AT4G28460

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
14065992 .. 14066661
670 bp
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UTR
Exon/CDS
Intron
AT4G28460.1

Sequence Viewer

Length: 219 bp
ATGAGAAGAGTTAGTTGGTCTACTGTTTTGATTGTGGTTGTGATGGTGTCGTTGTTTTTCGTAGAACACGTGGTGGTTCCGGCTGCGGCGGGGAGGGTTCTTACTGAAAAATCGGGAGATGGAAGTGCGACTATGACGGTGGAGAAGATGAAATCGACGGTGGATTCTTGGTTTCAGCGTTTGGCGTCGGGTCCAAGTCCAAGAGGTCGCGGCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

72

Amino Acids

7.83

Weight (kDa)

10.83

Isoelectric Point (pI)

32.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 20
AccII CGCG 1 cut(s) 210
AciI CCGC 3 cut(s) 86, 89, 210
AcoI YGGCCR 1 cut(s) 211
AcvI CACGTG 1 cut(s) 70
AcyI GRCGYC 1 cut(s) 185
AdeI CACNNNGTG 1 cut(s) 73
AflIII ACRYGT 1 cut(s) 67
AjuI GAANNNNNNNTTGG 1 cut(s) 30
AoxI GGCC 1 cut(s) 211
ApeKI GCWGC 1 cut(s) 83
AspS9I GGNCC 1 cut(s) 191
AvaII GGWCC 1 cut(s) 191
BbrPI CACGTG 1 cut(s) 70
BbvI GCAGC 1 cut(s) 70
BccI CCATC 2 cut(s) 37, 113
BisI GCNGC 3 cut(s) 84, 87, 211
BlsI GCNGC 3 cut(s) 85, 88, 212
Bme18I GGWCC 1 cut(s) 191
BmgT120I GGNCC 1 cut(s) 191
BmiI GGNNCC 2 cut(s) 78, 192
BsaAI YACGTR 1 cut(s) 70
BsaHI GRCGYC 1 cut(s) 185
BseXI GCAGC 1 cut(s) 70
Bsh1236I CGCG 1 cut(s) 210
BshFI GGCC 1 cut(s) 213
BsiSI CCGG 1 cut(s) 80
BsnI GGCC 1 cut(s) 213
BspACI CCGC 3 cut(s) 86, 89, 210
BspANI GGCC 1 cut(s) 213
BspFNI CGCG 1 cut(s) 210
BspLI GGNNCC 2 cut(s) 78, 192
BssNI GRCGYC 1 cut(s) 185
Bst4CI ACNGT 3 cut(s) 25, 139, 160
BstACI GRCGYC 1 cut(s) 185
BstBAI YACGTR 1 cut(s) 70
BstFNI CGCG 1 cut(s) 210
BstUI CGCG 1 cut(s) 210
BstV1I GCAGC 1 cut(s) 70
BsuRI GGCC 1 cut(s) 213
Cfr13I GGNCC 1 cut(s) 191
CseI GACGC 1 cut(s) 174
CviJI RGCY 2 cut(s) 83, 213
CviKI_1 RGCY 2 cut(s) 83, 213
DraIII CACNNNGTG 1 cut(s) 73
EaeI YGGCCR 1 cut(s) 211
Eco47I GGWCC 1 cut(s) 191
Eco72I CACGTG 1 cut(s) 70
FaiI YATR 1 cut(s) 134
FauI CCCGC 1 cut(s) 82
FblI GTMKAC 1 cut(s) 20
Fnu4HI GCNGC 3 cut(s) 84, 87, 211
Fsp4HI GCNGC 3 cut(s) 84, 87, 211
GluI GCNGC 3 cut(s) 84, 87, 211
HaeIII GGCC 1 cut(s) 213
HapII CCGG 1 cut(s) 80
HgaI GACGC 1 cut(s) 174
Hin1I GRCGYC 1 cut(s) 185
HinfI GANTC 1 cut(s) 164
HpaII CCGG 1 cut(s) 80
Hpy166II GTNNAC 1 cut(s) 21
Hpy188III TCNNGA 1 cut(s) 114
Hpy8I GTNNAC 1 cut(s) 21
Hpy99I CGWCG 2 cut(s) 160, 190
HpyCH4III ACNGT 3 cut(s) 25, 139, 160
HpyCH4IV ACGT 1 cut(s) 69
HpySE526I ACGT 1 cut(s) 69
Hsp92I GRCGYC 1 cut(s) 185
LpnPI CCDG 1 cut(s) 93
Lsp1109I GCAGC 1 cut(s) 70
MaeII ACGT 1 cut(s) 69
MboII GAAGA 2 cut(s) 18, 157
MnlI CCTC 2 cut(s) 87, 197
MseI TTAA 1 cut(s) 217
MspI CCGG 1 cut(s) 80
MvnI CGCG 1 cut(s) 210
NlaIV GGNNCC 2 cut(s) 78, 192
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PfeI GAWTC 1 cut(s) 164
PkrI GCNGC 3 cut(s) 85, 88, 212
PmaCI CACGTG 1 cut(s) 70
PmlI CACGTG 1 cut(s) 70
Ppu21I YACGTR 1 cut(s) 70
PspCI CACGTG 1 cut(s) 70
PspN4I GGNNCC 2 cut(s) 78, 192
PspPI GGNCC 1 cut(s) 191
SaqAI TTAA 1 cut(s) 217
SatI GCNGC 3 cut(s) 84, 87, 211
Sau96I GGNCC 1 cut(s) 191
SetI ASST 2 cut(s) 72, 208
SgeI CNNG 9 cut(s) 80, 82, 92, 102, 126, 180, 201, 207, 213
SinI GGWCC 1 cut(s) 191
SsiI CCGC 3 cut(s) 86, 89, 210
TaaI ACNGT 3 cut(s) 25, 139, 160
TaiI ACGT 1 cut(s) 72
TaqI TCGA 1 cut(s) 155
TauI GCSGC 2 cut(s) 89, 213
TfiI GAWTC 1 cut(s) 164
Tru1I TTAA 1 cut(s) 217
Tru9I TTAA 1 cut(s) 217
TseI GCWGC 1 cut(s) 83
TspDTI ATGAA 1 cut(s) 164
VpaK11BI GGWCC 1 cut(s) 191
XmiI GTMKAC 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.