EarI | CTCTTC | 3 cut(s) | 1259, 1473, 1920 |
| EclXI | CGGCCG | 1 cut(s) | 701 |
| Eco130I | CCWWGG | 3 cut(s) | 814, 1011, 1785 |
| Eco147I | AGGCCT | 1 cut(s) | 231 |
| Eco24I | GRGCYC | 3 cut(s) | 127, 137, 248 |
| Eco31I | GGTCTC | 2 cut(s) | 56, 2322 |
| Eco32I | GATATC | 1 cut(s) | 1576 |
| Eco47I | GGWCC | 4 cut(s) | 365, 752, 1437, 2267 |
| Eco47III | AGCGCT | 2 cut(s) | 2167, 2311 |
| Eco52I | CGGCCG | 1 cut(s) | 701 |
| Eco57I | CTGAAG | 1 cut(s) | 221 |
| Eco72I | CACGTG | 1 cut(s) | 1487 |
| Eco81I | CCTNAGG | 2 cut(s) | 391, 666 |
| Eco91I | GGTNACC | 1 cut(s) | 2284 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 360, 747 |
| EcoO109I | RGGNCCY | 3 cut(s) | 123, 134, 365 |
| EcoO65I | GGTNACC | 1 cut(s) | 2284 |
| EcoRII | CCWGG | 9 cut(s) | 65, 403, 535, 586, 601, 1544, 2413, 2461, 2506 |
| EcoRV | GATATC | 1 cut(s) | 1576 |
| EcoT14I | CCWWGG | 3 cut(s) | 814, 1011, 1785 |
| EcoT38I | GRGCYC | 3 cut(s) | 127, 137, 248 |
| ErhI | CCWWGG | 3 cut(s) | 814, 1011, 1785 |
| FaqI | GGGAC | 4 cut(s) | 1356, 1450, 1630, 2514 |
| FauI | CCCGC | 2 cut(s) | 1707, 2425 |
| FbaI | TGATCA | 3 cut(s) | 297, 964, 1777 |
| FblI | GTMKAC | 2 cut(s) | 1891, 2206 |
| Fnu4HI | GCNGC | 7 cut(s) | 655, 704, 798, 1029, 1610, 1726, 2563 |
| FokI | GGATG | 5 cut(s) | 112, 182, 205, 1124, 2381 |
| FriOI | GRGCYC | 3 cut(s) | 127, 137, 248 |
| Fsp4HI | GCNGC | 7 cut(s) | 655, 704, 798, 1029, 1610, 1726, 2563 |
| FspBI | CTAG | 9 cut(s) | 489, 660, 780, 837, 1446, 2082, 2219, 2313, 2457 |
| GlaI | GCGC | 4 cut(s) | 114, 116, 2167, 2311 |
| GluI | GCNGC | 7 cut(s) | 655, 704, 798, 1029, 1610, 1726, 2563 |
| GsaI | CCCAGC | 4 cut(s) | 130, 200, 1616, 2166 |
| GsuI | CTGGAG | 4 cut(s) | 1259, 1799, 2205, 2532 |
| HaeII | RGCGCY | 2 cut(s) | 2169, 2313 |
| HaeIII | GGCC | 7 cut(s) | 125, 135, 231, 703, 2376, 2412, 2461 |
| HapII | CCGG | 2 cut(s) | 131, 2532 |
| HhaI | GCGC | 4 cut(s) | 115, 117, 2168, 2312 |
| Hin6I | GCGC | 4 cut(s) | 113, 115, 2166, 2310 |
| HinP1I | GCGC | 4 cut(s) | 113, 115, 2166, 2310 |
| HinfI | GANTC | 5 cut(s) | 805, 917, 1118, 1258, 1367 |
| HpaII | CCGG | 2 cut(s) | 131, 2532 |
| HphI | GGTGA | 8 cut(s) | 262, 563, 896, 1724, 1886, 2030, 2074, 2495 |
| Hpy166II | GTNNAC | 5 cut(s) | 434, 825, 1892, 2065, 2207 |
| Hpy188III | TCNNGA | 5 cut(s) | 479, 914, 1705, 1865, 2427 |
| Hpy8I | GTNNAC | 5 cut(s) | 434, 825, 1892, 2065, 2207 |
| Hpy99I | CGWCG | 1 cut(s) | 95 |
| HpyAV | CCTTC | 8 cut(s) | 235, 1160, 1276, 1420, 1508, 1957, 2053, 2331 |
| HpyCH4III | ACNGT | 7 cut(s) | 387, 463, 1645, 1657, 2044, 2360, 2528 |
| HpyCH4IV | ACGT | 4 cut(s) | 93, 737, 1486, 2029 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 79, 193, 709, 1037, 2496 |
| HpyF3I | CTNAG | 7 cut(s) | 391, 666, 708, 860, 1238, 1260, 2348 |
