Prupe.1G203400_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
20247120 .. 20247649
530 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G203400.1

Sequence Viewer

Length: 240 bp
ATGAAGATGAATTTCCTAAAGAATAATAGCACCATTTTGATTGTTTTGGTGATCCTCTCGGTGGCCTTTTTGAGCAATCATGGGGTTGAGGCAACAAGAGTGTTGCAAGAGGACTTTGCTCATGCTAATCACCTTCAAACACACTACCCTCCCTCTGTCTACCAAACCGCAAAGAACACCATGGCCTGTTGGCTCCAAAGATTGGCTTCTGGGCCTAGCCCTAGAGGCAGTGGTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

80

Amino Acids

8.76

Weight (kDa)

9.51

Isoelectric Point (pI)

56.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccI GTMKAC 1 cut(s) 159
AciI CCGC 1 cut(s) 168
AclWI GGATC 1 cut(s) 46
AcsI RAATTY 1 cut(s) 10
AfiI CCNNNNNNNGG 2 cut(s) 61, 202
AgsI TTSAA 1 cut(s) 137
AlwI GGATC 1 cut(s) 46
AoxI GGCC 3 cut(s) 63, 183, 212
ApoI RAATTY 1 cut(s) 10
AspS9I GGNCC 1 cut(s) 212
AsuHPI GGTGA 2 cut(s) 61, 122
BfaI CTAG 3 cut(s) 216, 222, 238
BglI GCCNNNNNGGC 1 cut(s) 225
BmgT120I GGNCC 1 cut(s) 212
BmiI GGNNCC 1 cut(s) 194
BsaJI CCNNGG 1 cut(s) 180
Bsc4I CCNNNNNNNGG 2 cut(s) 61, 202
BseDI CCNNGG 1 cut(s) 180
BseLI CCNNNNNNNGG 2 cut(s) 61, 202
BshFI GGCC 3 cut(s) 65, 185, 214
BslI CCNNNNNNNGG 2 cut(s) 61, 202
BsnI GGCC 3 cut(s) 65, 185, 214
Bsp143I GATC 1 cut(s) 51
Bsp19I CCATGG 1 cut(s) 180
BspACI CCGC 1 cut(s) 168
BspANI GGCC 3 cut(s) 65, 185, 214
BspLI GGNNCC 1 cut(s) 194
BspPI GGATC 1 cut(s) 46
BssECI CCNNGG 1 cut(s) 180
BssMI GATC 1 cut(s) 51
BssT1I CCWWGG 1 cut(s) 180
BstDSI CCRYGG 1 cut(s) 180
BstKTI GATC 1 cut(s) 54
BstMBI GATC 1 cut(s) 51
BstMWI GCNNNNNNNGC 1 cut(s) 225
BsuRI GGCC 3 cut(s) 65, 185, 214
BtgI CCRYGG 1 cut(s) 180
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 1 cut(s) 235
Cfr13I GGNCC 1 cut(s) 212
CviAII CATG 3 cut(s) 80, 122, 181
CviJI RGCY 6 cut(s) 65, 185, 193, 206, 214, 219
CviKI_1 RGCY 6 cut(s) 65, 185, 193, 206, 214, 219
DpnI GATC 1 cut(s) 53
DpnII GATC 1 cut(s) 51
Eco130I CCWWGG 1 cut(s) 180
EcoT14I CCWWGG 1 cut(s) 180
ErhI CCWWGG 1 cut(s) 180
FaeI CATG 3 cut(s) 83, 125, 184
FaiI YATR 3 cut(s) 81, 123, 182
FalI AAGNNNNNCTT 2 cut(s) 190, 222
FatI CATG 3 cut(s) 79, 121, 180
FblI GTMKAC 1 cut(s) 159
FspBI CTAG 3 cut(s) 216, 222, 238
HaeIII GGCC 3 cut(s) 65, 185, 214
Hin1II CATG 3 cut(s) 83, 125, 184
HphI GGTGA 2 cut(s) 61, 122
Hpy166II GTNNAC 1 cut(s) 160
Hpy8I GTNNAC 1 cut(s) 160
HpyAV CCTTC 1 cut(s) 143
HpyCH4V TGCA 1 cut(s) 106
HpyF10VI GCNNNNNNNGC 1 cut(s) 225
Hsp92II CATG 3 cut(s) 83, 125, 184
Kzo9I GATC 1 cut(s) 51
LmnI GCTCC 1 cut(s) 198
LpnPI CCDG 2 cut(s) 195, 199
MaeI CTAG 3 cut(s) 216, 222, 238
MaeIII GTNAC 1 cut(s) 233
MalI GATC 1 cut(s) 53
MboI GATC 1 cut(s) 51
MboII GAAGA 1 cut(s) 16
MluCI AATT 1 cut(s) 10
MnlI CCTC 6 cut(s) 65, 82, 103, 159, 163, 218
MwoI GCNNNNNNNGC 1 cut(s) 225
NcoI CCATGG 1 cut(s) 180
NdeII GATC 1 cut(s) 51
NlaIII CATG 3 cut(s) 83, 125, 184
NlaIV GGNNCC 1 cut(s) 194
NmuCI GTSAC 1 cut(s) 233
PflMI CCANNNNNTGG 1 cut(s) 202
PspN4I GGNNCC 1 cut(s) 194
PspPI GGNCC 1 cut(s) 212
Sau3AI GATC 1 cut(s) 51
Sau96I GGNCC 1 cut(s) 212
SetI ASST 1 cut(s) 135
Sse9I AATT 1 cut(s) 10
SsiI CCGC 1 cut(s) 168
SspMI CTAG 3 cut(s) 216, 222, 238
StyI CCWWGG 1 cut(s) 180
TasI AATT 1 cut(s) 10
TscAI CASTG 1 cut(s) 235
TseFI GTSAC 1 cut(s) 233
Tsp45I GTSAC 1 cut(s) 233
TspDTI ATGAA 2 cut(s) 17, 23
TspRI CASTG 1 cut(s) 235
Van91I CCANNNNNTGG 1 cut(s) 202
XapI RAATTY 1 cut(s) 10
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 3 cut(s) 216, 222, 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.