Rh4BG134600

Membrane-associated 30 kDa protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
22546980 .. 22550135
3156 bp
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UTR
Exon/CDS
Intron
Rh4BG134600.1

Sequence Viewer

Length: 276 bp
ATGTCTGCAAGGACTGCTACTGAAGTGAGTGAGATGGTGGGGAATGTTGATATAGGTCATGCCCTTTCTGCTTTTGAAAAGATAGAAGAGAAAGGTAACATCCAGGTGGCTTCAGACTTCAAAACAATTAACAATTTCAGACTTTTCTTGCTCAGTCAATTCAGAAACAAGAACTGGGTCAATGGCCTGGGTAGTAGTCAATTAATAATCAAATTTGTGAGGTCTTCTCTGATTCCACCCAATGACTTAAACCACTCAAACCAGTCTTGGAGTTGA

Protein Analysis

91

Amino Acids

10.2

Weight (kDa)

8.18

Isoelectric Point (pI)

38.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 212
AcuI CTGAAG 2 cut(s) 42, 96
AgsI TTSAA 2 cut(s) 77, 121
AjnI CCWGG 2 cut(s) 102, 186
AoxI GGCC 1 cut(s) 184
ApoI RAATTY 1 cut(s) 212
AseI ATTAAT 1 cut(s) 203
BbsI GAAGAC 1 cut(s) 216
BccI CCATC 1 cut(s) 28
BciT130I CCWGG 2 cut(s) 104, 188
Bme1390I CCNGG 2 cut(s) 104, 188
BmrFI CCNGG 2 cut(s) 104, 188
BmrI ACTGGG 1 cut(s) 184
BmuI ACTGGG 1 cut(s) 184
BpiI GAAGAC 1 cut(s) 216
BplI GAGNNNNNCTC 2 cut(s) 211, 243
BsaJI CCNNGG 1 cut(s) 187
Bse1I ACTGG 2 cut(s) 179, 262
BseBI CCWGG 2 cut(s) 104, 188
BseDI CCNNGG 1 cut(s) 187
BseGI GGATG 1 cut(s) 99
BseMII CTCAG 1 cut(s) 166
BseNI ACTGG 2 cut(s) 179, 262
BshFI GGCC 1 cut(s) 186
BsnI GGCC 1 cut(s) 186
BspANI GGCC 1 cut(s) 186
BspCNI CTCAG 1 cut(s) 165
BsrI ACTGG 2 cut(s) 179, 262
BssECI CCNNGG 1 cut(s) 187
Bst2UI CCWGG 2 cut(s) 104, 188
Bst6I CTCTTC 1 cut(s) 81
BstAPI GCANNNNNTGC 1 cut(s) 14
BstDEI CTNAG 1 cut(s) 152
BstF5I GGATG 1 cut(s) 99
BstMWI GCNNNNNNNGC 2 cut(s) 14, 68
BstNI CCWGG 2 cut(s) 104, 188
BstSCI CCNGG 2 cut(s) 102, 186
BstV2I GAAGAC 1 cut(s) 216
BsuRI GGCC 1 cut(s) 186
BtsCI GGATG 1 cut(s) 99
CviAII CATG 1 cut(s) 59
CviJI RGCY 2 cut(s) 110, 186
CviKI_1 RGCY 2 cut(s) 110, 186
DdeI CTNAG 1 cut(s) 152
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
Eco57I CTGAAG 2 cut(s) 42, 96
EcoRII CCWGG 2 cut(s) 102, 186
FaeI CATG 1 cut(s) 62
FaiI YATR 2 cut(s) 53, 60
FatI CATG 1 cut(s) 58
FokI GGATG 1 cut(s) 86
HaeIII GGCC 1 cut(s) 186
Hin1II CATG 1 cut(s) 62
HinfI GANTC 1 cut(s) 232
Hpy188I TCNGA 4 cut(s) 115, 140, 164, 231
HpyCH4V TGCA 1 cut(s) 8
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 68
HpyF3I CTNAG 1 cut(s) 152
Hsp92II CATG 1 cut(s) 62
LpnPI CCDG 5 cut(s) 89, 116, 160, 173, 200
MaeIII GTNAC 1 cut(s) 95
MboII GAAGA 2 cut(s) 98, 216
MluCI AATT 5 cut(s) 126, 133, 158, 200, 212
MnlI CCTC 1 cut(s) 213
MseI TTAA 3 cut(s) 129, 203, 248
MslI CAYNNNNRTG 1 cut(s) 104
MspR9I CCNGG 2 cut(s) 104, 188
MvaI CCWGG 2 cut(s) 104, 188
MwoI GCNNNNNNNGC 2 cut(s) 14, 68
NlaIII CATG 1 cut(s) 62
PfeI GAWTC 1 cut(s) 232
PshBI ATTAAT 1 cut(s) 203
Psp6I CCWGG 2 cut(s) 102, 186
PspGI CCWGG 2 cut(s) 102, 186
RseI CAYNNNNRTG 1 cut(s) 104
SaqAI TTAA 3 cut(s) 129, 203, 248
ScrFI CCNGG 2 cut(s) 104, 188
SetI ASST 4 cut(s) 58, 97, 108, 224
SgeI CNNG 9 cut(s) 21, 71, 115, 116, 160, 181, 187, 199, 200
SmiMI CAYNNNNRTG 1 cut(s) 104
Sse9I AATT 5 cut(s) 126, 133, 158, 200, 212
StyD4I CCNGG 2 cut(s) 102, 186
TasI AATT 5 cut(s) 126, 133, 158, 200, 212
TfiI GAWTC 1 cut(s) 232
Tru1I TTAA 3 cut(s) 129, 203, 248
Tru9I TTAA 3 cut(s) 129, 203, 248
VspI ATTAAT 1 cut(s) 203
XapI RAATTY 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.