| HpySE526I | ACGT | 4 cut(s) | 93, 737, 1486, 2029 |
| HspAI | GCGC | 4 cut(s) | 113, 115, 2166, 2310 |
| Ksp22I | TGATCA | 3 cut(s) | 297, 964, 1777 |
| LguI | GCTCTTC | 1 cut(s) | 1920 |
| LmnI | GCTCC | 3 cut(s) | 251, 2387, 2429 |
| Lsp1109I | GCAGC | 5 cut(s) | 666, 784, 1040, 1737, 2574 |
| LweI | GCATC | 3 cut(s) | 183, 1094, 2359 |
| MaeI | CTAG | 9 cut(s) | 489, 660, 780, 837, 1446, 2082, 2219, 2313, 2457 |
| MaeII | ACGT | 4 cut(s) | 93, 737, 1486, 2029 |
| MbiI | CCGCTC | 3 cut(s) | 1609, 1702, 2432 |
| MfeI | CAATTG | 1 cut(s) | 792 |
| MflI | RGATCY | 1 cut(s) | 1268 |
| MhlI | GDGCHC | 6 cut(s) | 90, 127, 137, 203, 248, 436 |
| MlsI | TGGCCA | 1 cut(s) | 2376 |
| MluNI | TGGCCA | 1 cut(s) | 2376 |
| MlyI | GAGTC | 2 cut(s) | 1112, 1252 |
| MmeI | TCCRAC | 1 cut(s) | 758 |
| Mox20I | TGGCCA | 1 cut(s) | 2376 |
| MroXI | GAANNNNTTC | 2 cut(s) | 266, 1657 |
| MscI | TGGCCA | 1 cut(s) | 2376 |
| MseI | TTAA | 6 cut(s) | 617, 951, 1022, 1410, 1599, 2112 |
| MslI | CAYNNNNRTG | 1 cut(s) | 441 |
| Msp20I | TGGCCA | 1 cut(s) | 2376 |
| MspA1I | CMGCKG | 1 cut(s) | 2565 |
| MspCI | CTTAAG | 1 cut(s) | 2111 |
| MspI | CCGG | 2 cut(s) | 131, 2532 |
| MunI | CAATTG | 1 cut(s) | 792 |
| Mva1269I | GAATGC | 3 cut(s) | 385, 1376, 2182 |
| MvaI | CCWGG | 9 cut(s) | 67, 405, 537, 588, 603, 1546, 2415, 2463, 2508 |
| MvnI | CGCG | 1 cut(s) | 115 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 79, 193, 709, 1037, 2496 |
| NciI | CCSGG | 2 cut(s) | 132, 2532 |
| NcoI | CCATGG | 1 cut(s) | 1785 |
| NmeAIII | GCCGAG | 1 cut(s) | 679 |
| NmuCI | GTSAC | 4 cut(s) | 463, 841, 1796, 2483 |
| NspI | RCATGY | 2 cut(s) | 548, 1698 |
| PaeI | GCATGC | 1 cut(s) | 1698 |
| PagI | TCATGA | 1 cut(s) | 1704 |
| PaqCI | CACCTGC | 1 cut(s) | 1547 |
| PasI | CCCWGGG | 1 cut(s) | 2414 |
| PauI | GCGCGC | 1 cut(s) | 113 |
| PceI | AGGCCT | 1 cut(s) | 231 |
| PciSI | GCTCTTC | 1 cut(s) | 1920 |
| PctI | GAATGC | 3 cut(s) | 385, 1376, 2182 |
| PdmI | GAANNNNTTC | 2 cut(s) | 266, 1657 |
| PfeI | GAWTC | 3 cut(s) | 805, 917, 1367 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 587, 620, 2468, 2555 |
| PfoI | TCCNGGA | 1 cut(s) | 601 |
| PkrI | GCNGC | 7 cut(s) | 656, 705, 799, 1030, 1611, 1727, 2564 |
| PleI | GAGTC | 2 cut(s) | 1112, 1252 |
| PmaCI | CACGTG | 1 cut(s) | 1487 |
| PmlI | CACGTG | 1 cut(s) | 1487 |
| PpsI | GAGTC | 2 cut(s) | 1112, 1252 |
| Ppu21I | YACGTR | 1 cut(s) | 1487 |
| PpuMI | RGGWCCY | 1 cut(s) | 365 |
| PsiI | TTATAA | 2 cut(s) | 308, 1667 |
| Psp5II | RGGWCCY | 1 cut(s) | 365 |
| Psp6I | CCWGG | 9 cut(s) | 65, 403, 535, 586, 601, 1544, 2413, 2461, 2506 |
| PspCI | CACGTG | 1 cut(s) | 1487 |
| PspEI | GGTNACC | 1 cut(s) | 2284 |
| PspFI | CCCAGC | 4 cut(s) | 126, 196, 1612, 2162 |
| PspGI | CCWGG | 9 cut(s) | 65, 403, 535, 586, 601, 1544, 2413, 2461, 2506 |
| PspOMI | GGGCCC | 2 cut(s) | 123, 133 |
| PspPI | GGNCC | 9 cut(s) | 123, 124, 133, 134, 365, 752, 1437, 2267, 2411 |
| PspPPI | RGGWCCY | 1 cut(s) | 365 |
| PstNI | CAGNNNCTG | 1 cut(s) | 587 |
| PsuI | RGATCY | 1 cut(s) | 1268 |
| PteI | GCGCGC | 1 cut(s) | 113 |
| RsaI | GTAC | 3 cut(s) | 53, 277, 559 |
| RsaNI | GTAC | 3 cut(s) | 52, 276, 558 |
| RseI | CAYNNNNRTG | 1 cut(s) | 441 |
| SapI | GCTCTTC | 1 cut(s) | 1920 |
| SaqAI | TTAA | 6 cut(s) | 617, 951, 1022, 1410, 1599, 2112 |
| SatI | GCNGC | 7 cut(s) | 655, 704, 798, 1029, 1610, 1726, 2563 |
| Sau96I | GGNCC | 9 cut(s) | 123, 124, 133, 134, 365, 752, 1437, 2267, 2411 |
| SchI | GAGTC | 2 cut(s) | 1112, 1252 |
| SduI | GDGCHC | 6 cut(s) | 90, 127, 137, 203, 248, 436 |
| SfaNI | GCATC | 3 cut(s) | 183, 1094, 2359 |
| SfcI | CTRYAG | 3 cut(s) | 357, 868, 1801 |
| SinI | GGWCC | 4 cut(s) | 365, 752, 1437, 2267 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 441 |
| SmlI | CTYRAG | 1 cut(s) | 2111 |
| SmoI | CTYRAG | 1 cut(s) | 2111 |
| SphI | GCATGC | 1 cut(s) | 1698 |
| SseBI | AGGCCT | 1 cut(s) | 231 |
| SsiI | CCGC | 8 cut(s) | 292, 704, 820, 1430, 1609, 1700, 2432, 2565 |
| SspI | AATATT | 1 cut(s) | 1474 |
| SspMI | CTAG | 9 cut(s) | 489, 660, 780, 837, 1446, 2082, 2219, 2313, 2457 |
| StuI | AGGCCT | 1 cut(s) | 231 |
| StyI | CCWWGG | 3 cut(s) | 814, 1011, 1785 |
| TaaI | ACNGT | 7 cut(s) | 387, 463, 1645, 1657, 2044, 2360, 2528 |
| TaiI | ACGT | 4 cut(s) | 96, 740, 1489, 2032 |
| TaqI | TCGA | 7 cut(s) | 90, 937, 1088, 1191, 1305, 1717, 2293 |
| TauI | GCSGC | 2 cut(s) | 706, 1612 |
| TfiI | GAWTC | 3 cut(s) | 805, 917, 1367 |
| Tru1I | TTAA | 6 cut(s) | 617, 951, 1022, 1410, 1599, 2112 |
| Tru9I | TTAA | 6 cut(s) | 617, 951, 1022, 1410, 1599, 2112 |
| TscAI | CASTG | 6 cut(s) | 124, 222, 436, 1389, 2203, 2519 |
| TseFI | GTSAC | 4 cut(s) | 463, 841, 1796, 2483 |
| TseI | GCWGC | 5 cut(s) | 654, 797, 1028, 1725, 2562 |
| Tsp45I | GTSAC | 4 cut(s) | 463, 841, 1796, 2483 |
| TspGWI | ACGGA | 1 cut(s) | 2601 |
| TspRI | CASTG | 6 cut(s) | 124, 222, 436, 1389, 2203, 2519 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 587, 620, 2468, 2555 |
| Vha464I | CTTAAG | 1 cut(s) | 2111 |
| VneI | GTGCAC | 1 cut(s) | 432 |
| VpaK11BI | GGWCC | 4 cut(s) | 365, 752, 1437, 2267 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 360, 747 |
| XapI | RAATTY | 5 cut(s) | 933, 1135, 1324, 1979, 2258 |
| XceI | RCATGY | 2 cut(s) | 548, 1698 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 422, 986, 2609 |
| XmiI | GTMKAC | 2 cut(s) | 1891, 2206 |
| XmnI | GAANNNNTTC | 2 cut(s) | 266, 1657 |
| XspI | CTAG | 9 cut(s) | 489, 660, 780, 837, 1446, 2082, 2219, 2313, 2457 |